Psyllid ID: psy13106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccEEEccEEcccccEEEEEEEEcccccEEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccEEEEEEccccccHEEEEEEEcccccEEEEEEEEcHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccEEccc
Coil and Loop (DISEMBL)
mplfgkkdSAKKLKkdgkdneikgpsiEEKYILKELLgtgafsevrlaesrenGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNrldetndnnsndkdkerlthpnIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR
Flexible Loop (DISEMBL)
mplfgkkdsakklkkdgkdneikgpsieeKYILKELLGTGAFSEVRLaesrengtmFAVKIIDkkalkgkedslENEIKVLRRFsqsvhnrldetndnnsndkdkerlthPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGsytekdasMLIRQVLEAVDYMHEARYLSKPR
Low Complexity Region (SEG)
MPLFGkkdsakklkkdgkdneikGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR
Disordered region (IsUnstruct)
*****************************KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA********************************************PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR******
Disordered Region (DISOPRED)
****************************EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP*
Disordered Region (DISEMBL)
******************DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR
Disordered Region (DISPRO)
*************************SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
A8X6H4	344	Calcium/calmodulin-depend	N/A	N/A	0.768	0.395	0.552	8e-41
Q9TXJ0	348	Calcium/calmodulin-depend	yes	N/A	0.768	0.390	0.547	1e-40
Q8BW96	385	Calcium/calmodulin-depend	yes	N/A	0.734	0.337	0.509	4e-34
Q8IU85	385	Calcium/calmodulin-depend	yes	N/A	0.734	0.337	0.509	6e-34
Q9QYK9	343	Calcium/calmodulin-depend	no	N/A	0.666	0.344	0.514	9e-31
O70150	343	Calcium/calmodulin-depend	no	N/A	0.666	0.344	0.514	1e-30
Q6P2M8	343	Calcium/calmodulin-depend	no	N/A	0.666	0.344	0.514	2e-30
Q91YS8	374	Calcium/calmodulin-depend	no	N/A	0.672	0.318	0.489	5e-30
Q63450	374	Calcium/calmodulin-depend	no	N/A	0.672	0.318	0.489	5e-30
Q14012	370	Calcium/calmodulin-depend	no	N/A	0.672	0.321	0.482	2e-29

>sp|A8X6H4|CMK1_CAEBR Calcium/calmodulin-dependent protein kinase type 1 OS=Caenorhabditis briggsae GN=cmk-1 PE=3 SV=3

 Score =  166 bits (420), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/170 (55%), Positives = 113/170 (66%), Gaps = 34/170 (20%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLF ++D          +      SI EKY  +++LGTGAFS+V LAES+ + G ++AV
Sbjct: 1   MPLFKRRDV---------NTPAPTSSIREKYDFRDVLGTGAFSKVFLAESKTDVGQLYAV 51

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           K IDKKALKGKE+SLENEIKVLR+                        L H NIVQL ET
Sbjct: 52  KCIDKKALKGKEESLENEIKVLRK------------------------LRHNNIVQLFET 87

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +++K  VYLVMELVTGGELFDRIV KGSYTE+DAS LIRQVLEAV +MH+
Sbjct: 88  YDEKQFVYLVMELVTGGELFDRIVAKGSYTEQDASNLIRQVLEAVSFMHD 137

Calcium/calmodulin-dependent protein kinase belonging to a calcium-triggered signaling cascade which results in transcriptional activation, at least in part through phosphorylation of crh-1. Regulates gene expression, sensory morphology, and function of the AFD thermosensory neurons.
Caenorhabditis briggsae (taxid: 6238)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 7

>sp|Q9TXJ0|CMK1_CAEEL Calcium/calmodulin-dependent protein kinase type 1 OS=Caenorhabditis elegans GN=cmk-1 PE=1 SV=1

 Score =  166 bits (419), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 113/170 (66%), Gaps = 34/170 (20%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLF ++D +               +I EKY  +++LGTGAFS+V LAES+ + G M+AV
Sbjct: 1   MPLFKRRDGS---------GPAPNATIREKYDFRDVLGTGAFSKVFLAESKSDAGQMYAV 51

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           K IDKKALKGKE+SLENEIKVLR+                        L H NIVQL +T
Sbjct: 52  KCIDKKALKGKEESLENEIKVLRK------------------------LRHNNIVQLFDT 87

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +++K  VYLVMELVTGGELFDRIV KGSYTE+DAS LIRQVLEAV +MH+
Sbjct: 88  YDEKQFVYLVMELVTGGELFDRIVAKGSYTEQDASNLIRQVLEAVGFMHD 137

Calcium/calmodulin-dependent protein kinase belonging to a calcium-triggered signaling cascade which results in transcriptional activation, at least in part through phosphorylation of crh-1. Regulates gene expression, sensory morphology, and function of the AFD thermosensory neurons.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q8BW96|KCC1D_MOUSE Calcium/calmodulin-dependent protein kinase type 1D OS=Mus musculus GN=Camk1d PE=1 SV=2

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 101/161 (62%), Gaps = 31/161 (19%)

Query: 8   DSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL 67
           +S+   KK  +D       I++ +  KE LGTGAFSEV LAE +  G +FAVK I KKAL
Sbjct: 7   ESSSSWKKQAED-------IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 59

Query: 68  KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVY 127
           KGKE S+ENEI VLR+                        + H NIV L + +E  + +Y
Sbjct: 60  KGKESSIENEIAVLRK------------------------IKHENIVALEDIYESPNHLY 95

Query: 128 LVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           LVM+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV Y+H
Sbjct: 96  LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 136

Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, activates CREB-dependent gene transcription, regulates calcium-mediated granulocyte function and respiratory burst and promotes basal dendritic growth of hippocampal neurons. In neutrophil cells, required for cytokine-induced proliferative responses and activation of the respiratory burst. Phosphorylates the transcription activator CREB1 on 'Ser-133' in hippocampal neuron nuclei. May play a role in apoptosis of erythroleukemia cells. In vitro, phosphorylates transcription factor CREM isoform Beta (By similarity). Isoform 1 but not isoform 2 activates CREB1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q8IU85|KCC1D_HUMAN Calcium/calmodulin-dependent protein kinase type 1D OS=Homo sapiens GN=CAMK1D PE=1 SV=1

 Score =  143 bits (360), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 101/161 (62%), Gaps = 31/161 (19%)

Query: 8   DSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL 67
           +S+   KK  +D       I++ +  KE LGTGAFSEV LAE +  G +FAVK I KKAL
Sbjct: 7   ESSSSWKKQAED-------IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 59

Query: 68  KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVY 127
           KGKE S+ENEI VLR+                        + H NIV L + +E  + +Y
Sbjct: 60  KGKESSIENEIAVLRK------------------------IKHENIVALEDIYESPNHLY 95

Query: 128 LVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           LVM+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV Y+H
Sbjct: 96  LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 136

Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, activates CREB-dependent gene transcription, regulates calcium-mediated granulocyte function and respiratory burst and basal dendritic growth of hippocampal neurons. In neutrophil cells, required for cytokine-induced proliferative responses and activation of the respiratory burst. Phosphorylates the transcription activator CREB1 on 'Ser-133' in hippocampal neuron nuclei. May play a role in apoptosis of erythroleukemia cells. In vitro, phosphorylates transcription factor CREM isoform Beta.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q9QYK9|KCC1B_MOUSE Calcium/calmodulin-dependent protein kinase type 1B OS=Mus musculus GN=Pnck PE=2 SV=1

 Score =  132 bits (333), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 24/142 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I   Y ++E LG+GAFSEV LA+ R +  + A+K I KKAL+GKE  +ENEI VLRR S 
Sbjct: 11  ISSVYEIREKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRIS- 69

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HPNIV L +  E    +YL MELVTGGELFDRI+E+G
Sbjct: 70  -----------------------HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERG 106

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
           SYTEKDAS L+ QVL AV Y+H
Sbjct: 107 SYTEKDASHLVGQVLGAVSYLH 128

Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade. In vitro phosphorylates CREB1 and SYN1/synapsin I. Phosphorylates and activates CAMK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|O70150|KCC1B_RAT Calcium/calmodulin-dependent protein kinase type 1B OS=Rattus norvegicus GN=Pnck PE=2 SV=1

 Score =  132 bits (332), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 24/142 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I   Y ++E LG+GAFSEV LA+ R +  + A+K I KKAL+GKE  +ENEI VLRR S 
Sbjct: 11  ISSVYEIREKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRIS- 69

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HPNIV L +  E    +YL MELVTGGELFDRI+E+G
Sbjct: 70  -----------------------HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERG 106

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
           SYTEKDAS L+ QVL AV Y+H
Sbjct: 107 SYTEKDASHLVGQVLGAVSYLH 128

Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade. In vitro, isoform 1 and isoform 2 phosphorylate CREB1, SYN1/synapsin I. Phosphorylates and activates CAMK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q6P2M8|KCC1B_HUMAN Calcium/calmodulin-dependent protein kinase type 1B OS=Homo sapiens GN=PNCK PE=2 SV=2

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 24/142 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I   Y ++E LG+GAFSEV LA+ R +  + A+K I KKAL+GKE  +ENEI VLRR S 
Sbjct: 11  ISSVYEIRERLGSGAFSEVVLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRIS- 69

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HPNIV L +  E    +YL MELVTGGELFDRI+E+G
Sbjct: 70  -----------------------HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERG 106

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
           SYTEKDAS L+ QVL AV Y+H
Sbjct: 107 SYTEKDASHLVGQVLGAVSYLH 128

Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade. In vitro phosphorylates CREB1 and SYN1/synapsin I. Phosphorylates and activates CAMK1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q91YS8|KCC1A_MOUSE Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1

 Score =  130 bits (327), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I KKAL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK--- 72

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-673', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation. Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-276' and 'Ser-295'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation. Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q63450|KCC1A_RAT Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2

 Score =  130 bits (326), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I KKAL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK--- 72

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-516', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation (By similarity). Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-275' and 'Ser-294'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation (By similarity). Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q14012|KCC1A_HUMAN Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1

 Score =  128 bits (322), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I K+AL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK--- 72

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-694', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation. Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-276' and 'Ser-295'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation (By similarity). Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
157129371	376	calcium/calmodulin-dependent protein kin	0.892	0.420	0.745	2e-63
357630382	359	calcium/calmodulin-dependent protein kin	0.887	0.437	0.732	2e-61
312382920	441	hypothetical protein AND_04167 [Anophele	0.932	0.374	0.712	2e-60
158287057	408	AGAP005306-PA [Anopheles gambiae str. PE	0.937	0.406	0.711	3e-60
332023811	403	Calcium/calmodulin-dependent protein kin	0.943	0.414	0.758	4e-59
307204034	379	Calcium/calmodulin-dependent protein kin	0.943	0.440	0.758	5e-59
307180417	409	Calcium/calmodulin-dependent protein kin	0.943	0.408	0.758	8e-59
195064384	430	GH24012 [Drosophila grimshawi] gi|193892	0.903	0.372	0.729	7e-58
195172554	417	GL18141 [Drosophila persimilis] gi|19846	0.903	0.383	0.717	2e-57
194768322	407	GF22801 [Drosophila ananassae] gi|190618	0.892	0.388	0.726	2e-57

>gi|157129371|ref|XP_001661659.1| calcium/calmodulin-dependent protein kinase type 1 (camki) [Aedes aegypti] gi|108872255|gb|EAT36480.1| AAEL011441-PA [Aedes aegypti]

 Score =  246 bits (629), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/169 (74%), Positives = 136/169 (80%), Gaps = 11/169 (6%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           MPLFGKKDS KK++KD K+ E K P IE+KY++KELLGTGAFSEVRL E RE G  FAVK
Sbjct: 1   MPLFGKKDSGKKVRKDAKEIE-KQPCIEDKYVIKELLGTGAFSEVRLCEHRETGQAFAVK 59

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
           IIDKKALKGKEDSLENEI+VL+RFS               ND DK   THPNIVQL ET+
Sbjct: 60  IIDKKALKGKEDSLENEIRVLKRFSAK----------RQENDPDKTWFTHPNIVQLFETY 109

Query: 121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           EDK KVYL+MELVTGGELFDRIVEKGSYTEKDAS LIRQVLEAVDYMHE
Sbjct: 110 EDKSKVYLIMELVTGGELFDRIVEKGSYTEKDASYLIRQVLEAVDYMHE 158

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357630382|gb|EHJ78543.1| calcium/calmodulin-dependent protein kinase type 1 [Danaus plexippus]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 142/168 (84%), Gaps = 11/168 (6%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           MPLFGKKD  +K KKDGK++E K PSIE+KY++K+LLGTGAFSEVRL ES+ENG +FA K
Sbjct: 1   MPLFGKKDFGRKSKKDGKESE-KQPSIEDKYVVKDLLGTGAFSEVRLIESKENGQLFACK 59

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
           IIDKKALKGKEDSLENEI+VL++FS+          +  S   DK+  +HPNIVQL+ET+
Sbjct: 60  IIDKKALKGKEDSLENEIRVLKKFSE----------NEKSEGGDKKMFSHPNIVQLLETY 109

Query: 121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           EDK+KVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQVLEAVDYMH
Sbjct: 110 EDKNKVYLVMELVTGGELFDRIVEKGSYTEKDASNLIRQVLEAVDYMH 157

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312382920|gb|EFR28197.1| hypothetical protein AND_04167 [Anopheles darlingi]

 Score =  236 bits (602), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/174 (71%), Positives = 137/174 (78%), Gaps = 9/174 (5%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           MPLFGKKDS KK++K+ K+   K PSI+EKY++KELLGTGAFSEVRL E RE    +AVK
Sbjct: 30  MPLFGKKDSGKKVRKETKEGCEKQPSIDEKYVIKELLGTGAFSEVRLCEHRETAQQYAVK 89

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN-----NSNDKDKERLTHPNIVQ 115
           IIDKKALKGKEDSLENEI+VL+RFS     R D T           DK   R  HPNIVQ
Sbjct: 90  IIDKKALKGKEDSLENEIRVLKRFSA---RRSDGTGVGIGPLPGQTDK-PPRFAHPNIVQ 145

Query: 116 LIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           L+ETFEDK KVYL+MELVTGGELFDRIVEKGSYTE+DAS LIRQVLEAVDYMHE
Sbjct: 146 LLETFEDKSKVYLIMELVTGGELFDRIVEKGSYTERDASNLIRQVLEAVDYMHE 199

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287057|ref|XP_309099.4| AGAP005306-PA [Anopheles gambiae str. PEST] gi|157019832|gb|EAA04816.4| AGAP005306-PA [Anopheles gambiae str. PEST]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 121/170 (71%), Positives = 136/170 (80%), Gaps = 4/170 (2%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           MPLFGKKDS KK++KD KD   K P+I++KY++KELLGTGAFSEVRL E RE    +AVK
Sbjct: 1   MPLFGKKDSGKKIRKDVKDGCDKLPNIDDKYVIKELLGTGAFSEVRLCEHRETAQQYAVK 60

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK-DKERLTHPNIVQLIET 119
           IIDKKALKGKEDSLENEI+VL+RFS     R D +    +       R  HPNIVQL+ET
Sbjct: 61  IIDKKALKGKEDSLENEIRVLKRFSA---RRSDGSGVQTAAPPIGGPRFAHPNIVQLLET 117

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           FEDK KVYL+MELVTGGELFDRIVEKGSYTE+DAS LIRQVLEAVDYMHE
Sbjct: 118 FEDKSKVYLIMELVTGGELFDRIVEKGSYTERDASNLIRQVLEAVDYMHE 167

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023811|gb|EGI64035.1| Calcium/calmodulin-dependent protein kinase type 1 [Acromyrmex echinatior]

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/170 (75%), Positives = 144/170 (84%), Gaps = 3/170 (1%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLFGKKD+ KK+KK     + + PS+E+KYILK+LLGTGAFSEVRLAES+E  G MFAV
Sbjct: 1   MPLFGKKDTNKKIKK--DGKDDRSPSVEDKYILKDLLGTGAFSEVRLAESKEKPGQMFAV 58

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           KIIDKKALKGKEDSLENEIKVLRRFS+S   +    +  + +  +K  LTHPNIVQL+ET
Sbjct: 59  KIIDKKALKGKEDSLENEIKVLRRFSESATPQSGGGSLKSDSSGEKRWLTHPNIVQLLET 118

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQVLEAVDYMHE
Sbjct: 119 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASGLIRQVLEAVDYMHE 168

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204034|gb|EFN82938.1| Calcium/calmodulin-dependent protein kinase type 1D [Harpegnathos saltator]

 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/170 (75%), Positives = 147/170 (86%), Gaps = 3/170 (1%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLFGKKDS KK+KK     + + PS+E+KYILK+LLGTGAFSEVRLAES+E  G MFAV
Sbjct: 1   MPLFGKKDSNKKIKK--DGKDDRSPSVEDKYILKDLLGTGAFSEVRLAESKEKPGQMFAV 58

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           KIIDKKALKGKEDSLENEIKVLRRFS+SV  +  + +  + +  +++ LTHPNIVQL+ET
Sbjct: 59  KIIDKKALKGKEDSLENEIKVLRRFSESVTPQSGDGSLKSDSSGERKWLTHPNIVQLLET 118

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQVLEAVDYMH+
Sbjct: 119 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASGLIRQVLEAVDYMHD 168

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180417|gb|EFN68443.1| Calcium/calmodulin-dependent protein kinase type 1D [Camponotus floridanus]

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 129/170 (75%), Positives = 144/170 (84%), Gaps = 3/170 (1%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLFGKKDS KK+KK     + + PS+E+KY+LK+LLGTGAFSEVRLAES+E  G MFAV
Sbjct: 1   MPLFGKKDSNKKMKK--DGKDDRSPSVEDKYVLKDLLGTGAFSEVRLAESKEKPGQMFAV 58

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           KIIDKKALKGKEDSLENEIKVLRRFS+S   +    +  + +  +K  LTHPNIVQL+ET
Sbjct: 59  KIIDKKALKGKEDSLENEIKVLRRFSESATPQSGGGSLRSDSSGEKRWLTHPNIVQLLET 118

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQVLEAVDYMHE
Sbjct: 119 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASGLIRQVLEAVDYMHE 168

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195064384|ref|XP_001996559.1| GH24012 [Drosophila grimshawi] gi|193892105|gb|EDV90971.1| GH24012 [Drosophila grimshawi]

 Score =  228 bits (581), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 124/170 (72%), Positives = 133/170 (78%), Gaps = 10/170 (5%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLFGKKDS KK K        K  SIEEKY L  LLGTGAFSEVRLAES+E+ G  FAV
Sbjct: 1   MPLFGKKDSGKKAKSKDLKELNKQVSIEEKYNLHGLLGTGAFSEVRLAESKESPGDHFAV 60

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           KIIDKKALKGKE+SLENEI+VLRRFS          N  + N  +  RLTHPNIVQL+ET
Sbjct: 61  KIIDKKALKGKEESLENEIRVLRRFS---------ANHFDGNSPNGTRLTHPNIVQLLET 111

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +EDK KVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQ+LEAVDYMHE
Sbjct: 112 YEDKAKVYLVMELVTGGELFDRIVEKGSYTEKDASHLIRQILEAVDYMHE 161

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195172554|ref|XP_002027062.1| GL18141 [Drosophila persimilis] gi|198462039|ref|XP_001352320.2| GA13377 [Drosophila pseudoobscura pseudoobscura] gi|194112840|gb|EDW34883.1| GL18141 [Drosophila persimilis] gi|198139922|gb|EAL29266.2| GA13377 [Drosophila pseudoobscura pseudoobscura]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/170 (71%), Positives = 133/170 (78%), Gaps = 10/170 (5%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
           MPLFGKKDS KK K        K  SIEEKY L  LLGTGAFSEVRLAES++  G  FAV
Sbjct: 1   MPLFGKKDSGKKAKSKDMKELSKQVSIEEKYNLHGLLGTGAFSEVRLAESKDTPGDHFAV 60

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           KIIDKKALKGKE+SLENEI+VLRRFS          N  ++N  +  RLTHPNIVQL+ET
Sbjct: 61  KIIDKKALKGKEESLENEIRVLRRFS---------ANHFDANCPNGTRLTHPNIVQLLET 111

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +EDK KVYLVMELVTGGELFDRIVEKGSYTE+DAS LIRQ+LEAVDYMHE
Sbjct: 112 YEDKSKVYLVMELVTGGELFDRIVEKGSYTERDASHLIRQILEAVDYMHE 161

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194768322|ref|XP_001966261.1| GF22801 [Drosophila ananassae] gi|190618563|gb|EDV34087.1| GF22801 [Drosophila ananassae]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 136/172 (79%), Gaps = 14/172 (8%)

Query: 1   MPLFGKKDSAKKLKKDGKDNE--IKGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMF 57
           MPLFGKKDS KK K   KDN+   K  SIEEKY L  LLGTGAFSEVRLAES++  G  +
Sbjct: 1   MPLFGKKDSGKKAK--AKDNKELNKQVSIEEKYNLHGLLGTGAFSEVRLAESKDTPGVHY 58

Query: 58  AVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI 117
           AVKIIDKKALKGKE+SLENEI+VLRRFS          N  ++N     RLTHPNIVQL+
Sbjct: 59  AVKIIDKKALKGKEESLENEIRVLRRFS---------ANQYDANCPKGTRLTHPNIVQLL 109

Query: 118 ETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           ETFEDK KVYLVMELVTGGELFDRIVEKGSYTEKDAS L+RQ+LEAVDYMHE
Sbjct: 110 ETFEDKLKVYLVMELVTGGELFDRIVEKGSYTEKDASHLVRQILEAVDYMHE 161

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
FB|FBgn0016126	405	CaMKI "Calcium/calmodulin-depe	0.903	0.395	0.682	4.1e-49
ZFIN|ZDB-GENE-080402-7	433	camk1da "calcium/calmodulin-de	0.350	0.143	0.645	7.3e-34
UNIPROTKB|F1PD00	385	CAMK1D "Uncharacterized protei	0.350	0.161	0.661	6.3e-33
UNIPROTKB|Q8IU85	385	CAMK1D "Calcium/calmodulin-dep	0.350	0.161	0.661	8.1e-33
MGI|MGI:2442190	385	Camk1d "calcium/calmodulin-dep	0.350	0.161	0.661	8.1e-33
UNIPROTKB|E2QWM5	369	CAMK1 "Uncharacterized protein	0.355	0.170	0.619	1.5e-29
UNIPROTKB|C9IYV2	245	CAMK1G "Calcium/calmodulin-dep	0.361	0.261	0.593	1.1e-27
ZFIN|ZDB-GENE-030131-7594	426	camk1ga "calcium/calmodulin-de	0.361	0.150	0.593	3.1e-27
RGD|621800	476	Camk1g "calcium/calmodulin-dep	0.361	0.134	0.609	6.8e-27
MGI|MGI:2388073	477	Camk1g "calcium/calmodulin-dep	0.361	0.134	0.609	6.9e-27

FB|FBgn0016126 CaMKI "Calcium/calmodulin-dependent protein kinase I" [Drosophila melanogaster (taxid:7227)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 116/170 (68%), Positives = 125/170 (73%)

Query:     1 MPLFGXXXXXXXXXXXXXXXXXXGPSIEEKYILKELLGTGAFSEVRLAESREN-GTMFAV 59
             MPLFG                    SIEEKY L  LLGTGAFSEVRLAES+++ G  FAV
Sbjct:     1 MPLFGKKDSGKKAKAKDLKELNKQVSIEEKYNLHGLLGTGAFSEVRLAESKDSPGEHFAV 60

Query:    60 KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
             KIIDKKALKGKE+SLENEI+VLRRFS    N  D    N +      RLTHPNIVQL+ET
Sbjct:    61 KIIDKKALKGKEESLENEIRVLRRFSA---NHFDGKCLNGT------RLTHPNIVQLLET 111

Query:   120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +EDK KVYLVMELVTGGELFDRIVEKGSYTEKDAS LIRQ+LEAVDYMHE
Sbjct:   112 YEDKSKVYLVMELVTGGELFDRIVEKGSYTEKDASHLIRQILEAVDYMHE 161

GO:0005829 "cytosol" evidence=ISS

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;NAS

GO:0005516 "calmodulin binding" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-080402-7 camk1da "calcium/calmodulin-dependent protein kinase 1Da" [Danio rerio (taxid:7955)]

 Score = 211 (79.3 bits), Expect = 7.3e-34, Sum P(2) = 7.3e-34
 Identities = 40/62 (64%), Positives = 51/62 (82%)

Query:   107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
             ++ H NIV L + +E    +YL+M+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV+Y
Sbjct:    77 KIKHENIVALEDIYESSDHLYLIMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVNY 136

Query:   167 MH 168
             +H
Sbjct:   137 LH 138

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|F1PD00 CAMK1D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 209 (78.6 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
 Identities = 41/62 (66%), Positives = 51/62 (82%)

Query:   107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
             ++ H NIV L + +E  + +YLVM+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV Y
Sbjct:    75 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 134

Query:   167 MH 168
             +H
Sbjct:   135 LH 136

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q8IU85 CAMK1D "Calcium/calmodulin-dependent protein kinase type 1D" [Homo sapiens (taxid:9606)]

 Score = 209 (78.6 bits), Expect = 8.1e-33, Sum P(2) = 8.1e-33
 Identities = 41/62 (66%), Positives = 51/62 (82%)

Query:   107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
             ++ H NIV L + +E  + +YLVM+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV Y
Sbjct:    75 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 134

Query:   167 MH 168
             +H
Sbjct:   135 LH 136

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0005954 "calcium- and calmodulin-dependent protein kinase complex" evidence=TAS

GO:0060267 "positive regulation of respiratory burst" evidence=IMP

GO:0050766 "positive regulation of phagocytosis" evidence=IMP

GO:0071622 "regulation of granulocyte chemotaxis" evidence=IMP

GO:0050773 "regulation of dendrite development" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0032793 "positive regulation of CREB transcription factor activity" evidence=IDA

GO:0010976 "positive regulation of neuron projection development" evidence=ISS

GO:0090023 "positive regulation of neutrophil chemotaxis" evidence=ISS

MGI|MGI:2442190 Camk1d "calcium/calmodulin-dependent protein kinase ID" [Mus musculus (taxid:10090)]

 Score = 209 (78.6 bits), Expect = 8.1e-33, Sum P(2) = 8.1e-33
 Identities = 41/62 (66%), Positives = 51/62 (82%)

Query:   107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
             ++ H NIV L + +E  + +YLVM+LV+GGELFDRIVEKG YTEKDAS LIRQVL+AV Y
Sbjct:    75 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 134

Query:   167 MH 168
             +H
Sbjct:   135 LH 136

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISO

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006954 "inflammatory response" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032793 "positive regulation of CREB transcription factor activity" evidence=ISO

GO:0042981 "regulation of apoptotic process" evidence=IDA

GO:0050766 "positive regulation of phagocytosis" evidence=ISO

GO:0050773 "regulation of dendrite development" evidence=ISO

GO:0060267 "positive regulation of respiratory burst" evidence=ISO

GO:0071622 "regulation of granulocyte chemotaxis" evidence=ISO

GO:0090023 "positive regulation of neutrophil chemotaxis" evidence=IMP

UNIPROTKB|E2QWM5 CAMK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 204 (76.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
 Identities = 39/63 (61%), Positives = 51/63 (80%)

Query:   107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
             ++ HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG YTE+DAS LI QVL+AV Y
Sbjct:    71 QIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 130

Query:   167 MHE 169
             +H+
Sbjct:   131 LHD 133

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=IEA

GO:0060999 "positive regulation of dendritic spine development" evidence=IEA

GO:0051835 "positive regulation of synapse structural plasticity" evidence=IEA

GO:0051149 "positive regulation of muscle cell differentiation" evidence=IEA

GO:0046827 "positive regulation of protein export from nucleus" evidence=IEA

GO:0043393 "regulation of protein binding" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|C9IYV2 CAMK1G "Calcium/calmodulin-dependent protein kinase type 1G" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 38/64 (59%), Positives = 51/64 (79%)

Query:   106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVD 165
             +++ H NIV L + +E     YLVM+LV+GGELFDRI+E+G YTEKDAS++I+QVL AV 
Sbjct:    73 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 132

Query:   166 YMHE 169
             Y+HE
Sbjct:   133 YLHE 136

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-030131-7594 camk1ga "calcium/calmodulin-dependent protein kinase IGa" [Danio rerio (taxid:7955)]

 Score = 202 (76.2 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
 Identities = 38/64 (59%), Positives = 51/64 (79%)

Query:   106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVD 165
             +R+ H N+V L + +E +   YLVMELV+GGELFDRI+++G YTEKDAS +I QVLEAV 
Sbjct:    70 KRIKHSNVVGLEDFYESRTHYYLVMELVSGGELFDRILDRGVYTEKDASRVINQVLEAVS 129

Query:   166 YMHE 169
             Y+H+
Sbjct:   130 YLHQ 133

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

RGD|621800 Camk1g "calcium/calmodulin-dependent protein kinase IG" [Rattus norvegicus (taxid:10116)]

 Score = 203 (76.5 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query:   106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVD 165
             +R+ H NIV L + +E     YLVM+LV+GGELFDRI+E+G YTEKDAS++I+QVL AV 
Sbjct:    73 KRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 132

Query:   166 YMHE 169
             Y+HE
Sbjct:   133 YLHE 136

GO:0000139 "Golgi membrane" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISO;IDA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0005954 "calcium- and calmodulin-dependent protein kinase complex" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0012505 "endomembrane system" evidence=ISO

GO:0019722 "calcium-mediated signaling" evidence=NAS

GO:0043005 "neuron projection" evidence=IDA

MGI|MGI:2388073 Camk1g "calcium/calmodulin-dependent protein kinase I gamma" [Mus musculus (taxid:10090)]

 Score = 203 (76.5 bits), Expect = 6.9e-27, Sum P(2) = 6.9e-27
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query:   106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVD 165
             +R+ H NIV L + +E     YLVM+LV+GGELFDRI+E+G YTEKDAS++I+QVL AV 
Sbjct:    73 KRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 132

Query:   166 YMHE 169
             Y+HE
Sbjct:   133 YLHE 136

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISO;IDA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005954 "calcium- and calmodulin-dependent protein kinase complex" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0012505 "endomembrane system" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0043005 "neuron projection" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IU85	KCC1D_HUMAN	2, ., 7, ., 1, 1, ., 1, 7	0.5093	0.7344	0.3376	yes	N/A
Q8BW96	KCC1D_MOUSE	2, ., 7, ., 1, 1, ., 1, 7	0.5093	0.7344	0.3376	yes	N/A
Q9TXJ0	CMK1_CAEEL	2, ., 7, ., 1, 1, ., 1, 7	0.5470	0.7683	0.3908	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	177
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-41
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-34
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-25
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-25
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-24
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-21
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-18
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-16
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-16
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-16
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-14
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-13
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-12
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	7e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-11
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-11
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	9e-11
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-11
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-10
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-10
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-10
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-10
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	4e-10
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-10
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-10
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-09
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-09
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-09
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-09
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-09
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	9e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-08
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	3e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-08
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	7e-08
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-08
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-07
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-07
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-07
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-07
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-07
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	5e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-05
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-05
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	7e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	7e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	9e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	6e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	6e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	7e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	8e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.001
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	0.001
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.001
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.001
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.002
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.002
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.003
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	0.003
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.004
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.004
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  138 bits (351), Expect = 2e-41
 Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 24/143 (16%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           Y + E LG G+F +V LA  ++ G + A+K+I KK +K   + +  EIK+L++       
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKK------- 53

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                            L HPNIV+L + FED+ K+YLVME   GG+LFD + ++G  +E
Sbjct: 54  -----------------LKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSE 96

Query: 151 KDASMLIRQVLEAVDYMHEARYL 173
            +A   +RQ+L A++Y+H    +
Sbjct: 97  DEARFYLRQILSALEYLHSKGIV 119

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  120 bits (302), Expect = 5e-34
 Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 25/142 (17%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQSVH 89
           Y L   LG+G+F  V  A+ +  G + AVKI+ K      K+ +   EI++LRR S    
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS---- 56

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                               HPNIV+LI+ FEDK  +YLVME   GG+LFD +   G  +
Sbjct: 57  --------------------HPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLS 96

Query: 150 EKDASMLIRQVLEAVDYMHEAR 171
           E +A  +  Q+L  ++Y+H   
Sbjct: 97  EDEAKKIALQILRGLEYLHSNG 118

Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 98.8 bits (247), Expect = 1e-25
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 25/140 (17%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSV 88
           +   +++G G+FS V LA+ +E    +A+KI+DK+ L  + K   ++ E +VL       
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVL------- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
             RL+                HP I++L  TF+D+  +Y V+E    GEL   I + GS 
Sbjct: 56  -TRLNG---------------HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSL 99

Query: 149 TEKDASMLIRQVLEAVDYMH 168
            EK       ++L A++Y+H
Sbjct: 100 DEKCTRFYAAEILLALEYLH 119

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 97.3 bits (243), Expect = 1e-25
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 25/134 (18%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G F  V LA  ++ G   A+KII K+      + L  EI++L++ +           
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN----------- 49

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASM 155
                        HPNIV+L   FED++ +YLVME   GG L D + E  G  +E +   
Sbjct: 50  -------------HPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILR 96

Query: 156 LIRQVLEAVDYMHE 169
           ++ Q+LE ++Y+H 
Sbjct: 97  ILLQILEGLEYLHS 110

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 93.8 bits (234), Expect = 7e-24
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 27/147 (18%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
           ++   ELLG G+F  V LA  ++ G + AVK ++      +E ++LE EI++L       
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS----- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLI--ETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                              L HPNIV+    E  E+K+ + + +E V+GG L   + + G
Sbjct: 56  -------------------LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG 96

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
              E       RQ+LE + Y+H    +
Sbjct: 97  KLPEPVIRKYTRQILEGLAYLHSNGIV 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 91.1 bits (227), Expect = 1e-22
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 26/145 (17%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGK-EDSLENEIKVLRRFSQSV 88
           +   + LGTG+F  V L   + +G  +A+KI+ K K +K K  + + NE ++L+      
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR--- 59

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HP +V L  +F+D   +YLVME V GGELF  + + G +
Sbjct: 60  ---------------------HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRF 98

Query: 149 TEKDASMLIRQVLEAVDYMHEARYL 173
            E  A     QV+ A++Y+H    +
Sbjct: 99  PEPVARFYAAQVVLALEYLHSLDIV 123

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 87.6 bits (218), Expect = 1e-21
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 26/135 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G+F +V L   ++ G ++A+K++ KK +  + + +    E  +L             
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNIL------------- 47

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                       R+ HP IV+L   F+ + K+YLV+E   GGELF  + ++G ++E+ A 
Sbjct: 48  -----------SRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERAR 96

Query: 155 MLIRQVLEAVDYMHE 169
               +++ A++Y+H 
Sbjct: 97  FYAAEIVLALEYLHS 111

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 86.8 bits (216), Expect = 3e-21
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 29/149 (19%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
           KY + + +G G+F +V L   + +G ++ +K ID   +  KE +   NE+K+L++     
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK----- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI----VE 144
                              L HPNI++  E+FE+K K+ +VME   GG+L  +I     E
Sbjct: 56  -------------------LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKE 96

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEARYL 173
              + E+       Q+  A+ Y+H  + L
Sbjct: 97  GKPFPEEQILDWFVQLCLALKYLHSRKIL 125

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 78.0 bits (193), Expect = 6e-18
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 26/135 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V L + +     FA+K + K+ +   G+++ + +E ++L             
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEIL------------- 47

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                      E   HP IV+L  TF+DK  +Y++ME   GGEL+  + ++G + E  A 
Sbjct: 48  -----------EECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTAR 96

Query: 155 MLIRQVLEAVDYMHE 169
             I  V+ A +Y+H 
Sbjct: 97  FYIACVVLAFEYLHN 111

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 76.1 bits (188), Expect = 3e-17
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 26/143 (18%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
            + + E +G G F EV  A  +  G   A+K+I  ++ + KE  + NEI++L++      
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEK-IINEIQILKK------ 53

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGSY 148
                               HPNIV+   ++  K ++++VME  +GG L D +     + 
Sbjct: 54  ------------------CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTL 95

Query: 149 TEKDASMLIRQVLEAVDYMHEAR 171
           TE   + + +++L+ ++Y+H   
Sbjct: 96  TESQIAYVCKELLKGLEYLHSNG 118

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 75.0 bits (185), Expect = 8e-17
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
            Y L +L+G GAF  V    + E G   A+K I  + +K +   S+  EI +L+      
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKN----- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HPNIV+ I + E    +Y+++E    G L   I + G +
Sbjct: 56  -------------------LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPF 96

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
            E   ++ + QVL+ + Y+HE
Sbjct: 97  PESLVAVYVYQVLQGLAYLHE 117

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 74.9 bits (185), Expect = 1e-16
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 28/145 (19%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE-NEIKVLRRFSQSVH 89
           Y + + LG G F  V LA ++E G + A+K + KK     E+ +   E+K LR+ ++   
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNE--- 56

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV--EKGS 147
                               HPNIV+L E F +  ++Y V E +  G L+  +   +   
Sbjct: 57  --------------------HPNIVKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKP 95

Query: 148 YTEKDASMLIRQVLEAVDYMHEARY 172
           ++E     +I Q+L+ + ++H+  +
Sbjct: 96  FSESVIRSIIYQILQGLAHIHKHGF 120

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 73.6 bits (181), Expect = 3e-16
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 28/138 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVK--IIDKKALKGKEDS--LENEIKVLRRFSQSVHN 90
           ELLG+G+F  V    + ++G  FAVK   +      G+E    LE EI +L         
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALL--------- 56

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                           +L HPNIVQ + T  ++  +Y+ +ELV GG L   + + GS+ E
Sbjct: 57  ---------------SKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPE 101

Query: 151 KDASMLIRQVLEAVDYMH 168
               +  RQ+L  ++Y+H
Sbjct: 102 PVIRLYTRQILLGLEYLH 119

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 72.3 bits (178), Expect = 7e-16
 Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 26/141 (18%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK--ALKGKEDSLENEIKVLRRFSQSV 88
           + L  ++G GAF +V + + R+   MFA+K ++K+    KG   ++ NE ++L       
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRIL------- 54

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                            + L HP +V L  +F+D+  +YLV++L+ GG+L   + +K  +
Sbjct: 55  -----------------QELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKF 97

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           +E+     I +++ A++Y+H 
Sbjct: 98  SEEQVKFWICEIVLALEYLHS 118

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (168), Expect = 4e-14
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 22/138 (15%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           ++G GAF EV L   ++ G ++A+K++ K  +            + R     V    D  
Sbjct: 8   VIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM------------IKRNQIAHVRAERDIL 55

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
            D +S          P IV+L  +F+D+  +YLVME + GG+L + ++ K  + E+ A  
Sbjct: 56  ADADS----------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARF 105

Query: 156 LIRQVLEAVDYMHEARYL 173
            I +++ A+D +H+  ++
Sbjct: 106 YIAELVLALDSVHKLGFI 123

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 67.2 bits (164), Expect = 1e-13
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 26/139 (18%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA-LKGKE-DSLENEIKVLRRFSQSVHN 90
           + E LGTG+F  VR+A+ +  G  +A+K + K+  LK K+   +  E  +L         
Sbjct: 22  MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSIL--------- 72

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                            L+HP IV ++ +F+D+++VY ++E V GGELF  + + G +  
Sbjct: 73  ---------------MELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN 117

Query: 151 KDASMLIRQVLEAVDYMHE 169
             A     +++ A +Y+H 
Sbjct: 118 DVAKFYHAELVLAFEYLHS 136

Length = 329

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 67.1 bits (162), Expect = 1e-13
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 31/149 (20%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQS 87
            Y +   LG G+F EV LA  R+     A+K++ KK     ++      EI++L   +  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNH- 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--- 144
                                  PNIV+L + F+D+  +YLVME V GG L D + +   
Sbjct: 57  ----------------------PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGR 94

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEARYL 173
           KG  +E +A  ++ Q+L A++Y+H    +
Sbjct: 95  KGPLSESEALFILAQILSALEYLHSKGII 123

Length = 384

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 30/138 (21%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED---SLENEIKVLRRFSQSVHNRLD 93
           LG G+   V     +  G ++A+K I    + G E+    L  E+K LR           
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKI---HVDGDEEFRKQLLRELKTLRSCE-------- 57

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                            P +V+    F  + ++ +V+E + GG L D + + G   E   
Sbjct: 58  ----------------SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVL 101

Query: 154 SMLIRQVLEAVDYMHEAR 171
           + + RQ+L+ +DY+H  R
Sbjct: 102 AYIARQILKGLDYLHTKR 119

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 33/147 (22%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----EIKVLRRFS 85
           +Y +   +G GA   V  A+ RE G   A+K   K AL+  E  + N    EIK L+   
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALK---KVALRRLEGGIPNQALREIKALQA-- 55

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-E 144
                                   HP +V+L++ F       LVME +    L + +  E
Sbjct: 56  ----------------------CQHPYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDE 92

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEAR 171
           +    E      +R +L+ V YMH   
Sbjct: 93  ERPLPEAQVKSYMRMLLKGVAYMHANG 119

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 3e-12
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 28/138 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKII----DKKALKGKEDSLENEIKVLRRFSQSVHN 90
           +LLG GAF  V L    + G   AVK +    D    K + ++LE EI++L+        
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN------- 60

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                            L H  IVQ      D   + + ME + GG + D++   G+ TE
Sbjct: 61  -----------------LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTE 103

Query: 151 KDASMLIRQVLEAVDYMH 168
                  RQ+LE V+Y+H
Sbjct: 104 TVTRKYTRQILEGVEYLH 121

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 26/132 (19%)

Query: 40  GAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETND 97
           GA+  V LA+ +  G ++A+K+I K  +  K   D +  E  +L +              
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------------ 51

Query: 98  NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLI 157
                        P +V+L  +F+ K  +YLVME + GG+L   +   GS  E  A + I
Sbjct: 52  ------------SPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYI 99

Query: 158 RQVLEAVDYMHE 169
            +++ A++Y+H 
Sbjct: 100 AEIVLALEYLHS 111

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 62.4 bits (152), Expect = 5e-12
 Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 32/144 (22%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR--- 91
           +++G GAF EVRL + ++ G ++A+K + K       + LE E        Q  H R   
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKS------EMLEKE--------QVAHVRAER 52

Query: 92  --LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
             L E +             +P +V+L  +F+D++ +YL+ME + GG++   +++K ++T
Sbjct: 53  DILAEAD-------------NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFT 99

Query: 150 EKDASMLIRQVLEAVDYMHEARYL 173
           E++    I + + A+D +H+  Y+
Sbjct: 100 EEETRFYIAETILAIDSIHKLGYI 123

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 21/149 (14%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEI--KVLRRFSQSV 88
           Y + E LG+GAF  V     + NG         +  L  KE ++ N    K  R   +S+
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNG---------QNLLALKEINVHNPAFGKDKRERDKSI 52

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG---GELFDRIVEK 145
            + + E          KE+L HPNIV+  +TF +  ++Y+VM+L+ G   GE F+ + EK
Sbjct: 53  GDIVSEVT------IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEK 106

Query: 146 G-SYTEKDASMLIRQVLEAVDYMHEARYL 173
              +TE+    +  Q++ A+ Y+H+ + +
Sbjct: 107 KQRFTEERIWNIFVQMVLALRYLHKEKRI 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.4 bits (150), Expect = 9e-12
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 36/147 (24%)

Query: 35  ELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           + LG GAF EV   + +      T  AVK + + A + +      E +V+++        
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG------ 54

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY--- 148
                             HPN+V+L+    ++  +YLV+E + GG+L D + +       
Sbjct: 55  ------------------HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPS 96

Query: 149 ------TEKDASMLIRQVLEAVDYMHE 169
                 + KD      Q+ + ++Y+  
Sbjct: 97  PEKSTLSLKDLLSFAIQIAKGMEYLAS 123

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 31/146 (21%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFS 85
           E + L E +G G+F EV  A  +    + A+K+ID   L+  ED +E+   EI+ L   S
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID---LEEAEDEIEDIQQEIQFL---S 54

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
           Q                        P I +   +F    K++++ME   GG   D +++ 
Sbjct: 55  Q---------------------CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKP 92

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEAR 171
           G   E   + ++R+VL  ++Y+HE  
Sbjct: 93  GKLDETYIAFILREVLLGLEYLHEEG 118

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 60.2 bits (147), Expect = 2e-11
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 29/147 (19%)

Query: 32  ILKELLGTGAFSEVRLA----ESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
            L + LG GAF EV       +     T  AVK + + A + + +    E  ++++ S  
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS-- 59

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG- 146
                                 HPNIV+L+        +Y+V E + GG+L D + + G 
Sbjct: 60  ----------------------HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE 97

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
             T KD   +  Q+ + ++Y+    ++
Sbjct: 98  KLTLKDLLQMALQIAKGMEYLESKNFV 124

Length = 258

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 22/134 (16%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-EIKVLRRFSQSVHNRLDET 95
           LG G F +V LAE ++ G ++A+     KALK K D +   E++ L         R+ ET
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAI-----KALK-KGDIIARDEVESLM-----CEKRIFET 55

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                   + ER  HP +V L   F+ +  V  VME   GG+L   I     ++E  A  
Sbjct: 56  -------ANSER--HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVF 105

Query: 156 LIRQVLEAVDYMHE 169
               V+  + Y+HE
Sbjct: 106 YAACVVLGLQYLHE 119

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 27/142 (19%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
            E Y   E +G GA  EV  A  R  G   A+K +  +  K  ++ + NEI +++     
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR--KQNKELIINEILIMKD---- 71

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 HPNIV   +++    ++++VME + GG L D I +   
Sbjct: 72  --------------------CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFV 111

Query: 148 Y-TEKDASMLIRQVLEAVDYMH 168
              E   + + R+VL+ ++Y+H
Sbjct: 112 RMNEPQIAYVCREVLQGLEYLH 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 35/147 (23%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L E++G G + +V  A  ++ G + A+KI+D    + +E+ ++ E  +LR++S       
Sbjct: 10  LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII--EDEEEEIKEEYNILRKYSN------ 61

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDK------HKVYLVMELVTGG---ELFDRIV 143
                            HPNI      F  K       +++LVMEL  GG   +L   + 
Sbjct: 62  -----------------HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLR 104

Query: 144 EKG-SYTEKDASMLIRQVLEAVDYMHE 169
           +KG    E+  + ++R+ L  + Y+HE
Sbjct: 105 KKGKRLKEEWIAYILRETLRGLAYLHE 131

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 59.3 bits (143), Expect = 6e-11
 Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 28/144 (19%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +++G GAF EVRL + ++ G ++A+KI+ K       D LE E        Q  H R   
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMKILRKA------DMLEKE--------QVAHIR--- 49

Query: 95  TNDNNSNDKDKERLTHPN---IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
                    +++ L   +   +V++  +F+DK  +YL+ME + GG++   +++K + +E+
Sbjct: 50  --------AERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEE 101

Query: 152 DASMLIRQVLEAVDYMHEARYLSK 175
                I + + A+D +H+  ++ +
Sbjct: 102 ATQFYIAETVLAIDAIHQLGFIHR 125

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 58.8 bits (143), Expect = 7e-11
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 30/145 (20%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFS 85
           +E Y L + +G+G + +V  A     G + A+K+I    L+  +D   ++ EI +L+   
Sbjct: 2   QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKE-- 56

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VE 144
                                   HPNIV    ++  + K+++VME   GG L D   V 
Sbjct: 57  ----------------------CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVT 94

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
           +G  +E   + + R+ L+ + Y+HE
Sbjct: 95  RGPLSELQIAYVCRETLKGLAYLHE 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 58.8 bits (142), Expect = 9e-11
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 25/136 (18%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKA-LKGKEDS-LENEIKVLRRFSQSVHNRL 92
           +++G G+F +V LA+ + +G+ +AVK++ KK  LK KE + +  E  VL +         
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLK--------- 51

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                          L HP +V L  +F+   K+Y V++ V GGELF  +  +  + E  
Sbjct: 52  --------------NLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPR 97

Query: 153 ASMLIRQVLEAVDYMH 168
           A     +V  A+ Y+H
Sbjct: 98  ARFYAAEVASAIGYLH 113

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 58.6 bits (142), Expect = 9e-11
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 32/137 (23%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVHNRLD 93
           LG GAF +V  A+ +E G   A KII  ++    E+ LE+   EI +L            
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECK-------- 60

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKD 152
                           HPNIV L E +  ++K+++++E   GG L   ++E     TE  
Sbjct: 61  ----------------HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQ 104

Query: 153 ASMLIRQVLEAVDYMHE 169
              + RQ+LEA++++H 
Sbjct: 105 IRYVCRQMLEALNFLHS 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 26/137 (18%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLR-RFSQSVHNRLD 93
           +LLG G    V L   +  G +FA+K++DKK +           KV R    Q +   LD
Sbjct: 7   KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-------IKRNKVKRVLTEQEILATLD 59

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD-RIVEKGSY-TEK 151
                           HP +  L  +F+ +  + LVM+   GGELF     + G   +E+
Sbjct: 60  ----------------HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEE 103

Query: 152 DASMLIRQVLEAVDYMH 168
            A     +VL A++Y+H
Sbjct: 104 VARFYAAEVLLALEYLH 120

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 28/136 (20%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKII---DKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
            +GTG F  V L   R +   +A+K++   +   LK +E  + NE +VL+          
Sbjct: 8   TVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLK-QEQHVHNEKRVLKE--------- 57

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                          ++HP I++L  T  D+  +Y++ME V GGELF  +   G ++   
Sbjct: 58  ---------------VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNST 102

Query: 153 ASMLIRQVLEAVDYMH 168
                 +++ A++Y+H
Sbjct: 103 GLFYASEIVCALEYLH 118

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 27/143 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           + Y L E++G GA + V  A    N    A+K ID +  +   D L  E++ +   SQ  
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM---SQC- 56

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD---RIVEK 145
                                HPN+V+   +F    +++LVM  ++GG L D       +
Sbjct: 57  --------------------NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPR 96

Query: 146 GSYTEKDASMLIRQVLEAVDYMH 168
           G   E   + ++++VL+ ++Y+H
Sbjct: 97  GGLDEAIIATVLKEVLKGLEYLH 119

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 28/144 (19%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +++G GAF EVRL + ++ G ++A+KI+ K       D LE E        Q  H R   
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHVYAMKILRKA------DMLEKE--------QVGHIR--- 49

Query: 95  TNDNNSNDKDKERLTHPN---IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
                    +++ L   +   +V++  +F+DK  +YL+ME + GG++   +++K + TE+
Sbjct: 50  --------AERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEE 101

Query: 152 DASMLIRQVLEAVDYMHEARYLSK 175
           +    I + + A+D +H+  ++ +
Sbjct: 102 ETQFYIAETVLAIDSIHQLGFIHR 125

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 30/147 (20%)

Query: 32  ILKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
            L + LG GAF EV                AVK + + A + + +    E +++R+    
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD-- 59

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 HPNIV+L+    ++  + +VME + GG+L D + +   
Sbjct: 60  ----------------------HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP 97

Query: 148 YTEKDASML--IRQVLEAVDYMHEARY 172
                + +L    Q+   ++Y+    +
Sbjct: 98  KELSLSDLLSFALQIARGMEYLESKNF 124

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 29/147 (19%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSV 88
           YI   +LG GAF E  L    E+ ++   K ++   L  K + D+L NEI +L       
Sbjct: 2   YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDAL-NEIVIL------- 53

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS- 147
                              L HPNI+     F D + + + ME   GG L+D+IV +   
Sbjct: 54  -----------------SLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQ 96

Query: 148 -YTEKDASMLIRQVLEAVDYMHEARYL 173
            + E+     + Q++ AV Y+H+A  L
Sbjct: 97  LFEEEMVLWYLFQIVSAVSYIHKAGIL 123

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 57.1 bits (138), Expect = 4e-10
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 23/134 (17%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK-VLRRFSQSVHNRLDET 95
           +G G+F +V LA+ + +G  +AVK++ KKA+  K      E K ++   +  + N     
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK-----KEQKHIMAERNVLLKN----- 52

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                       + HP +V L  +F+   K+Y V++ V GGELF  +  + S+ E  A  
Sbjct: 53  ------------VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARF 100

Query: 156 LIRQVLEAVDYMHE 169
              ++  A+ Y+H 
Sbjct: 101 YAAEIASALGYLHS 114

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.9 bits (137), Expect = 4e-10
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 21/134 (15%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +++G G+F +V LA+ + +G  +AVK++ KK              VL R  Q   + + E
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKI-------------VLNRKEQK--HIMAE 45

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
            N    N K      HP +V L  +F+   K+Y V++ V GGELF  +  + S+ E  A 
Sbjct: 46  RNVLLKNVK------HPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRAR 99

Query: 155 MLIRQVLEAVDYMH 168
               ++  A+ Y+H
Sbjct: 100 FYAAEIASALGYLH 113

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 56.6 bits (136), Expect = 5e-10
 Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 32/143 (22%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVHNRLD 93
           LG GAF +V  A+++E G + A K+ID K+    E+ LE+   EI +L            
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDIL------------ 56

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKD 152
                           HPNIV+L++ F  ++ +++++E   GG +   ++E +   TE  
Sbjct: 57  ------------ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQ 104

Query: 153 ASMLIRQVLEAVDYMHEARYLSK 175
             ++ +Q LEA++Y+HE + + +
Sbjct: 105 IRVVCKQTLEALNYLHENKIIHR 127

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 56.0 bits (135), Expect = 6e-10
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 27/149 (18%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
           KY+  + +G G+F +  L +S+E+G  + +K I+   +  KE +    E+ VL       
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVL------- 53

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGS 147
                              + HPNIVQ  E+FE+   +Y+VM+   GG+L+ +I  ++G 
Sbjct: 54  -----------------SNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGV 96

Query: 148 YTEKDASM-LIRQVLEAVDYMHEARYLSK 175
              +D  +    Q+  A+ ++H+ + L +
Sbjct: 97  LFPEDQILDWFVQICLALKHVHDRKILHR 125

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 56.0 bits (136), Expect = 6e-10
 Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 29/145 (20%)

Query: 33  LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           L + LG GAF EV   +      +     AVK + + A + + +    E +++R+     
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD--- 59

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HPN+V+L+    ++  +Y+VME + GG+L   + +    
Sbjct: 60  ---------------------HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPK 98

Query: 149 -TEKDASMLIRQVLEAVDYMHEARY 172
            +  D      Q+   ++Y+    +
Sbjct: 99  LSLSDLLSFALQIARGMEYLESKNF 123

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 55.8 bits (135), Expect = 8e-10
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 37/142 (26%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKII-----DKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           +G G F +V  A + + G + AVK I     D K +K     + +E+KVL          
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIK----EIADEMKVL---------- 53

Query: 92  LDETNDNNSNDKDKERLTHPNIVQL--IETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                         E L HPN+V+   +E   +  KVY+ ME  +GG L + +       
Sbjct: 54  --------------ELLKHPNLVKYYGVEVHRE--KVYIFMEYCSGGTLEELLEHGRILD 97

Query: 150 EKDASMLIRQVLEAVDYMHEAR 171
           E    +   Q+LE + Y+H   
Sbjct: 98  EHVIRVYTLQLLEGLAYLHSHG 119

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 29/143 (20%)

Query: 33  LKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQ 86
           L  +LGTGA+ +V L         G ++A+K++ K  +  K  + E+   E +VL    +
Sbjct: 4   LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                   P +V L   F+   K++L+++ V GGELF  + ++ 
Sbjct: 64  C-----------------------PFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE 100

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            +TE +  + I +++ A+D++H+
Sbjct: 101 HFTESEVRVYIAEIVLALDHLHQ 123

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G + +V LA+ ++ G + A+K + K  L                       +L+E  
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF----------------------KLNEVR 46

Query: 97  DNNSNDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
            +   ++D    T    +V+L+  F+D   +YL ME V GG+    +   G  +E  A  
Sbjct: 47  -HVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARF 105

Query: 156 LIRQVLEAVDYMHEARY 172
            + ++ EAVD +HE  Y
Sbjct: 106 YMAEMFEAVDALHELGY 122

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 27/148 (18%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSV 88
           + +K L+G G F EV++   +  G ++A+K++ K  L  +E     E E  +L       
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI----- 57

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGS 147
                    +NS          P I QL   F+DK  +YLVME   GG+L   +   +  
Sbjct: 58  ---------SNS----------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ 98

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
           + E  A   + +++ A+  +H+  Y+ +
Sbjct: 99  FDEDMAQFYLAELVLAIHSVHQMGYVHR 126

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 22/135 (16%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K++               V + L E
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDE---------------VAHTLTE 45

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
           +       +  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 46  S-------RVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 98

Query: 155 MLIRQVLEAVDYMHE 169
               +++ A+ Y+H 
Sbjct: 99  FYGAEIVSALGYLHS 113

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 37/140 (26%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE-----NEIKVLRRFSQSVHNR 91
           +G G FSEV  A+SR+ G  +A+     K +K    SLE      EI+ LRR S      
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAI-----KCMKKHFKSLEQVNNLREIQALRRLSP----- 56

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIET-FEDKH-KVYLVMELVTGGELFDRIVEKGSY- 148
                             HPNI++LIE  F+ K  ++ LV EL+    L++ I  +    
Sbjct: 57  ------------------HPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPL 97

Query: 149 TEKDASMLIRQVLEAVDYMH 168
            EK     + Q+L+++D+MH
Sbjct: 98  PEKRVKSYMYQLLKSLDHMH 117

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 31/146 (21%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
            Y + E +G G+F  VR    + +G +   K ID   +  KE   L +E+ +LR      
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILR------ 54

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGEL---FDRIV 143
                              L HPNIV+  +   D+    +Y+VME   GG+L     +  
Sbjct: 55  ------------------ELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCK 96

Query: 144 EKGSYTEKDASMLI-RQVLEAVDYMH 168
           ++  Y E++    I  Q+L A+   H
Sbjct: 97  KERKYIEEEFIWRILTQLLLALYECH 122

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 27/137 (19%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE---NEIKVLRRFSQSVHNRL 92
           +LG G+F +V LAE +    ++AVK++ KK +  ++D +E    E +VL     ++  + 
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVL-KKDVILQDDDVECTMTEKRVL-----ALAGK- 54

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                            HP + QL   F+ K +++ VME V GG+L   I   G + E  
Sbjct: 55  -----------------HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPR 97

Query: 153 ASMLIRQVLEAVDYMHE 169
           A     +++  + ++HE
Sbjct: 98  ARFYAAEIVLGLQFLHE 114

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 54.1 bits (130), Expect = 4e-09
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
            +LG G+F +V LA  +E+G ++AVK++ KK +  ++D +E  +   R  S +  N    
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVL-KKDVILQDDDVECTMTEKRILSLA-RN---- 54

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                          HP + QL   F+   +++ VME V GG+L   I +   + E  A 
Sbjct: 55  ---------------HPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARAR 99

Query: 155 MLIRQVLEAVDYMHE 169
               ++  A+ ++H+
Sbjct: 100 FYAAEITSALMFLHD 114

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 54.0 bits (130), Expect = 5e-09
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 32/137 (23%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR----- 91
           +G GAF EV L    +   ++A+K + K               VL R +Q+ H +     
Sbjct: 9   IGIGAFGEVCLVRKVDTNALYAMKTLRKA-------------DVLMR-NQAAHVKAERDI 54

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
           L E  DN              +V+L  +F+DK  +Y VM+ + GG++   ++  G + E 
Sbjct: 55  LAEA-DN------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEED 101

Query: 152 DASMLIRQVLEAVDYMH 168
            A   I ++  A++ +H
Sbjct: 102 LARFYIAELTCAIESVH 118

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 53.3 bits (128), Expect = 7e-09
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 31/143 (21%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKED----SLENEIKVLRRFSQSVH 89
           + LGTGAFS    A   + GT+ AVK +   +    +++    +L  EI+++        
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLM-------- 57

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLI-ETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                            RL HP+I++++  T ED H   L +E + GG +   + + G++
Sbjct: 58  ----------------ARLNHPHIIRMLGATCEDSH-FNLFVEWMAGGSVSHLLSKYGAF 100

Query: 149 TEKDASMLIRQVLEAVDYMHEAR 171
            E        Q+L  + Y+HE +
Sbjct: 101 KEAVIINYTEQLLRGLSYLHENQ 123

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 53.1 bits (127), Expect = 9e-09
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 25/136 (18%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRL 92
           +++G G+F +V LA  +     +AVK++ KKA+  K +E  + +E  VL +         
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLK--------- 51

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                          + HP +V L  +F+   K+Y V++ + GGELF  +  +  + E  
Sbjct: 52  --------------NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR 97

Query: 153 ASMLIRQVLEAVDYMH 168
           A     ++  A+ Y+H
Sbjct: 98  ARFYAAEIASALGYLH 113

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 26/137 (18%)

Query: 35  ELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           ++LG G+F +V   R     + G ++A+K++ K  LK ++          R  ++   + 
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRD----------RVRTKMERDI 51

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
           L E N             HP IV+L   F+ + K+YL+++ + GG+LF R+ ++  +TE+
Sbjct: 52  LAEVN-------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 98

Query: 152 DASMLIRQVLEAVDYMH 168
           D    + ++  A+D++H
Sbjct: 99  DVKFYLAELALALDHLH 115

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 30/143 (20%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE + + E LG G++  V  A  +E G + A+K++    ++     +  EI +L+     
Sbjct: 2   EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP---VEEDLQEIIKEISILK----- 53

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEK 145
                            +     P IV+   ++     +++VME    G + D  +I  K
Sbjct: 54  -----------------QCD--SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK 94

Query: 146 GSYTEKDASMLIRQVLEAVDYMH 168
            + TE++ + ++ Q L+ ++Y+H
Sbjct: 95  -TLTEEEIAAILYQTLKGLEYLH 116

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)

Query: 40  GAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN 99
           GAF  V LA+ R  G  FA+K++ K  +  K     N++  ++     +  + +      
Sbjct: 7   GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAK-----NQVTNVKAERAIMMIQGES----- 56

Query: 100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQ 159
                      P + +L  +F+ K  +YLVME + GG+    I   G   E  A   I +
Sbjct: 57  -----------PYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAE 105

Query: 160 VLEAVDYMHE 169
           V+  V+ +H+
Sbjct: 106 VVLGVEDLHQ 115

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 34  KELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
            ++LG G + +V   R     + G +FA+K++ KKA             ++R    + H 
Sbjct: 1   LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVL-KKA------------TIVRNQKDTAHT 47

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
           +  E N         E + HP IV LI  F+   K+YL++E ++GGELF  +  +G + E
Sbjct: 48  KA-ERNI-------LEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME 99

Query: 151 KDASMLIRQVLEAVDYMHE 169
             A   + ++  A++++H+
Sbjct: 100 DTACFYLSEISLALEHLHQ 118

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 52.0 bits (124), Expect = 2e-08
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 22/137 (16%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   + +G  +A+KI+ K+ +  K                      DE
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAK----------------------DE 38

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L  +F+ K ++  VME V GGELF  +  +  ++E    
Sbjct: 39  VAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTR 98

Query: 155 MLIRQVLEAVDYMHEAR 171
               +++ A+DY+H  +
Sbjct: 99  FYGAEIVSALDYLHSGK 115

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 32/147 (21%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVK--IIDKKALKGKE------DSLENEIKVL 81
           K+I   L+G+G+F  V L  +  +G + AVK   +   +   K+      D+L  EI +L
Sbjct: 1   KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALL 60

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           +                         L H NIVQ + +  D   + + +E V GG +   
Sbjct: 61  KE------------------------LQHENIVQYLGSSLDADHLNIFLEYVPGGSVAAL 96

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           +   G++ E      +RQ+L+ ++Y+H
Sbjct: 97  LNNYGAFEETLVRNFVRQILKGLNYLH 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 37/150 (24%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKII---------DKKALKGKEDSLENEIKV 80
           K++  EL+G G +  V LA +   G M AVK +              K    +L +EI+ 
Sbjct: 2   KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIET 61

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI--ETFEDKHKVYLVMELVTGGEL 138
           L                     KD   L H NIVQ +  ET E+   ++L  E V GG +
Sbjct: 62  L---------------------KD---LDHLNIVQYLGFETTEEYLSIFL--EYVPGGSI 95

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
              +   G + E+       QVLE + Y+H
Sbjct: 96  GSCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 51.8 bits (124), Expect = 3e-08
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 33/149 (22%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
           PSIEE  I+K +   GAF +V L   + N  ++AVK++ KKA                  
Sbjct: 1   PSIEEFVIVKPI-SRGAFGKVYLGRKKNNSKLYAVKVV-KKA------------------ 40

Query: 85  SQSVHNRLDETNDNNSNDKDKER-----LTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
                   D  N N  +    ER        P IV L  + +  + VYLVME + GG++ 
Sbjct: 41  --------DMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVK 92

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
             +   G + E+ A   I +V  A+DY+H
Sbjct: 93  SLLHIYGYFDEEMAVKYISEVALALDYLH 121

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 51.5 bits (123), Expect = 3e-08
 Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 29/143 (20%)

Query: 33  LKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQ 86
           L ++LGTGA+ +V   R     + G ++A+K++ K AL  K  ++E+   E  VL    Q
Sbjct: 4   LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
           S                       P +V L   F+ + K++L+++ V+GGE+F  + ++ 
Sbjct: 64  S-----------------------PFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD 100

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
           +++E +      +++ A++++H+
Sbjct: 101 NFSEDEVRFYSGEIILALEHLHK 123

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 51.2 bits (123), Expect = 4e-08
 Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 31/141 (21%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR--LDE 94
           +G G +  V  A  +  G + A+K                  K+  RF      +  L E
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIK------------------KIKLRFESEGIPKTALRE 48

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELV--TGGELFDRIVEKGSYTEKD 152
                   K  + L HPNI++L++ F  K  +YLV E +     +L      +    E  
Sbjct: 49  I-------KLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESL 99

Query: 153 ASMLIRQVLEAVDYMHEARYL 173
               + Q+L+ + + H    L
Sbjct: 100 IKSYLYQLLQGLAFCHSHGIL 120

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 33/143 (23%), Positives = 71/143 (49%), Gaps = 29/143 (20%)

Query: 33  LKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQ 86
           L ++LGTGA+ +V   R     ++G ++A+K++ K  +  K  + E+   E +VL    Q
Sbjct: 4   LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
           S                       P +V L   F+   K++L+++ + GGELF  + ++ 
Sbjct: 64  S-----------------------PFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE 100

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E++  +   +++ A++++H+
Sbjct: 101 RFKEQEVQIYSGEIVLALEHLHK 123

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 50.8 bits (122), Expect = 5e-08
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 43/150 (28%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVK---------IIDKKALKGKEDSLENEIK 79
            KY +  ++G GA+  V    ++  G + A+K          + K AL+        E+K
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALR--------EVK 52

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           VLR+                        L H NIV L E F  K ++YLV E V    L 
Sbjct: 53  VLRQ------------------------LRHENIVNLKEAFRRKGRLYLVFEYV-ERTLL 87

Query: 140 DRIVEKGSYTEKDA-SMLIRQVLEAVDYMH 168
           + +         DA    I Q+L+A+ Y H
Sbjct: 88  ELLEASPGGLPPDAVRSYIWQLLQAIAYCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 50.7 bits (121), Expect = 5e-08
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 36/153 (23%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +Y +  ++G G+F    L +   +   +A+K                EI++ +  S    
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMK----------------EIRLPKSSS---- 40

Query: 90  NRLDETNDNNSNDKDKE-----RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-V 143
                       D  KE     ++ HPNIV   E+FE    +Y+VME   GG+L  +I +
Sbjct: 41  ---------AVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL 91

Query: 144 EKGS-YTEKDASMLIRQVLEAVDYMHEARYLSK 175
           ++G  + E        Q+   V ++HE R L +
Sbjct: 92  QRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHR 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 50.8 bits (121), Expect = 6e-08
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 32/143 (22%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVHNRLD 93
           LG GAF +V  A+++E G + A K+I+ K+    E+ LE+   EI++L            
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEIL------------ 63

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKD 152
                           HP IV+L+  F    K+++++E   GG +   ++E     TE  
Sbjct: 64  ------------ATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 111

Query: 153 ASMLIRQVLEAVDYMHEARYLSK 175
             ++ RQ+LEA+ Y+H  + + +
Sbjct: 112 IQVICRQMLEALQYLHSMKIIHR 134

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 50.4 bits (120), Expect = 7e-08
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 22/137 (16%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DE 38

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 39  VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 98

Query: 155 MLIRQVLEAVDYMHEAR 171
               +++ A+DY+H  +
Sbjct: 99  FYGAEIVSALDYLHSEK 115

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 50.4 bits (120), Expect = 7e-08
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 22/139 (15%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF EV LA   +   ++A+K + KK              VL R +Q  H + +   
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLRKK-------------DVLLR-NQVAHVKAER-- 52

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
            +   + D E      +V+L  +F+DK  +Y VM+ + GG++   ++  G + E  A   
Sbjct: 53  -DILAEADNEW-----VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFY 106

Query: 157 IRQVLEAVDYMHEARYLSK 175
           I ++  AV+ +H+  ++ +
Sbjct: 107 IAELTCAVESVHKMGFIHR 125

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 50.3 bits (121), Expect = 9e-08
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 32/146 (21%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE----NEIKVLRRFS 85
           +Y   + LG G ++ V  A  +E G + A+K I     K  +D +      EIK+L+   
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                   HPNI+ L++ F  K  + LV E +   +L +++++ 
Sbjct: 61  ------------------------HPNIIGLLDVFGHKSNINLVFEFM-ETDL-EKVIKD 94

Query: 146 GS--YTEKDASMLIRQVLEAVDYMHE 169
            S   T  D    +   L  ++Y+H 
Sbjct: 95  KSIVLTPADIKSYMLMTLRGLEYLHS 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 49.9 bits (119), Expect = 1e-07
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 23/135 (17%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--EIKVLRRFSQSVHNRLDE 94
           +G G F +V     ++   ++A+K++ KK +  K++      E  +L R        LDE
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL------LDE 54

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
           +               P IV L  +F+    +YLV + ++GGELF  + ++G ++E  A 
Sbjct: 55  S---------------PFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAK 99

Query: 155 MLIRQVLEAVDYMHE 169
             I +++ A++++H+
Sbjct: 100 FYIAELVLALEHLHK 114

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 28/126 (22%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIID--KKALKGKEDSLENEIKVLRRFSQS 87
           +Y + + +G G+F ++ LA+++ +     +K ID  K  +K KE S + E+ +L      
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEAS-KKEVILL------ 53

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKG 146
                              ++ HPNIV    +F++  ++++VME   GG+L  RI  ++G
Sbjct: 54  ------------------AKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG 95

Query: 147 SYTEKD 152
               +D
Sbjct: 96  VLFSED 101

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 32/148 (21%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFA---VKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           + +++ +G G FS V  A    +G + A   V+I +    K ++D L+ EI +L++    
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK-EIDLLKQ---- 58

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI----V 143
                               L HPN+++ + +F + +++ +V+EL   G+L   I     
Sbjct: 59  --------------------LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKK 98

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           +K    E+       Q+  A+++MH  R
Sbjct: 99  QKRLIPERTIWKYFVQLCSALEHMHSKR 126

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 30/146 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKII----DKKALKGKEDSLENEIKVLRRF 84
             + L +LLG GAF EV L    + G   AVK +    D +    + ++LE EI++L+  
Sbjct: 2   VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKN- 60

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRI 142
                                  L H  IVQ      D  + K+ + +E + GG + D++
Sbjct: 61  -----------------------LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQL 97

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMH 168
              G+ TE       RQ+L+ V Y+H
Sbjct: 98  KAYGALTENVTRRYTRQILQGVSYLH 123

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 33/141 (23%), Positives = 72/141 (51%), Gaps = 22/141 (15%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +++G GAF EVRL + ++ G ++A+K + K  +  K+D L +           V    D 
Sbjct: 7   KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF-KKDQLAH-----------VKAERDV 54

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
             +++S          P +V L  +F+D   +YL+ME + GG+L   +++  +++E    
Sbjct: 55  LAESDS----------PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTR 104

Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             + + + A++ +H+  ++ +
Sbjct: 105 FYMAECVLAIEAVHKLGFIHR 125

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 38

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 39  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 98

Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 99  FYGAEIVSALEYLH 112

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 30/142 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKII----DKKALKGKEDSLENEIKVLRRFSQSV 88
           L +LLG GAF  V L    + G   AVK +    +      + ++LE EI++L+      
Sbjct: 6   LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKN----- 60

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKG 146
                              L H  IVQ      D  +  + + ME + GG + D++   G
Sbjct: 61  -------------------LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG 101

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
           + TE       RQ+LE V Y+H
Sbjct: 102 ALTENVTRKYTRQILEGVSYLH 123

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 22/133 (16%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+F +V     R+   ++A+K I K  +  +              S+  H   + T 
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSR--------------SEVTHTLAERTV 46

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                     ++  P IV L  +F+   K+YLV+  + GGELF  +  +G +    A   
Sbjct: 47  --------LAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFY 98

Query: 157 IRQVLEAVDYMHE 169
             ++L A++ +H+
Sbjct: 99  TAELLCALENLHK 111

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 22/139 (15%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF EV LA   +   ++A+K + KK              VL R +Q  H + +   
Sbjct: 9   LGIGAFGEVCLACKVDTHALYAMKTLRKK-------------DVLNR-NQVAHVKAER-- 52

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
            +   + D E      +V+L  +F+DK  +Y VM+ + GG++   ++    + E  A   
Sbjct: 53  -DILAEADNEW-----VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFY 106

Query: 157 IRQVLEAVDYMHEARYLSK 175
           I ++  A++ +H+  ++ +
Sbjct: 107 IAELTLAIESVHKMGFIHR 125

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 48.2 bits (115), Expect = 4e-07
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 26/132 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  +  G   AVK +D +  + +E  L NE+ ++R +            
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 74

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        HPNIV++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 75  -------------HPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATV 120

Query: 157 IRQVLEAVDYMH 168
              VL+A+ ++H
Sbjct: 121 CLAVLKALSFLH 132

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 48.2 bits (116), Expect = 4e-07
 Identities = 36/167 (21%), Positives = 54/167 (32%), Gaps = 71/167 (42%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--------EIKVLR 82
           Y   E LG G +  V  A  ++ G + A+K I       + D+ E         EI +L+
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI-------RLDNEEEGIPSTALREISLLK 53

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
                                    L HPNIV+L++    + K+YLV E           
Sbjct: 54  E------------------------LKHPNIVKLLDVIHTERKLYLVFE----------- 78

Query: 143 VEKGSYTEKDASMLI----------------RQVLEAVDYMHEARYL 173
                Y + D    +                 Q+L  + Y H  R L
Sbjct: 79  -----YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V LAE +    ++A+KI+ KK +  ++D +E  +   R  +          
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKIL-KKDVVIQDDDVECTMVEKRVLAL--------- 56

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                  +DK     P + QL   F+   ++Y VME V GG+L   I + G + E  A  
Sbjct: 57  -------QDKP----PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 105

Query: 156 LIRQVLEAVDYMHE 169
              ++   + ++H 
Sbjct: 106 YAAEISVGLFFLHR 119

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 47.6 bits (113), Expect = 7e-07
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 24/150 (16%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +YIL++ LG G+F  V L             + DKKA+  +       +KVL+       
Sbjct: 1   RYILQQRLGKGSFGTVYL-------------VKDKKAVAEER------LKVLKEIPVGEL 41

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----K 145
           N  +ET   N   +   +L HP IV+   +F ++    ++ E   G +L  ++ E     
Sbjct: 42  NP-NETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTG 100

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
            + +E        Q+L  V YMH+ R L +
Sbjct: 101 KTLSENQVCEWFIQLLLGVHYMHQRRILHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 24/104 (23%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           E +G G F EV     R + T  AVK   +      +     E ++L+++S         
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS--------- 51

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                          HPNIV+LI     K  +Y+VMELV GG+ 
Sbjct: 52  ---------------HPNIVRLIGVCTQKQPIYIVMELVQGGDF 80

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 39/162 (24%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK-IIDKKALKGKEDSLENEIKVLR 82
           G S    Y +   LG G F EV  A   + G + A+K I+      G   +   EIK+L+
Sbjct: 3   GCSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILK 62

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK--------VYLV---ME 131
                                   +L HPN+V LI+   ++          VY+V   M+
Sbjct: 63  ------------------------KLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD 98

Query: 132 LVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
               G L +  V+    TE      + Q+LE ++Y+HE   L
Sbjct: 99  HDLSGLLENPSVK---LTESQIKCYMLQLLEGINYLHENHIL 137

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 36/152 (23%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED----SLENEIKVLRRFSQ 86
           Y     +G GA+  V  A     G   A+K   K  +   E+    S   EI +L++   
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALK---KVRVPLSEEGIPLSTLREIALLKQL-- 55

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH-----KVYLVMELVTG--GELF 139
                              E   HPNIV+L++           K+ LV E V        
Sbjct: 56  -------------------ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYL 96

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
            +  + G   E     L+RQ+L  VD++H  R
Sbjct: 97  SKCPKPGLPPET-IKDLMRQLLRGVDFLHSHR 127

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 19/133 (14%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           ++G G F EV      + G M+A+K +DKK +K K+     E   L   ++ +   L  T
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ----GETLAL---NERIMLSLVST 53

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
            D             P IV +   F    K+  +++L+ GG+L   + + G ++EK+   
Sbjct: 54  GDC------------PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRF 101

Query: 156 LIRQVLEAVDYMH 168
              +++  +++MH
Sbjct: 102 YATEIILGLEHMH 114

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 28/139 (20%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F EV   + +  G M+A K +DKK LK +  E    NE K+L             
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL------------- 47

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKD 152
                      E+++   IV L   FE K  + LVM L+ GG+L   I   G   + E  
Sbjct: 48  -----------EKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEAR 96

Query: 153 ASMLIRQVLEAVDYMHEAR 171
           A     Q++  ++++H+ R
Sbjct: 97  AIFYAAQIICGLEHLHQRR 115

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 30/140 (21%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKII-----DKKALKGKEDSLENEIKVLRRFSQSVH 89
           E+LG GA+  V    + + G + AVK +     +  A + + + L+ E+ +L+       
Sbjct: 6   EVLGKGAYGTVYCGLTNQ-GQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKS------ 58

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L H NIVQ + T  D + + + ME V GG +   +   G   
Sbjct: 59  ------------------LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLP 100

Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E       +Q+L+ V Y+H 
Sbjct: 101 EPVFCKYTKQILDGVAYLHN 120

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 43/148 (29%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-----SLENEIKVLRRFSQSVHNR 91
           +G G + +V  A +++ G + A+K I    ++ +++     ++  EIK+L++        
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIR---MENEKEGFPITAIR-EIKLLQK-------- 54

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK--VYLVMELV----TGGELFDRIVEK 145
                           L HPNIV+L E    K K  +Y+V E +    TG  L D    +
Sbjct: 55  ----------------LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTG--LLDS--PE 94

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYL 173
             +TE      ++Q+LE + Y+H    L
Sbjct: 95  VKFTESQIKCYMKQLLEGLQYLHSNGIL 122

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 27/136 (19%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVHNRL 92
           +LG G+F +V LAE +     FA+K + KK +  ++D +E    E +VL    +      
Sbjct: 2   VLGKGSFGKVMLAELKGTNEFFAIKAL-KKDVVLEDDDVECTMVERRVLALAWE------ 54

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                            HP +  L  TF+ K  ++ VME + GG+L   I   G + E  
Sbjct: 55  -----------------HPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEAR 97

Query: 153 ASMLIRQVLEAVDYMH 168
           A     +++  + ++H
Sbjct: 98  ARFYAAEIICGLQFLH 113

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           ++LG G+F +V LAE +  G  FAVK + KK +   +D +E  +   R  + +  N    
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKAL-KKDVVLIDDDVECTMVEKRVLALAWEN---- 55

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                           P +  L  TF+ K  ++ VME + GG+L   I +KG +    A+
Sbjct: 56  ----------------PFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRAT 99

Query: 155 MLIRQVLEAVDYMH 168
               +++  + ++H
Sbjct: 100 FYAAEIVCGLQFLH 113

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 27/136 (19%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE---NEIKVLRRFSQSVHNRL 92
           +LG G+F +V LAE +    ++A+KI+ KK +  ++D +E    E +VL    +      
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKIL-KKDVIIQDDDVECTMVEKRVLALPGKP----- 60

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                             P + QL   F+   ++Y VME V GG+L   I + G + E  
Sbjct: 61  ------------------PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPH 102

Query: 153 ASMLIRQVLEAVDYMH 168
           A     ++   + ++H
Sbjct: 103 AVFYAAEIAIGLFFLH 118

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 26/139 (18%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G F EV   + R  G ++A K ++KK LK K    E  + V +R    VH+R     
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAM-VEKRILAKVHSRF---- 54

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV----EKGSYTEKD 152
                           IV L   F+ K  + LVM ++ GG+L   I     E   + E  
Sbjct: 55  ----------------IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPR 98

Query: 153 ASMLIRQVLEAVDYMHEAR 171
           A     Q++  ++++H+ R
Sbjct: 99  ACFYTAQIISGLEHLHQRR 117

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 38/154 (24%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y    ++G G++ EV L   R +G  + +K ++ +    +E  + E E ++L        
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLL-------- 53

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKGSY 148
                            +L HPNIV   E++E +   +Y+VM    GG+L+ ++ E    
Sbjct: 54  ----------------SQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE---- 93

Query: 149 TEKDASMLIRQVLE-------AVDYMHEARYLSK 175
            +K   +   QV+E       A+ Y+HE   L +
Sbjct: 94  -QKGKLLPENQVVEWFVQIAMALQYLHEKHILHR 126

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 26/150 (17%)

Query: 21  EIKGPSIE-EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEI 78
           +I+   ++ E Y + +++G GAF EV+L   + +  ++A+K++ K + +K  + +   E 
Sbjct: 34  KIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEE 93

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           + +  F+ S                       P +VQL   F+D   +Y+VME + GG+L
Sbjct: 94  RDIMAFANS-----------------------PWVVQLFCAFQDDKYLYMVMEYMPGGDL 130

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + ++      EK A     +V+ A+D +H
Sbjct: 131 VN-LMSNYDVPEKWAKFYTAEVVLALDAIH 159

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 33/145 (22%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-----EIKVLRR 83
           EKY    L+G G++  V   + +E G + A+K    K L+ ++D +       EI++L++
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIK----KFLESEDDKMVKKIAMREIRMLKQ 56

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                   L H N+V LIE F  K ++YLV E V    L D   
Sbjct: 57  ------------------------LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK 92

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMH 168
                 E      + Q+L  +++ H
Sbjct: 93  YPNGLDESRVRKYLFQILRGIEFCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 19/133 (14%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           ++G G F EV      + G M+A+K +DKK +K K+     E   L   ++ +   L  T
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ----GETLAL---NERIMLSLVST 53

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
            D             P IV +   F    K+  +++L+ GG+L   + + G ++E +   
Sbjct: 54  GDC------------PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRF 101

Query: 156 LIRQVLEAVDYMH 168
              +++  +++MH
Sbjct: 102 YAAEIILGLEHMH 114

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 27/142 (19%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSV 88
           KY    ++G GAF  V L   + +  +  +K I  + + K +  + +NE +VL+      
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL----- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS- 147
                              L+HPNI++  E F +   + +VME   GG L + I ++ + 
Sbjct: 56  -------------------LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNS 96

Query: 148 -YTEKDASMLIRQVLEAVDYMH 168
              E        Q+L A+ ++H
Sbjct: 97  LLDEDTILHFFVQILLALHHVH 118

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 44.7 bits (105), Expect = 6e-06
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 25/148 (16%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL      
Sbjct: 3   EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL------ 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                              +   P + +   ++    K++++ME + GG   D ++E G 
Sbjct: 57  ------------------SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + ++R++L+ +DY+H  + + +
Sbjct: 98  LDETQIATILREILKGLDYLHSEKKIHR 125

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 29/139 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED----SLENEIKVLRRFSQSVHN 90
           ++LG G+F +V LAE +    ++A+K++ K  +   +D      E  I  L         
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA------- 53

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                              HP +  L   F+ K +++ VME V GG+L  +I     + E
Sbjct: 54  ------------------KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDE 95

Query: 151 KDASMLIRQVLEAVDYMHE 169
             +     +V  A+ ++H 
Sbjct: 96  PRSRFYAAEVTLALMFLHR 114

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 27/117 (23%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSV 88
           + + + LG G++  V   +   +   +A+K +D  ++  K +ED++ NEI++L     SV
Sbjct: 2   FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAV-NEIRIL----ASV 56

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                HPNI+   E F D +K+ +VME    G+L   I ++
Sbjct: 57  --------------------NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKR 93

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 44.6 bits (105), Expect = 8e-06
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 25/148 (16%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQS 87
           E Y + +++G GAF EV+L   +    ++A+K++ K + +K  + +   E + +  F+ S
Sbjct: 43  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 102

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P +VQL   F+D   +Y+VME + GG+L + ++    
Sbjct: 103 -----------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD 138

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             EK A     +V+ A+D +H   ++ +
Sbjct: 139 VPEKWARFYTAEVVLALDAIHSMGFIHR 166

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 44.3 bits (104), Expect = 9e-06
 Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 25/148 (16%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL      
Sbjct: 3   EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVL------ 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                              +   P I +   ++    K++++ME + GG   D +++ G 
Sbjct: 57  ------------------SQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALD-LLKPGP 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + ++R++L+ +DY+H  R + +
Sbjct: 98  LEETYIATILREILKGLDYLHSERKIHR 125

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 35/145 (24%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSL----ENEIKVLRRFSQSVHN 90
           +++G GAF EV+L   + +  ++A+K++ K  +  + DS     E +I      + S   
Sbjct: 49  KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMA---HANS--- 102

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY-- 148
                                 IVQL   F+D   +Y+VME + GG+L + +    +Y  
Sbjct: 103 --------------------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM---SNYDI 139

Query: 149 TEKDASMLIRQVLEAVDYMHEARYL 173
            EK A     +V+ A+D +H   ++
Sbjct: 140 PEKWARFYTAEVVLALDAIHSMGFI 164

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 106 ERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAV 164
            RL HPNIV L+++ E     ++ V E V G  L + +   G+    +   L+ QVL+A+
Sbjct: 33  ARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDAL 92

Query: 165 DYMHEA 170
              H  
Sbjct: 93  ACAHNQ 98

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 107 RLTHPNIVQLIETFEDKH--KVYLVMELVTG--GELFDRIVEKGSYTEKDASMLIRQVLE 162
            L HPNIV+L E    KH   ++LVME        L D +     ++E     L+ Q+L 
Sbjct: 62  NLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNM--PTPFSESQVKCLMLQLLR 119

Query: 163 AVDYMHE 169
            + Y+HE
Sbjct: 120 GLQYLHE 126

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 37/162 (22%)

Query: 25  PSIEEKYI-LKELLGTGAFSEVRLAESR----ENGTM-FAVKIIDKKALKGKEDSLENEI 78
           P +    I L   LG GAF EV     R    +   +  AVK + +   +  E     E 
Sbjct: 1   PEVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEA 60

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
            ++ +F+                        H NIV+LI    ++   ++++EL+ GG+L
Sbjct: 61  LIMSKFN------------------------HQNIVRLIGVSFERLPRFILLELMAGGDL 96

Query: 139 FD-------RIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                    R     S T KD     R V +   Y+ E  ++
Sbjct: 97  KSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFI 138

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 63/163 (38%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVK--------IID-KKALKGKEDSLENEIKV 80
           +Y L + +G+GA+  V  A  +  G   A+K        +ID K+ L+        EIK+
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILR--------EIKL 52

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI--------ETFEDKHKVYLVMEL 132
           LR                           H NI+ L+        E F D   VY+V   
Sbjct: 53  LRHLR------------------------HENIIGLLDILRPPSPEDFND---VYIVT-- 83

Query: 133 VTGGELFD----RIVEKGSY-TEKDASMLIRQVLEAVDYMHEA 170
               EL +    ++++     T+      + Q+L  + Y+H A
Sbjct: 84  ----ELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA 122

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 30/140 (21%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKII----DKKALKGKEDSLENEIKVLRRFSQSVHN 90
           +LLG GAF  V L    + G   A K +    +      +  +LE EI++L+        
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKN------- 60

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLV--MELVTGGELFDRIVEKGSY 148
                            L H  IVQ      D+ +  L   ME + GG + D++   G+ 
Sbjct: 61  -----------------LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGAL 103

Query: 149 TEKDASMLIRQVLEAVDYMH 168
           TE       RQ+LE + Y+H
Sbjct: 104 TESVTRKYTRQILEGMSYLH 123

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 27/148 (18%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           + +   +G G+F  V     + +  ++A+K ID   +  +E +   +E +VL        
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVL-------- 53

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGS- 147
                            +L    I++  E+F DK K+ +VME    G+L   + +++G  
Sbjct: 54  ----------------AKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRP 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E        Q+L  + ++H  + L +
Sbjct: 98  LPEDQVWRFFIQILLGLAHLHSKKILHR 125

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  + +G   AVK++D +  + +E  L NE+ ++R +            
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRE-LLFNEVVIMRDYQ----------- 76

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++ +++    +++++ME + GG L D IV +    E+  + +
Sbjct: 77  -------------HQNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATV 122

Query: 157 IRQVLEAVDYMH 168
              VL+A+ Y+H
Sbjct: 123 CESVLQALCYLH 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 28/147 (19%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDS-LENEIKVLRRFSQSVH 89
           ILK ++G GAF EV + + +  G ++A+KI++K + LK  E +    E  VL      V+
Sbjct: 5   ILK-VIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL------VN 57

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                         D+  +T      L   F+D++ +YLVM+   GG+L   + +     
Sbjct: 58  G-------------DRRWIT-----NLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRL 99

Query: 150 EKD-ASMLIRQVLEAVDYMHEARYLSK 175
            +D A   + +++ A+D +H+  Y+ +
Sbjct: 100 PEDMARFYLAEMVLAIDSVHQLGYVHR 126

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 26/139 (18%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           + L  KKDS    K+  + N++K     E +     LGTG+F  V LA  + N     V 
Sbjct: 7   LQLHKKKDSDST-KEPKRKNKMK----YEDFNFIRTLGTGSFGRVILATYK-NEDFPPVA 60

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
           I                    +RF +S   +  + +   S  K    + HP  V L  +F
Sbjct: 61  I--------------------KRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF 100

Query: 121 EDKHKVYLVMELVTGGELF 139
           +D+  +YLV+E V GGE F
Sbjct: 101 KDESYLYLVLEFVIGGEFF 119

Length = 340

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 21/133 (15%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V LAE +    ++A+KI+ KK +  ++D +E  +   R  + S        
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKIL-KKDVVIQDDDVECTMVEKRVLALSGKP----- 60

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                          P + QL   F+   ++Y VME V GG+L  +I + G + E  A  
Sbjct: 61  ---------------PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVF 105

Query: 156 LIRQVLEAVDYMH 168
              ++   + ++H
Sbjct: 106 YAAEIAIGLFFLH 118

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 17/31 (54%), Positives = 20/31 (64%)

Query: 110 HPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           HPNIV+LI     K  +Y+VMELV GG L  
Sbjct: 51  HPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 26/141 (18%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A+K ++ +  + K++ + NEI V+R     
Sbjct: 18  KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRE---- 72

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 HPNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 73  --------------------NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 111

Query: 148 YTEKDASMLIRQVLEAVDYMH 168
             E   + + R+ L+A++++H
Sbjct: 112 MDEGQIAAVCRECLQALEFLH 132

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 32/150 (21%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           EK +    LG GA   V     +  G +FA+K I                      +  +
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTI------------------TTDPNPDL 42

Query: 89  HNR-LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK--VYLVMELVTGGEL---FDRI 142
             + L E   N S          P IV+    F D+    + + ME   GG L   + ++
Sbjct: 43  QKQILRELEINKS-------CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKV 95

Query: 143 VEKGSYT-EKDASMLIRQVLEAVDYMHEAR 171
            ++G    EK    +   VL+ + Y+H  +
Sbjct: 96  KKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 61/159 (38%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVK---------IIDKKALKGKEDSLENEIK 79
           EKY     +G G++  V    +RE G + A+K         +I K AL+        EI+
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALR--------EIR 52

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L++                        L HPN+V LIE F  K K++LV E        
Sbjct: 53  MLKQ------------------------LKHPNLVNLIEVFRRKRKLHLVFEYC------ 82

Query: 140 DRIVEKGSYTEKDASM----------LIRQVLEAVDYMH 168
           D  V      E + +           +I Q L+AV++ H
Sbjct: 83  DHTV----LNELEKNPRGVPEHLIKKIIWQTLQAVNFCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 29/136 (21%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHNRLD 93
           ++G G++++V L   ++N  ++A+K++ K+ +   ED   ++ E  V  + S        
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-------- 53

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                          ++P +V L   F+   +++LV+E V GG+L   +  +    E+ A
Sbjct: 54  ---------------SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHA 98

Query: 154 SMLIRQVLEAVDYMHE 169
                ++  A++++HE
Sbjct: 99  RFYAAEICIALNFLHE 114

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 41.6 bits (97), Expect = 7e-05
 Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 27/142 (19%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQ 86
           +E + L + +G+G + +V  A +   G + A+K+I  K   G++   ++ EI +++    
Sbjct: 8   QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVI--KLEPGEDFAVVQQEIIMMK---- 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  H NIV    ++  + K+++ ME   GG L D     G
Sbjct: 62  --------------------DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG 101

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
             +E   + + R+ L+ + Y+H
Sbjct: 102 PLSESQIAYVSRETLQGLYYLH 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 30/106 (28%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS----LENEIKVLRRFSQSVHNRL 92
           LG G F EV   + +  G M+A K +DKK LK K       LE EI              
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEI-------------- 46

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                        E++  P IV L   FE K  + LVM L+ GG+L
Sbjct: 47  ------------LEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 41.6 bits (97), Expect = 7e-05
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 26/148 (17%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A+K ++ +  + K++ + NEI V+R     
Sbjct: 18  KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRE---- 72

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 73  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 111

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A+D++H  + + +
Sbjct: 112 MDEGQIAAVCRECLQALDFLHSNQVIHR 139

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 25/148 (16%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL      
Sbjct: 3   EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL------ 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                              +   P + +   ++    K++++ME + GG   D ++  G 
Sbjct: 57  ------------------SQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALD-LLRAGP 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
           + E   + +++++L+ +DY+H  + + +
Sbjct: 98  FDEFQIATMLKEILKGLDYLHSEKKIHR 125

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 41.6 bits (97), Expect = 9e-05
 Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 33/156 (21%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLR 82
           G S   +Y + + +G G F EV L + +     F  K I  + LK +E S L  E+ V+R
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMR 67

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFD 140
                                    L H NIV+ I+ F +K   K+Y++ME    G+L  
Sbjct: 68  ------------------------ELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDL-S 102

Query: 141 RIVEK-----GSYTEKDASMLIRQVLEAVDYMHEAR 171
           R ++K     G   E     + RQ+L A+ Y H  +
Sbjct: 103 RNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLK 138

Length = 1021

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 21/134 (15%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           ++LG G+F +V LAE +     FA+K + KK +   +D +E  +   R  S +       
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVLSLA------- 52

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                          HP +  L  TF+ K  ++ VME + GG+L   I     +    A+
Sbjct: 53  -------------WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRAT 99

Query: 155 MLIRQVLEAVDYMH 168
               +++  + ++H
Sbjct: 100 FYAAEIICGLQFLH 113

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHNRLD 93
           ++G G++++V L   ++   ++A+K++ K+ +   ED   ++ E  V  + S        
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN------- 54

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                           HP +V L   F+ + +++ V+E V GG+L   +  +    E+ A
Sbjct: 55  ----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 98

Query: 154 SMLIRQVLEAVDYMHE 169
                ++  A++Y+HE
Sbjct: 99  RFYSAEISLALNYLHE 114

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 33/130 (25%)

Query: 45  VRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSND 102
           V LA+ +   T+ AVK I+  +   KED   L+ EI   R+                   
Sbjct: 16  VHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQ----------------- 57

Query: 103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQ--- 159
                  HPNI+  + +F    ++Y+V  L+  G   D +  K  + E    + I     
Sbjct: 58  -------HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILK 108

Query: 160 -VLEAVDYMH 168
            VL A+DY+H
Sbjct: 109 DVLNALDYIH 118

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 27/149 (18%)

Query: 21  EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSL-ENEIK 79
           +I   + +  Y L + +G+G + +V  A +   G + AVKII  K   G + SL + EI 
Sbjct: 1   DILRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKII--KLEPGDDFSLIQQEIF 58

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +++                           H NIV    ++  + K+++ ME   GG L 
Sbjct: 59  MVKE------------------------CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQ 94

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D     G  +E   + + R+ L+ + Y+H
Sbjct: 95  DIYHVTGPLSELQIAYVCRETLQGLAYLH 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 26/148 (17%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A+K I+ +  + K++ + NEI V++     
Sbjct: 18  KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKE---- 72

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L +PNIV  +++F    ++++VME + GG L D +V +  
Sbjct: 73  --------------------LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETC 111

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 112 MDEAQIAAVCRECLQALEFLHANQVIHR 139

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 24/137 (17%)

Query: 37  LGTGAFSEVRLAESRE-NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           LG G F  V        +G    V +   K LK +E     + + LR    SV  +LD  
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAV---KTLK-QEHIAAGKKEFLRE--ASVMAQLD-- 54

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                         HP IV+LI   + +  + LVMEL   G L   + ++      D   
Sbjct: 55  --------------HPCIVRLIGVCKGE-PLMLVMELAPLGPLLKYLKKRREIPVSDLKE 99

Query: 156 LIRQVLEAVDYMHEARY 172
           L  QV   + Y+    +
Sbjct: 100 LAHQVAMGMAYLESKHF 116

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 30/139 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L   +G G F +V L + R            K A           +K L+  S +    L
Sbjct: 10  LGATIGKGEFGDVMLGDYRGQ----------KVA-----------VKCLKDDSTAAQAFL 48

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
            E             L HPN+VQL+      + +Y+V E +  G L D  R   +   T 
Sbjct: 49  AEA-------SVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITL 101

Query: 151 KDASMLIRQVLEAVDYMHE 169
                    V E ++Y+ E
Sbjct: 102 AQQLGFALDVCEGMEYLEE 120

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 27/133 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           ELLG G F EV     ++  T  AVK         KED L  E+K+  +F          
Sbjct: 1   ELLGKGNFGEVFKGTLKDK-TPVAVKTC-------KED-LPQELKI--KFLSEA------ 43

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                   +  ++  HPNIV+LI     +  +Y+VMELV GG+    + +K    E    
Sbjct: 44  --------RILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKD--ELKTK 93

Query: 155 MLIRQVLEAVDYM 167
            L++  L+A   M
Sbjct: 94  QLVKFALDAAAGM 106

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHNRLD 93
           ++G G++++V L E ++   ++A+K+I K+ +   ED   ++ E  V             
Sbjct: 2   VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVF------------ 49

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
           ET  N           HP +V L   F+ + +++ V+E V+GG+L   +  +    E+ A
Sbjct: 50  ETASN-----------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHA 98

Query: 154 SMLIRQVLEAVDYMHE 169
                ++  A++++HE
Sbjct: 99  RFYSAEISLALNFLHE 114

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 28/137 (20%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G +  V  A         A+K I ++      DS         R+ Q +H  +   
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPER------DS---------RYVQPLHEEI--- 56

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDAS 154
                       L H NIVQ + +  +     + ME V GG L   +  K G   + + +
Sbjct: 57  -------ALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQT 109

Query: 155 MLI--RQVLEAVDYMHE 169
           ++   +Q+LE + Y+H+
Sbjct: 110 IIFYTKQILEGLKYLHD 126

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 17/63 (26%), Positives = 37/63 (58%)

Query: 110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +PN ++L  +        L+M+ +  G+LFD + ++G  +E +   +IRQ++EA++ +H+
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK 127

Query: 170 ARY 172
              
Sbjct: 128 HNI 130

Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVHNR 91
           EL+G GA+  V   +    G + A+KII+   L   +D + +   E+ +L +  QS    
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRVVALKIIN---LDTPDDDVSDIQREVALLSQLRQS---- 59

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
                              PNI +   ++    +++++ME   GG +   +++ G   EK
Sbjct: 60  -----------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT-LMKAGPIAEK 101

Query: 152 DASMLIRQVLEAVDYMHEA 170
             S++IR+VL A+ Y+H+ 
Sbjct: 102 YISVIIREVLVALKYIHKV 120

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 28/140 (20%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLD 93
           +LG G F EV   + R  G M+A K ++KK +K +  E    NE ++L +    V++R  
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEK----VNSRF- 61

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEK 151
                              +V L   +E K  + LV+ L+ GG+L   I   G   + E 
Sbjct: 62  -------------------VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG 102

Query: 152 DASMLIRQVLEAVDYMHEAR 171
            A     ++   ++ +H+ R
Sbjct: 103 RAVFYAAEICCGLEDLHQER 122

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 107 RLTHPNIVQLIETF--EDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEA 163
           +L HPNIV + E     +  K+Y+VME V   +L   +   K  + + +   L+ Q+L  
Sbjct: 60  KLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSG 118

Query: 164 VDYMHE 169
           V ++H+
Sbjct: 119 VAHLHD 124

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 31/143 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           LKEL G+G F  V L + R      A+K+I + A+   ED    E KV+ + S       
Sbjct: 9   LKEL-GSGQFGVVHLGKWR-GKIDVAIKMIREGAMS--EDDFIEEAKVMMKLS------- 57

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
                            HPN+VQL      +  +++V E +  G L +  R  +    TE
Sbjct: 58  -----------------HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTE 100

Query: 151 KDASMLIRQVLEAVDYMHEARYL 173
               M    V EA++Y+    ++
Sbjct: 101 WLLDMCS-DVCEAMEYLESNGFI 122

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 39.3 bits (91), Expect = 5e-04
 Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + + +++G GAF EV + + +    +FA+KI+             N+ ++L+R   + 
Sbjct: 1   EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKIL-------------NKWEMLKRAETAC 47

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGS 147
                E  D   N  ++       I  L   F+D++ +YLVM+   GG+L   + + +  
Sbjct: 48  ---FREERDVLVNGDNQW------ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR 98

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E  A   + +++ A+D +H+  Y+ +
Sbjct: 99  LPEDMARFYLAEMVIAIDSVHQLHYVHR 126

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 32/152 (21%)

Query: 31  YILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           + +++ +G G FSEV  A     R+   +  V+I +    K ++D ++ EI +L++    
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVK-EIDLLKQ---- 58

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV---- 143
                               L HPN+++ +++F + +++ +V+EL   G+L   I     
Sbjct: 59  --------------------LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKK 98

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
           +K    E+       Q+  AV++MH  R + +
Sbjct: 99  QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 28/142 (19%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLD 93
           +LG G F EV   + R  G M+A K ++KK +K +  E    NE ++L            
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL------------ 54

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEK 151
                       E++    +V L   +E K  + LV+ L+ GG+L   I   G+  + E+
Sbjct: 55  ------------EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEE 102

Query: 152 DASMLIRQVLEAVDYMHEARYL 173
            A     ++   ++ +H  R +
Sbjct: 103 RAVFYAAEITCGLEDLHRERIV 124

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 73

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 74  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 112

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHR 140

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 46/157 (29%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           +  +Y   E +G+GA+  V  A    +G   A+K I          K+ L+        E
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLR--------E 54

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK----VYLVMELV 133
           +K+LR F                         H NI+ + +           VY+VM+L+
Sbjct: 55  LKILRHFK------------------------HDNIIAIRDILRPPGADFKDVYVVMDLM 90

Query: 134 TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
              +L   I      TE+     + Q+L  + Y+H A
Sbjct: 91  -ESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA 126

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 26/132 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  +  G   AVK +D +  + +E  L NE+ ++R +            
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRE-LLFNEVVIMRDYH----------- 77

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V +  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 78  -------------HENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATV 123

Query: 157 IRQVLEAVDYMH 168
              VL A+ Y+H
Sbjct: 124 CLSVLRALSYLH 135

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 32/152 (21%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVK---IIDKKALKGKEDSLENEIKVLRRFSQS 87
           + +++ +G G FSEV  A    +G   A+K   I D    K + D ++ EI +L++    
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQ---- 58

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI----V 143
                               L HPN+++   +F + +++ +V+EL   G+L   I     
Sbjct: 59  --------------------LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK 98

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
           +K    EK       Q+  A+++MH  R + +
Sbjct: 99  QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 33/151 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L EL+G G + +V      + G + A+K++D      +E+ ++ EI +L+++S       
Sbjct: 10  LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSH------ 61

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKG 146
                            H NI      F  K+      +++LVME    G + D I    
Sbjct: 62  -----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 104

Query: 147 SYTEKDA--SMLIRQVLEAVDYMHEARYLSK 175
             T K+   + + R++L  + ++H+ + + +
Sbjct: 105 GNTLKEEWIAYICREILRGLSHLHQHKVIHR 135

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 41/158 (25%)

Query: 25  PSIEE--KYILKELLGTGAFSEVRLAESRENGTMFAVK-IIDKKALKGKEDSLENEIKVL 81
           P  +E  KY     +G G F EV  A  ++   + A+K ++ +   +G   +   EIK+L
Sbjct: 6   PFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKIL 65

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--------TFEDKHKVYLVMELV 133
                                   + L H N+V LIE            K   YLV E  
Sbjct: 66  ------------------------QLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFC 101

Query: 134 T---GGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
                G L ++ V+   +T  +   +++ +L  + Y+H
Sbjct: 102 EHDLAGLLSNKNVK---FTLSEIKKVMKMLLNGLYYIH 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 26/141 (18%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           E LG G ++ V    +R  G + A+K I   A +G   +   EI +++            
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMK------------ 53

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG--ELFDRIVEKGSYTEKD 152
                        L H NIV+L +    ++K+ LV E +     +  D    +G+     
Sbjct: 54  ------------ELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNT 101

Query: 153 ASMLIRQVLEAVDYMHEARYL 173
                 Q+L+ + + HE R L
Sbjct: 102 VKSFTYQLLKGIAFCHENRVL 122

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 22/133 (16%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           L+  GA+  V L   +E    FA+K I+K+ L      L N+I+      Q    R   T
Sbjct: 8   LISNGAYGAVYLVRHKETRQRFAMKKINKQNL-----ILRNQIQ------QVFVERDILT 56

Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
              N           P +V +  +FE K  + +VME V GG+    +   G+     A M
Sbjct: 57  FAEN-----------PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARM 105

Query: 156 LIRQVLEAVDYMH 168
              + + A++Y+H
Sbjct: 106 YFAETVLALEYLH 118

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 27/137 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G    V     R  G + AVK I  +  +  +  +  E+ +L               
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILH-------------- 54

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDAS 154
                     +   P IV     F +   + + ME + GG L D+I++  +G   E+   
Sbjct: 55  ----------KCNSPYIVGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILG 103

Query: 155 MLIRQVLEAVDYMHEAR 171
            +   VL+ + Y+HE  
Sbjct: 104 KIAVAVLKGLTYLHEKH 120

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 43/154 (27%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y     +G+GA+ +V  A   + G   A+K                  K+ R F  ++
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIK------------------KLSRPFQSAI 56

Query: 89  HNR--LDETNDNNSNDKDKERL----THPNIVQLIETF------EDKHKVYLVMELVTGG 136
           H +    E            RL     H N++ L++ F      ED   VYLV  L+ G 
Sbjct: 57  HAKRTYREL-----------RLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GA 104

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           +L + IV+    ++     L+ Q+L  + Y+H A
Sbjct: 105 DL-NNIVKCQKLSDDHIQFLVYQILRGLKYIHSA 137

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 26/132 (19%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  + +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 75

Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 76  -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 121

Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 122 CLAVLKALSVLH 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 30/144 (20%)

Query: 35  ELLGTGAFSEVRLAE-SRENGTMF--AVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           + LG G+F  VR  E S   G +   AVK +       K D L + +    + +  +H  
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCL-------KSDKLSDIMDDFLKEAAIMH-- 51

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI--VEKGSYT 149
                           L H N+++L       H + +V EL   G L DR+     G + 
Sbjct: 52  ---------------SLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFL 95

Query: 150 EKDASMLIRQVLEAVDYMHEARYL 173
                    Q+   + Y+   R++
Sbjct: 96  ISTLCDYAVQIANGMRYLESKRFI 119

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 47/157 (29%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID--------KKALKGKEDSLENEI 78
           +  +Y     +G GA+  V  A  +  G   A+K I         ++ L+        EI
Sbjct: 3   VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR--------EI 54

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI-----VQLIETFEDKHKVYLVMELV 133
           K+LRRF                         H NI     +    +FE  + VY+V EL+
Sbjct: 55  KILRRFK------------------------HENIIGILDIIRPPSFESFNDVYIVQELM 90

Query: 134 TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
              +L+ ++++    +       + Q+L  + Y+H A
Sbjct: 91  E-TDLY-KLIKTQHLSNDHIQYFLYQILRGLKYIHSA 125

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 32/160 (20%), Positives = 69/160 (43%), Gaps = 34/160 (21%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
           P   + + + E +G G + +V    +++NG+  AVKI+D   +   ++ +E E  +L+  
Sbjct: 14  PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILD--PIHDIDEEIEAEYNILKAL 71

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV-----YLVMELVTGGELF 139
           S                        HPN+V+    +  K        +LV+EL  GG + 
Sbjct: 72  SD-----------------------HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVT 108

Query: 140 DRI---VEKGS-YTEKDASMLIRQVLEAVDYMHEARYLSK 175
           D +   +++G    E   + ++ + L  + ++H  + + +
Sbjct: 109 DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHR 148

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 36/136 (26%)

Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----EIKVLRRFSQSVHNRL 92
           +G+GA   V     R  G ++A+K+I        ED++      EI++LR          
Sbjct: 82  IGSGAGGTVYKVIHRPTGRLYALKVI----YGNHEDTVRRQICREIEILRD--------- 128

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                          + HPN+V+  + F+   ++ +++E + GG L    +      E+ 
Sbjct: 129 ---------------VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD----EQF 169

Query: 153 ASMLIRQVLEAVDYMH 168
            + + RQ+L  + Y+H
Sbjct: 170 LADVARQILSGIAYLH 185

Length = 353

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 28/100 (28%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENE-----IKVLR 82
            +     E LG G F EV L E        A  + D       E+   +      +KVLR
Sbjct: 4   RQPLNFVEKLGEGQFGEVHLCE--------ADGLQDFSEKAFAENDNADAPVLVAVKVLR 55

Query: 83  RFSQSVHNRLDETNDNNSNDKDKE-----RLTHPNIVQLI 117
                      + +DN   D  KE     RL+ PNI +L+
Sbjct: 56  ----------PDASDNAREDFLKEVKILSRLSDPNIARLL 85

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 31/152 (20%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
           PS  E   +KEL G+G F  V L + R    + A+K I++ A+   E+    E KV+ + 
Sbjct: 3   PS--ELTFMKEL-GSGQFGVVHLGKWRAQIKV-AIKAINEGAMS--EEDFIEEAKVMMK- 55

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L+HP +VQL      +  +Y+V E +  G L + + +
Sbjct: 56  -----------------------LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ 92

Query: 145 KGSYTEKDASMLIRQ-VLEAVDYMHEARYLSK 175
           +     KD  + + Q V E ++Y+    ++ +
Sbjct: 93  RQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 34/150 (22%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           E +G G + +V    ++++G++ AVKI+D   +   ++ +E E  +L+            
Sbjct: 28  ETIGKGTYGKVYKVTNKKDGSLAAVKILD--PISDVDEEIEAEYNILQSLPN-------- 77

Query: 95  TNDNNSNDKDKERLTHPNIVQLIETF--EDKH---KVYLVMELVTGG---ELFDRIVEKG 146
                          HPN+V+    F   DK    +++LV+EL  GG   EL   ++  G
Sbjct: 78  ---------------HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICG 122

Query: 147 S-YTEKDASMLIRQVLEAVDYMHEARYLSK 175
               E   S ++   L  + ++H  R + +
Sbjct: 123 QRLDEAMISYILYGALLGLQHLHNNRIIHR 152

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM 167
           ++H  I+ LI  +  K  V +VM      +LF  +   G    + A  + R++LEA+ Y+
Sbjct: 143 ISHRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYL 201

Query: 168 HE 169
           H 
Sbjct: 202 HG 203

Length = 392

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 26/96 (27%)

Query: 95  TNDNNSNDKDKER----------LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
           T  N ++   +E+            HP+IV+LI    +   V++VMEL   GEL      
Sbjct: 41  TCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVWIVMELAPLGEL------ 93

Query: 145 KGSYTEKDASML--------IRQVLEAVDYMHEARY 172
             SY + +   L          Q+  A+ Y+   R+
Sbjct: 94  -RSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF 128

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
KOG0595|consensus	429		99.98
KOG0615|consensus	475		99.97
KOG0575|consensus	592		99.97
KOG0598|consensus	357		99.95
KOG0611|consensus	668		99.94
KOG0583|consensus	370		99.94
KOG0605|consensus	550		99.94
KOG0581|consensus	364		99.94
KOG0592|consensus	604		99.94
KOG0600|consensus	560		99.94
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.93
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.93
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.93
KOG0032|consensus	382		99.93
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.93
KOG0582|consensus	516		99.93
KOG0588|consensus	786		99.93
KOG0610|consensus	459		99.93
KOG0616|consensus	355		99.93
KOG0661|consensus	538		99.93
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.92
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.92
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.92
KOG0597|consensus	808		99.92
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.92
KOG0659|consensus	318		99.92
KOG0198|consensus	313		99.92
KOG0585|consensus	576		99.92
KOG0580|consensus	281		99.92
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.91
KOG0192|consensus	362		99.91
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.91
KOG0593|consensus	396		99.91
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.91
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.91
KOG0594|consensus	323		99.91
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.91
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.9
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.9
KOG0694|consensus	694		99.9
KOG0194|consensus	474		99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
KOG0663|consensus	419		99.9
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.9
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.9
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.9
KOG0586|consensus	596		99.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.9
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.9
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.9
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.9
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.9
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.9
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.9
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.9
KOG0197|consensus	468		99.9
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.9
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.9
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.9
KOG0607|consensus	463		99.89
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.89
KOG0591|consensus	375		99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.89
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.89
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.89
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.89
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
KOG0589|consensus	426		99.89
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.89
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.89
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.89
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.89
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.89
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.89
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.89
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.89
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.89
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.89
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.89
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.89
KOG0578|consensus	550		99.89
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.89
KOG4250|consensus	732		99.88
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.88
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
KOG0033|consensus	355		99.88
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.88
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.88
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.88
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.88
KOG0667|consensus	586		99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.88
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.88
PTZ00267	478	NIMA-related protein kinase; Provisional	99.88
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
KOG0660|consensus	359		99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.88
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.88
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.87
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.87
KOG0193|consensus	678		99.87
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.87
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.87
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.87
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.87
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.87
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.87
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.87
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.87
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.87
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.87
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.87
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.87
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.87
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.87
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.87
KOG0201|consensus	467		99.87
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.87
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.87
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.87
KOG0658|consensus	364		99.87
PTZ00283	496	serine/threonine protein kinase; Provisional	99.87
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.86
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.86
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.86
KOG0612|consensus	1317		99.86
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.86
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.86
PTZ00036	440	glycogen synthase kinase; Provisional	99.86
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.86
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.86
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.86
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.86
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.86
KOG4236|consensus	888		99.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.86
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.86
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.86
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.86
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.86
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.86
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.86
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.86
KOG1152|consensus	772		99.86
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.86
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.86
PHA03207	392	serine/threonine kinase US3; Provisional	99.86
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.86
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.86
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.86
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.86
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.86
KOG0574|consensus	502		99.86
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.86
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.86
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.86
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.86
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.86
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.86
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.86
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.86
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.86
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.85
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.85
KOG0662|consensus	292		99.85
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.85
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.85
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.85
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.85
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.85
KOG0584|consensus	632		99.85
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.85
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.85
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.85
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.85
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.85
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.85
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.85
KOG4279|consensus	1226		99.85
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.85
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.85
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.85
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.85
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.85
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.85
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.85
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.85
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.85
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.85
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.85
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.85
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.85
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.85
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.85
KOG1290|consensus	590		99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.85
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.85
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.85
PLN00009	294	cyclin-dependent kinase A; Provisional	99.85
KOG1187|consensus	361		99.85
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.85
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.85
PHA03209	357	serine/threonine kinase US3; Provisional	99.85
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.85
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.84
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.84
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.84
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.84
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.84
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.84
PHA03211	461	serine/threonine kinase US3; Provisional	99.84
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.84
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.84
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.84
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.84
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.84
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.84
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.84
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.84
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.84
KOG4717|consensus	864		99.84
KOG1026|consensus	774		99.84
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.84
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.84
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.84
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.84
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.84
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.84
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.83
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.83
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.83
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.83
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.83
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.83
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.83
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.83
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.83
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.83
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.83
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.83
KOG0599|consensus	411		99.83
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.83
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.83
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.83
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.83
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.83
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.83
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.83
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.83
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.83
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.83
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.83
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.83
KOG0690|consensus	516		99.83
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.83
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.83
KOG2052|consensus	513		99.83
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.83
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.83
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.83
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.82
KOG1095|consensus	1025		99.82
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.82
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.82
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.82
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.82
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.82
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.82
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.82
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.82
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.82
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.82
KOG0666|consensus	438		99.82
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.82
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.82
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.82
KOG1035|consensus	1351		99.82
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.82
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.82
KOG1989|consensus	738		99.82
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.81
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.81
KOG0608|consensus	1034		99.81
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.81
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.81
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.81
PHA02988	283	hypothetical protein; Provisional	99.81
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.81
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.81
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.81
KOG0577|consensus	948		99.81
PHA03210	501	serine/threonine kinase US3; Provisional	99.81
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.81
PRK09188	365	serine/threonine protein kinase; Provisional	99.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.8
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.8
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.8
KOG0604|consensus	400		99.8
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.8
KOG0579|consensus	1187		99.8
KOG1094|consensus	807		99.8
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.8
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.8
KOG4645|consensus	1509		99.8
KOG0587|consensus	953		99.8
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.79
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.79
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.79
KOG4721|consensus	904		99.79
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.79
KOG0199|consensus	1039		99.79
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.79
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.79
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.78
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.78
KOG2345|consensus	302		99.78
KOG4278|consensus	1157		99.78
KOG0695|consensus	593		99.78
KOG0668|consensus	338		99.78
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.78
KOG0671|consensus	415		99.78
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.78
KOG1163|consensus	341		99.77
KOG0196|consensus	996		99.77
KOG1151|consensus	775		99.77
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.76
PHA02882	294	putative serine/threonine kinase; Provisional	99.76
KOG0576|consensus	829		99.75
KOG4257|consensus	974		99.75
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.75
PRK10345	210	hypothetical protein; Provisional	99.75
KOG1025|consensus	1177		99.74
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.74
KOG0696|consensus	683		99.74
KOG1164|consensus	322		99.72
KOG3653|consensus	534		99.72
KOG0986|consensus	591		99.71
KOG1345|consensus	378		99.7
KOG1167|consensus	418		99.7
KOG0614|consensus	732		99.69
KOG1165|consensus	449		99.69
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.69
smart00090	237	RIO RIO-like kinase.	99.66
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.66
KOG0603|consensus	612		99.66
KOG0669|consensus	376		99.65
KOG0664|consensus	449		99.65
KOG0200|consensus	609		99.65
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.65
PRK14879	211	serine/threonine protein kinase; Provisional	99.64
KOG0596|consensus	677		99.64
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.63
KOG1006|consensus	361		99.61
KOG0984|consensus	282		99.6
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.6
KOG0983|consensus	391		99.57
KOG0670|consensus	752		99.55
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.55
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.51
KOG0665|consensus	369		99.5
PRK12274	218	serine/threonine protein kinase; Provisional	99.49
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.47
KOG1027|consensus	903		99.47
KOG1166|consensus	974		99.46
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.4
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.32
KOG1024|consensus	563		99.3
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.26
KOG0590|consensus	601		98.98
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.98
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.98
KOG4158|consensus	598		98.97
KOG1240|consensus	1431		98.97
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.94
PLN00181	793	protein SPA1-RELATED; Provisional	98.89
KOG3087|consensus	229		98.88
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.84
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.81
KOG0195|consensus	448		98.77
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.75
KOG1243|consensus	690		98.71
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.66
KOG0603|consensus	612		98.51
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.5
KOG3741|consensus	655		98.38
KOG0601|consensus	524		98.27
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.24
KOG0590|consensus	601		98.22
KOG1266|consensus	458		98.12
KOG1235|consensus	538		98.07
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.06
KOG0601|consensus	524		97.96
PRK09902	216	hypothetical protein; Provisional	97.88
KOG0606|consensus	1205		97.77
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.75
PLN02876	822	acyl-CoA dehydrogenase	97.68
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.66
KOG1023|consensus	484		97.64
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.63
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.55
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.44
PF01636	239	APH: Phosphotransferase enzyme family This family	97.43
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.25
PRK10593	297	hypothetical protein; Provisional	97.12
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.07
KOG0606|consensus	1205		96.68
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.66
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.58
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.33
KOG2270|consensus	520		95.83
KOG1033|consensus	516		94.89
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.54
KOG0576|consensus	829		94.53
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.3
PRK12396	409	5-methylribose kinase; Reviewed	94.09
KOG1035|consensus	1351		93.77
PLN02756	418	S-methyl-5-thioribose kinase	93.43
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.62
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	92.29
KOG1033|consensus	516		92.08
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	90.77
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	90.02
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	89.54
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	88.73
KOG2268|consensus	465		87.55
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	84.53
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	82.48
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	82.34

>KOG0595|consensus

Probab=99.98  E-value=9e-32  Score=199.57  Aligned_cols=128  Identities=36%  Similarity=0.600  Sum_probs=118.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...+.|.+.+.||.|+|+.||+|+++.++..||||.+.+... ....+.+..|++++++                     
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLke---------------------   65 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKE---------------------   65 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHh---------------------
Confidence            345579999999999999999999999999999999987653 2344667899999999                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+.++++...++++|+|||||+||+|.++++..+.+++..++.++.||+.||++||+++||||||
T Consensus        66 ---l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDL  135 (429)
T KOG0595|consen   66 ---LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDL  135 (429)
T ss_pred             ---cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence               8999999999999999999999999999999999999999999999999999999999999999999997

>KOG0615|consensus

Probab=99.97  E-value=1.4e-30  Score=193.60  Aligned_cols=132  Identities=37%  Similarity=0.672  Sum_probs=120.8

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc------chhHHHHHHHHHhhccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK------EDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~------~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ..+..+.+.|.+.+.||+|+||.|.+|..+++++.||||++.++.....      ...+.+|++++++            
T Consensus       165 ~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkk------------  232 (475)
T KOG0615|consen  165 VPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKK------------  232 (475)
T ss_pred             CccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHh------------
Confidence            4445588899999999999999999999999999999999987755432      2335699999999            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                                  ++||||++++++|+.+.+.|+||||+.||+|++++..++.+.++.-+.++.|++.|+.|||++||+||
T Consensus       233 ------------L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HR  300 (475)
T KOG0615|consen  233 ------------LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHR  300 (475)
T ss_pred             ------------cCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccc
Confidence                        89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       301 Di  302 (475)
T KOG0615|consen  301 DI  302 (475)
T ss_pred             cC
Confidence            97

>KOG0575|consensus

Probab=99.97  E-value=1.8e-29  Score=195.19  Aligned_cols=125  Identities=34%  Similarity=0.619  Sum_probs=117.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .+|...+.||.|+|++||.+++..+++.||+|++++.....  ..+.+.+|+++.+.                       
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~-----------------------   74 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRS-----------------------   74 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHh-----------------------
Confidence            68999999999999999999999999999999998865433  34678899999999                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||++++++|++.+++|+|+|+|..++|..+++.+++++|++++.++.||+.||.|||++|||||||
T Consensus        75 -L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDL  144 (592)
T KOG0575|consen   75 -LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDL  144 (592)
T ss_pred             -cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence             8999999999999999999999999999999999999999999999999999999999999999999997

>KOG0598|consensus

Probab=99.95  E-value=3.4e-27  Score=173.42  Aligned_cols=129  Identities=26%  Similarity=0.570  Sum_probs=118.8

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+++.||.|+||+|+.++.+.+++.||+|++++...-..  .....+|..++..                   
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~-------------------   81 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK-------------------   81 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh-------------------
Confidence            3446789999999999999999999999999999999987654333  4567889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||+|+.++..|++...+|+|+||+.||.|+..+.+.+.++++.++.|+.+|+.||.|||++|||||||
T Consensus        82 -----v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDl  151 (357)
T KOG0598|consen   82 -----IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDL  151 (357)
T ss_pred             -----CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence                 8999999999999999999999999999999999999999999999999999999999999999999997

>KOG0611|consensus

Probab=99.94  E-value=9.5e-28  Score=179.08  Aligned_cols=137  Identities=36%  Similarity=0.678  Sum_probs=124.1

Q ss_pred             CCCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccch--hHHHHHHHHHhhcccccccccc
Q psy13106         17 GKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        17 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      +.......-.+.-+|.+.+.||.|+||.|.+|.+...++.||||.|.+......++  .+.+|++++..           
T Consensus        41 gvkrhhhkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSs-----------  109 (668)
T KOG0611|consen   41 GVKRHHHKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSS-----------  109 (668)
T ss_pred             cccccCcccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhh-----------
Confidence            33334444556668999999999999999999999999999999999887766553  57899999998           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                                   ++||||+.+|..|+..+.+.+||||..+|.|.+|+.+++.+++.+++.+++||+.|+.|||.++++|
T Consensus       110 -------------LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvH  176 (668)
T KOG0611|consen  110 -------------LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVH  176 (668)
T ss_pred             -------------cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcccee
Confidence                         9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       177 RDL  179 (668)
T KOG0611|consen  177 RDL  179 (668)
T ss_pred             ccc
Confidence            997

>KOG0583|consensus

Probab=99.94  E-value=3.1e-26  Score=174.70  Aligned_cols=129  Identities=41%  Similarity=0.703  Sum_probs=116.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc----ccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK----GKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....+.|.+.+.||.|+||.|+.|.+..+++.+|+|++......    .....+.+|+.+++.                 
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~-----------------   75 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRR-----------------   75 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHH-----------------
Confidence            35567899999999999999999999999999999987664221    234567789988888                 


Q ss_pred             cccccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             +. ||||+++++++.....+|+|||||.||+|++++...+++.+..++.++.|++.|++|||++||+||||
T Consensus        76 -------~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDL  146 (370)
T KOG0583|consen   76 -------LRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDL  146 (370)
T ss_pred             -------hccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCC
Confidence                   67 99999999999999999999999999999999999889999999999999999999999999999997

>KOG0605|consensus

Probab=99.94  E-value=2e-26  Score=176.16  Aligned_cols=127  Identities=29%  Similarity=0.575  Sum_probs=117.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      -.++|.+++.||+|+||.||+|+.+.||..+|+|++++...-.  +...+.+|..+|..                     
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~---------------------  197 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE---------------------  197 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh---------------------
Confidence            4568999999999999999999999999999999998775432  33567788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .++++|++++..|++..++||+|||++||++..+|...+.+++++++.|+.+++.|++-+|+.|||||||
T Consensus       198 ---~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDI  267 (550)
T KOG0605|consen  198 ---VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDI  267 (550)
T ss_pred             ---cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccC
Confidence               7899999999999999999999999999999999999999999999999999999999999999999998

>KOG0581|consensus

Probab=99.94  E-value=2.4e-26  Score=169.06  Aligned_cols=126  Identities=23%  Similarity=0.363  Sum_probs=115.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ......+..||.|+.|+|+++.++.+++.+|+|.|..........++.+|++++++                        
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~------------------------  133 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRS------------------------  133 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhh------------------------
Confidence            34677889999999999999999999999999999554444455789999999999                        


Q ss_pred             CCCCCceeeEEEEecCCe-EEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHK-VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      .+||||+.+|+.|..+.. ++++||||++|+|.+++...+.+++.....++.++++||.|||+ ++||||||
T Consensus       134 ~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDI  205 (364)
T KOG0581|consen  134 CQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDI  205 (364)
T ss_pred             CCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccC
Confidence            899999999999999885 99999999999999999988899999999999999999999996 99999997

>KOG0592|consensus

Probab=99.94  E-value=2e-26  Score=176.46  Aligned_cols=129  Identities=30%  Similarity=0.580  Sum_probs=115.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....+|.+++.||.|+|++|++|.++.+++.||||++.++-.-.  ...-+.+|-.+|..++                  
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~------------------  131 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS------------------  131 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh------------------
Confidence            33557999999999999999999999999999999987664322  2344567777787732                  


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +||.|++++..|.+...+|+|+||+++|+|.+++..-+.|++.+++.++.||++||+|||++|||||||
T Consensus       132 -----~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDl  200 (604)
T KOG0592|consen  132 -----GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDL  200 (604)
T ss_pred             -----CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccC
Confidence                 899999999999999999999999999999999999999999999999999999999999999999997

>KOG0600|consensus

Probab=99.94  E-value=2.4e-26  Score=174.80  Aligned_cols=128  Identities=31%  Similarity=0.498  Sum_probs=112.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +...+.|...++||.|+||.||+|++..+++.||+|.+...... .......+|+.++++                    
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~--------------------  172 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR--------------------  172 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh--------------------
Confidence            34455788899999999999999999999999999999876533 334667899999999                    


Q ss_pred             ccccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++.+...+.  .++|+|+|||++ +|.-++...+ .|++.++..++.||+.||+|||++||+||||
T Consensus       173 ----l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDI  244 (560)
T KOG0600|consen  173 ----LDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDI  244 (560)
T ss_pred             ----cCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccc
Confidence                9999999999998866  789999999977 8888876543 5999999999999999999999999999997

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.4e-25  Score=169.30  Aligned_cols=125  Identities=25%  Similarity=0.530  Sum_probs=112.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+++.||.|+||.||++.+..+++.+|||++......  .....+.+|+.++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-----------------------   57 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-----------------------   57 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-----------------------
Confidence            3699999999999999999999999999999998654321  122456778888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.++..+|+||||+++++|.+++.....+++..++.++.|++.||+|||++||+||||
T Consensus        58 -l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDl  127 (377)
T cd05629          58 -SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDI  127 (377)
T ss_pred             -CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=6.7e-25  Score=167.97  Aligned_cols=125  Identities=26%  Similarity=0.583  Sum_probs=112.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+|||++.......  ....+..|+.++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-----------------------   57 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-----------------------   57 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999997543211  22446678888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+.+++.+|++||||++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        58 -l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dl  127 (364)
T cd05599          58 -ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDI  127 (364)
T ss_pred             -CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.93  E-value=9e-25  Score=167.33  Aligned_cols=125  Identities=26%  Similarity=0.558  Sum_probs=111.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+..|+.++..                       
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-----------------------   57 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-----------------------   57 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHh-----------------------
Confidence            46899999999999999999999999999999997543211  22456678888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+.+...+|++||||++++|.+++...+.+++..++.++.|++.||+|||++||+||||
T Consensus        58 -~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDl  127 (363)
T cd05628          58 -ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI  127 (363)
T ss_pred             -CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0032|consensus

Probab=99.93  E-value=9e-25  Score=166.92  Aligned_cols=130  Identities=48%  Similarity=0.796  Sum_probs=119.4

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....+.+.|.+.+.||+|.||.|+.|..+.+++.+|+|.+++.......  ..+.+|+.+++.                 
T Consensus        29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~-----------------   91 (382)
T KOG0032|consen   29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQ-----------------   91 (382)
T ss_pred             ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHh-----------------
Confidence            4556677899999999999999999999999999999999887765443  678999999999                 


Q ss_pred             cccccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             +. ||||+.+++.|++...+++|||+|.||.|++.+... .+++..+..++.|++.+++|||+.||+||||
T Consensus        92 -------l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDl  161 (382)
T KOG0032|consen   92 -------LSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDL  161 (382)
T ss_pred             -------ccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence                   65 999999999999999999999999999999999877 4999999999999999999999999999997

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.93  E-value=1.2e-24  Score=167.22  Aligned_cols=124  Identities=23%  Similarity=0.485  Sum_probs=112.0

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||.|+||.||++.+..+++.+|+|++......  .....+.+|+.++..                        
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~------------------------   57 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE------------------------   57 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHh------------------------
Confidence            699999999999999999999999999999998654321  123456788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.+.+++.+|++||||++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDl  127 (376)
T cd05598          58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDI  127 (376)
T ss_pred             CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0582|consensus

Probab=99.93  E-value=1.5e-24  Score=163.01  Aligned_cols=133  Identities=29%  Similarity=0.478  Sum_probs=120.9

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ........++|.+.+.||.|..+.||+|+..-+++.||||.+.....+..-+.+.+|+..++.                 
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl-----------------   80 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSL-----------------   80 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhh-----------------
Confidence            345556677999999999999999999999999999999999887766666888999988888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||++++..|.....+|+||+|+.+|++.++++..-  .+++..+..+++++++||.|||.+|.||||+
T Consensus        81 -------~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdv  152 (516)
T KOG0582|consen   81 -------IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDV  152 (516)
T ss_pred             -------cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence                   899999999999999999999999999999999997543  2999999999999999999999999999997

>KOG0588|consensus

Probab=99.93  E-value=2.6e-25  Score=173.85  Aligned_cols=129  Identities=36%  Similarity=0.631  Sum_probs=118.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-c-cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-G-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....+.|.+++.||.|+.|.|.+|++..||+.+|||+|+++..- . ....+++|+.+|+-                   
T Consensus         8 ~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkL-------------------   68 (786)
T KOG0588|consen    8 KNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKL-------------------   68 (786)
T ss_pred             cccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHH-------------------
Confidence            34556899999999999999999999999999999999877322 2 23678999999998                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +.|||++.+++.|+.+.++|+|.||+++|.|++++.+.++++++++..+++||+.|+.|||..+|+||||
T Consensus        69 -----i~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDL  138 (786)
T KOG0588|consen   69 -----IEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDL  138 (786)
T ss_pred             -----hcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccC
Confidence                 8999999999999999999999999999999999999999999999999999999999999999999997

>KOG0610|consensus

Probab=99.93  E-value=2.4e-25  Score=165.87  Aligned_cols=130  Identities=28%  Similarity=0.444  Sum_probs=116.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +..-.++|.+++.||.|.-|+||+|+.+.++..+|+|++.+......  ..++..|.+|+..                  
T Consensus        72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~------------------  133 (459)
T KOG0610|consen   72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSL------------------  133 (459)
T ss_pred             CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh------------------
Confidence            44445678999999999999999999999999999999987655432  3567788889998                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||.++++|..|+.+.+.|++||||+||+|..+.+++  +.+++..++.|+.+++.||+|||-.|||.|||
T Consensus       134 ------lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDL  205 (459)
T KOG0610|consen  134 ------LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDL  205 (459)
T ss_pred             ------cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccC
Confidence                  99999999999999999999999999999999988765  46999999999999999999999999999997

>KOG0616|consensus

Probab=99.93  E-value=3.9e-25  Score=158.76  Aligned_cols=128  Identities=30%  Similarity=0.595  Sum_probs=116.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||.|+||+|.+++.+.++..+|+|++.+...-.  +.+...+|.++++.                    
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~--------------------  100 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKA--------------------  100 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhh--------------------
Confidence            44568999999999999999999999999999999997654322  22556788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          +.||+++++++.+.+..++|++|||.+||.|+.++++.++++++.++.++.||+.||+|||+++|++|||
T Consensus       101 ----v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDL  170 (355)
T KOG0616|consen  101 ----VSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDL  170 (355)
T ss_pred             ----ccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccC
Confidence                7899999999999999999999999999999999999999999999999999999999999999999997

>KOG0661|consensus

Probab=99.93  E-value=1.1e-26  Score=175.53  Aligned_cols=128  Identities=29%  Similarity=0.525  Sum_probs=110.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+.++|++.++||.|+||.||+|....+++.||||..+++...-..-.-.+|+.-+++                     
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~k---------------------   64 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRK---------------------   64 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHh---------------------
Confidence            35667999999999999999999999999999999987654322111223577777777                     


Q ss_pred             cccCC-CCCceeeEEEEecCC-eEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLT-HPNIVQLIETFEDKH-KVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~-h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++ ||||+++.+.+.+++ .+|+||||| ..+|.++++.+. .|++..++.|+.||++||+|+|.+|+.|||+
T Consensus        65 ---ln~hpniikL~Evi~d~~~~L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDl  136 (538)
T KOG0661|consen   65 ---LNPHPNIIKLKEVIRDNDRILYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL  136 (538)
T ss_pred             ---cCCCCcchhhHHHhhccCceEeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence               77 999999999999887 999999999 559999998654 5999999999999999999999999999997

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.93  E-value=2.8e-24  Score=162.58  Aligned_cols=128  Identities=28%  Similarity=0.575  Sum_probs=114.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+.+|+.++..                    
T Consensus        15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~--------------------   74 (329)
T PTZ00263         15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILME--------------------   74 (329)
T ss_pred             CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh--------------------
Confidence            33568999999999999999999999999999999997653221  22457788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++.+.+.+.+|++|||+++++|.+.+...+.+++..+..++.||+.||+|||++||+||||
T Consensus        75 ----l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  144 (329)
T PTZ00263         75 ----LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDL  144 (329)
T ss_pred             ----CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence                8999999999999999999999999999999999988888999999999999999999999999999997

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.92  E-value=2.3e-24  Score=166.04  Aligned_cols=124  Identities=24%  Similarity=0.464  Sum_probs=111.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+++.||.|+||.||+|.+..+++.+|+|++.......  ....+..|+.++..                        
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~------------------------   57 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE------------------------   57 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh------------------------
Confidence            5889999999999999999999999999999997643222  22456788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.+.+.+.+|++|||+++++|.+++.....+++..++.++.||+.||+|||+.||+||||
T Consensus        58 l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDl  127 (381)
T cd05626          58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDI  127 (381)
T ss_pred             cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.92  E-value=2.7e-24  Score=165.73  Aligned_cols=124  Identities=26%  Similarity=0.498  Sum_probs=111.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +|.+++.||.|+||.||+|.+..+++.+|+|.+......  .....+.+|+.++..                        
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~------------------------   57 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE------------------------   57 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh------------------------
Confidence            689999999999999999999999999999998754321  123456788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.+.+++.+|+|||||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        58 ~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDl  127 (382)
T cd05625          58 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDI  127 (382)
T ss_pred             CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            8999999999999999999999999999999999988778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.7e-24  Score=162.09  Aligned_cols=125  Identities=26%  Similarity=0.473  Sum_probs=112.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.||+|++.......  ....+..|+.++..                       
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-----------------------   57 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999997653222  22456678888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++.+.+.+.+|++|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        58 -~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  127 (333)
T cd05600          58 -TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDL  127 (333)
T ss_pred             -CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence             8899999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.92  E-value=5.6e-24  Score=161.64  Aligned_cols=133  Identities=26%  Similarity=0.423  Sum_probs=115.0

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCC-cEEEEEEEeccccc--ccchhHHHHHHHHHhhccccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENG-TMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ........+.|.+.+.||.|+||.||+|.+..++ ..+|+|.+......  .....+.+|+.++..              
T Consensus        22 ~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--------------   87 (340)
T PTZ00426         22 KRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY--------------   87 (340)
T ss_pred             ccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh--------------
Confidence            3445556678999999999999999999877654 68999998654321  123456778888888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                ++||||+++++++.+.+.+|++|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus        88 ----------l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  157 (340)
T PTZ00426         88 ----------INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDL  157 (340)
T ss_pred             ----------CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCC
Confidence                      8999999999999999999999999999999999988888999999999999999999999999999997

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.3e-24  Score=161.81  Aligned_cols=125  Identities=26%  Similarity=0.512  Sum_probs=112.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+.+|+.+++.                       
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-----------------------   57 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE-----------------------   57 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHh-----------------------
Confidence            36899999999999999999999999999999987543221  22456778888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++.+.+.+.+|++|||+++++|.+++...+.+++..+..++.||+.||+|||++||+||||
T Consensus        58 -l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  127 (291)
T cd05612          58 -VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL  127 (291)
T ss_pred             -CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0597|consensus

Probab=99.92  E-value=2.1e-25  Score=172.03  Aligned_cols=124  Identities=30%  Similarity=0.579  Sum_probs=114.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|+||.||+|+.+.+.+.||+|++.+..... .-..+.+|++++++                        
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~------------------------   57 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRS------------------------   57 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHh------------------------
Confidence            47888999999999999999999999999999998654322 23568899999999                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+.++++|+..+++|+|+|||.| +|+.++...++++++.++.++.+++.||.|||+++|+|||+
T Consensus        58 lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~  126 (808)
T KOG0597|consen   58 LKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDM  126 (808)
T ss_pred             cCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            9999999999999999999999999976 99999999999999999999999999999999999999996

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.92  E-value=7.3e-24  Score=162.11  Aligned_cols=125  Identities=25%  Similarity=0.556  Sum_probs=111.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|+||.||++.+..+++.+|+|++......  .....+..|..++..                       
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE-----------------------   57 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-----------------------
Confidence            3689999999999999999999999999999999754321  122456678888877                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|++|+++++.+.+.+.+|++|||+++++|.+++.....+++..++.++.|++.||+|||++||+||||
T Consensus        58 -l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDL  127 (360)
T cd05627          58 -ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI  127 (360)
T ss_pred             -CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0659|consensus

Probab=99.92  E-value=1.2e-24  Score=154.15  Aligned_cols=124  Identities=30%  Similarity=0.433  Sum_probs=112.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|...+++|.|+||.||+|.+..+++.||||.|...+..+ -.....+|+..++.                        
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqe------------------------   57 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQE------------------------   57 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHH------------------------
Confidence            57889999999999999999999999999999998765443 34678899999999                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|+||+.+.+.|.....+.+|+||++ .+|...++.+. .++..++..|+.+++.|++|||++.|+||||
T Consensus        58 l~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDl  127 (318)
T KOG0659|consen   58 LKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDL  127 (318)
T ss_pred             ccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence            899999999999999999999999995 59999887654 5899999999999999999999999999997

>KOG0198|consensus

Probab=99.92  E-value=2.3e-24  Score=159.62  Aligned_cols=125  Identities=33%  Similarity=0.510  Sum_probs=110.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|...+.||+|+||.||++...++++.+|||.+...... ..+.+.+|+.++.+                        
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~-~~~~l~~Ei~iL~~------------------------   70 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP-TSESLEREIRILSR------------------------   70 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccch-hHHHHHHHHHHHHh------------------------
Confidence            44688999999999999999999999999999998654211 14568999999999                        


Q ss_pred             CCCCCceeeEEEEecCC--eEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++......  .+++.|||+++|+|.+++...+ .+++..++.++.||+.||.|||++||||+||
T Consensus        71 l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~Di  143 (313)
T KOG0198|consen   71 LNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDI  143 (313)
T ss_pred             CCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCc
Confidence            88999999999744443  6999999999999999999877 7999999999999999999999999999997

>KOG0585|consensus

Probab=99.92  E-value=1.9e-24  Score=163.64  Aligned_cols=132  Identities=30%  Similarity=0.559  Sum_probs=111.2

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------------chhHHHHHHHHHhhccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------------EDSLENEIKVLRRFSQS   87 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------------~~~~~~e~~~~~~~~~~   87 (177)
                      ...+....++|.+.+.||+|.||.|.+|++..+++.||||++++......             .+...+|+.++++    
T Consensus        89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk----  164 (576)
T KOG0585|consen   89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK----  164 (576)
T ss_pred             CcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh----
Confidence            34444556689999999999999999999999999999999987644321             1467889999999    


Q ss_pred             ccccccccccCCCcccccccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHHHH
Q psy13106         88 VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLEAV  164 (177)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l  164 (177)
                                          +.|+||+++++...++  +++|||+|||..|.+.. .....+ +.+.+++.|+++++.||
T Consensus       165 --------------------l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GL  223 (576)
T KOG0585|consen  165 --------------------LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGL  223 (576)
T ss_pred             --------------------cCCcCeeEEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHH
Confidence                                9999999999999866  57999999998776643 233344 89999999999999999


Q ss_pred             HHHHhCCccccCC
Q psy13106        165 DYMHEARYLSKPR  177 (177)
Q Consensus       165 ~~LH~~giiH~Dl  177 (177)
                      +|||.+|||||||
T Consensus       224 EYLH~QgiiHRDI  236 (576)
T KOG0585|consen  224 EYLHYQGIIHRDI  236 (576)
T ss_pred             HHHHhcCeecccc
Confidence            9999999999997

>KOG0580|consensus

Probab=99.92  E-value=4.6e-25  Score=154.14  Aligned_cols=130  Identities=28%  Similarity=0.487  Sum_probs=116.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .....+.|.+++.||.|-||.||+|+.+++.-.+|+|++-++.....  ..++.+|+++...                  
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~------------------   78 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSH------------------   78 (281)
T ss_pred             cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecc------------------
Confidence            44566789999999999999999999999999999999977654332  3567778877777                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV--EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            +.||||+++|++|-+...+|+++||...|+++..+.  ...++++..+..++.|++.||.|+|..+||||||
T Consensus        79 ------L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdi  150 (281)
T KOG0580|consen   79 ------LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDI  150 (281)
T ss_pred             ------cCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCC
Confidence                  999999999999999999999999999999999998  5556999999999999999999999999999997

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=8.6e-24  Score=160.91  Aligned_cols=125  Identities=27%  Similarity=0.570  Sum_probs=112.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+..|..++..                       
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-----------------------   57 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999997653322  22456778888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+.+.+.+|+||||+++++|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        58 -~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dl  127 (350)
T cd05573          58 -ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDI  127 (350)
T ss_pred             -cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence             8899999999999999999999999999999999988878999999999999999999999999999997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.8e-23  Score=158.35  Aligned_cols=125  Identities=25%  Similarity=0.483  Sum_probs=109.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||++....+++.+|+|++.+.....  ....+..|..++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-----------------------   57 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-----------------------
Confidence            46999999999999999999999999999999987532211  22446677777777                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+.+++.+.+++++|++|||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||
T Consensus        58 -~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (331)
T cd05597          58 -GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDI  128 (331)
T ss_pred             -CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCC
Confidence             8899999999999999999999999999999999876 346999999999999999999999999999997

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0192|consensus

Probab=99.91  E-value=7.1e-24  Score=160.83  Aligned_cols=128  Identities=24%  Similarity=0.389  Sum_probs=109.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ........+.+.+|.|+||+||++.+..+. .+|||.+........ ...+.+|+.++.+                    
T Consensus        37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~--------------------   95 (362)
T KOG0192|consen   37 EIDPDELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSR--------------------   95 (362)
T ss_pred             ecChHHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHh--------------------
Confidence            333445667777999999999999998432 299999976543322 3578899999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCC-eEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKH-KVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEAR-YLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~g-iiH~Dl  177 (177)
                          ++||||++++++..++. .+++||||+++|+|.+++..  ...++...+..++.||+.||.|||+++ ||||||
T Consensus        96 ----l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDL  169 (362)
T KOG0192|consen   96 ----LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDL  169 (362)
T ss_pred             ----CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeeccc
Confidence                89999999999998877 79999999999999999987  567999999999999999999999999 999997

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=3.4e-23  Score=153.91  Aligned_cols=124  Identities=23%  Similarity=0.385  Sum_probs=109.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.+|+|.+...........+.+|+.+++.                        +
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------------l   60 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN------------------------L   60 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh------------------------C
Confidence            4799999999999999999999999999999998654433334566789998888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+.+..+++||++++ +|.+++...+ .+++..+..++.||+.||+|||++||+||||
T Consensus        61 ~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  129 (288)
T cd07871          61 KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDL  129 (288)
T ss_pred             CCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            999999999999999999999999965 8998886554 4789999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.91  E-value=1.9e-23  Score=157.65  Aligned_cols=119  Identities=27%  Similarity=0.511  Sum_probs=105.6

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||+|+||.||+|.+..+++.+|+|++.......  .......|+.++..                        ++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~hp~   56 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN------------------------TRHPF   56 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh------------------------CCCCC
Confidence            36899999999999999999999999997543211  22445678888877                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++.+..++.+|++|||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        57 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl  121 (323)
T cd05571          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL  121 (323)
T ss_pred             CCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            99999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=3.4e-23  Score=156.84  Aligned_cols=125  Identities=24%  Similarity=0.450  Sum_probs=109.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||+|+||.||++.+..+++.+|+|++.......  ....+..|..++..                       
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-----------------------   57 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHh-----------------------
Confidence            47999999999999999999999999999999986533211  12345667777766                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|++|+.+++.+.+.+..|++|||+++|+|.+++.. ...+++..+..++.|++.||+|||++||+||||
T Consensus        58 -~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDl  128 (331)
T cd05624          58 -GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDI  128 (331)
T ss_pred             -CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence             7899999999999999999999999999999999976 456899999999999999999999999999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.91  E-value=2.8e-23  Score=159.45  Aligned_cols=128  Identities=26%  Similarity=0.433  Sum_probs=111.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||++.+..+++.+|+|++.+.....  ....+..|+.++..                   
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-------------------   99 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-------------------   99 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-------------------
Confidence            344578999999999999999999999999999999987533221  12345677777777                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++.+.++..+|+|||||++++|.+++... .+++..+..++.||+.||+|||++||+||||
T Consensus       100 -----~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDL  168 (370)
T cd05621         100 -----ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDV  168 (370)
T ss_pred             -----CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence                 89999999999999999999999999999999988654 5899999999999999999999999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0593|consensus

Probab=99.91  E-value=8.1e-25  Score=157.75  Aligned_cols=124  Identities=23%  Similarity=0.374  Sum_probs=106.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-hhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.|..+.++|.|+||.|++|+++.||+.||||.+..+...... .-..+|++++++                        
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKq------------------------   57 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQ------------------------   57 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHh------------------------
Confidence            4688889999999999999999999999999998655433332 446899999999                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|+|++.+.+.|.....+++|+|||+.. +.+-+... ..++.+.+..+++|++.|+.|||++++|||||
T Consensus        58 LkH~NLVnLiEVFrrkrklhLVFE~~dhT-vL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDI  127 (396)
T KOG0593|consen   58 LKHENLVNLIEVFRRKRKLHLVFEYCDHT-VLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDI  127 (396)
T ss_pred             cccchHHHHHHHHHhcceeEEEeeecchH-HHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccC
Confidence            89999999999999999999999999774 44444433 33999999999999999999999999999997

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.91  E-value=3.1e-23  Score=159.27  Aligned_cols=129  Identities=25%  Similarity=0.405  Sum_probs=111.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .....+.|.+.+.||.|+||.||++.+..+++.+|+|.+.......  ....+..|+.++..                  
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~------------------   99 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH------------------   99 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh------------------
Confidence            3445668999999999999999999999999999999997543211  22345678888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+++.+|++|||+++|+|.+++... .+++..+..++.||+.||+|||++||+||||
T Consensus       100 ------~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (370)
T cd05596         100 ------ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (370)
T ss_pred             ------CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                  89999999999999999999999999999999988654 5899999999999999999999999999997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.91  E-value=4.6e-23  Score=154.14  Aligned_cols=125  Identities=26%  Similarity=0.437  Sum_probs=109.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.+|+|++.............+|+.+++.                        
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~------------------------   59 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKG------------------------   59 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhh------------------------
Confidence            46799999999999999999999999999999998755433333456788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+....+++|||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||
T Consensus        60 l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  129 (303)
T cd07869          60 LKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDL  129 (303)
T ss_pred             CCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            899999999999999999999999995 5888877654 45899999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.91  E-value=3.9e-23  Score=156.28  Aligned_cols=125  Identities=28%  Similarity=0.516  Sum_probs=110.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|+||.||++.+..+++.+|+|.+.......  ....+..|+.++..                       
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-----------------------   57 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI-----------------------   57 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999997654311  22446677777777                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+.+.+.+|++|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||
T Consensus        58 -~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dl  128 (330)
T cd05601          58 -SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDI  128 (330)
T ss_pred             -CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccC
Confidence             88999999999999999999999999999999999876 57999999999999999999999999999997

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0594|consensus

Probab=99.91  E-value=1.7e-23  Score=153.43  Aligned_cols=125  Identities=27%  Similarity=0.410  Sum_probs=110.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ...|..+++||.|+||.||+|+.+.+++.||+|.+..... ++......+|+.+++.                       
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~-----------------------   66 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKR-----------------------   66 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHH-----------------------
Confidence            4468888899999999999999999999999999987654 4455677899999999                       


Q ss_pred             cCCCCC-ceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        107 RLTHPN-IVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKG----SYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       107 ~~~h~~-i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                       ++|+| |+.+++.+.+.+      .+++++||+ ..+|.+++...+    .++...++.++.||+.||+|||++||+||
T Consensus        67 -L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHR  144 (323)
T KOG0594|consen   67 -LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHR  144 (323)
T ss_pred             -hCCCcceEEEEeeeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence             88999 999999998766      899999999 569999997655    47889999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       145 DL  146 (323)
T KOG0594|consen  145 DL  146 (323)
T ss_pred             cC
Confidence            97

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.91  E-value=4.1e-23  Score=158.63  Aligned_cols=132  Identities=25%  Similarity=0.410  Sum_probs=113.1

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ........+.|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+..|..++..               
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~---------------   99 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF---------------   99 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh---------------
Confidence            3344555679999999999999999999999999999999986533211  12345667777777               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++||||+++++.+.+++.+|++|||+++++|.+++... .+++..+..++.||+.||+|||++||+||||
T Consensus       100 ---------~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL  168 (371)
T cd05622         100 ---------ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDV  168 (371)
T ss_pred             ---------CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence                     89999999999999999999999999999999988654 4899999999999999999999999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=4.4e-23  Score=154.97  Aligned_cols=117  Identities=26%  Similarity=0.483  Sum_probs=104.3

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||.||+|.+..+++.+|+|.+.......  ....+..|+.++..                        ++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~------------------------l~h~~iv   56 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQ------------------------VNCPFIV   56 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh------------------------CCCCcEe
Confidence            689999999999999999999999987543211  22456678888887                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+.+.+.+|++|||+++++|.+++...+++++..+..++.||+.||.|||++||+||||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl  119 (312)
T cd05585          57 PLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL  119 (312)
T ss_pred             ceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.90  E-value=4.6e-23  Score=155.60  Aligned_cols=119  Identities=28%  Similarity=0.517  Sum_probs=105.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||++.+..++..||+|++.......  ....+..|+.+++.                        ++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~hp~   56 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN------------------------TRHPF   56 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh------------------------CCCCC
Confidence            36899999999999999999999999997543221  22345677888877                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++.+..+..+|+||||+++++|..++.....+++..++.++.||+.||.|||++||+||||
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  121 (323)
T cd05595          57 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  121 (323)
T ss_pred             CcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            99999999999999999999999999999888778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0694|consensus

Probab=99.90  E-value=2.2e-23  Score=163.54  Aligned_cols=129  Identities=26%  Similarity=0.522  Sum_probs=112.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....+.|.+.+.||+|.||+|+++..+.+++.+|||++++...-.  .......|-+|+...+                 
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----------------  426 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----------------  426 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----------------
Confidence            445668999999999999999999999999999999998876533  3356777888887632                 


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            +||.++.++.+|+++.++|+||||+.||++... .....+++..++.|+.+|+.||+|||++|||+|||
T Consensus       427 ------~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDl  494 (694)
T KOG0694|consen  427 ------RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDL  494 (694)
T ss_pred             ------cCCeEeecccccccCCeEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeec
Confidence                  599999999999999999999999999995443 34456999999999999999999999999999997

>KOG0194|consensus

Probab=99.90  E-value=3.1e-23  Score=160.31  Aligned_cols=130  Identities=24%  Similarity=0.326  Sum_probs=109.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCc----EEEEEEEeccc--ccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKA--LKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      +....+.-.+.++||.|+||.||+|..+..+.    .||||......  .......+..|.++++.              
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~--------------  217 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQ--------------  217 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHh--------------
Confidence            33444455667899999999999999875422    38999876421  12234677889999998              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                ++||||+++++.......++++||+|+||+|.++++.++. ++..+...++.+.+.||+|||++++||||
T Consensus       218 ----------l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRD  287 (474)
T KOG0194|consen  218 ----------LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRD  287 (474)
T ss_pred             ----------CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchh
Confidence                      8999999999999999999999999999999999998874 99999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       288 I  288 (474)
T KOG0194|consen  288 I  288 (474)
T ss_pred             H
Confidence            7

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=5.4e-23  Score=151.11  Aligned_cols=126  Identities=18%  Similarity=0.295  Sum_probs=108.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...|++.+.||.|+||.||+|.+.   ..+..+|+|.+...........+.+|+.++..                     
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~---------------------   62 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ---------------------   62 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhc---------------------
Confidence            457999999999999999999875   34678999998654322233456778888877                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++.+..++.++++|||+++++|.+++... ..+++..++.++.|++.||+|||++|++||||
T Consensus        63 ---l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~di  133 (266)
T cd05064          63 ---FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGL  133 (266)
T ss_pred             ---CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence               88999999999999999999999999999999988764 46899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=6.4e-23  Score=155.19  Aligned_cols=120  Identities=23%  Similarity=0.488  Sum_probs=104.7

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||++.+..+++.+|+|++........  ...+..|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~-----------------------~~hp~   57 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETA-----------------------SNHPF   57 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc-----------------------cCCCC
Confidence            468999999999999999999999999976432221  23456777777762                       27999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+.+.+|++|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        58 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  122 (329)
T cd05588          58 LVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDL  122 (329)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            99999999999999999999999999999888788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0663|consensus

Probab=99.90  E-value=9.7e-24  Score=153.90  Aligned_cols=131  Identities=22%  Similarity=0.335  Sum_probs=111.8

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ..+....+.|..+..|+.|+||.||+|+++++++.||+|.++-... .+-.-...+|+.++.+                 
T Consensus        69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~-----------------  131 (419)
T KOG0663|consen   69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLK-----------------  131 (419)
T ss_pred             ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHh-----------------
Confidence            4444556679999999999999999999999999999999864432 2223456899999999                 


Q ss_pred             cccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             .+||||+.+-.....  -+.+|+|||||+. +|..++..- .+|...+++.++.|++.|++|||+++|+||||
T Consensus       132 -------~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDL  203 (419)
T KOG0663|consen  132 -------ARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDL  203 (419)
T ss_pred             -------cCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEeccc
Confidence                   899999999998874  3679999999976 888888654 47999999999999999999999999999997

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.90  E-value=7.1e-23  Score=154.59  Aligned_cols=125  Identities=27%  Similarity=0.488  Sum_probs=106.4

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      |.+.+.||.|+||.||++.+..+++.+|||++......  .....+..|.+++.....                     +
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~---------------------l   59 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS---------------------E   59 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc---------------------c
Confidence            67899999999999999999999999999999754321  122455666666554322                     7


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++...+.+|+||||+++++|...+.. ..+++..+..++.||+.||+|||++||+||||
T Consensus        60 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdl  127 (324)
T cd05589          60 RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDL  127 (324)
T ss_pred             CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence            899999999999999999999999999999888755 45999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.90  E-value=6.7e-23  Score=155.04  Aligned_cols=119  Identities=29%  Similarity=0.551  Sum_probs=105.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||++.+..+++.+|+|++.......  ....+.+|+.+++.                        ++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~hp~   56 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN------------------------TRHPF   56 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh------------------------CCCCC
Confidence            36899999999999999999999999997543221  22455677888877                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++.+.+...+.+|+||||+++++|.+.+.....+++..++.++.||+.||+|||++||+||||
T Consensus        57 iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  121 (328)
T cd05593          57 LTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL  121 (328)
T ss_pred             CcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence            99999999999999999999999999999888778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.90  E-value=1e-22  Score=153.72  Aligned_cols=124  Identities=26%  Similarity=0.465  Sum_probs=106.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||.|+||.||+|.+..+++.+|+|++.+....  .....+..|..++..                        
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~------------------------   56 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLAL------------------------   56 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh------------------------
Confidence            488999999999999999999999999999999754321  122445667777766                        


Q ss_pred             CCC-CCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTH-PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.| ++|+.+++++.+.+.+|++|||+++++|.+++.....+++..+..++.||+.||+|||++||+||||
T Consensus        57 ~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl  127 (324)
T cd05587          57 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL  127 (324)
T ss_pred             cCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            555 5688899999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0586|consensus

Probab=99.90  E-value=5.2e-23  Score=159.70  Aligned_cols=130  Identities=37%  Similarity=0.649  Sum_probs=118.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-hhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...-..-|.+.+.||.|.|+.|.++.+.-++..||||+|.+...+... ....+|+++++.                   
T Consensus        51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~-------------------  111 (596)
T KOG0586|consen   51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKS-------------------  111 (596)
T ss_pred             ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHh-------------------
Confidence            334455799999999999999999999999999999999877654433 457899999999                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||++++...+....+|+||||+-+|.+++++..++.+.+..++.++.|++.+++|||+++||||||
T Consensus       112 -----l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdL  181 (596)
T KOG0586|consen  112 -----LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDL  181 (596)
T ss_pred             -----cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceecccc
Confidence                 9999999999999999999999999999999999999999999999999999999999999999999997

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.90  E-value=1.5e-22  Score=153.31  Aligned_cols=126  Identities=21%  Similarity=0.316  Sum_probs=113.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||++.+..++..+|+|.+...........+.+|+.++..                        
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~------------------------   59 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE------------------------   59 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH------------------------
Confidence            56899999999999999999999999999999998654322233567889999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                      ++||||+++++++...+.++++|||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||
T Consensus        60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dl  130 (331)
T cd06649          60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV  130 (331)
T ss_pred             CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCC
Confidence            899999999999999999999999999999999998877899999999999999999999986 6999997

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.90  E-value=1.6e-22  Score=153.21  Aligned_cols=125  Identities=26%  Similarity=0.476  Sum_probs=108.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|+||.||++....+++.+|+|++.+.....  ....+..|..++..                       
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-----------------------   57 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhh-----------------------
Confidence            46999999999999999999999999999999986533211  12335667777766                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|++|+.+++.+.+.+.+|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++||+||||
T Consensus        58 -~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDl  128 (332)
T cd05623          58 -GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDI  128 (332)
T ss_pred             -CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence             7899999999999999999999999999999999976 356899999999999999999999999999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.90  E-value=6.4e-23  Score=156.53  Aligned_cols=123  Identities=23%  Similarity=0.380  Sum_probs=106.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|...+.||.|+||.||++.+..+++.||||++...........+.+|+.+++.                       
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-----------------------  128 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD-----------------------  128 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh-----------------------
Confidence            345788999999999999999999999999999998654322233567788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++++..++.++++|||+++++|...    ...++..+..++.||+.||+|||++||+||||
T Consensus       129 -l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  194 (353)
T PLN00034        129 -VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDI  194 (353)
T ss_pred             -CCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence             8999999999999999999999999999988653    23567888899999999999999999999997

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.90  E-value=1.1e-22  Score=154.22  Aligned_cols=127  Identities=20%  Similarity=0.314  Sum_probs=113.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||++.+..++..+++|.+...........+.+|+.+++.                       
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-----------------------   59 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE-----------------------   59 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH-----------------------
Confidence            356899999999999999999999999999999998654322233567889999988                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                       ++|+||+++++++.+++.++++|||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||
T Consensus        60 -l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dl  130 (333)
T cd06650          60 -CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV  130 (333)
T ss_pred             -CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence             899999999999999999999999999999999998878899999999999999999999985 7999997

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.90  E-value=1.9e-22  Score=149.63  Aligned_cols=123  Identities=25%  Similarity=0.431  Sum_probs=107.6

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      |.+.+.||.|+||.||++.+..+++.+|+|.+........  ...+.+|+.++..                        +
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~------------------------l   57 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEK------------------------V   57 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHh------------------------c
Confidence            7889999999999999999999999999999875443222  2346678888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|++++.+.+.+.+++.++++|||+++++|.+.+...  ..+++..+..++.|++.||+|||++||+||||
T Consensus        58 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05631          58 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL  128 (285)
T ss_pred             CCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            9999999999999999999999999999998877543  35899999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.90  E-value=1.4e-22  Score=150.31  Aligned_cols=125  Identities=24%  Similarity=0.356  Sum_probs=107.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.+|+|.+....... ....+.+|+.++..                        
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~------------------------   56 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT------------------------   56 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh------------------------
Confidence            36999999999999999999999999999999986543222 23456788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.+...+.+|++|||++++.+..+......+++..++.++.||+.||.|||+.||+||||
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  126 (287)
T cd07848          57 LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDI  126 (287)
T ss_pred             CCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            8999999999999999999999999988766655444456999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.90  E-value=5.6e-23  Score=155.88  Aligned_cols=128  Identities=22%  Similarity=0.339  Sum_probs=104.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...++|.+.+.||.|+||.||+|.+.     .+++.||+|.+...........+..|+.++..                 
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-----------------   66 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIH-----------------   66 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHH-----------------
Confidence            44568999999999999999999853     34568999998643322233567788888888                 


Q ss_pred             cccccccC-CCCCceeeEEEEecC-CeEEEEEeccCCcchhHHHHhc---------------------------------
Q psy13106        101 NDKDKERL-THPNIVQLIETFEDK-HKVYLVMELVTGGELFDRIVEK---------------------------------  145 (177)
Q Consensus       101 ~~~~~~~~-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~---------------------------------  145 (177)
                             + +||||+++++++... ..++++|||+++|+|.+++...                                 
T Consensus        67 -------l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (338)
T cd05102          67 -------IGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEA  139 (338)
T ss_pred             -------hccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcccccccc
Confidence                   5 799999999987654 4689999999999999988642                                 


Q ss_pred             -----------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        146 -----------------------------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       146 -----------------------------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                   .+++...+..++.||+.||.|||++||+||||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  200 (338)
T cd05102         140 GQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDL  200 (338)
T ss_pred             ccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCC
Confidence                                         23677888999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.3e-22  Score=149.22  Aligned_cols=124  Identities=27%  Similarity=0.446  Sum_probs=107.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|++.+.||.|+||.||++.+..+++.+|+|.+........  ...+.+|+.+++.                        
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~------------------------   56 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK------------------------   56 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHh------------------------
Confidence            48899999999999999999998999999999865433222  2345678888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.+.+++.++++|||+++++|.+.+...  ..+++..+..++.|++.||.|||+.||+||||
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (285)
T cd05605          57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDL  128 (285)
T ss_pred             cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence            89999999999999999999999999999999887643  35899999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0197|consensus

Probab=99.90  E-value=2.3e-23  Score=159.29  Aligned_cols=122  Identities=25%  Similarity=0.416  Sum_probs=107.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.+.+++.||+|.||.||+|.+..+ ..+|+|.+....  -..+.+.+|+.++++                        +
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~--m~~~~f~~Ea~iMk~------------------------L  258 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGS--MSPEAFLREAQIMKK------------------------L  258 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccc--cChhHHHHHHHHHHh------------------------C
Confidence            3567788999999999999999843 478999986542  234667799999999                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|++|++++++......+||||||++.|+|.++++.  ...++......++.||++||+||.++++|||||
T Consensus       259 ~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDL  329 (468)
T KOG0197|consen  259 RHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDL  329 (468)
T ss_pred             cccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhh
Confidence            999999999999988899999999999999999986  445999999999999999999999999999997

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=1.6e-22  Score=152.26  Aligned_cols=119  Identities=29%  Similarity=0.556  Sum_probs=103.9

Q ss_pred             eeecccceeEEEEEEEe---cCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         35 ELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      +.||.|+||.||++++.   .+++.+|+|++....... .......|+.++..                        ++|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~h   57 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAE------------------------VNH   57 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHh------------------------CCC
Confidence            57999999999998863   568999999997543322 22345678888887                        899


Q ss_pred             CCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        111 PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       111 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |||+++++.+.+++.+|++|||+++++|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        58 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  124 (318)
T cd05582          58 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDL  124 (318)
T ss_pred             CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            9999999999999999999999999999999988778999999999999999999999999999997

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.90  E-value=1.8e-22  Score=152.43  Aligned_cols=119  Identities=28%  Similarity=0.521  Sum_probs=104.0

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||+|+||.||++.+..+++.+|+|++.......  .......|..++..                        ++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~------------------------~~hp~   56 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN------------------------SRHPF   56 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh------------------------CCCCC
Confidence            46899999999999999999999999997543221  12345567777776                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      |+++.+.+..+..+|+||||+++++|.+++.....+++..+..++.||+.||.|||+ .||+||||
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDi  122 (325)
T cd05594          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL  122 (325)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence            999999999999999999999999999998887789999999999999999999997 79999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.90  E-value=2.1e-22  Score=150.60  Aligned_cols=127  Identities=24%  Similarity=0.422  Sum_probs=106.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEec----------------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRE----------------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN   90 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~   90 (177)
                      ..++|.+.+.||+|+||.||+|.+..                ++..+|+|.+...........+.+|+.++..       
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-------   75 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSR-------   75 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhh-------
Confidence            34689999999999999999998642                2347999998654322233567788888888       


Q ss_pred             cccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-------------------CCCHH
Q psy13106         91 RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-------------------SYTEK  151 (177)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~  151 (177)
                                       +.||||+++++++.+.+..+++|||+.+++|.+++....                   .++..
T Consensus        76 -----------------l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (304)
T cd05096          76 -----------------LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYS  138 (304)
T ss_pred             -----------------cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHH
Confidence                             899999999999999899999999999999999886432                   25677


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        152 DASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       152 ~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .+..++.||+.||.|||+.||+||||
T Consensus       139 ~~~~i~~~i~~al~~lH~~~ivH~dl  164 (304)
T cd05096         139 SLLHVALQIASGMKYLSSLNFVHRDL  164 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCc
Confidence            88999999999999999999999997

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0607|consensus

Probab=99.89  E-value=3.9e-24  Score=155.48  Aligned_cols=144  Identities=33%  Similarity=0.557  Sum_probs=126.3

Q ss_pred             hhhhccCCCCCcccCcccccceEE-EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccc
Q psy13106         10 AKKLKKDGKDNEIKGPSIEEKYIL-KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV   88 (177)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~y~~-~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~   88 (177)
                      ..+.++.+.........+.+-|.+ .+.||.|+|+.|--|....++.+||||+|.+. ......++.+|++++...    
T Consensus        58 rrk~rk~gr~~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~C----  132 (463)
T KOG0607|consen   58 RRKKRKRGRATSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQC----  132 (463)
T ss_pred             ccccccCCcccccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHh----
Confidence            344455555566666667777876 56799999999999999999999999999876 455667899999999874    


Q ss_pred             cccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         89 HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                         -+|+||++++++|++...+|+|||.+.||.|.+.|..+..|++.++..++.+|+.||.|||
T Consensus       133 -------------------qgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH  193 (463)
T KOG0607|consen  133 -------------------QGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLH  193 (463)
T ss_pred             -------------------cCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHh
Confidence                               3799999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      .+||.||||
T Consensus       194 ~kgIAHRDl  202 (463)
T KOG0607|consen  194 TKGIAHRDL  202 (463)
T ss_pred             hcCcccccC
Confidence            999999997

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.89  E-value=3.4e-22  Score=148.55  Aligned_cols=125  Identities=32%  Similarity=0.607  Sum_probs=111.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|++.+.||.|++|.||++.+..+++.+++|++.......  ....+..|+.+++.                       
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQS-----------------------   57 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999986543221  22456778888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++.+.+.+.++++|||+++++|.+++.....+++..+..++.||+.||.|||+.||+|+||
T Consensus        58 -l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl  127 (290)
T cd05580          58 -IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDL  127 (290)
T ss_pred             -CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence             8899999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0591|consensus

Probab=99.89  E-value=7e-25  Score=156.75  Aligned_cols=130  Identities=28%  Similarity=0.399  Sum_probs=111.2

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      +......|++++.||+|+||+||++.+..++..+|.|.+.-...... .+.+..|+.++++                   
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ-------------------   74 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQ-------------------   74 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHh-------------------
Confidence            45556679999999999999999999999999999999874443322 2567889999999                   


Q ss_pred             cccccCCCCCceeeEE-EEecCCe-EEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--CC--c
Q psy13106        103 KDKERLTHPNIVQLIE-TFEDKHK-VYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHE--AR--Y  172 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~-~~~~~~~-~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~--~g--i  172 (177)
                           ++||||+++++ .|.+++. +++|||+|.+|+|.++++.    ...++++.++.++.|++.||..+|+  .+  |
T Consensus        75 -----L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~V  149 (375)
T KOG0591|consen   75 -----LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTV  149 (375)
T ss_pred             -----cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccce
Confidence                 99999999998 5655555 9999999999999998863    3459999999999999999999999  55  9


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       150 mHRDI  154 (375)
T KOG0591|consen  150 MHRDI  154 (375)
T ss_pred             eeccC
Confidence            99997

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=2.8e-22  Score=154.94  Aligned_cols=119  Identities=22%  Similarity=0.299  Sum_probs=107.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ...+|.+.+.||.|+||.||+|.+..+++.+|+|...       ...+.+|+.+++.                       
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~-----------------------  139 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRA-----------------------  139 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHh-----------------------
Confidence            3457999999999999999999999999999999642       2345789999988                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++..+...+++||++ +++|..++.....+++..++.++.||+.||+|||++||+||||
T Consensus       140 -l~HpnIv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi  208 (391)
T PHA03212        140 -INHPSIIQLKGTFTYNKFTCLILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDI  208 (391)
T ss_pred             -CCCCCCCCEeEEEEECCeeEEEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence             89999999999999999999999999 4689998887778999999999999999999999999999997

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.89  E-value=2.1e-22  Score=151.60  Aligned_cols=120  Identities=27%  Similarity=0.501  Sum_probs=101.8

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|.+..+++.||+|++......  ........|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------~~hp~   57 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----------------------WEHPF   57 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----------------------cCCCC
Confidence            3689999999999999999999999999754321  1123334455554431                       47999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++.+..+..+|++|||+++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl  122 (316)
T cd05592          58 LTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL  122 (316)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            99999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.89  E-value=3.1e-22  Score=151.14  Aligned_cols=125  Identities=26%  Similarity=0.443  Sum_probs=106.5

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||.|+||.||+|.+..+++.||+|++.......  .......|..++...                       
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------   57 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQ-----------------------   57 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc-----------------------
Confidence            3778899999999999999999999999999987543211  123455666666651                       


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ..|++++++++++.+.+.+|+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDi  127 (323)
T cd05615          58 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL  127 (323)
T ss_pred             cCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            2467888899999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.89  E-value=2e-22  Score=147.00  Aligned_cols=123  Identities=39%  Similarity=0.659  Sum_probs=109.7

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-hhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |++++.||+|+||+||++....+++.+|+|.+......... .....|+.++..                        +.
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~------------------------l~   56 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRR------------------------LR   56 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHH------------------------HT
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccc------------------------cc
Confidence            78999999999999999999999999999999766433322 223457788887                        78


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+||+++++++.....++++||++++++|.+++.....++...+..++.|++.||.+||++||+|+||
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~di  124 (260)
T PF00069_consen   57 HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDI  124 (260)
T ss_dssp             BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999987778999999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.89  E-value=3e-22  Score=150.15  Aligned_cols=125  Identities=22%  Similarity=0.325  Sum_probs=111.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+.+.||.|+||.||++.+..++..+++|.+...........+.+|+.++..                        +
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~------------------------l   56 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHE------------------------C   56 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHh------------------------C
Confidence            3699999999999999999999999999999998643222223457788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      +||||+++++.+.+++.++++|||+++++|.+++...+.+++..+..++.|++.||.|||+ .+++|+||
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl  126 (308)
T cd06615          57 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDV  126 (308)
T ss_pred             CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCC
Confidence            9999999999999999999999999999999999887889999999999999999999998 69999997

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=3.1e-22  Score=151.56  Aligned_cols=123  Identities=27%  Similarity=0.476  Sum_probs=105.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||+|.+..+++.||||.+...... .....+.+|+.+++.                        +
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~------------------------l   56 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRL------------------------L   56 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHh------------------------C
Confidence            589999999999999999999999999999998643211 122456788888888                        8


Q ss_pred             CCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++...     ..+|++|||| +++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        57 ~hpniv~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  129 (338)
T cd07859          57 RHPDIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDL  129 (338)
T ss_pred             CCCCEeeecceEeccCCCCCceEEEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            999999999887533     3589999999 4689999888778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.89  E-value=4e-22  Score=150.88  Aligned_cols=124  Identities=25%  Similarity=0.519  Sum_probs=107.2

Q ss_pred             ceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEecccccc---cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKG---KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .|.+.+.||.|+||.||+++..   .+++.+|+|++.......   .......|..++..                    
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~--------------------   60 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH--------------------   60 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHh--------------------
Confidence            4889999999999999998864   468899999987543211   12345677777777                    


Q ss_pred             ccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          + +|++|+++++++...+.++++|||+++++|.+++.....+++..+..++.||+.||+|||++||+||||
T Consensus        61 ----l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDl  131 (332)
T cd05614          61 ----VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDI  131 (332)
T ss_pred             ----ccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence                5 599999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.89  E-value=2.7e-22  Score=151.83  Aligned_cols=120  Identities=23%  Similarity=0.481  Sum_probs=104.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||+|+||.||++.+..+++.+|+|++.+......  ...+..|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~-----------------------~~hp~   57 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA-----------------------SNHPF   57 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhc-----------------------CCCCc
Confidence            468999999999999999999999999976532221  23456677666652                       47999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+.+.+|++|||+++++|..++.....+++..++.++.||+.||.|||++||+||||
T Consensus        58 iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Di  122 (329)
T cd05618          58 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL  122 (329)
T ss_pred             CCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence            99999999999999999999999999998888788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=1.3e-22  Score=156.05  Aligned_cols=129  Identities=22%  Similarity=0.320  Sum_probs=107.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEE-----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAES-----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....++|.+.+.||.|+||.||+|.+     ..++..+|+|++...........+.+|+.++..                
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~----------------   94 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY----------------   94 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHH----------------
Confidence            33455799999999999999999975     345678999998644322333567789988888                


Q ss_pred             CcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--------------------------------
Q psy13106        100 SNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--------------------------------  146 (177)
Q Consensus       100 ~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------------  146 (177)
                              + +||||+++++++.+....+++||||++|+|.+++....                                
T Consensus        95 --------l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  166 (375)
T cd05104          95 --------LGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLN  166 (375)
T ss_pred             --------hcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhh
Confidence                    6 79999999999999999999999999999999886421                                


Q ss_pred             -------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        147 -------------------------------------------SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       147 -------------------------------------------~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                                 .++...+..++.||+.||.|||++||+||||
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  240 (375)
T cd05104         167 EYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDL  240 (375)
T ss_pred             hhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                                                       3677888999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0589|consensus

Probab=99.89  E-value=2.4e-23  Score=158.40  Aligned_cols=126  Identities=30%  Similarity=0.521  Sum_probs=111.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .+.|.+++++|+|+||.+++++++..+..+++|.|........ ......|+.++++                       
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~-----------------------   59 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK-----------------------   59 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh-----------------------
Confidence            3579999999999999999999999999999999976543322 2456788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCe-EEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHK-VYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       +.||||+.+.+.|.+++. ++|+|+||+||++.+.+.+..  .++++.+..|+.|++.|+.|||+++|+||||
T Consensus        60 -~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDl  132 (426)
T KOG0589|consen   60 -LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDL  132 (426)
T ss_pred             -ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccc
Confidence             899999999999998877 999999999999999997554  4999999999999999999999999999997

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.89  E-value=2.7e-22  Score=150.96  Aligned_cols=120  Identities=28%  Similarity=0.494  Sum_probs=103.2

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|.+..+++.+|+|.+......  ........|..++...                       .+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------~~~~~   57 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA-----------------------WENPF   57 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----------------------cCCCC
Confidence            4689999999999999999999999999764321  1223445566665541                       58999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++.+.+.+.+|++|||+.+++|.+++.....+++..+..++.|++.||+|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDl  122 (316)
T cd05620          58 LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL  122 (316)
T ss_pred             ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            99999999999999999999999999999988778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.89  E-value=2.8e-22  Score=151.16  Aligned_cols=120  Identities=26%  Similarity=0.466  Sum_probs=103.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|.+..+++.+|+|++.......  .......|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-----------------------~~hp~   57 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALA-----------------------AKHPF   57 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhc-----------------------cCCCC
Confidence            36899999999999999999999999987543211  123455666666641                       47999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+++.+|+||||+++++|...+.....+++..+..++.||+.||.|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDi  122 (321)
T cd05591          58 LTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL  122 (321)
T ss_pred             ccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            99999999999999999999999999999988788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.89  E-value=5e-22  Score=149.91  Aligned_cols=125  Identities=26%  Similarity=0.443  Sum_probs=106.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||+|+||.||+|.+..+++.+|+|++.+......  ......|..++...                       
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------   57 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALS-----------------------   57 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc-----------------------
Confidence            48899999999999999999999999999999975432211  12344555555541                       


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ..|++++.+++++.+.+.+|+||||+++++|.+++.....+++..+..++.||+.||+|||++||+||||
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  127 (323)
T cd05616          58 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL  127 (323)
T ss_pred             cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCC
Confidence            3689999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=4.3e-22  Score=162.88  Aligned_cols=126  Identities=28%  Similarity=0.472  Sum_probs=111.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.|.+.+.||.|+||.||+|.+..+++.||||++........  ...+..|+.++..                      
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~----------------------   60 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALAL----------------------   60 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHh----------------------
Confidence            3579999999999999999999999999999999865432211  2456677777777                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+||++++..+.....+|+||||+.+++|.+++...+.+++..++.++.||+.||.|||++|||||||
T Consensus        61 --l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDL  130 (669)
T cd05610          61 --SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDL  130 (669)
T ss_pred             --cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCc
Confidence              8999999999999999999999999999999999987777999999999999999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.89  E-value=3.6e-22  Score=150.34  Aligned_cols=120  Identities=25%  Similarity=0.457  Sum_probs=102.8

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|.+..+++.+|+|.+.....  .........|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------~~hp~   57 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----------------------WEHPF   57 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----------------------cCCCc
Confidence            468999999999999999999999999976532  11223445566555541                       58999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+++.+|++|||+++++|.+++.....+++..+..++.|++.||.|||++||+||||
T Consensus        58 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi  122 (316)
T cd05619          58 LTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL  122 (316)
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence            99999999999999999999999999999988777999999999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.89  E-value=3e-22  Score=151.02  Aligned_cols=120  Identities=27%  Similarity=0.513  Sum_probs=103.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||+|+||.||+|.++.+++.+|+|++......  ........|..++...                       .+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------~~h~~   57 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA-----------------------RNHPF   57 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-----------------------cCCCc
Confidence            3689999999999999999999999998754321  1223445666666551                       37999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+.+.+|++|||+++++|.+++.....+++..+..++.|++.||+|||++||+||||
T Consensus        58 iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dl  122 (320)
T cd05590          58 LTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL  122 (320)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            99999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=7e-22  Score=148.15  Aligned_cols=125  Identities=25%  Similarity=0.386  Sum_probs=108.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.+|+|.+.............+|+.++..                        
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------------   60 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKD------------------------   60 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHh------------------------
Confidence            35799999999999999999999999999999998755433334456778888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++++..++..+++|||+++ +|.+++...+ .++...+..++.||+.||+|||++||+||||
T Consensus        61 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dl  130 (309)
T cd07872          61 LKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDL  130 (309)
T ss_pred             CCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            8999999999999999999999999965 8888776543 4889999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.89  E-value=3.5e-22  Score=150.76  Aligned_cols=119  Identities=30%  Similarity=0.598  Sum_probs=101.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHH-HHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIK-VLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+..+++.+|+|++........  ...+..|.. +++.                        ++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~------------------------l~hp   56 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKN------------------------VKHP   56 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhh------------------------CCCC
Confidence            468999999999999999999999999975432211  123334433 2344                        7899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+..++.+|++|||+++++|..++.....+++..+..++.||+.||+|||++||+||||
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di  122 (323)
T cd05575          57 FLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL  122 (323)
T ss_pred             CCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.89  E-value=4.5e-22  Score=150.43  Aligned_cols=120  Identities=23%  Similarity=0.481  Sum_probs=104.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|....+++.+|+|++.......  ....+..|..++...                       ..|++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~-----------------------~~~~~   57 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQA-----------------------SSNPF   57 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhh-----------------------cCCCC
Confidence            46999999999999999999999999997643222  123456777777662                       36999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+.+++++.+.+.+|++|||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl  122 (327)
T cd05617          58 LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDL  122 (327)
T ss_pred             EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            99999999999999999999999999999887778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.89  E-value=5.7e-22  Score=145.51  Aligned_cols=126  Identities=25%  Similarity=0.416  Sum_probs=111.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|.+.+.||+|+||.||+|.+..+++.+++|++..... .....+.+|+.++..                       
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~-----------------------   62 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKE-----------------------   62 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHh-----------------------
Confidence            34579999999999999999999999999999999864321 222456678888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++++.+...+.+|++|||+++++|.+++...+.+++..+..++.|++.||+|||+.||+||||
T Consensus        63 -~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  132 (267)
T cd06646          63 -CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDI  132 (267)
T ss_pred             -cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence             8999999999999999999999999999999999887778999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.89  E-value=3.7e-22  Score=150.44  Aligned_cols=119  Identities=29%  Similarity=0.597  Sum_probs=101.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHH-HHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIK-VLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+..+++.+|+|++.......  ....+..|.. +++.                        ++||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------------------------~~h~   56 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN------------------------LKHP   56 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh------------------------CCCC
Confidence            46899999999999999999999999997543221  1223444443 3444                        7899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+.+.+.+|++|||+++++|...+.....+++..+..++.||+.||.|||++||+||||
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl  122 (321)
T cd05603          57 FLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL  122 (321)
T ss_pred             CccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            999999999999999999999999999998887778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.89  E-value=4.6e-22  Score=149.86  Aligned_cols=120  Identities=28%  Similarity=0.517  Sum_probs=103.9

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||++.+..+++.+|+|++.+.....  .......|..++...                       .+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-----------------------~~h~~   57 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALA-----------------------GKHPF   57 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhc-----------------------cCCCC
Confidence            46899999999999999999999999997653221  224455677777652                       26999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++.+.+.+|++|||+++++|..++.....+++..+..++.||+.||.|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  122 (318)
T cd05570          58 LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDL  122 (318)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCC
Confidence            99999999999999999999999999999988878999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=4.8e-22  Score=150.05  Aligned_cols=119  Identities=27%  Similarity=0.544  Sum_probs=103.9

Q ss_pred             eeecccceeEEEEEEEe---cCCcEEEEEEEecccccc---cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         35 ELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKG---KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.||.|+||.||++...   .+++.+|+|++.......   ....+..|+.+++.                        +
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~------------------------l   57 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEA------------------------V   57 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHh------------------------C
Confidence            67999999999999874   468899999987543211   12345678888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++.+..++.+|++|||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus        58 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  126 (323)
T cd05584          58 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDL  126 (323)
T ss_pred             CCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            999999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.89  E-value=4.6e-22  Score=150.25  Aligned_cols=119  Identities=29%  Similarity=0.580  Sum_probs=101.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHH-HHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKV-LRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+..+++.+|+|++.......  ....+..|..+ ++.                        ++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------------------------~~hp   56 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKN------------------------VKHP   56 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHh------------------------CCCC
Confidence            36899999999999999999999999987543211  11233444433 344                        7899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+..++.+|++|||+.+++|..++.....+++..+..++.||+.||+|||++||+||||
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl  122 (325)
T cd05604          57 FLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL  122 (325)
T ss_pred             CCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            999999999999999999999999999999888888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.89  E-value=4.7e-22  Score=150.16  Aligned_cols=119  Identities=29%  Similarity=0.568  Sum_probs=100.6

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHH-HHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIK-VLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+..+++.+|+|++........  ...+..|.. +++.                        ++|+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------------------------~~h~   56 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKN------------------------VKHP   56 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHh------------------------CCCC
Confidence            368999999999999999999999999975432111  122333333 2344                        7899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+.+.+.+|++|||+++++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        57 ~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl  122 (325)
T cd05602          57 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL  122 (325)
T ss_pred             CCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.89  E-value=4.5e-22  Score=154.13  Aligned_cols=131  Identities=21%  Similarity=0.337  Sum_probs=107.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ......++|.+++.||.|+||.||+|.+...     ...||||.+...........+.+|+.++..              
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~--------------   96 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTH--------------   96 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh--------------
Confidence            3344466899999999999999999987533     346999998654333334567889998888              


Q ss_pred             CCCcccccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-------------------------------
Q psy13106         98 NNSNDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-------------------------------  145 (177)
Q Consensus        98 ~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------------------------  145 (177)
                                ++ ||||+++++++.+...+|++||||++|+|.+++..+                               
T Consensus        97 ----------l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (400)
T cd05105          97 ----------LGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSY  166 (400)
T ss_pred             ----------cCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccch
Confidence                      64 999999999999999999999999999999887542                               


Q ss_pred             -----------------------------------------------------------------CCCCHHHHHHHHHHH
Q psy13106        146 -----------------------------------------------------------------GSYTEKDASMLIRQV  160 (177)
Q Consensus       146 -----------------------------------------------------------------~~~~~~~~~~~~~qi  160 (177)
                                                                                       ..+++..+..++.||
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi  246 (400)
T cd05105         167 VILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQV  246 (400)
T ss_pred             hhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHH
Confidence                                                                             136777888999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||.|||+.||+||||
T Consensus       247 ~~aL~~LH~~~ivH~di  263 (400)
T cd05105         247 ARGMEFLASKNCVHRDL  263 (400)
T ss_pred             HHHHHHHHhCCeeCCCC
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0578|consensus

Probab=99.89  E-value=4.7e-23  Score=158.67  Aligned_cols=130  Identities=27%  Similarity=0.449  Sum_probs=116.4

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .........|...++||+|+.|.||.+....+++.||||.+..+.. ...+-+.+|+.+++.                  
T Consensus       266 ~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q-~~keLilnEi~Vm~~------------------  326 (550)
T KOG0578|consen  266 VSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ-PKKELLLNEILVMRD------------------  326 (550)
T ss_pred             ccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC-CchhhhHHHHHHHHh------------------
Confidence            3445666789999999999999999999999999999999976652 334668999999999                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ..|+||+.+++.|...+.+|+||||++||+|.+.+... .+++.++..+.++++.||+|||.+||+||||
T Consensus       327 ------~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDI  395 (550)
T KOG0578|consen  327 ------LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDI  395 (550)
T ss_pred             ------ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeecc
Confidence                  88999999999998889999999999999999988654 4999999999999999999999999999997

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.89  E-value=1.3e-21  Score=146.16  Aligned_cols=125  Identities=24%  Similarity=0.383  Sum_probs=109.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.+|+|.+...........+..|+.++..                        
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------------   60 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD------------------------   60 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHh------------------------
Confidence            45799999999999999999999999999999998654433333456778888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++++...+.++++|||+. ++|.+++... ..+++..+..++.||+.||+|||++||+|+||
T Consensus        61 l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dl  130 (301)
T cd07873          61 LKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDL  130 (301)
T ss_pred             cCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            899999999999999999999999996 5888887654 45889999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG4250|consensus

Probab=99.88  E-value=4.4e-23  Score=162.36  Aligned_cols=126  Identities=29%  Similarity=0.433  Sum_probs=109.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ..-|..-+.||.|+||.||+++++.+|+.+|||.++.-......+...+|++++++                        
T Consensus        12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkK------------------------   67 (732)
T KOG4250|consen   12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKK------------------------   67 (732)
T ss_pred             CcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHH------------------------
Confidence            34577788999999999999999999999999998765444455778899999999                        


Q ss_pred             CCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++.-++..      ...++||||.+|+|...+.+-.   .+++.+++.++.++..||.|||++||+||||
T Consensus        68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDl  146 (732)
T KOG4250|consen   68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDL  146 (732)
T ss_pred             cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Confidence            89999999998765433      4689999999999999997422   3999999999999999999999999999997

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.88  E-value=1.6e-21  Score=142.21  Aligned_cols=124  Identities=27%  Similarity=0.447  Sum_probs=109.0

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      +|.+.+.||.|+||.||++.+..+++.+++|.+...........+..|+.+++.                        ++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   56 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAK------------------------MK   56 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHh------------------------CC
Confidence            488999999999999999999999999999998644333334566778888887                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++.+.+.+.+.+|++|||+++++|.+++...  ..+++..+..++.||+.||.|||++||+|+||
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  126 (255)
T cd08219          57 HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDI  126 (255)
T ss_pred             CCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            999999999999999999999999999999988643  34889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.88  E-value=6.8e-22  Score=146.36  Aligned_cols=117  Identities=28%  Similarity=0.496  Sum_probs=101.1

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||+||++.+..+++.+|+|.+........  ...+..|+.+++.                        ++|+||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~------------------------l~~~~i~   56 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAK------------------------VHSRFIV   56 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHh------------------------CCCCcEe
Confidence            6899999999999999999999999865433221  1345678888888                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.+.+.....+|++|||+++++|...+..    +..+++..+..++.||+.||+|||++||+||||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  123 (280)
T cd05608          57 SLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDL  123 (280)
T ss_pred             eeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            999999999999999999999999887642    345899999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=3.4e-22  Score=153.71  Aligned_cols=128  Identities=23%  Similarity=0.321  Sum_probs=107.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...++|.+.+.||.|+||.||+|.+..+     ...||+|.+...........+..|+.+++.                 
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~-----------------   97 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSH-----------------   97 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHh-----------------
Confidence            4456799999999999999999986543     357999998654333333557788888887                 


Q ss_pred             cccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------------------------
Q psy13106        101 NDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------------------------  145 (177)
Q Consensus       101 ~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------------------------  145 (177)
                             + +|+||+++++++...+.++++||||++|+|.+++...                                  
T Consensus        98 -------l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (374)
T cd05106          98 -------LGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSD  170 (374)
T ss_pred             -------hccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccc
Confidence                   6 7999999999999999999999999999999987532                                  


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        146 ------------------------------------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       146 ------------------------------------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                          .+++...+..++.||+.||.|||++||+||||
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDL  238 (374)
T cd05106         171 SGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDV  238 (374)
T ss_pred             ccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence                                                13677889999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0033|consensus

Probab=99.88  E-value=9.5e-25  Score=153.55  Aligned_cols=130  Identities=42%  Similarity=0.675  Sum_probs=115.6

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...+.+.|.+.+.||+|+|+.|++|.+..+++.+++|+|........ .+.+.+|+++-+.                   
T Consensus         6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~-------------------   66 (355)
T KOG0033|consen    6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK-------------------   66 (355)
T ss_pred             ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHh-------------------
Confidence            44567789999999999999999999999999999999986655443 3678888888777                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +.||||+++.+...+..+.|+|+|+++|++|..-+..+.-+++..+..++.||+++|.|||++||||||+
T Consensus        67 -----LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDv  136 (355)
T KOG0033|consen   67 -----LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDL  136 (355)
T ss_pred             -----cCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC
Confidence                 8999999999999999999999999999999776655566899999999999999999999999999996

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.88  E-value=2.2e-21  Score=144.05  Aligned_cols=125  Identities=26%  Similarity=0.393  Sum_probs=109.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|.+.+.||.|++|.||+|.++.+++.|++|.+.............+|+.+++.                        
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~------------------------   59 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKD------------------------   59 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhh------------------------
Confidence            46799999999999999999999989999999998654433333456678888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+++++++.+.+..++||||+.+ +|.+++... ..+++..++.++.|++.||.|||++||+||||
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl  129 (291)
T cd07844          60 LKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDL  129 (291)
T ss_pred             CCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence            8999999999999999999999999964 899888654 35899999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.88  E-value=7.9e-22  Score=144.65  Aligned_cols=124  Identities=26%  Similarity=0.467  Sum_probs=109.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .|+..+.||.|++|.||++.+..+++.+++|.+.......     ....+..|+.+++.                     
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~---------------------   59 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR---------------------   59 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH---------------------
Confidence            4788899999999999999999999999999986433211     12456778888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|++++++.+.+++..+++||++++++|.+++...+++++..+..++.|++.||.|||++|++|+||
T Consensus        60 ---l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i  129 (268)
T cd06630          60 ---LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDV  129 (268)
T ss_pred             ---cCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence               8999999999999999999999999999999999988778999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.88  E-value=6.1e-22  Score=144.64  Aligned_cols=124  Identities=28%  Similarity=0.564  Sum_probs=111.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||.|+||.||+|.+..++..+++|++.......  ....+.+|+.+++.                        
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~------------------------   56 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE------------------------   56 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHh------------------------
Confidence            4899999999999999999999899999999997543222  23567788888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++.+.++..++++|||+.+++|.+++....++++..+..++.||+.||.|||++|++|+||
T Consensus        57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  126 (258)
T cd05578          57 LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDI  126 (258)
T ss_pred             CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            8999999999999999999999999999999999987777999999999999999999999999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=9.8e-22  Score=148.69  Aligned_cols=120  Identities=26%  Similarity=0.471  Sum_probs=99.8

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||.||+|.+..+++.+|+|++.........  .....|..++.....                     -+||+|+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---------------------~~~p~i~   59 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL---------------------DESPFIV   59 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc---------------------CCCCcCc
Confidence            69999999999999999999999998654322111  223344444443110                     1799999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .++..+.+++.+|++|||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        60 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDl  122 (330)
T cd05586          60 GLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL  122 (330)
T ss_pred             ceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=6.2e-22  Score=145.31  Aligned_cols=126  Identities=23%  Similarity=0.429  Sum_probs=111.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|.+.+.||.|+||.||+|.+..+++.+++|.+..... .....+.+|+.++..                       
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~-----------------------   62 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKD-----------------------   62 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHh-----------------------
Confidence            34589999999999999999999999999999999864421 222345667777777                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++++.+...+.+|++|||+++++|.+++...+.+++..+..++.|++.||.|||++|++|+||
T Consensus        63 -l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  132 (267)
T cd06645          63 -CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDI  132 (267)
T ss_pred             -CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.88  E-value=2.5e-21  Score=143.69  Aligned_cols=124  Identities=26%  Similarity=0.444  Sum_probs=107.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|+..+.||.|+||.||++.+..+++.+|+|.+........  ...+..|+.+++.                        
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~------------------------   56 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEK------------------------   56 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHH------------------------
Confidence            37788999999999999999999999999999865433222  2345678888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|++++.+.+.+..++..+++|||+++++|.+.+...  ..+++..+..++.|++.||.|||+.||+||||
T Consensus        57 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~di  128 (285)
T cd05632          57 VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDL  128 (285)
T ss_pred             cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            89999999999999999999999999999998877643  35999999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.1e-21  Score=142.09  Aligned_cols=125  Identities=30%  Similarity=0.470  Sum_probs=110.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +.|.+.+.||.|++|.||.+....+++.+++|.+.......    ....+.+|+.+++.                     
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~---------------------   60 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN---------------------   60 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHh---------------------
Confidence            45899999999999999999999999999999986543211    12456778888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+...++++||++++++|.+.+...+.+++..+..++.|++.||.|||+.||+|+||
T Consensus        61 ---l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl  130 (263)
T cd06625          61 ---LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDI  130 (263)
T ss_pred             ---CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence               8999999999999999999999999999999999988778999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0667|consensus

Probab=99.88  E-value=7.2e-22  Score=154.36  Aligned_cols=136  Identities=23%  Similarity=0.349  Sum_probs=115.9

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....+.+..+|.+.+.||+|+||.|.+|.+..|++.||||+++...  ....+...|+.++..+.+.-.           
T Consensus       178 ~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~-----------  244 (586)
T KOG0667|consen  178 LVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDP-----------  244 (586)
T ss_pred             EEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCC-----------
Confidence            4556677779999999999999999999999999999999995432  334566778999988552100           


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             -+.-|+++++++|...+++|||+|.+ ..+|.++++.+.  .++...++.++.||+.||.+||+.||||+||
T Consensus       245 -------~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDL  315 (586)
T KOG0667|consen  245 -------DDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDL  315 (586)
T ss_pred             -------CCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence                   24558999999999999999999999 669999999775  4889999999999999999999999999997

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=9.8e-22  Score=143.09  Aligned_cols=119  Identities=27%  Similarity=0.481  Sum_probs=104.0

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      +.||.|+||.||+|.+..+++.+++|.+...........+..|+.+++.                        ++|+||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~~i~   56 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ------------------------YSHPNIV   56 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh------------------------CCCCCcc
Confidence            4689999999999999999999999987543322233567788888888                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++++.....++++|||+++++|.+++.... .+++..+..++.|++.||.|||++||+|+||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  120 (252)
T cd05084          57 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDL  120 (252)
T ss_pred             eEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            99999999999999999999999999987544 5899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=1e-21  Score=148.45  Aligned_cols=121  Identities=26%  Similarity=0.452  Sum_probs=104.5

Q ss_pred             EEeeeccc--ceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         33 LKELLGTG--AFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        33 ~~~~lg~g--~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      +++.||+|  +|++||++.++.+++.||+|.+....... ....+..|+.+++.                        ++
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   57 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKL------------------------FN   57 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHh------------------------cC
Confidence            45789999  67899999999999999999986543222 22456678888887                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||||+++++++..++..|++|||+++++|.+++...  ..+++..+..++.|++.||+|||++||+||||
T Consensus        58 hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dl  127 (327)
T cd08227          58 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSV  127 (327)
T ss_pred             CCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            999999999999999999999999999999998653  34899999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.88  E-value=2.7e-21  Score=144.77  Aligned_cols=124  Identities=25%  Similarity=0.388  Sum_probs=110.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|.+.+.||.|+||.||++.+..+++.+++|.+.......  ....+..|+.+++.                        
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~------------------------   57 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTF------------------------   57 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHh------------------------
Confidence            6899999999999999999999999999999987543211  22456678888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++.+..++.++++||++++++|.+++...+.+++..+..++.|++.||+|||++|++||||
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  127 (305)
T cd05609          58 AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDL  127 (305)
T ss_pred             CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            8899999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.88  E-value=2.8e-21  Score=141.76  Aligned_cols=125  Identities=25%  Similarity=0.407  Sum_probs=108.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.++||.+.......  ....+..|+.+++.                       
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   58 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQ-----------------------   58 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHh-----------------------
Confidence            47999999999999999999999999999999886533221  12456778888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++++.+.+.+..+++|||+++++|.+++..    ...+++..+..++.|++.||+|||++|++|+||
T Consensus        59 -l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  132 (267)
T cd08228          59 -LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDI  132 (267)
T ss_pred             -CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCC
Confidence             8999999999999999999999999999999887753    234889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.88  E-value=3e-21  Score=143.25  Aligned_cols=124  Identities=27%  Similarity=0.466  Sum_probs=107.5

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .|...+.||.|+||.||++.+..+++.+|+|.+........  ...+..|+.+++.                        
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~------------------------   56 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEK------------------------   56 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHh------------------------
Confidence            37788999999999999999999999999999865433222  2345678888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|++++.+.+.+.+.+.++++|||+++++|.+++...+  .+++..+..++.|++.||.|||+.||+||||
T Consensus        57 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05630          57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDL  128 (285)
T ss_pred             CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            899999999999999999999999999999999885433  4889999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.88  E-value=3.3e-21  Score=152.50  Aligned_cols=125  Identities=22%  Similarity=0.363  Sum_probs=107.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecC-CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESREN-GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ...|.+.+.||+|++|.||+|....+ ++.+++|.+..... .....+..|+.++..                       
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~-~~~~~~~~E~~~l~~-----------------------  121 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE-RQAAYARSELHCLAA-----------------------  121 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH-HHHHHHHHHHHHHHh-----------------------
Confidence            34599999999999999999998877 78899987643321 222456678888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++.+...+.+|++|||+++++|.+.+..    ..++++..+..++.||+.||.|||++||+||||
T Consensus       122 -l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDl  195 (478)
T PTZ00267        122 -CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDL  195 (478)
T ss_pred             -CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCc
Confidence             8999999999999999999999999999999987753    345899999999999999999999999999997

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=4.7e-21  Score=140.05  Aligned_cols=125  Identities=27%  Similarity=0.507  Sum_probs=112.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||++.+..+++.+++|.+...... ....+..|+.+++.                        
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~------------------------   56 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKE------------------------   56 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHh------------------------
Confidence            35799999999999999999999988999999998654322 34667888888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|||++++++.+.+.+.+|++||++.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||
T Consensus        57 ~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  127 (262)
T cd06613          57 CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDI  127 (262)
T ss_pred             CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Confidence            89999999999999999999999999999999988765 67999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=2.1e-21  Score=142.44  Aligned_cols=126  Identities=19%  Similarity=0.351  Sum_probs=108.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++|.+.+.||.|+||.||+|.+..+   ...+++|.+...........+.+|+.++..                     
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~---------------------   61 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQ---------------------   61 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHh---------------------
Confidence            35799999999999999999998643   468999988654333333556778888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++.+..++..+++||++++++|.+++... +.++...+..++.|++.||+|||++||+|+||
T Consensus        62 ---l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di  132 (266)
T cd05033          62 ---FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDL  132 (266)
T ss_pred             ---CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               88999999999999999999999999999999998754 46899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0660|consensus

Probab=99.88  E-value=2.7e-22  Score=147.35  Aligned_cols=128  Identities=30%  Similarity=0.469  Sum_probs=109.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      -.+..+|...+.||.|+||.|..+.++.+++.||||.+....... ...+..+|+.+++.                    
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~--------------------   77 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRH--------------------   77 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHH--------------------
Confidence            344557777899999999999999999999999999885222111 22567899999999                    


Q ss_pred             ccccCCCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+.+.+.+..     -+.+|+|+|++ +.+|.+.++++..++.+.+..++.||+.||.|+|+.||+||||
T Consensus        78 ----~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDL  151 (359)
T KOG0660|consen   78 ----LRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDL  151 (359)
T ss_pred             ----hcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccccccc
Confidence                889999999999864     25799999999 6799999998888999999999999999999999999999997

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=1.6e-21  Score=143.30  Aligned_cols=126  Identities=19%  Similarity=0.364  Sum_probs=107.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++|.+.+.||.|+||.||+|.+..++.   .+++|.+...........+..|+.++..                     
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~---------------------   61 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ---------------------   61 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHh---------------------
Confidence            3579999999999999999999865443   7899987543322233567788888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++..++.+|++||++++++|.+++... +.++...+..++.|++.||+|||++|++||||
T Consensus        62 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl  132 (267)
T cd05066          62 ---FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL  132 (267)
T ss_pred             ---CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhh
Confidence               88999999999999999999999999999999998764 45899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.88  E-value=4.6e-21  Score=139.79  Aligned_cols=124  Identities=31%  Similarity=0.524  Sum_probs=110.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|++.+.||.|+||.|+.+....+++.+++|.+...... .....+.+|+.+++.                        +
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~------------------------~   56 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSL------------------------L   56 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHh------------------------C
Confidence            589999999999999999999999999999998654322 223557788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++++++.+.+.++++|||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  127 (256)
T cd08221          57 QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDI  127 (256)
T ss_pred             CCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence            9999999999999999999999999999999998765  45899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.88  E-value=4.3e-21  Score=142.00  Aligned_cols=125  Identities=29%  Similarity=0.400  Sum_probs=109.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|++.+.||.|++|.||++.+..+++.+++|.+....... ....+..|+.++..                        
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------   56 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQ------------------------   56 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHh------------------------
Confidence            47999999999999999999999899999999986543222 22446788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+.....++++|||++++.|..+......+++..+..++.||+.||+|||+.|++|+||
T Consensus        57 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl  126 (286)
T cd07847          57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDV  126 (286)
T ss_pred             CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence            8899999999999999999999999998888777766667999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.87  E-value=2.1e-21  Score=142.30  Aligned_cols=122  Identities=32%  Similarity=0.503  Sum_probs=102.1

Q ss_pred             EEEeeecccceeEEEEEEEe----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         32 ILKELLGTGAFSEVRLAESR----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.+.||.|.||.||+|.+.    ..+..|+||.+...........+..|+..+..                        
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~------------------------   57 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRK------------------------   57 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHT------------------------
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccc------------------------
Confidence            46789999999999999998    34678999998543222234677888888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++...+.++++|||+++++|.+++...  ..++......++.||+.||.|||+++++|+||
T Consensus        58 l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l  129 (259)
T PF07714_consen   58 LRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNL  129 (259)
T ss_dssp             HSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            78999999999999888899999999999999999886  56999999999999999999999999999996

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.5e-21  Score=144.67  Aligned_cols=125  Identities=29%  Similarity=0.481  Sum_probs=110.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|++|.||+|.+..+++.+++|.+.......  ....+..|+.++..                       
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT-----------------------   57 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHh-----------------------
Confidence            47999999999999999999999999999999997654332  22456778888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+......|++||++.+++|.+++...  ..+++..+..++.|++.||+|||+.|++|+||
T Consensus        58 -l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  129 (316)
T cd05574          58 -LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL  129 (316)
T ss_pred             -CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence             88999999999999999999999999999999988754  45899999999999999999999999999997

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=2.2e-21  Score=145.16  Aligned_cols=126  Identities=23%  Similarity=0.453  Sum_probs=104.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcE--EEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTM--FAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.|.+.+.||.|+||.||+|.+..++..  +++|.+...........+.+|+.++..                      
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~----------------------   63 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK----------------------   63 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHH----------------------
Confidence            34799999999999999999998877654  466665432222223456778888887                      


Q ss_pred             ccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHH
Q psy13106        106 ERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       106 ~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                        + +|+||+++++++.+.+.+|++|||+++++|.+++....                .+++..++.++.|++.||+|||
T Consensus        64 --l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH  141 (303)
T cd05088          64 --LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS  141 (303)
T ss_pred             --hcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH
Confidence              5 79999999999999999999999999999999986432                4788999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       142 ~~gi~H~dl  150 (303)
T cd05088         142 QKQFIHRDL  150 (303)
T ss_pred             hCCcccccc
Confidence            999999997

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.2e-21  Score=144.76  Aligned_cols=125  Identities=30%  Similarity=0.491  Sum_probs=110.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||++.+..++..+++|.+..... .....+..|+.+++.                        
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~------------------------   58 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE-EELEDFMVEIDILSE------------------------   58 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH-HHHHHHHHHHHHHHh------------------------
Confidence            4579999999999999999999988899999999864321 223456778888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+..+..+|++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  129 (280)
T cd06611          59 CKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDL  129 (280)
T ss_pred             CCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            89999999999999999999999999999999988764 46999999999999999999999999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.87  E-value=3.7e-21  Score=159.85  Aligned_cols=133  Identities=32%  Similarity=0.503  Sum_probs=113.3

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ...++...++|.+++.||.|+||.||+|.+..++..+++|++....... ....+..|+.++..                
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~----------------   68 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRE----------------   68 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHH----------------
Confidence            3456677789999999999999999999999999999999986543222 23567788988888                


Q ss_pred             CcccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---
Q psy13106        100 SNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEA---  170 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---  170 (177)
                              +.||||++++++|..  +..+|+||||+++++|.+++..    ...+++..++.|+.||+.||.|||+.   
T Consensus        69 --------L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~  140 (1021)
T PTZ00266         69 --------LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG  140 (1021)
T ss_pred             --------cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence                    899999999998853  4679999999999999998864    24699999999999999999999985   


Q ss_pred             ----CccccCC
Q psy13106        171 ----RYLSKPR  177 (177)
Q Consensus       171 ----giiH~Dl  177 (177)
                          +||||||
T Consensus       141 ~~~k~IVHRDL  151 (1021)
T PTZ00266        141 PNGERVLHRDL  151 (1021)
T ss_pred             cccCCceeccC
Confidence                4999997

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2.9e-21  Score=142.10  Aligned_cols=124  Identities=30%  Similarity=0.459  Sum_probs=107.8

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc---------chhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK---------EDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~---------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      +|.+.+.||.|++|.||+|....+++.+++|.+........         .+.+..|+.++..                 
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-----------------   64 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKD-----------------   64 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHh-----------------
Confidence            58889999999999999999998899999998853221111         1245667777777                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++|+|++++++++...+..+++|||+++++|.+++...+.++...+..++.||+.||.|||++|++|+||
T Consensus        65 -------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  134 (272)
T cd06629          65 -------LDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDL  134 (272)
T ss_pred             -------cCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCC
Confidence                   8999999999999999999999999999999999988778999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.87  E-value=7.4e-21  Score=139.52  Aligned_cols=125  Identities=31%  Similarity=0.486  Sum_probs=107.8

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..|.+.+.||.|+||.||.+.+..+++.+++|.+.......    ....+.+|+.+++.                     
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~---------------------   60 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKN---------------------   60 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHh---------------------
Confidence            46899999999999999999999999999999885432111    12456778888888                     


Q ss_pred             cccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|+||+++++.+.+.  ..++++||++++++|.+++.....+++..+..++.|++.||+|||++|++|+||
T Consensus        61 ---l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl  132 (265)
T cd06652          61 ---LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDI  132 (265)
T ss_pred             ---cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence               8999999999988753  568899999999999999987777899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0193|consensus

Probab=99.87  E-value=2e-22  Score=156.49  Aligned_cols=132  Identities=18%  Similarity=0.333  Sum_probs=113.9

Q ss_pred             CCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-hhHHHHHHHHHhhcccccccccccc
Q psy13106         18 KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        18 ~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .+....++...+...+.+.||+|+||+||+|+|..   .||||++.-....+.. +.+..|+.++++             
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkk-------------  444 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKK-------------  444 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhh-------------
Confidence            44456777788889999999999999999999974   5999999655443333 678899999999             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                                 ..|.||+-+.+++..+.. .||+.+|+|.+|..++.- ..+|.....+.|+.||++||.|||.++||||
T Consensus       445 -----------TRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHr  512 (678)
T KOG0193|consen  445 -----------TRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHR  512 (678)
T ss_pred             -----------cchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence                       889999999999987766 999999999999998863 3469999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       513 DL  514 (678)
T KOG0193|consen  513 DL  514 (678)
T ss_pred             hc
Confidence            97

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.87  E-value=3.3e-21  Score=142.50  Aligned_cols=121  Identities=19%  Similarity=0.277  Sum_probs=105.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|++.+.||.|+||.||+|.+..+++.+++|.+...........+..|+.++..                        +
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~------------------------l   56 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYK------------------------C   56 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHh------------------------C
Confidence            3688899999999999999999999999999998654322233557788888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|||++++++.+...+..+++|||+++++|..+    ..+++..+..++.|++.||.|||+.||+|+||
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  121 (279)
T cd06619          57 DSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDV  121 (279)
T ss_pred             CCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCC
Confidence            999999999999999999999999999888654    34788999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.87  E-value=7.5e-21  Score=141.30  Aligned_cols=124  Identities=27%  Similarity=0.434  Sum_probs=106.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+++|.+.............+|+.+++.                        +
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~------------------------l   60 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG------------------------L   60 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh------------------------c
Confidence            5799999999999999999999999999999998655433333456778888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++++++......|++|||+. +++.+.+... ..++...+..++.|++.||.|||+.||+|+||
T Consensus        61 ~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  129 (291)
T cd07870          61 KHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDL  129 (291)
T ss_pred             CCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999999999995 6777766543 45788899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.87  E-value=2.1e-21  Score=143.05  Aligned_cols=125  Identities=23%  Similarity=0.392  Sum_probs=107.9

Q ss_pred             cceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +.|.+.+.||.|+||.||+|..+.     ....+++|.+...........+.+|++++..                    
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~--------------------   64 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRK--------------------   64 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHh--------------------
Confidence            579999999999999999999754     3467899987543322233567889999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG---------SYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                          +.|+|++++++++.+....|++||++++++|.+++....         .+++..+..++.|++.||+|||++||+|
T Consensus        65 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H  140 (275)
T cd05046          65 ----LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVH  140 (275)
T ss_pred             ----cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCccc
Confidence                889999999999998899999999999999999987655         6899999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       141 ~dl  143 (275)
T cd05046         141 RDL  143 (275)
T ss_pred             CcC
Confidence            997

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.87  E-value=4.1e-21  Score=158.79  Aligned_cols=125  Identities=22%  Similarity=0.316  Sum_probs=107.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.||+|.+.......  ....+.+|+.++..                       
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~-----------------------   58 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD-----------------------   58 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHh-----------------------
Confidence            58999999999999999999999999999999986432211  12457788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-----------GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                       ++|||++++++.+.+++..|++|||++|++|.+++...           ...+...+..++.||+.||+|||++||+||
T Consensus        59 -L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHR  137 (932)
T PRK13184         59 -LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHR  137 (932)
T ss_pred             -CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence             89999999999999999999999999999999988631           124566788899999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       138 DL  139 (932)
T PRK13184        138 DL  139 (932)
T ss_pred             CC
Confidence            97

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.87  E-value=3.1e-21  Score=141.78  Aligned_cols=125  Identities=20%  Similarity=0.397  Sum_probs=107.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+|.+.+.||+|+||.||+|.+..++.   .+++|.+...........+..|+.+++.                      
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----------------------   61 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ----------------------   61 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh----------------------
Confidence            468999999999999999999886654   6999998643222233567788888888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.||||+++.+++.+...++++|||+++++|.+++... +.++...+..++.|++.||+|||++|++|+||
T Consensus        62 --l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl  132 (269)
T cd05065          62 --FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDL  132 (269)
T ss_pred             --CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence              88999999999999999999999999999999988754 45899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=4.6e-21  Score=140.61  Aligned_cols=124  Identities=28%  Similarity=0.523  Sum_probs=108.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--------chhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--------EDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +|.+...||.|++|.||+|.+..+++.+++|.+........        ...+.+|+.+++.                  
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~------------------   62 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE------------------   62 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHh------------------
Confidence            47888999999999999999988899999998864432211        1346677888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+....+++|||+++++|.+++...+.+++..+..++.|++.||+|||++|++||||
T Consensus        63 ------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di  132 (267)
T cd06628          63 ------LQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDI  132 (267)
T ss_pred             ------cCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence                  8999999999999999999999999999999999988788999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.87  E-value=7.8e-21  Score=141.85  Aligned_cols=130  Identities=27%  Similarity=0.432  Sum_probs=113.0

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ........+|.+.+.||.|++|.||++.+..+++.+++|.+..... .....+..|+.+++.                  
T Consensus        12 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~------------------   72 (297)
T cd06656          12 VSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRE------------------   72 (297)
T ss_pred             cccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHh------------------
Confidence            3445566799999999999999999999998999999999864332 223456778888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++|+|++++++.+..++..|++|||+++++|.+++.+ ..+++..+..++.|++.||.|||+.|++||||
T Consensus        73 ------~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL  141 (297)
T cd06656          73 ------NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDI  141 (297)
T ss_pred             ------CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                  8999999999999999999999999999999998865 45889999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.87  E-value=4.7e-21  Score=143.55  Aligned_cols=130  Identities=22%  Similarity=0.365  Sum_probs=107.5

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecC-------CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESREN-------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .....++|.+.+.||+|+||.||++.+...       ...+|+|.+...........+..|+.++..             
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-------------   79 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-------------   79 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHH-------------
Confidence            344457899999999999999999987532       346999988643222223456778888887             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHH
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQ  159 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~q  159 (177)
                                 + +|+|++++++.+...+..|++|||+++++|.+++....                .++...+..++.|
T Consensus        80 -----------l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  148 (307)
T cd05098          80 -----------IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQ  148 (307)
T ss_pred             -----------hcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence                       5 79999999999999999999999999999999997542                3788899999999


Q ss_pred             HHHHHHHHHhCCccccCC
Q psy13106        160 VLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       160 i~~~l~~LH~~giiH~Dl  177 (177)
                      ++.||+|||++|++||||
T Consensus       149 i~~aL~~lH~~gi~H~dl  166 (307)
T cd05098         149 VARGMEYLASKKCIHRDL  166 (307)
T ss_pred             HHHHHHHHHHCCcccccc
Confidence            999999999999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.87  E-value=1.1e-20  Score=141.05  Aligned_cols=130  Identities=25%  Similarity=0.431  Sum_probs=113.2

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ........+|.+.+.||.|++|.||++.+..+++.+++|.+...... ....+..|+.+++.                  
T Consensus        13 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~------------------   73 (296)
T cd06654          13 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRE------------------   73 (296)
T ss_pred             cccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHh------------------
Confidence            34455667999999999999999999999989999999998654322 23556778888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            +.|+|++++++.+..+...|++|||+++++|.+++.. ..++...+..++.|++.||+|||+.||+||||
T Consensus        74 ------~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dL  142 (296)
T cd06654          74 ------NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (296)
T ss_pred             ------CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                  8899999999999999999999999999999998865 45899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.87  E-value=2.4e-21  Score=150.06  Aligned_cols=99  Identities=26%  Similarity=0.415  Sum_probs=80.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .......+.|.+.+.||.|+||.||+|.+.     .++..||+|.+...........+..|+.++..             
T Consensus        30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~-------------   96 (401)
T cd05107          30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSH-------------   96 (401)
T ss_pred             CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHh-------------
Confidence            345555667999999999999999999964     34568999999654322233467788888888             


Q ss_pred             cCCCcccccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh
Q psy13106         97 DNNSNDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE  144 (177)
Q Consensus        97 ~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  144 (177)
                                 +. ||||+++++.+..+..++++||||.+|+|.+++..
T Consensus        97 -----------l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107          97 -----------LGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             -----------cCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence                       66 99999999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.87  E-value=4.8e-21  Score=142.28  Aligned_cols=129  Identities=22%  Similarity=0.331  Sum_probs=105.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +...++|.+.+.||+|+||.||+|..+.     .+..+|+|.+...........+..|..+++.                
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~----------------   65 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG----------------   65 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHh----------------
Confidence            3456789999999999999999997652     2457999987543322222345667777777                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------GSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                              ++|+|++++++.+.++...+++|||+++++|.+++...          ...+...+..++.|++.||.|||+
T Consensus        66 --------l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  137 (288)
T cd05061          66 --------FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA  137 (288)
T ss_pred             --------CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999999999999999999999998643          224567888999999999999999


Q ss_pred             CCccccCC
Q psy13106        170 ARYLSKPR  177 (177)
Q Consensus       170 ~giiH~Dl  177 (177)
                      +||+||||
T Consensus       138 ~~i~H~di  145 (288)
T cd05061         138 KKFVHRDL  145 (288)
T ss_pred             CCCcCCCC
Confidence            99999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=1.8e-21  Score=149.57  Aligned_cols=123  Identities=22%  Similarity=0.365  Sum_probs=106.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .|.+.+.||.|+||.||++.+..+++.||+|.+...... .....+.+|+.++..                        +
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~------------------------l   56 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCF------------------------F   56 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHh------------------------C
Confidence            377889999999999999999999999999988543211 122456788888888                        8


Q ss_pred             CCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++++++...+     .+|++|||+. ++|.+.+.....+++..++.++.||+.||.|||++||+||||
T Consensus        57 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dl  129 (372)
T cd07853          57 KHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDI  129 (372)
T ss_pred             CCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            9999999999998766     7999999995 588888877778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.87  E-value=3.7e-21  Score=142.07  Aligned_cols=127  Identities=27%  Similarity=0.388  Sum_probs=108.9

Q ss_pred             cccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+.|.+.+.||+|++|.||+|.+..     ++..+++|.+...........+..|+.+++.                  
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~------------------   65 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK------------------   65 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh------------------
Confidence            34679999999999999999999987     6788999987543322233456778888888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-------SYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                            ++|+||+++++++.+....+++||++++++|.+++....       .+++..+..++.||+.||+|||++|++|
T Consensus        66 ------l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH  139 (277)
T cd05036          66 ------FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIH  139 (277)
T ss_pred             ------CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence                  899999999999988889999999999999999987543       4888999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       140 ~dl  142 (277)
T cd05036         140 RDI  142 (277)
T ss_pred             ccc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.87  E-value=9.4e-21  Score=138.80  Aligned_cols=125  Identities=24%  Similarity=0.404  Sum_probs=109.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|++|.||+|....+++.+++|.+.......  ....+.+|+.+++.                       
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~-----------------------   58 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQ-----------------------   58 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHh-----------------------
Confidence            57999999999999999999999899999999986432221  23567788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|++++++++.+...+..+++|||+++++|.+++..    ...+++..+..++.|++.||.|||+.||+|+||
T Consensus        59 -~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  132 (267)
T cd08224          59 -LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDI  132 (267)
T ss_pred             -CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCc
Confidence             8899999999999999999999999999999998864    234889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.87  E-value=9.3e-21  Score=138.73  Aligned_cols=125  Identities=27%  Similarity=0.482  Sum_probs=110.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+.+.||.|+||.||++....++..+++|.+...........+.+|+.+++.                        +
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQ------------------------C   56 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHh------------------------c
Confidence            4699999999999999999999888999999998654433344667788888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+...+..+++||++++++|.+++...   ..+++..+..++.|++.||+|||++|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l  128 (267)
T cd06610          57 NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDI  128 (267)
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            9999999999999999999999999999999998764   34899999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.87  E-value=7.4e-21  Score=139.12  Aligned_cols=124  Identities=27%  Similarity=0.414  Sum_probs=111.4

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||++....+++.+++|.+...... .....+..|+.+++.                        +
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~------------------------l   56 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLEL------------------------L   56 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHh------------------------C
Confidence            589999999999999999999888999999998765432 133567788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++++.....+.+++++||+++++|.+++.....+++..+..++.|++.||+|||+.|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl  125 (264)
T cd06626          57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDI  125 (264)
T ss_pred             CCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            999999999999889999999999999999999988777899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.87  E-value=6.3e-21  Score=138.99  Aligned_cols=124  Identities=32%  Similarity=0.545  Sum_probs=109.3

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +|+..+.||+|++|.||+|....+++.+++|.+.......    ....+.+|+.+++.                      
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~----------------------   58 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSK----------------------   58 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHh----------------------
Confidence            4778899999999999999999889999999986543221    22456778888887                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+.....++++|||+++++|.+++.....+++..+..++.||+.||+|||+.|++|+||
T Consensus        59 --~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  128 (258)
T cd06632          59 --LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDI  128 (258)
T ss_pred             --cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence              8999999999999998999999999999999999988777999999999999999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.87  E-value=8.9e-21  Score=140.24  Aligned_cols=123  Identities=26%  Similarity=0.435  Sum_probs=107.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+.+.||.|++|.||+|.+..++..+++|.+...........+..|+.+++.                        ++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~------------------------l~   56 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE------------------------LK   56 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh------------------------hc
Confidence            488999999999999999999999999999998765433334566778888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+.+.+..+++|||+++ +|.+++...   ..+++..+..++.|++.||+|||+.|++||||
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl  126 (284)
T cd07836          57 HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDL  126 (284)
T ss_pred             CCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence            99999999999999999999999975 888887654   35899999999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.87  E-value=1.1e-20  Score=137.89  Aligned_cols=124  Identities=28%  Similarity=0.555  Sum_probs=109.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|++.+.||.|+||.+|++....+++.+++|.+...... .....+..|+.+++.                        +
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSN------------------------M   56 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHh------------------------C
Confidence            589999999999999999999999999999998654322 223567788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++.+.+.+.+..+++||++.+++|.+.+....  .+++..+..++.|++.||.|||++|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l  127 (256)
T cd08218          57 KHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDI  127 (256)
T ss_pred             CCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            99999999999999999999999999999999887543  4789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.87  E-value=4.8e-21  Score=142.74  Aligned_cols=123  Identities=29%  Similarity=0.451  Sum_probs=107.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +|.+.+.||.|++|.||+|.+..+++.+++|.+.......    ....+..|+.+++.                      
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~----------------------   58 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQE----------------------   58 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhh----------------------
Confidence            4888999999999999999999899999999987544321    12345667788877                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++++.+.+.+++||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+|+||
T Consensus        59 --~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl  128 (298)
T cd07841          59 --LKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDL  128 (298)
T ss_pred             --cCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence              88999999999999999999999999 889999997765 7999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0201|consensus

Probab=99.87  E-value=3.6e-23  Score=155.20  Aligned_cols=126  Identities=28%  Similarity=0.511  Sum_probs=117.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|...+.||+|+||.||+|.+..+++.||+|+++..........+..|+.++..                        
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~------------------------   67 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQ------------------------   67 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHh------------------------
Confidence            34688889999999999999999999999999999887766666788889999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++||.++|+.+.....+|++||||.||++.+.+.....+++..+..++++++.||.|||.++.+||||
T Consensus        68 ~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDI  137 (467)
T KOG0201|consen   68 CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDI  137 (467)
T ss_pred             cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccc
Confidence            8899999999999999999999999999999999988877799999999999999999999999999997

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.87  E-value=6.7e-21  Score=140.85  Aligned_cols=117  Identities=31%  Similarity=0.438  Sum_probs=100.7

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||.||++....+++.+|+|.+.......  .......|..++..                        ++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~------------------------l~hp~i~   56 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEK------------------------VNSPFIV   56 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHh------------------------cCCCcEE
Confidence            689999999999999999999999986543322  12344568888888                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.+.+.++..+|++|||+++++|.+.+....  .++...+..++.||+.||+|||+.||+||||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di  121 (277)
T cd05607          57 NLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDM  121 (277)
T ss_pred             EEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccC
Confidence            99999999999999999999999998876443  4888999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.87  E-value=1.1e-20  Score=137.66  Aligned_cols=124  Identities=27%  Similarity=0.441  Sum_probs=109.3

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|++|.||++.+..+++.+++|.+....... ....+..|+.+++.                        +
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------~   56 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL------------------------L   56 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh------------------------C
Confidence            5899999999999999999999999999999987543222 23567788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+...+..+++||++++++|.+++...  ..+++..+..++.|++.+|+|||++|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  127 (256)
T cd08220          57 SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL  127 (256)
T ss_pred             CCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            9999999999999999999999999999999998764  34889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=3e-21  Score=143.02  Aligned_cols=126  Identities=19%  Similarity=0.284  Sum_probs=112.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|++.+.||.|+||.||++.+..+++.+++|++...........+.+|+.++..                        
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~------------------------   59 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHE------------------------   59 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHH------------------------
Confidence            35789999999999999999999999999999988654322234567788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      ++|+||+++++.+...+.++++|||+++++|.+++...+.++...+..++.|++.+|.|||+ .|++||||
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl  130 (284)
T cd06620          60 CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDI  130 (284)
T ss_pred             cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCC
Confidence            89999999999999999999999999999999998887789999999999999999999997 69999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0658|consensus

Probab=99.87  E-value=5.6e-22  Score=145.95  Aligned_cols=119  Identities=24%  Similarity=0.396  Sum_probs=100.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      -.|...+.+|+|+||.||.|...++++.+|||.+-...     .--.+|+.+++.                        +
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-----r~knrEl~im~~------------------------l   74 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-----RYKNRELQIMRK------------------------L   74 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-----CcCcHHHHHHHh------------------------c
Confidence            36889999999999999999999999999999863322     223468888887                        8


Q ss_pred             CCCCceeeEEEEecC--C---eEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDK--H---KVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~--~---~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++.-+|...  .   ++.+||||++. +|.+.++.    +..++.-.++.+++||.+||+|||+.||+||||
T Consensus        75 ~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDI  151 (364)
T KOG0658|consen   75 DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDI  151 (364)
T ss_pred             CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCC
Confidence            999999998888632  2   56789999954 89888874    567999999999999999999999999999997

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=8.4e-21  Score=150.69  Aligned_cols=132  Identities=27%  Similarity=0.421  Sum_probs=108.6

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .......++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.++..                 
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-----------------   87 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN-----------------   87 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc-----------------
Confidence            334455679999999999999999999999999999999986543221 22445677777776                 


Q ss_pred             cccccccCCCCCceeeEEEEecCC--------eEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKH--------KVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                             ++|+|+++++..+....        .++++|||+++|+|.+++...    ..+++..+..++.|++.||.|||
T Consensus        88 -------~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH  160 (496)
T PTZ00283         88 -------CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH  160 (496)
T ss_pred             -------CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                   88999999988775322        378999999999999988643    35899999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       161 ~~~IiHrDL  169 (496)
T PTZ00283        161 SKHMIHRDI  169 (496)
T ss_pred             hCCEecCCC
Confidence            999999997

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.86  E-value=1.2e-20  Score=139.56  Aligned_cols=123  Identities=23%  Similarity=0.383  Sum_probs=106.5

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .|.+.+.||.|++|.||+|.+..+++.+++|.+....... ....+.+|+.++..                        +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKE------------------------L   56 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHh------------------------c
Confidence            4889999999999999999999999999999986543222 23557788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|||++++++.+.+++.+|++|||+. ++|.+++...   ..+++..+..++.||+.||+|||++||+|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl  127 (285)
T cd07861          57 QHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDL  127 (285)
T ss_pred             CCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            89999999999999999999999996 5888877543   45899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.86  E-value=4.3e-21  Score=141.73  Aligned_cols=125  Identities=24%  Similarity=0.499  Sum_probs=109.7

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|+..+.||.|+||.||+|.+..+++.+++|.+...........+..|+.++..                        
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~------------------------   58 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ------------------------   58 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHh------------------------
Confidence            34688889999999999999999989999999998654333333567778888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+.+++..|++|||+++++|.+++.. .++++..+..++.|++.||+|||+.|++|+||
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl  127 (277)
T cd06640          59 CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence            8999999999999999999999999999999998865 45899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.86  E-value=1.1e-20  Score=137.68  Aligned_cols=124  Identities=23%  Similarity=0.381  Sum_probs=108.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+..|+.+++.                        +
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK------------------------L   56 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHh------------------------c
Confidence            478899999999999999999999999999998654322 223556778888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|||++++++.+.+.+..+++|||+++++|.+++...  ..++...+..++.|++.||.|||+.||+|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl  127 (256)
T cd08529          57 DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDI  127 (256)
T ss_pred             CCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999999999999999999999999998764  45889999999999999999999999999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0612|consensus

Probab=99.86  E-value=4.5e-23  Score=169.05  Aligned_cols=128  Identities=25%  Similarity=0.428  Sum_probs=115.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+++.||+|+||.|.+++.+.+++.||+|++.++..-  .....+..|..++..                    
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~--------------------  131 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVF--------------------  131 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHc--------------------
Confidence            4456899999999999999999999999999999999876543  233567777778877                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          -+.+.|++++-.|.+++++|+||||++||+|..++..-.++|+++++.|+.+|+-||.-||+.|+|||||
T Consensus       132 ----~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDi  201 (1317)
T KOG0612|consen  132 ----GNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDI  201 (1317)
T ss_pred             ----CCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccC
Confidence                6888999999999999999999999999999999988778999999999999999999999999999997

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.86  E-value=8.6e-21  Score=145.10  Aligned_cols=125  Identities=26%  Similarity=0.360  Sum_probs=104.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||++.+..+++.+|+|.+....... ....+.+|+.+++.                     
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   76 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC---------------------   76 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHh---------------------
Confidence            45678999999999999999999999999999999986443221 23456678888887                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++...      ..+|++|||+++ +|.+.+..  .+++..+..++.||+.||.|||++||+||||
T Consensus        77 ---l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDl  149 (359)
T cd07876          77 ---VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  149 (359)
T ss_pred             ---CCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               8999999999988644      357999999965 67666543  3889999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.86  E-value=2.2e-21  Score=147.60  Aligned_cols=128  Identities=22%  Similarity=0.324  Sum_probs=104.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...++|.+.+.||.|+||.||+|.+.     .+++.||||.+...........+..|+.++..                 
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-----------------   66 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-----------------   66 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHh-----------------
Confidence            44568999999999999999999853     45678999998654322233557788888888                 


Q ss_pred             cccccccC-CCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc---------------------------------
Q psy13106        101 NDKDKERL-THPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK---------------------------------  145 (177)
Q Consensus       101 ~~~~~~~~-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~---------------------------------  145 (177)
                             + +|+||+++++++.. ...++++||||++++|.+++...                                 
T Consensus        67 -------l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (343)
T cd05103          67 -------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLD  139 (343)
T ss_pred             -------ccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcc
Confidence                   5 68999999987754 45689999999999999988642                                 


Q ss_pred             ----------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        146 ----------------------------------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       146 ----------------------------------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                        ..++...+..++.||+.||+|||++||+||||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~di  205 (343)
T cd05103         140 SITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDL  205 (343)
T ss_pred             ccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                                              12567788899999999999999999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.86  E-value=5.2e-21  Score=142.34  Aligned_cols=126  Identities=23%  Similarity=0.398  Sum_probs=108.7

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC----------------cEEEEEEEecccccccchhHHHHHHHHHhhccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG----------------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR   91 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----------------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~   91 (177)
                      .++|.+++.||.|+||.||++....++                ..+++|.+...........+.+|+.++..        
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~--------   75 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSR--------   75 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHh--------
Confidence            458999999999999999999876543                45799988654333334567788999988        


Q ss_pred             ccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----------CCCHHHHHHHHHHH
Q psy13106         92 LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----------SYTEKDASMLIRQV  160 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi  160 (177)
                                      +.|||++++++++..+...+++||++++++|.+++....           .+++..++.++.|+
T Consensus        76 ----------------l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  139 (296)
T cd05051          76 ----------------LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQI  139 (296)
T ss_pred             ----------------cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHH
Confidence                            889999999999998899999999999999999987655           68999999999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+|||++||+|+||
T Consensus       140 ~~al~~LH~~~i~H~dl  156 (296)
T cd05051         140 ASGMRYLESLNFVHRDL  156 (296)
T ss_pred             HHHHHHHHHcCcccccc
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.86  E-value=9.4e-21  Score=148.51  Aligned_cols=121  Identities=18%  Similarity=0.265  Sum_probs=100.8

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||+|.+..+++.||||.+...     .....+|+.+++.                       
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~~~~~~Ei~il~~-----------------------  115 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----PQYKNRELLIMKN-----------------------  115 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----cchHHHHHHHHHh-----------------------
Confidence            345799999999999999999999999999999987432     1234568888888                       


Q ss_pred             cCCCCCceeeEEEEec--------CCeEEEEEeccCCcchhHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        107 RLTHPNIVQLIETFED--------KHKVYLVMELVTGGELFDRIV----EKGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                       ++|+||+++++++..        ..+++++|||+++ ++.+++.    ....+++..++.++.||+.||+|||++||+|
T Consensus       116 -l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiH  193 (440)
T PTZ00036        116 -LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICH  193 (440)
T ss_pred             -cCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence             899999999887642        2357899999965 7766654    3456999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       194 rDL  196 (440)
T PTZ00036        194 RDL  196 (440)
T ss_pred             CCc
Confidence            997

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.86  E-value=7.4e-21  Score=140.41  Aligned_cols=129  Identities=19%  Similarity=0.313  Sum_probs=106.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +...++|++.+.||.|+||.||.|.+..     ++..+|+|.+...........+..|+.+++.                
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~----------------   65 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE----------------   65 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh----------------
Confidence            3456789999999999999999998652     3567999987543222223456778888877                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------SYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                              ++|+||+++++++.++...+++|||+++++|.+++....          .++...+..++.|++.||.|||+
T Consensus        66 --------l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  137 (277)
T cd05062          66 --------FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA  137 (277)
T ss_pred             --------CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence                    899999999999999999999999999999999986532          24677888999999999999999


Q ss_pred             CCccccCC
Q psy13106        170 ARYLSKPR  177 (177)
Q Consensus       170 ~giiH~Dl  177 (177)
                      .|++|+||
T Consensus       138 ~~~vH~dl  145 (277)
T cd05062         138 NKFVHRDL  145 (277)
T ss_pred             CCcccCCc
Confidence            99999997

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.86  E-value=5.5e-21  Score=142.99  Aligned_cols=132  Identities=22%  Similarity=0.308  Sum_probs=110.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .......++|.+.+.||.|+||.||++.+.     .++..+|+|.+...........+..|+.+++.             
T Consensus        28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------   94 (302)
T cd05055          28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH-------------   94 (302)
T ss_pred             ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHh-------------
Confidence            345566678999999999999999999863     34558999987644322233567788888888             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                 + +|+||+++++.+...+.+|++|||+.+++|.+++....  .+++..+..++.|++.||+|||++||+
T Consensus        95 -----------l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~iv  163 (302)
T cd05055          95 -----------LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI  163 (302)
T ss_pred             -----------ccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence                       6 79999999999999999999999999999999987543  389999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      |+||
T Consensus       164 H~dl  167 (302)
T cd05055         164 HRDL  167 (302)
T ss_pred             hhhh
Confidence            9997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.86  E-value=1.3e-20  Score=137.80  Aligned_cols=124  Identities=24%  Similarity=0.400  Sum_probs=112.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+.+.||.|++|.||++.+..+++.+++|.+...........+..|+..+..                        ++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   57 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS------------------------CE   57 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHh------------------------cC
Confidence            588999999999999999999999999999998655432234667888888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      |+|++++++.+...+.++++|||+++++|.+++.....+++..+..++.|++.||+|||+ .|++|+||
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l  126 (264)
T cd06623          58 SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDI  126 (264)
T ss_pred             CCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCC
Confidence            999999999999999999999999999999999877789999999999999999999999 99999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.86  E-value=1.2e-20  Score=139.90  Aligned_cols=126  Identities=25%  Similarity=0.389  Sum_probs=103.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||+|.+..+++.+|+|.+....... .......|+.+++.+.+                     +
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---------------------~   59 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---------------------F   59 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---------------------c
Confidence            5899999999999999999999999999999986543222 22345667777766432                     5


Q ss_pred             CCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++..     ...++++||++. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||
T Consensus        60 ~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di  134 (288)
T cd07863          60 DHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL  134 (288)
T ss_pred             CCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            89999999998764     245899999996 4888887653  34899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.86  E-value=9.9e-21  Score=138.17  Aligned_cols=122  Identities=25%  Similarity=0.468  Sum_probs=105.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|++.+.||.|+||.||++.++. +..+++|.+....  .....+..|+.+++.                        +
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~--~~~~~~~~e~~~l~~------------------------l   56 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGA--MSEEDFIEEAKVMMK------------------------L   56 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCC--ccHHHHHHHHHHHHH------------------------C
Confidence            468999999999999999998764 4679999875332  223567789999988                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+...++++|||+++++|.+++... +.++...+..++.|++.||+|||++||+||||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05114          57 SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL  126 (256)
T ss_pred             CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            9999999999999999999999999999999988753 45889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG4236|consensus

Probab=99.86  E-value=2.8e-21  Score=148.73  Aligned_cols=125  Identities=36%  Similarity=0.595  Sum_probs=108.8

Q ss_pred             ccceEE--EeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYIL--KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~--~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..-|++  .+.||+|.||+||-|.++++|+.||||+|.+-..... ...+.+|+.+++.                     
T Consensus       561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~---------------------  619 (888)
T KOG4236|consen  561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQN---------------------  619 (888)
T ss_pred             HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHh---------------------
Confidence            334554  4679999999999999999999999999987655443 4678999999999                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV--EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.||.|+.+...|++.+.+++|||.+. |+..+.+.  +.+++++.....++.||+.||.|||.+||+|.||
T Consensus       620 ---l~HPGiV~le~M~ET~ervFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDL  690 (888)
T KOG4236|consen  620 ---LHHPGIVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDL  690 (888)
T ss_pred             ---cCCCCeeEEEEeecCCceEEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccC
Confidence               899999999999999999999999995 56666554  4567999999999999999999999999999997

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.86  E-value=1.2e-20  Score=139.67  Aligned_cols=123  Identities=28%  Similarity=0.449  Sum_probs=108.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|++|.||+|.+..++..+++|.+...... .....+.+|+.+++.                        +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~------------------------~   56 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQA------------------------C   56 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHh------------------------C
Confidence            589999999999999999999989999999998754432 223567788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++++...+.++++||++ +++|.+++.. ...+++..++.++.||+.||+|||+.|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  125 (286)
T cd07832          57 QHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDL  125 (286)
T ss_pred             CCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence            8999999999999999999999999 9999998864 356899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=6.2e-21  Score=140.53  Aligned_cols=124  Identities=26%  Similarity=0.483  Sum_probs=110.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+.+.||.|++|.||++.+..+++.+++|.+...........+.+|+.+++.                        +
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ------------------------C   56 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHH------------------------c
Confidence            3688899999999999999999999999999998654322233556788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++.+.+.+...+|+++|++++++|.+++... ++++..+..++.|++.||.|||++|++|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl  124 (274)
T cd06609          57 RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDI  124 (274)
T ss_pred             CCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            8999999999999999999999999999999998765 6899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.86  E-value=5.2e-21  Score=143.91  Aligned_cols=125  Identities=20%  Similarity=0.297  Sum_probs=104.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+|.+.+.||+|+||.||+|.+..+++    .+|+|.+...........+..|+.+++.                    
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~--------------------   65 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS--------------------   65 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHh--------------------
Confidence            3479999999999999999999876555    4899987543322233567778888887                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++++... ..+++++++++|+|.+++.... .++...+..++.||+.||+|||++||+||||
T Consensus        66 ----l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dl  135 (316)
T cd05108          66 ----VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDL  135 (316)
T ss_pred             ----CCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence                8999999999988754 5678999999999999987653 5889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.86  E-value=8.9e-21  Score=139.02  Aligned_cols=123  Identities=27%  Similarity=0.454  Sum_probs=106.8

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +|++.+.||.|+||.||+|.. .+++.+++|.+.......     ....+.+|+.+++.                     
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~---------------------   58 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKS---------------------   58 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHh---------------------
Confidence            478899999999999999976 467899999886432111     12456778888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++.+++.+.+.++++|||+++++|.+++.+..++++..+..++.|++.||+|||+.||+|+||
T Consensus        59 ---l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  128 (265)
T cd06631          59 ---LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDI  128 (265)
T ss_pred             ---cCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence               8999999999999999999999999999999999988778999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.86  E-value=6.7e-21  Score=140.70  Aligned_cols=124  Identities=24%  Similarity=0.498  Sum_probs=108.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +-|.+.+.||.|+||.||++.+..+++.+|+|.+...........+.+|+.++..                        +
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~------------------------l   59 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ------------------------C   59 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHh------------------------c
Confidence            4688899999999999999999888999999987644332333567778888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+..+...|++|||+.+++|.+++.. ..++...+..++.|++.++.|||+.|++|+||
T Consensus        60 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  127 (277)
T cd06641          60 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCC
Confidence            999999999999999999999999999999998864 45899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=2.2e-21  Score=143.79  Aligned_cols=125  Identities=20%  Similarity=0.298  Sum_probs=108.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|++++.||.|+||.||++.+..++..+++|.+...........+.+|+.++..                        +
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~------------------------~   56 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHK------------------------A   56 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHh------------------------c
Confidence            4688999999999999999999989999999988643222223567788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---GSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      +|+||+++++.+..++.++++|||+++++|.+++...   ..+++..+..++.|++.||.|||+ .||+|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl  129 (286)
T cd06622          57 VSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDV  129 (286)
T ss_pred             CCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCC
Confidence            9999999999999999999999999999998888763   368999999999999999999997 59999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=3.5e-21  Score=143.45  Aligned_cols=126  Identities=24%  Similarity=0.434  Sum_probs=105.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEecC--------------CcEEEEEEEecccccccchhHHHHHHHHHhhccccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESREN--------------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLD   93 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~--------------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~   93 (177)
                      ..+|.+.+.||+|+||.||+|.+..+              ...+|+|.+...........+.+|+.++..          
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~----------   73 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSR----------   73 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHh----------
Confidence            35899999999999999999987543              235899988654322233567789999988          


Q ss_pred             ccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC------------CCCHHHHHHHHHHHH
Q psy13106         94 ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG------------SYTEKDASMLIRQVL  161 (177)
Q Consensus        94 ~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~qi~  161 (177)
                                    ++|+|++++++++...+..+++|||+.+++|.+++....            .++...+..++.|++
T Consensus        74 --------------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  139 (295)
T cd05097          74 --------------LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIA  139 (295)
T ss_pred             --------------CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHH
Confidence                          899999999999999999999999999999999885432            367888999999999


Q ss_pred             HHHHHHHhCCccccCC
Q psy13106        162 EAVDYMHEARYLSKPR  177 (177)
Q Consensus       162 ~~l~~LH~~giiH~Dl  177 (177)
                      .||+|||++|++|+||
T Consensus       140 ~al~~lH~~~i~H~dl  155 (295)
T cd05097         140 SGMKYLASLNFVHRDL  155 (295)
T ss_pred             HHHHHHHhcCeecccc
Confidence            9999999999999997

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=2.3e-20  Score=136.91  Aligned_cols=125  Identities=31%  Similarity=0.485  Sum_probs=108.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc----cccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL----KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~----~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..|.+.+.||.|+||.||++.+..++..+++|.+.....    ......+.+|+.+++.                     
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~---------------------   60 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKN---------------------   60 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHH---------------------
Confidence            469999999999999999999999999999998753221    1122456778888888                     


Q ss_pred             cccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++.+.+.  ..++++||++++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||
T Consensus        61 ---l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl  132 (264)
T cd06653          61 ---LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDI  132 (264)
T ss_pred             ---cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence               8999999999998753  568999999999999999988777999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.86  E-value=8.2e-21  Score=141.22  Aligned_cols=127  Identities=29%  Similarity=0.505  Sum_probs=110.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+.|++++.||.|+||.||++.+..++..+++|.+.... ......+..|+.+++.                      
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~----------------------   65 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILAT----------------------   65 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHh----------------------
Confidence            34567999999999999999999999999999999986432 1223456678888877                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+...+.+|++|||+++++|..++.. ...+++..+..++.|++.+|.|||++|++||||
T Consensus        66 --l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  136 (292)
T cd06644          66 --CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDL  136 (292)
T ss_pred             --CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCC
Confidence              8999999999999999999999999999999887754 345899999999999999999999999999997

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG1152|consensus

Probab=99.86  E-value=1e-21  Score=152.03  Aligned_cols=128  Identities=30%  Similarity=0.486  Sum_probs=110.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-------cccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-------KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-------~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..|...+.+|.|+||.|++|.+++....|.||.|.+...       ...-..+-.|+.++..+..               
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~---------------  625 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNK---------------  625 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhh---------------
Confidence            359999999999999999999999999999999976532       1122456678888888433               


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEecc-CCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELV-TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            -.|+||+++.++|++++++|++||-- ++.+|++++...+.++++++..++.|++-|+++||++|||||||
T Consensus       626 ------~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdi  696 (772)
T KOG1152|consen  626 ------HSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDI  696 (772)
T ss_pred             ------cCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceeccc
Confidence                  24999999999999999999999865 45799999988888999999999999999999999999999997

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.86  E-value=5.1e-21  Score=141.69  Aligned_cols=125  Identities=27%  Similarity=0.415  Sum_probs=108.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+++|.+....... ....+..|+.++..                        
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------   56 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ------------------------   56 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh------------------------
Confidence            46899999999999999999999889999999875433222 22456678888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++++...+..+++|||+++++|..+......++...+..++.||+.||.|||+.|++|+||
T Consensus        57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l  126 (286)
T cd07846          57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDI  126 (286)
T ss_pred             cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            8899999999999999999999999998888877766656899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.2e-20  Score=139.03  Aligned_cols=127  Identities=20%  Similarity=0.309  Sum_probs=106.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..++|.+.+.||.|+||.||++.+...     +..+++|.+...........+.+|+.++..                  
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~------------------   65 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE------------------   65 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHh------------------
Confidence            446899999999999999999998643     378999997543322223456678888877                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------SYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                            ++|+|++++++++......+++|||+++++|.+++....          .+++..+..++.|++.||.|||+.|
T Consensus        66 ------~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  139 (277)
T cd05032          66 ------FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK  139 (277)
T ss_pred             ------CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                  889999999999999999999999999999999986432          2577889999999999999999999


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+||||
T Consensus       140 i~H~di  145 (277)
T cd05032         140 FVHRDL  145 (277)
T ss_pred             cccccc
Confidence            999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=2.3e-20  Score=144.44  Aligned_cols=121  Identities=24%  Similarity=0.379  Sum_probs=104.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....+|.+++.||.|+||.||+|...  ..+..+++|.+...      ....+|+.+++.                    
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~--------------------  142 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKT--------------------  142 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHh--------------------
Confidence            34557999999999999999999764  34678999986432      234678889988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++.+.....+|++||++. ++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus       143 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDl  211 (392)
T PHA03207        143 ----ISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDV  211 (392)
T ss_pred             ----cCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                899999999999999999999999994 689998877777999999999999999999999999999997

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.86  E-value=7.1e-21  Score=140.86  Aligned_cols=123  Identities=25%  Similarity=0.347  Sum_probs=107.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||+|.+..+++.+++|.++...... ....+..|+.+++.                        +
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~------------------------l   56 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE------------------------L   56 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh------------------------c
Confidence            5889999999999999999999999999999986543222 22456778888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++++.+...+++++||+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl  125 (284)
T cd07839          57 KHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDL  125 (284)
T ss_pred             CCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            99999999999999999999999996 578887764 456999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.86  E-value=9.5e-21  Score=140.23  Aligned_cols=125  Identities=19%  Similarity=0.338  Sum_probs=105.1

Q ss_pred             cceEEEeeecccceeEEEEEEEe----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESR----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +.|++.+.||.|+||.||+|...    ..+..+++|.+...........+.+|+.+++.                     
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~---------------------   63 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE---------------------   63 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhh---------------------
Confidence            57899999999999999999864    34578999988643322223567788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHH
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----------------SYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~~~qi~~~l~~L  167 (177)
                         +.||||+++++.+......|++|||+++++|.+++....                 .+++..+..++.|++.||+||
T Consensus        64 ---l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l  140 (283)
T cd05090          64 ---LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL  140 (283)
T ss_pred             ---CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence               899999999999999999999999999999999885322                 367888899999999999999


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |++|++||||
T Consensus       141 H~~~i~H~dl  150 (283)
T cd05090         141 SSHFFVHKDL  150 (283)
T ss_pred             HhcCeehhcc
Confidence            9999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.86  E-value=1.4e-20  Score=139.90  Aligned_cols=129  Identities=23%  Similarity=0.389  Sum_probs=107.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....++|.+.+.||.|+||.||++.+...     ...+++|.+...........+.+|+.++..                
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~----------------   71 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKM----------------   71 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHh----------------
Confidence            34456899999999999999999998644     378999988643222222456778888777                


Q ss_pred             CcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHH
Q psy13106        100 SNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLE  162 (177)
Q Consensus       100 ~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~  162 (177)
                              + +|+||+++++.+..+..++++|||+++++|.+++...                ..+++..+..++.|++.
T Consensus        72 --------l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~  143 (293)
T cd05053          72 --------IGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVAR  143 (293)
T ss_pred             --------hcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH
Confidence                    6 7999999999999889999999999999999998642                34788999999999999


Q ss_pred             HHHHHHhCCccccCC
Q psy13106        163 AVDYMHEARYLSKPR  177 (177)
Q Consensus       163 ~l~~LH~~giiH~Dl  177 (177)
                      ||+|||++||+||||
T Consensus       144 al~~LH~~~ivH~dl  158 (293)
T cd05053         144 GMEFLASKKCIHRDL  158 (293)
T ss_pred             HHHHHHHCCcccccc
Confidence            999999999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.86  E-value=2.6e-20  Score=138.28  Aligned_cols=127  Identities=24%  Similarity=0.365  Sum_probs=101.8

Q ss_pred             cceEEEeeecccceeEEEEEEEec-CCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||.|+||.||+|.+.. +++.+|+|.+....... ......+|+.+++.+..                    
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--------------------   60 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--------------------   60 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc--------------------
Confidence            379999999999999999999864 46889999986543222 22345567777766432                    


Q ss_pred             cCCCCCceeeEEEEe-----cCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFE-----DKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.     ....++++||+++ ++|.+++...  ..+++..+..++.||+.||.|||++||+||||
T Consensus        61 -~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl  136 (290)
T cd07862          61 -FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL  136 (290)
T ss_pred             -cCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence             57999999999875     3456899999995 5898888653  34889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.86  E-value=1.1e-20  Score=139.85  Aligned_cols=124  Identities=26%  Similarity=0.427  Sum_probs=103.7

Q ss_pred             cce-EEEeeecccceeEEEEEEE----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKY-ILKELLGTGAFSEVRLAES----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y-~~~~~lg~g~~g~v~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ++| ++.+.||.|+||.||++..    ..+++.+|+|.+...........+.+|+.+++.                    
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~--------------------   62 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKT--------------------   62 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHh--------------------
Confidence            455 8999999999999987653    346788999998654322233566788888888                    


Q ss_pred             ccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|||++++++++..  ...++++|||+++++|.+++... .+++..+..++.|++.||.|||++||+||||
T Consensus        63 ----l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dl  133 (283)
T cd05080          63 ----LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDL  133 (283)
T ss_pred             ----CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence                899999999998764  35689999999999999998764 4999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0574|consensus

Probab=99.86  E-value=6.5e-23  Score=148.37  Aligned_cols=125  Identities=21%  Similarity=0.423  Sum_probs=112.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+-|.++++||.|+||.||++.++.+|+.+|||.++-.   ..-+++..|+.++++                      
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQ----------------------   84 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQ----------------------   84 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHH----------------------
Confidence            3445689999999999999999999999999999987532   344778889999998                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++.++++++|+.+..+..+|+|||||..|+..++++ ++++++++++..++..-+.||+|||...-|||||
T Consensus        85 --C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDI  155 (502)
T KOG0574|consen   85 --CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDI  155 (502)
T ss_pred             --cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence              899999999999999999999999999999999887 5567999999999999999999999999999997

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.86  E-value=1.3e-20  Score=142.82  Aligned_cols=131  Identities=22%  Similarity=0.354  Sum_probs=107.3

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecC-------CcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESREN-------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      .......+|++.+.||.|+||.||+|.+...       ...+++|.+...........+.+|+.++..            
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------   73 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKM------------   73 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHh------------
Confidence            3445556899999999999999999987532       236899987643322233567788888887            


Q ss_pred             ccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHH
Q psy13106         96 NDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIR  158 (177)
Q Consensus        96 ~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~  158 (177)
                                  + +|+||+++++.+...+.++++|||+++++|.+++....                .++...+..++.
T Consensus        74 ------------l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  141 (334)
T cd05100          74 ------------IGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAY  141 (334)
T ss_pred             ------------hcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence                        6 79999999999998899999999999999999987532                367788889999


Q ss_pred             HHHHHHHHHHhCCccccCC
Q psy13106        159 QVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       159 qi~~~l~~LH~~giiH~Dl  177 (177)
                      |++.||.|||++||+||||
T Consensus       142 qi~~al~~LH~~givH~dl  160 (334)
T cd05100         142 QVARGMEYLASQKCIHRDL  160 (334)
T ss_pred             HHHHHHHHHHHCCeecccc
Confidence            9999999999999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.86  E-value=1.6e-20  Score=137.25  Aligned_cols=122  Identities=25%  Similarity=0.450  Sum_probs=105.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+.+.||.|+||.||++.+.. +..+|+|.+....  .....+.+|+.++..                        +
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~--~~~~~~~~e~~~l~~------------------------l   56 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS--MSEDEFIEEAKVMMK------------------------L   56 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc--ccHHHHHHHHHHHhc------------------------C
Confidence            479999999999999999998754 4569999875432  223567788888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+...++++|||+.+++|.+++.... .+++..+..++.||+.||+|||+.|++|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05113          57 SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL  126 (256)
T ss_pred             CCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            99999999999998889999999999999999987643 5899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.86  E-value=3.8e-20  Score=138.12  Aligned_cols=125  Identities=29%  Similarity=0.482  Sum_probs=110.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ...+|++.+.||.|++|.||++.+..+++.+++|.+..... .....+..|+.+++.                       
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~-----------------------   72 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKE-----------------------   72 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHh-----------------------
Confidence            34579999999999999999999999999999999864432 223566778888887                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       +.|+|++++++.+...+.+|++|||+++++|..++... .+++..+..++.|++.||+|||++|++|+||
T Consensus        73 -l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL  141 (296)
T cd06655          73 -LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDI  141 (296)
T ss_pred             -cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence             89999999999999999999999999999999988654 5899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.86  E-value=1.5e-20  Score=139.16  Aligned_cols=125  Identities=29%  Similarity=0.422  Sum_probs=109.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|++|.||+|.+..+++.+++|.+....... ....+..|+.+++.                        
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~------------------------   56 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQ------------------------   56 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHh------------------------
Confidence            36999999999999999999999999999999986543222 23567889999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|+|++++.+.+..++..+++|||++++.+..+......+++..+..++.||+.||.|||++|++|+||
T Consensus        57 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  126 (288)
T cd07833          57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDI  126 (288)
T ss_pred             cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            8899999999999999999999999988777666666666999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.86  E-value=8.8e-21  Score=140.27  Aligned_cols=126  Identities=22%  Similarity=0.361  Sum_probs=107.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC-----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG-----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .++|.+.+.||.|+||.||+|.....+     ..+++|.+...........+.+|+.++..                   
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~-------------------   64 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSD-------------------   64 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHh-------------------
Confidence            347999999999999999999976554     67999987644322233557788888887                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~  166 (177)
                           ++||||+++++++......|++|||+++++|.+++...                ..++...+..++.|++.||.|
T Consensus        65 -----l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~  139 (283)
T cd05048          65 -----LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEY  139 (283)
T ss_pred             -----cCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence                 88999999999999888999999999999999998754                347888999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||++|++|+||
T Consensus       140 lH~~~i~H~dl  150 (283)
T cd05048         140 LSSHHFVHRDL  150 (283)
T ss_pred             HHhCCeecccc
Confidence            99999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.5e-20  Score=138.93  Aligned_cols=125  Identities=21%  Similarity=0.325  Sum_probs=106.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .++|++.+.||.|+||.||+|.+..+++    .+++|.+...........+.+|+.++..                    
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~--------------------   65 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMAS--------------------   65 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHh--------------------
Confidence            4589999999999999999999876654    5888887544322233566778888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+|++++++++.. ...+++|||+++++|.+++..+ ..+++..+..++.|++.||+|||++||+|+||
T Consensus        66 ----l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di  135 (279)
T cd05057          66 ----VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDL  135 (279)
T ss_pred             ----CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEeccc
Confidence                889999999998876 7889999999999999998764 45899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=2e-20  Score=136.88  Aligned_cols=124  Identities=22%  Similarity=0.349  Sum_probs=107.8

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|.+.+.||.|++|.||+|.+.. ++.+++|.+.....  ....+.+|+.++..                       
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-----------------------   57 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTM--DPKDFLAEAQIMKK-----------------------   57 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcc--cHHHHHHHHHHHHH-----------------------
Confidence            34679999999999999999998754 56799999854321  23557788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+|++++++++...+.++++||++++++|.+++....  .++...+..++.|++.||.|||+.||+|+||
T Consensus        58 -l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  129 (261)
T cd05068          58 -LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDL  129 (261)
T ss_pred             -CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence             889999999999999999999999999999999987654  5899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.86  E-value=1.9e-20  Score=137.22  Aligned_cols=124  Identities=22%  Similarity=0.385  Sum_probs=108.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|.+.+.||.|+||.||+|.+..+++.+++|.+....  .....+.+|+.++..                        
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~------------------------   58 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKE------------------------   58 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHh------------------------
Confidence            456999999999999999999999999999999875332  123457788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+.....++++|||+++++|.+++....  .++...+..++.|++.||+|||++|++||||
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  130 (263)
T cd05052          59 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL  130 (263)
T ss_pred             CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence            889999999999998899999999999999999987543  4889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=3.7e-20  Score=137.44  Aligned_cols=125  Identities=24%  Similarity=0.365  Sum_probs=106.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|...+.||.|++|.||++.+..+++.+++|.+...........+.+|+.+++.                        +
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS------------------------C   56 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh------------------------C
Confidence            3688999999999999999999999999999998654332334567888888888                        8


Q ss_pred             CCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++.+.+  .+.++++|||+++++|.+++..    ...+++..+..++.||+.||.|||+.|++|+||
T Consensus        57 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl  131 (287)
T cd06621          57 KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDI  131 (287)
T ss_pred             CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            99999999998854  3478999999999999887653    245889999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.86  E-value=7e-21  Score=139.63  Aligned_cols=125  Identities=26%  Similarity=0.409  Sum_probs=108.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.||.|++|.||++.+..+++.++||.+.......  ....+..|+.+++.                       
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   58 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-----------------------   58 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHH-----------------------
Confidence            46888999999999999999999899999999876433221  22456778888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+|++++++.+.+++..+++||++++++|.+++..    ...+++..+..++.||+.||.|||++|++|+||
T Consensus        59 -~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  132 (267)
T cd08229          59 -LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDI  132 (267)
T ss_pred             -ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence             8899999999999999999999999999999998763    345899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.85  E-value=1.1e-20  Score=140.09  Aligned_cols=125  Identities=24%  Similarity=0.356  Sum_probs=105.9

Q ss_pred             cceEEEeeecccceeEEEEEEE----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAES----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..|++.+.||+|+||.||++..    ..++..+++|.+...........+.+|+.+++.                     
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~---------------------   62 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN---------------------   62 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHh---------------------
Confidence            3578999999999999999974    356789999998644323333567888888888                     


Q ss_pred             cccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|+|++++.+++...  ...+++|||+++++|.+++.+.. .++...+..++.|++.||+|||++||+||||
T Consensus        63 ---l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dl  135 (284)
T cd05079          63 ---LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL  135 (284)
T ss_pred             ---CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence               8999999999988764  67899999999999999987653 5899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.85  E-value=1.6e-20  Score=140.49  Aligned_cols=130  Identities=22%  Similarity=0.376  Sum_probs=107.6

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .....++|.+.+.||.|+||.||++.+..       .+..+++|.+...........+..|+.++..             
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~-------------   76 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM-------------   76 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHh-------------
Confidence            44566789999999999999999997532       3457999987543222233567788888887             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHH
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQ  159 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~q  159 (177)
                                 + +|+||+++++.+.....++++|||+++++|.+++...                ..++...+..++.|
T Consensus        77 -----------l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  145 (304)
T cd05101          77 -----------IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQ  145 (304)
T ss_pred             -----------hccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHH
Confidence                       5 7999999999999999999999999999999998753                23677888999999


Q ss_pred             HHHHHHHHHhCCccccCC
Q psy13106        160 VLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       160 i~~~l~~LH~~giiH~Dl  177 (177)
                      |+.||.|||++||+||||
T Consensus       146 i~~al~~LH~~givH~dl  163 (304)
T cd05101         146 VARGMEYLASQKCIHRDL  163 (304)
T ss_pred             HHHHHHHHHHCCeeeccc
Confidence            999999999999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.85  E-value=3.2e-20  Score=137.36  Aligned_cols=121  Identities=26%  Similarity=0.456  Sum_probs=99.9

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .||.|+||.||++.+..+++.+|+|.+.........  .....|..++.....                     .+|+++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~i   59 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---------------------GDCPFI   59 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh---------------------CCCCcE
Confidence            479999999999999999999999998654432221  222334333333211                     579999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.+++.+...+..+++|||+++++|.+++...+.+++..+..++.|++.||+|||+.||+||||
T Consensus        60 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~di  123 (279)
T cd05633          60 VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDL  123 (279)
T ss_pred             eEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCC
Confidence            9999999988999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0662|consensus

Probab=99.85  E-value=1.1e-21  Score=132.65  Aligned_cols=123  Identities=26%  Similarity=0.368  Sum_probs=108.8

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .|.-.++||.|+||+||+++.+.+.+.||+|.+...... +-.....+|+.+++.                        +
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllke------------------------l   58 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE------------------------L   58 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHH------------------------h
Confidence            466678999999999999999999999999998765432 234678899999999                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|.||+++++.....+.+-+|+||| ..+|..+..+ ++-++...++.++.|++.||.|+|+++++||||
T Consensus        59 khknivrl~dvlhsdkkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdl  127 (292)
T KOG0662|consen   59 KHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDL  127 (292)
T ss_pred             hhcceeehhhhhccCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccC
Confidence            9999999999999999999999999 4589888865 466999999999999999999999999999997

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.85  E-value=1.8e-21  Score=143.63  Aligned_cols=125  Identities=26%  Similarity=0.500  Sum_probs=109.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|...+.||.|+||.||+|.+..+++.+++|.+...........+..|+.++..                        
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~------------------------   58 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ------------------------   58 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHc------------------------
Confidence            34677888999999999999999988999999998644333333567788888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+..++..|++|||+++++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl  127 (277)
T cd06642          59 CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDI  127 (277)
T ss_pred             CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence            8999999999999999999999999999999998765 45899999999999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.85  E-value=3.6e-20  Score=135.09  Aligned_cols=124  Identities=27%  Similarity=0.550  Sum_probs=106.0

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .|.+.+.||.|++|.||.+.+..+++.+++|.+....... ....+..|+.+++.                        +
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQ------------------------L   56 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHh------------------------C
Confidence            4899999999999999999999889999999986543222 22456778888877                        8


Q ss_pred             CCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++.+.+.. ...+|++||++++++|.+++...  ..+++..+..++.|++.|++|||++||+|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di  128 (257)
T cd08223          57 KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDL  128 (257)
T ss_pred             CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            89999999988764 45789999999999999988753  35899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.85  E-value=1.3e-20  Score=140.54  Aligned_cols=125  Identities=23%  Similarity=0.464  Sum_probs=104.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCc--EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGT--MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|++.+.||.|+||.||+|....++.  .+++|.+...........+..|+.++.+                       
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~-----------------------   58 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCK-----------------------   58 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHh-----------------------
Confidence            479999999999999999999876654  4688776532212223456778888877                       


Q ss_pred             cC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        107 RL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       107 ~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                       + +||||+++++++.+...+|++|||+++++|.+++....                .++...+..++.|++.||+|||+
T Consensus        59 -l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~  137 (297)
T cd05089          59 -LGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE  137 (297)
T ss_pred             -hcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence             5 69999999999998899999999999999999986532                37889999999999999999999


Q ss_pred             CCccccCC
Q psy13106        170 ARYLSKPR  177 (177)
Q Consensus       170 ~giiH~Dl  177 (177)
                      +||+||||
T Consensus       138 ~~ivH~dl  145 (297)
T cd05089         138 KQFIHRDL  145 (297)
T ss_pred             CCcccCcC
Confidence            99999997

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.85  E-value=7.9e-21  Score=140.01  Aligned_cols=125  Identities=34%  Similarity=0.602  Sum_probs=110.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++|.+.+.||+|++|.||++....+++.+++|++.......  ....+..|..++..                       
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~-----------------------   57 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTR-----------------------   57 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHh-----------------------
Confidence            36999999999999999999999999999999986543221  22456677777777                       


Q ss_pred             cCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       +. |+||+++++.+...+..+++||++.+++|.+++...+.++...+..++.|++.||.|||+.|++|+||
T Consensus        58 -l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl  128 (280)
T cd05581          58 -LNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDL  128 (280)
T ss_pred             -cccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence             66 99999999999999999999999999999999988878999999999999999999999999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.85  E-value=2.8e-20  Score=137.35  Aligned_cols=117  Identities=34%  Similarity=0.538  Sum_probs=102.3

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||+||+|.+..+++.+++|.+........  ...+..|+.+++.                        ++|||++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~~~~i~   56 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEK------------------------VSSRFIV   56 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHh------------------------CCCCCEe
Confidence            6899999999999999999999999875432221  2344678888887                        8899999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+...+.+|++|||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di  121 (277)
T cd05577          57 SLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL  121 (277)
T ss_pred             eeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999999999999987655  6899999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0584|consensus

Probab=99.85  E-value=1.6e-21  Score=151.91  Aligned_cols=131  Identities=24%  Similarity=0.409  Sum_probs=112.5

Q ss_pred             cCcccccce-EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc---hhHHHHHHHHHhhcccccccccccccC
Q psy13106         23 KGPSIEEKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE---DSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        23 ~~~~~~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ......++| +..+.||+|+|.+||+|.+..++-.||-..++........   +++..|+++++.               
T Consensus        33 ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKs---------------   97 (632)
T KOG0584|consen   33 VEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKS---------------   97 (632)
T ss_pred             cccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHcc---------------
Confidence            334445555 5677899999999999999999998887776655443332   577889999999               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCC--eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR--YLS  174 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH  174 (177)
                               |+|+||+++|++|.+..  .+-+++|.+..|+|.+|.++.+.++.+.++.|.+||+.||.|||++.  |||
T Consensus        98 ---------L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIH  168 (632)
T KOG0584|consen   98 ---------LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIH  168 (632)
T ss_pred             ---------CCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccc
Confidence                     99999999999998654  48899999999999999999999999999999999999999999997  999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       169 RDL  171 (632)
T KOG0584|consen  169 RDL  171 (632)
T ss_pred             ccc
Confidence            997

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.1e-20  Score=139.54  Aligned_cols=117  Identities=15%  Similarity=0.167  Sum_probs=95.7

Q ss_pred             eecccceeEEEEEEEecC------------------------CcEEEEEEEecccccccchhHHHHHHHHHhhccccccc
Q psy13106         36 LLGTGAFSEVRLAESREN------------------------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR   91 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~------------------------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~   91 (177)
                      +||+|+||.||+|....+                        ...+++|.+..... .....+..|+.+++.        
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~--------   72 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQ--------   72 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhc--------
Confidence            689999999999985422                        23588888754321 122345566666666        


Q ss_pred             ccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106         92 LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                                      ++||||+++++++.++...++||||+++++|..++.. .+.+++..+..++.||+.||+|||++
T Consensus        73 ----------------l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  136 (274)
T cd05076          73 ----------------VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK  136 (274)
T ss_pred             ----------------CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence                            8999999999999999999999999999999988865 45689999999999999999999999


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       137 ~iiH~dl  143 (274)
T cd05076         137 NLVHGNV  143 (274)
T ss_pred             CccCCCC
Confidence            9999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.85  E-value=7e-21  Score=140.54  Aligned_cols=126  Identities=23%  Similarity=0.382  Sum_probs=108.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+.|.+.+.||.|+||.||+|....     ++..+++|.+...........+.+|+.++..                   
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-------------------   64 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN-------------------   64 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHh-------------------
Confidence            3468999999999999999998753     3578999998654332234567889988888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--------------SYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                           +.|+|++++++.+......+++|||+++++|.+++...+              .+++..+..++.|++.|+.|||
T Consensus        65 -----l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  139 (280)
T cd05049          65 -----FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA  139 (280)
T ss_pred             -----cCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence                 889999999999999999999999999999999987542              3788899999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++|++||||
T Consensus       140 ~~~i~h~dl  148 (280)
T cd05049         140 SQHFVHRDL  148 (280)
T ss_pred             hCCeecccc
Confidence            999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.85  E-value=3.1e-20  Score=137.93  Aligned_cols=124  Identities=23%  Similarity=0.516  Sum_probs=107.3

Q ss_pred             ceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .|++.+.||.|+||.||.+.+.   .++..+|+|.+......   .....+..|+.++..                    
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~--------------------   60 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH--------------------   60 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHh--------------------
Confidence            3789999999999999999875   36889999998653221   122456778888887                    


Q ss_pred             ccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          + +|+||+.+++.+..+..++++|||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||
T Consensus        61 ----l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl  131 (290)
T cd05613          61 ----IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDI  131 (290)
T ss_pred             ----cccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence                5 699999999999999999999999999999999988888999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=4.1e-20  Score=135.13  Aligned_cols=125  Identities=22%  Similarity=0.402  Sum_probs=108.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.+.+.||.|+||.||++... .+..+++|.+.....  ....+.+|+.+++.                      
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~----------------------   57 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM--SPEAFLQEAQIMKK----------------------   57 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc--CHHHHHHHHHHHhh----------------------
Confidence            44568999999999999999999876 457799998864332  33567888888888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+......+++||++++++|.+++....  .++...+..++.|++.|+.|||++|++|+||
T Consensus        58 --l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di  129 (261)
T cd05034          58 --LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDL  129 (261)
T ss_pred             --CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence              899999999999998889999999999999999987643  5889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=2.8e-20  Score=135.71  Aligned_cols=122  Identities=26%  Similarity=0.461  Sum_probs=108.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|.+.+.||.|+||.||+|...  ++.+++|.+.....  ....+.+|+.++..                        
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~--~~~~~~~e~~~l~~------------------------   56 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST--AAQAFLAEASVMTT------------------------   56 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh--HHHHHHHHHHHHHh------------------------
Confidence            457999999999999999999865  78899999864432  34567788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+.+....+++||++++++|.+++....  .+++..+..++.|++.||.|||++|++|+||
T Consensus        57 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di  128 (256)
T cd05039          57 LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDL  128 (256)
T ss_pred             cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhc
Confidence            889999999999988889999999999999999997665  6899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.85  E-value=2.5e-20  Score=136.82  Aligned_cols=126  Identities=16%  Similarity=0.339  Sum_probs=107.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...|+..+.||.|+||.||+|....+++   .+++|.+...........+..|+.++..                     
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~---------------------   62 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQ---------------------   62 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhc---------------------
Confidence            4478999999999999999999876554   7899987544322233556778888877                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|+|++++.+++...+..+++||++++++|.+++... +.++...+..++.|++.||+|||+.|++|+||
T Consensus        63 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl  133 (268)
T cd05063          63 ---FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDL  133 (268)
T ss_pred             ---CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence               88999999999999999999999999999999998754 46899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.85  E-value=4.5e-20  Score=135.45  Aligned_cols=124  Identities=29%  Similarity=0.460  Sum_probs=107.5

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .|.+.+.||.|+||.||++.+..++..+++|.+.......    ....+.+|+.+++.                      
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~----------------------   60 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKN----------------------   60 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHH----------------------
Confidence            5888999999999999999999999999999886432211    12356778888888                      


Q ss_pred             ccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+||+++++.+.+  ...++++||++++++|.+++.....++......++.|++.||+|||++||+|+||
T Consensus        61 --l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l  132 (266)
T cd06651          61 --LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDI  132 (266)
T ss_pred             --cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence              889999999998865  4678999999999999999988777999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2e-20  Score=137.99  Aligned_cols=126  Identities=25%  Similarity=0.450  Sum_probs=108.4

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+.+.||.|+||.||+|.+..+++.+++|.+...........+.+|+.+++.+..                     ..
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---------------------~~   60 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---------------------SQ   60 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---------------------CC
Confidence            477889999999999999999999999999998654333334567788888887322                     35


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+......|++|||+++++|.+++... .+++..+..++.|++.||.|||+.||+|+||
T Consensus        61 ~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl  127 (277)
T cd06917          61 PPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDI  127 (277)
T ss_pred             CCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            999999999999999999999999999999988654 6899999999999999999999999999997

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG4279|consensus

Probab=99.85  E-value=2.2e-21  Score=153.36  Aligned_cols=117  Identities=26%  Similarity=0.433  Sum_probs=105.0

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCcee
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQ  115 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~  115 (177)
                      .||.|+||+||-|++..++...|||.|+.+.. ...+.+..|+.+.+.                        +.|.||++
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~------------------------LrHkNIVr  636 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHST------------------------LRHKNIVR  636 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHH------------------------HhhHhHHH
Confidence            59999999999999999999999999975542 234667778888777                        89999999


Q ss_pred             eEEEEecCCeEEEEEeccCCcchhHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        116 LIETFEDKHKVYLVMELVTGGELFDRIVE-KGSY--TEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       116 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~--~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.+++.+++++-+.||-++||+|.+++.+ .+++  ++..+-.+.+||++||.|||++.||||||
T Consensus       637 YLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDI  701 (1226)
T KOG4279|consen  637 YLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDI  701 (1226)
T ss_pred             HhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccc
Confidence            99999999999999999999999999974 4777  79999999999999999999999999997

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.85  E-value=2.8e-20  Score=136.19  Aligned_cols=117  Identities=31%  Similarity=0.582  Sum_probs=104.3

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|++|.||++.+..+++.+++|.+.......  ....+..|+.+++.                        ++|+||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~~i~   56 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEE------------------------CNHPFIV   56 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHh------------------------CCCCCEe
Confidence            689999999999999999999999987543321  22557778888887                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+.+++.++++|||+++++|.+++.....+++..+..++.||+.||+|||++|++|+||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl  119 (262)
T cd05572          57 KLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL  119 (262)
T ss_pred             eeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            999999999999999999999999999988777999999999999999999999999999997

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.85  E-value=9.9e-21  Score=138.62  Aligned_cols=124  Identities=23%  Similarity=0.359  Sum_probs=110.3

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+.+.||.|++|.||++.+..+++.+++|.+...........+.+|+.+++.                        +.
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~------------------------~~   57 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK------------------------CN   57 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHH------------------------CC
Confidence            578889999999999999999999999999998655433334567788888887                        78


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      ||||+++++.+...+.++++||++++++|.+++... ..+++..+..++.|++.||+|||+ .|++|+||
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl  127 (265)
T cd06605          58 SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDV  127 (265)
T ss_pred             CCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCC
Confidence            999999999999999999999999989999998765 679999999999999999999999 99999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.85  E-value=2.7e-20  Score=137.57  Aligned_cols=125  Identities=22%  Similarity=0.313  Sum_probs=104.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+|++.+.||.|+||.||+|.+..+++    .||+|.+...........+..|..++..                    
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~--------------------   65 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG--------------------   65 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHh--------------------
Confidence            4579999999999999999999876665    4899987544322233556777777777                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+|++.+++.+.. ...+++|+++++|+|.+++... +.+++..+..++.|++.||+|||++||+||||
T Consensus        66 ----~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dl  135 (279)
T cd05109          66 ----VGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDL  135 (279)
T ss_pred             ----cCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence                789999999998864 4578999999999999998764 45899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.85  E-value=2.6e-20  Score=139.99  Aligned_cols=129  Identities=22%  Similarity=0.372  Sum_probs=106.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ....++|.+.+.||.|+||.||++.+..       ....+++|.+...........+..|+.++..              
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~--------------   73 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKL--------------   73 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHh--------------
Confidence            3445689999999999999999998642       3457899987643322223456778888877              


Q ss_pred             CCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHH
Q psy13106         98 NNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQV  160 (177)
Q Consensus        98 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi  160 (177)
                                + +||||+++++++.....+|++|||+++++|.+++...                ..++...+..++.||
T Consensus        74 ----------l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (314)
T cd05099          74 ----------IGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQV  143 (314)
T ss_pred             ----------ccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHH
Confidence                      5 6999999999999888999999999999999998653                237888899999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||.|||++||+||||
T Consensus       144 ~~aL~~lH~~gi~H~dl  160 (314)
T cd05099         144 ARGMEYLESRRCIHRDL  160 (314)
T ss_pred             HHHHHHHHHCCeeeccc
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.85  E-value=4e-20  Score=136.95  Aligned_cols=127  Identities=24%  Similarity=0.466  Sum_probs=106.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||+|+||.||++.+..+++.+++|++....  .....+.+|+.++..                     
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~---------------------   70 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKA---------------------   70 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHH---------------------
Confidence            345668999999999999999999999999999999875322  223556778888877                     


Q ss_pred             cccC-CCCCceeeEEEEe-----cCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        105 KERL-THPNIVQLIETFE-----DKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       105 ~~~~-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                         + +|+|++++++.+.     ..+.++++|||+++++|.+++..    ...+++..+..++.|++.||.|||+.+|+|
T Consensus        71 ---l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  147 (286)
T cd06638          71 ---LSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIH  147 (286)
T ss_pred             ---HhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccc
Confidence               5 6999999999873     34679999999999999987652    245889999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       148 ~dl  150 (286)
T cd06638         148 RDV  150 (286)
T ss_pred             cCC
Confidence            997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.85  E-value=2.2e-20  Score=136.13  Aligned_cols=119  Identities=27%  Similarity=0.521  Sum_probs=105.3

Q ss_pred             eeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+...   +..+++|.+...........+..|+.++..                        ++|+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~------------------------~~~~   56 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKK------------------------LGHP   56 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhh------------------------cCCC
Confidence            4689999999999999866   889999998755433334667788888888                        7899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |++++++++.....++++|||+++++|.+++...         ..+++..+..++.|++.||.|||++||+|+||
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di  131 (262)
T cd00192          57 NVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDL  131 (262)
T ss_pred             ChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCcc
Confidence            9999999999999999999999999999999875         67999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.85  E-value=2.1e-20  Score=138.07  Aligned_cols=126  Identities=26%  Similarity=0.436  Sum_probs=107.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEe----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESR----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .++|++.+.||.|+||.||++...    .++..+|+|.+...........+..|+.+++.                    
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~--------------------   62 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRT--------------------   62 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHh--------------------
Confidence            357888999999999999999864    34789999998654432124567888888888                    


Q ss_pred             ccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          +.|+||+++++++..  ....+++|||+++++|.+++.... .++...+..++.|++.||+|||++|++|+||
T Consensus        63 ----l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl  135 (284)
T cd05038          63 ----LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDL  135 (284)
T ss_pred             ----CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                889999999998876  567999999999999999997654 5899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.85  E-value=2.3e-20  Score=136.31  Aligned_cols=121  Identities=27%  Similarity=0.475  Sum_probs=105.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      +|++.+.||.|+||.||++.+. ++..+++|.+.....  ....+..|+.+++.                        ++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~------------------------l~   57 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM--SEDDFIEEAKVMMK------------------------LS   57 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC--CHHHHHHHHHHHHh------------------------CC
Confidence            5889999999999999999876 466899998754321  23456778888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+||+++++++...+..+++||++++++|.+++..+ ..+++..+..++.|++.||.|||+.||+||||
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  126 (256)
T cd05059          58 HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDL  126 (256)
T ss_pred             CCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            999999999999999999999999999999998754 45889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.85  E-value=8.4e-21  Score=144.13  Aligned_cols=129  Identities=22%  Similarity=0.301  Sum_probs=104.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....++|++.+.||.|+||.||+|.+..     +++.||+|.+...........+..|+.++..                
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~----------------   66 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIH----------------   66 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHh----------------
Confidence            3455689999999999999999997543     3578999988643322223456678888877                


Q ss_pred             CcccccccC-CCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc--------------------------------
Q psy13106        100 SNDKDKERL-THPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK--------------------------------  145 (177)
Q Consensus       100 ~~~~~~~~~-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--------------------------------  145 (177)
                              + +|+||+++++++.. ...++++|||+++++|.+++...                                
T Consensus        67 --------l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (337)
T cd05054          67 --------IGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSS  138 (337)
T ss_pred             --------hccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCc
Confidence                    5 79999999998764 46789999999999999988542                                


Q ss_pred             -----------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        146 -----------------------------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       146 -----------------------------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                   ..++...+..++.||+.||+|||++||+||||
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDi  199 (337)
T cd05054         139 SQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDL  199 (337)
T ss_pred             cccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                                         24788889999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=1.4e-20  Score=140.25  Aligned_cols=126  Identities=23%  Similarity=0.448  Sum_probs=105.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEec----------------CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE----------------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR   91 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~   91 (177)
                      .++|++.+.||.|+||.||++.+..                +...+|+|.+...........+..|+.+++.        
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~--------   75 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSR--------   75 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh--------
Confidence            4579999999999999999986542                2446899988644322233567788888888        


Q ss_pred             ccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----------CCCHHHHHHHHHHH
Q psy13106         92 LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----------SYTEKDASMLIRQV  160 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi  160 (177)
                                      ++|+||+++++++......+++||++++++|.+++....           .++...+..++.|+
T Consensus        76 ----------------l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  139 (296)
T cd05095          76 ----------------LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQI  139 (296)
T ss_pred             ----------------CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHH
Confidence                            899999999999999999999999999999999887543           25677899999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+|||+.|++|+||
T Consensus       140 ~~al~~lH~~~i~H~dl  156 (296)
T cd05095         140 ASGMKYLSSLNFVHRDL  156 (296)
T ss_pred             HHHHHHHHHCCeecccC
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.85  E-value=3.2e-20  Score=137.45  Aligned_cols=124  Identities=24%  Similarity=0.412  Sum_probs=104.6

Q ss_pred             cceEEEeeecccceeEEEEEEE----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAES----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+|++.+.||.|+||.||++..    ..++..+++|.+..... .....+.+|+.++..                     
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~---------------------   61 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-EHLRDFEREIEILKS---------------------   61 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-HHHHHHHHHHHHHHh---------------------
Confidence            4799999999999999999974    45688999999754321 223567788888888                     


Q ss_pred             cccCCCCCceeeEEEEe--cCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFE--DKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|||++++.+++.  +...++++|||+++++|.+++... ..++...+..++.|++.||+|||++||+||||
T Consensus        62 ---l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dl  134 (284)
T cd05081          62 ---LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDL  134 (284)
T ss_pred             ---CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence               89999999998764  345789999999999999998754 45899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.85  E-value=3.5e-20  Score=138.08  Aligned_cols=127  Identities=28%  Similarity=0.454  Sum_probs=109.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +...++|.+.+.||+|+||.||++.+..++..+++|.+..... .....+..|+.+++.                     
T Consensus        15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~---------------------   72 (293)
T cd06647          15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRE---------------------   72 (293)
T ss_pred             cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhh---------------------
Confidence            3345789999999999999999999988899999999854321 223556778888877                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|||++++++.+...+..|+++||+++++|.+++.+. .++...+..++.|++.||.|||++|++|+||
T Consensus        73 ---l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL  141 (293)
T cd06647          73 ---NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDI  141 (293)
T ss_pred             ---cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccC
Confidence               88999999999999999999999999999999988654 4889999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.85  E-value=4.5e-20  Score=136.42  Aligned_cols=125  Identities=19%  Similarity=0.270  Sum_probs=102.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+.+.||.|+||.||++.+..+++.||+|.+...........+..|..+..+.                       .
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----------------------~   57 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----------------------V   57 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----------------------c
Confidence            36899999999999999999999999999999986543222233444555543221                       6


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                      +|||++++++++..++.+|++|||++ ++|.+++..    ...+++..+..++.||+.||+|||++ +++||||
T Consensus        58 ~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl  130 (283)
T cd06617          58 DCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV  130 (283)
T ss_pred             CCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence            89999999999999999999999996 578777653    23589999999999999999999997 9999997

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.85  E-value=7.8e-21  Score=144.46  Aligned_cols=126  Identities=24%  Similarity=0.419  Sum_probs=105.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   70 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH---------------------   70 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHh---------------------
Confidence            34578999999999999999999999999999999986432211 22446678888888                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++++...      ...|++|+++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||
T Consensus        71 ---l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdi  144 (343)
T cd07878          71 ---MKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDL  144 (343)
T ss_pred             ---cCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence               8999999999887532      4579999988 7789887754 45999999999999999999999999999997

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=4.9e-20  Score=135.35  Aligned_cols=125  Identities=28%  Similarity=0.533  Sum_probs=108.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|++|.||+|.+..+++.+++|++.....  ....+..|+.+++.                       
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~-----------------------   58 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRK-----------------------   58 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHH-----------------------
Confidence            45789999999999999999999998899999999865432  33567788888887                       


Q ss_pred             cC-CCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        107 RL-THPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       107 ~~-~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                       + +|+|++++++++.+..      .+|++|||+++++|.+++..    ...+++..+..++.|++.||.|||++|++|+
T Consensus        59 -~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~  137 (275)
T cd06608          59 -YSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHR  137 (275)
T ss_pred             -hcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence             5 7999999999997544      48999999999999988764    3468999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       138 ~l  139 (275)
T cd06608         138 DI  139 (275)
T ss_pred             CC
Confidence            97

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.85  E-value=7.9e-21  Score=138.93  Aligned_cols=124  Identities=24%  Similarity=0.399  Sum_probs=108.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|++.+.||.|+||.||+|.+.. +..+++|.+..... .....+..|+.+++.                        
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~------------------------   58 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL-LKQQDFQKEVQALKR------------------------   58 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch-hhHHHHHHHHHHHhc------------------------
Confidence            4469999999999999999999987 88999999865432 123567788888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++++.+....+++|||+++++|.+++...  ..++...+..++.||+.||.|||++||+|+||
T Consensus        59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl  130 (261)
T cd05148          59 LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDL  130 (261)
T ss_pred             CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            89999999999999999999999999999999999753  35889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG1290|consensus

Probab=99.85  E-value=3.6e-20  Score=141.00  Aligned_cols=146  Identities=25%  Similarity=0.377  Sum_probs=118.8

Q ss_pred             hccCCCCCcccCcccc-cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhccccccc
Q psy13106         13 LKKDGKDNEIKGPSIE-EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR   91 (177)
Q Consensus        13 ~~~~~~~~~~~~~~~~-~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~   91 (177)
                      ..+.+......++.+. ++|.+.++||.|-|++||+|++..+.+.||+|+++..  ....+....|+.+++.+...=.  
T Consensus        61 Y~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp--  136 (590)
T KOG1290|consen   61 YRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDP--  136 (590)
T ss_pred             hhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCC--
Confidence            4445566677788888 8999999999999999999999999999999998533  2344677889999998653210  


Q ss_pred             ccccccCCCcccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q psy13106         92 LDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVD  165 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~  165 (177)
                                    ...+-..|+++++.|..    ..++|+|+|++ |-+|..+|...  ..++...++.|++||+.||.
T Consensus       137 --------------~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLd  201 (590)
T KOG1290|consen  137 --------------NDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLD  201 (590)
T ss_pred             --------------CCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence                          01345579999999973    35899999999 77999988754  34999999999999999999


Q ss_pred             HHHh-CCccccCC
Q psy13106        166 YMHE-ARYLSKPR  177 (177)
Q Consensus       166 ~LH~-~giiH~Dl  177 (177)
                      |||. .||||.||
T Consensus       202 YLH~ecgIIHTDl  214 (590)
T KOG1290|consen  202 YLHRECGIIHTDL  214 (590)
T ss_pred             HHHHhcCccccCC
Confidence            9997 69999997

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=7.9e-20  Score=132.82  Aligned_cols=124  Identities=31%  Similarity=0.539  Sum_probs=110.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+..|+.++..                        +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKN------------------------L   56 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHh------------------------C
Confidence            488899999999999999999988999999998655332 123567788888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|+|++++.+++.+.+..+++||++++++|.+++.....+++..+..++.|++.||.|||++||+|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  125 (254)
T cd06627          57 KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDI  125 (254)
T ss_pred             CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            899999999999999999999999999999999988788999999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.85  E-value=3.5e-20  Score=134.97  Aligned_cols=123  Identities=24%  Similarity=0.444  Sum_probs=110.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|.+.+.||.|+||.||++.+..++..+++|.+.....   ...+.+|+.+++.                        
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~------------------------   54 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQ------------------------   54 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHh------------------------
Confidence            3579999999999999999999998899999999864432   4667888888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+.+...+|+++|++.+++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||
T Consensus        55 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl  125 (256)
T cd06612          55 CDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDI  125 (256)
T ss_pred             CCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            8999999999999999999999999999999999865 345899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.85  E-value=2.3e-20  Score=138.54  Aligned_cols=126  Identities=21%  Similarity=0.361  Sum_probs=106.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .++|.+.+.||.|+||.||++.+..     ++..+++|.+...........+.+|+.++..                   
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~-------------------   64 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE-------------------   64 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHh-------------------
Confidence            4579999999999999999998753     5788999998644322233557788888888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------------CCCHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------------SYTEKDASMLIRQV  160 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------------~~~~~~~~~~~~qi  160 (177)
                           ++|||++++++++......+++|||+++++|.+++....                      .+++..+..++.|+
T Consensus        65 -----l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i  139 (288)
T cd05050          65 -----FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQV  139 (288)
T ss_pred             -----cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHH
Confidence                 899999999999998889999999999999999986432                      36788889999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||.|||++|++||||
T Consensus       140 ~~aL~~lH~~~i~H~dl  156 (288)
T cd05050         140 AAGMAYLSERKFVHRDL  156 (288)
T ss_pred             HHHHHHHHhCCeecccc
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.85  E-value=2e-20  Score=138.39  Aligned_cols=124  Identities=31%  Similarity=0.545  Sum_probs=107.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|++.+.||.|+||.||++.+..++..+++|.+..... .....+.+|+.+++.                        +
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~------------------------l   59 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE-EELEDYMVEIDILAS------------------------C   59 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH-HHHHHHHHHHHHHHH------------------------C
Confidence            347888999999999999999999999999999854332 123456678888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+...+..|++|||+++++|..++.. ..++++..+..++.|++.||.|||+.|++||||
T Consensus        60 ~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  129 (282)
T cd06643          60 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDL  129 (282)
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            999999999999999999999999999999887754 456899999999999999999999999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.85  E-value=7.2e-20  Score=136.22  Aligned_cols=124  Identities=23%  Similarity=0.361  Sum_probs=106.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|.+|.||++.+..+++.+++|.+....... ....+..|+.+++.                        
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------   57 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKE------------------------   57 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHh------------------------
Confidence            47999999999999999999999999999999986543221 22456778888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++++...+..|++|||++ ++|.+.+.....  +++..+..++.||+.||+|||++|++|+||
T Consensus        58 l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl  128 (294)
T PLN00009         58 MQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDL  128 (294)
T ss_pred             ccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            899999999999999999999999995 588887765443  578889999999999999999999999997

>KOG1187|consensus

Probab=99.85  E-value=2.4e-20  Score=142.19  Aligned_cols=122  Identities=25%  Similarity=0.393  Sum_probs=104.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.-...||.|+||.||+|..... ..+|||.+....... ..++.+|+.++.+                        +.
T Consensus        76 ~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~------------------------l~  129 (361)
T KOG1187|consen   76 NFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG-EREFLNEVEILSR------------------------LR  129 (361)
T ss_pred             CCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc-hhHHHHHHHHHhc------------------------CC
Confidence            566667899999999999988754 899999765443221 4569999999998                        88


Q ss_pred             CCCceeeEEEEecCC-eEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccCC
Q psy13106        110 HPNIVQLIETFEDKH-KVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEAR---YLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~g---iiH~Dl  177 (177)
                      |+|++++++++.+.+ ..++|+||+++|+|.+.+....  +++...-..|+.+++.||+|||+..   ||||||
T Consensus       130 H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDi  203 (361)
T KOG1187|consen  130 HPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDI  203 (361)
T ss_pred             CcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCC
Confidence            999999999999888 5999999999999999987654  7888889999999999999999964   999997

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.85  E-value=4.9e-20  Score=134.28  Aligned_cols=124  Identities=23%  Similarity=0.514  Sum_probs=108.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||++.+..++..+++|.+....... ....+.+|+.+++.                        +
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~------------------------~   56 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK------------------------M   56 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh------------------------C
Confidence            4889999999999999999999999999999986543222 23456788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+.....+++++||+++++|.+++....  .+++..+..++.|++.||.|||+.+++|+||
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl  127 (257)
T cd08225          57 KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDI  127 (257)
T ss_pred             CCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            89999999999999999999999999999999887543  4789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.85  E-value=5.4e-20  Score=134.58  Aligned_cols=124  Identities=23%  Similarity=0.391  Sum_probs=106.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|++.++||.|++|.||+|... .+..+++|.+.....  ....+..|+.+++.                       
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-----------------------   57 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM--SVQAFLEEANLMKT-----------------------   57 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch--hHHHHHHHHHHHHh-----------------------
Confidence            3568999999999999999999865 456799998754321  23567788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+.+.+..+++||++++++|.+++...  ..++...+..++.|++.||+|||+.|++||||
T Consensus        58 -l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl  129 (261)
T cd05072          58 -LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL  129 (261)
T ss_pred             -CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence             89999999999999999999999999999999988653  45788899999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=3.2e-20  Score=141.97  Aligned_cols=117  Identities=19%  Similarity=0.322  Sum_probs=102.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ..|.+.+.||.|+||.||+|.+..+++.+++|+...       .....|+.+++.                        +
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------~~~~~E~~~l~~------------------------l  114 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------GTTLIEAMLLQN------------------------V  114 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------cccHHHHHHHHh------------------------C
Confidence            369999999999999999999999999999997422       223467888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++++++......+++|+++. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus       115 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  183 (357)
T PHA03209        115 NHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDV  183 (357)
T ss_pred             CCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999999999999999999999994 588888765 356899999999999999999999999999997

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.85  E-value=2.5e-20  Score=135.77  Aligned_cols=123  Identities=25%  Similarity=0.458  Sum_probs=107.0

Q ss_pred             eEEEeeecccceeEEEEEEEecCC----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENG----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.+.+.||.|+||.||++.+...+    ..+++|.+...........+..|+.++..                       
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRK-----------------------   57 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHh-----------------------
Confidence            356789999999999999998766    89999998544322234567788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+|++++++.+.+.+..+++||++++++|.+++.....  +++..+..++.|++.||+|||+.|++|+||
T Consensus        58 -l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl  129 (258)
T smart00219       58 -LDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDL  129 (258)
T ss_pred             -cCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeeccc
Confidence             8899999999999999999999999999999999876544  899999999999999999999999999997

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.85  E-value=8.1e-20  Score=132.86  Aligned_cols=124  Identities=31%  Similarity=0.595  Sum_probs=109.8

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|++|.||++.+..++..+++|.+...... .....+..|+++++.                        +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK------------------------L   56 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHh------------------------c
Confidence            588999999999999999999989999999998654432 223557788888888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++.+.+......+++||++++++|.+++...    ..++...+..++.|++.||.|||++|++|+||
T Consensus        57 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl  129 (258)
T cd08215          57 NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDI  129 (258)
T ss_pred             CCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence            8999999999999999999999999999999988764    56999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.84  E-value=2.4e-20  Score=140.97  Aligned_cols=119  Identities=20%  Similarity=0.334  Sum_probs=101.1

Q ss_pred             eeeccc--ceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTG--AFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g--~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      ..||.|  +||+||++.+..+++.||+|++....... ....+.+|+.+++.                        ++||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~------------------------l~h~   59 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHF------------------------FRHP   59 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHh------------------------CCCC
Confidence            456666  99999999999999999999986543222 22456677777766                        8999


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++++...+..+++||++.++++.+++....  .+++..+..++.|++.||+|||++||+||||
T Consensus        60 niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDl  127 (328)
T cd08226          60 NIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNI  127 (328)
T ss_pred             CcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999999999999999999999999887643  4889999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.84  E-value=6.9e-20  Score=135.50  Aligned_cols=121  Identities=26%  Similarity=0.438  Sum_probs=99.8

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .||.|+||.||++.+..+++.+|+|.+.........  .....|..++.....                     .+|+++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~i   59 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---------------------GDCPFI   59 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---------------------CCCCcE
Confidence            379999999999999999999999998765432221  122333333333211                     579999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.+.+.+.+++.++++|||+.+++|.+++...+.+++..+..++.|++.||.|||+.+|+||||
T Consensus        60 ~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di  123 (278)
T cd05606          60 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDL  123 (278)
T ss_pred             eeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence            9999999999999999999999999999887778999999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.84  E-value=6.2e-20  Score=134.24  Aligned_cols=124  Identities=21%  Similarity=0.388  Sum_probs=105.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+.|++.++||.|+||.||+|... +++.+++|.+.....  ....+.+|+.+++.                      
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~----------------------   57 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM--SPEAFLAEANLMKQ----------------------   57 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC--cHHHHHHHHHHHHh----------------------
Confidence            45678999999999999999999865 467899998864332  23567889888888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+. ...++++||++.+++|.+++...  ..++...+..++.|++.||+|||+.|++||||
T Consensus        58 --l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl  128 (260)
T cd05067          58 --LQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL  128 (260)
T ss_pred             --cCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence              89999999998874 56789999999999999988653  35888999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.84  E-value=3.6e-20  Score=141.43  Aligned_cols=125  Identities=23%  Similarity=0.340  Sum_probs=103.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|++.+.||.|+||.||++.+..+++.+|+|.+....... ......+|+.+++.                     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   72 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC---------------------   72 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHH---------------------
Confidence            35678999999999999999999999999999999986432221 22456678888887                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++.+...      ..+|++|||+++ ++.+.+..  .++...+..++.|++.||.|||++||+||||
T Consensus        73 ---l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDi  145 (355)
T cd07874          73 ---VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  145 (355)
T ss_pred             ---hCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               8899999999988643      357999999965 67776643  3888999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.84  E-value=2.5e-20  Score=135.97  Aligned_cols=116  Identities=16%  Similarity=0.222  Sum_probs=98.7

Q ss_pred             eeecccceeEEEEEEEecCC----------cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         35 ELLGTGAFSEVRLAESRENG----------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~----------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +.||.|+||.||++.+..++          ..+++|.+......  ...+.+|+.+++.                     
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~---------------------   57 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQ---------------------   57 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHc---------------------
Confidence            46899999999999998766          35777776443321  4566778888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|++++++++.. ...+++|||+++++|.+++.... .++...+..++.||+.||+|||++||+||||
T Consensus        58 ---l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  127 (259)
T cd05037          58 ---LSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNV  127 (259)
T ss_pred             ---CCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccC
Confidence               889999999998877 77899999999999999998765 6899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=4.2e-20  Score=136.97  Aligned_cols=127  Identities=28%  Similarity=0.448  Sum_probs=113.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....+.|.+.+.||.|++|.||++.+..++..+++|.+.....  ....+..|+.++..                     
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~---------------------   71 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKD---------------------   71 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHH---------------------
Confidence            4566679999999999999999999998899999999865432  34567788888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|++++++.+......|+++||+++++|.+++.... .++...+..++.|++.||+|||+.|++|+||
T Consensus        72 ---l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl  142 (286)
T cd06614          72 ---CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDI  142 (286)
T ss_pred             ---CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence               899999999999999999999999999999999998776 7999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.84  E-value=3.6e-20  Score=136.14  Aligned_cols=118  Identities=20%  Similarity=0.307  Sum_probs=95.7

Q ss_pred             eecccceeEEEEEEEec--CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         36 LLGTGAFSEVRLAESRE--NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .||.|+||.||+|....  ....+++|.+...........+.+|+.+++.                        ++|+||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~------------------------l~h~ni   57 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRE------------------------LNHPNV   57 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHh------------------------CCCCCc
Confidence            68999999999997543  3456788876433222223456678877777                        899999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +++++.+.....++++|||+++++|.+++....     ..++..+..++.||+.||+|||++||+||||
T Consensus        58 i~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  126 (269)
T cd05042          58 LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDL  126 (269)
T ss_pred             ceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccc
Confidence            999999999999999999999999999987643     2467788899999999999999999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.84  E-value=1.4e-19  Score=131.60  Aligned_cols=124  Identities=31%  Similarity=0.516  Sum_probs=110.4

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|...+.||.|++|.||+|.+..++..+++|++...... .....+.+|+.+++.                        +
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS------------------------L   56 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHH------------------------c
Confidence            478899999999999999999989999999998654321 223567788888888                        8


Q ss_pred             CCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+...  ..++++||++++++|.+++.....+++..+..++.|++.||+|||+.|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl  127 (260)
T cd06606          57 QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDI  127 (260)
T ss_pred             CCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            899999999999888  899999999999999999987778999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.84  E-value=5.1e-20  Score=139.52  Aligned_cols=127  Identities=23%  Similarity=0.419  Sum_probs=108.2

Q ss_pred             ccccceE-EEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------------chhHHHHHHHHHhhccccccc
Q psy13106         26 SIEEKYI-LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------------EDSLENEIKVLRRFSQSVHNR   91 (177)
Q Consensus        26 ~~~~~y~-~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------------~~~~~~e~~~~~~~~~~~~~~   91 (177)
                      .+.++|. +.+.||.|+||.||+|.+..+++.+|+|.+........             ...+.+|+.++..        
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--------   76 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE--------   76 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHh--------
Confidence            4566776 45779999999999999999999999999864332110             1135678888887        


Q ss_pred             ccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106         92 LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                                      ++|+||+++++++...+..+++||++. ++|.+++.....+++..+..++.|++.||+|||+.|
T Consensus        77 ----------------l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         77 ----------------IKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             ----------------CCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                            899999999999999999999999996 599999887777999999999999999999999999


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+|+||
T Consensus       140 i~H~dl  145 (335)
T PTZ00024        140 FMHRDL  145 (335)
T ss_pred             eecccc
Confidence            999997

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=8.6e-20  Score=143.42  Aligned_cols=119  Identities=20%  Similarity=0.256  Sum_probs=104.9

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ....|.+.+.||.|+||.||+|.+..+++.|+||...       .....+|+.+++.                       
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~-----------------------  216 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRR-----------------------  216 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHH-----------------------
Confidence            3457999999999999999999999999999999531       2345678999988                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++++......+++|+++. ++|.+++... ..++...+..++.||+.||.|||++||+||||
T Consensus       217 -L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDL  286 (461)
T PHA03211        217 -LSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDI  286 (461)
T ss_pred             -CCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcC
Confidence             899999999999999999999999994 6888887654 45999999999999999999999999999997

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=6.5e-20  Score=134.08  Aligned_cols=120  Identities=28%  Similarity=0.449  Sum_probs=99.6

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||.|+||.||+|.+..+++.+|+|.+........  ......|..++..                       ..+|+|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-----------------------~~~~~~   58 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-----------------------QGESPY   58 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-----------------------cCCCCC
Confidence            578999999999999998999999999865432111  1222333333222                       158999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++++.+..++.+|++|||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl  123 (260)
T cd05611          59 VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI  123 (260)
T ss_pred             eeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999999999999999999999999999988788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.84  E-value=6.5e-20  Score=140.52  Aligned_cols=125  Identities=22%  Similarity=0.329  Sum_probs=103.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||+|+||.||++.+..+++.+|||.+....... ....+.+|+.+++.                     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   79 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC---------------------   79 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHh---------------------
Confidence            34678999999999999999999999999999999986432211 22456678888887                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++.+...      ..+|+||||+++ +|.+.+..  .++...+..++.|++.||+|||++||+||||
T Consensus        80 ---l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  152 (364)
T cd07875          80 ---VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  152 (364)
T ss_pred             ---cCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCC
Confidence               8999999999887533      458999999954 77777643  3788999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.84  E-value=6.2e-20  Score=134.96  Aligned_cols=126  Identities=24%  Similarity=0.471  Sum_probs=106.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|.+.+.||.|+||.||+|.+..+++.+++|.+....  .....+..|+.++..+                      
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~----------------------   59 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKY----------------------   59 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHh----------------------
Confidence            3567899999999999999999999999999999986432  2335677888888772                      


Q ss_pred             cCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       .+|+|++++.+.+...      ..+|++|||+.+++|.+++...  ..+++..+..++.|++.||+|||++||+|+||
T Consensus        60 -~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl  137 (272)
T cd06637          60 -SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDI  137 (272)
T ss_pred             -cCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence             2699999999998642      4689999999999999988753  35889999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.84  E-value=5.4e-20  Score=139.54  Aligned_cols=125  Identities=26%  Similarity=0.435  Sum_probs=104.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.++|.+.+.||.|+||.||++.+..+++.|++|.+...........+..|+.++..                       
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-----------------------   59 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRR-----------------------   59 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHh-----------------------
Confidence            456899999999999999999999999999999998543222223456678888888                       


Q ss_pred             cCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++++...     ..+|++||++. ++|.+.+.. ..+++..+..++.|++.||+|||+.||+||||
T Consensus        60 -l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dl  132 (336)
T cd07849          60 -FKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDL  132 (336)
T ss_pred             -CCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence             8899999999876543     35899999995 588877754 45999999999999999999999999999997

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=8.7e-20  Score=144.10  Aligned_cols=129  Identities=22%  Similarity=0.380  Sum_probs=104.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.||||++....  ........|+.++..+...                  ..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~------------------~~  187 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQA------------------DP  187 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhc------------------Cc
Confidence            468999999999999999999999999999999985321  1223445666666663211                  11


Q ss_pred             CCCCCceeeEEEEecC-CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        108 LTHPNIVQLIETFEDK-HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      .+|.+++.+++++... .++|++|+++ +++|.+++...+.+++..+..++.||+.||+|||+ .|||||||
T Consensus       188 ~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDl  258 (467)
T PTZ00284        188 ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDL  258 (467)
T ss_pred             ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence            4566789999888754 5799999988 77999998888889999999999999999999998 59999997

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.84  E-value=5.9e-20  Score=134.16  Aligned_cols=118  Identities=25%  Similarity=0.365  Sum_probs=101.6

Q ss_pred             eeecccceeEEEEEEEecCC---cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|+||.||+|.+...+   ..+++|.+...........+..|+.+++.                        ++|+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~   56 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQ------------------------LDHP   56 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHh------------------------cCCC
Confidence            46899999999999887655   78999998655433233567788888887                        8899


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |++++++++. .+..+++||++++++|.+++.....+++..+..++.|++.||+|||+.|++|+||
T Consensus        57 ~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di  121 (257)
T cd05060          57 CIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDL  121 (257)
T ss_pred             CeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCc
Confidence            9999999875 4568999999999999999988778999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.84  E-value=2.9e-20  Score=135.80  Aligned_cols=117  Identities=29%  Similarity=0.556  Sum_probs=103.6

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||.||++.+..+++.+++|.+......  .....+.+|+.++..                        ++|+|++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~------------------------~~h~~i~   56 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ------------------------AQSPYVV   56 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHh------------------------CCCcchh
Confidence            68899999999999989999999998654332  223556778888887                        8899999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+...+..|++||++++++|.+++.+.+.+++..+..++.||+.||+|||+.|++|+||
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di  119 (265)
T cd05579          57 KLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL  119 (265)
T ss_pred             HHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCC
Confidence            999999999999999999999999999988778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.84  E-value=5.6e-20  Score=136.74  Aligned_cols=124  Identities=25%  Similarity=0.386  Sum_probs=106.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+++|.+........ ...+.+|+.++..                        
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------   60 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLK------------------------   60 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHh------------------------
Confidence            579999999999999999999998999999999875433221 2345678888888                        


Q ss_pred             CCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.||||+++.+++...  +..|++|||+. ++|.+++.... .+++..+..++.||+.||+|||++|++|+||
T Consensus        61 l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl  132 (293)
T cd07843          61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDL  132 (293)
T ss_pred             cCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            8899999999998876  88999999996 48988886543 4899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.84  E-value=7.9e-20  Score=134.01  Aligned_cols=123  Identities=22%  Similarity=0.385  Sum_probs=103.8

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|++.++||.|+||.||+|.+..+ ..+++|.+.....  ....+.+|+.++..                       
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~--~~~~~~~E~~~l~~-----------------------   57 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--SPEAFLQEAQVMKK-----------------------   57 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc--CHHHHHHHHHHHHh-----------------------
Confidence            346899999999999999999988655 4699999864321  23467788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++.+. ....+++|||+++++|.+++...  ..++...+..++.|++.||+|||+.|++|+||
T Consensus        58 -l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl  128 (262)
T cd05071          58 -LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  128 (262)
T ss_pred             -CCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence             88999999998875 45689999999999999998753  34788999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.84  E-value=4.4e-20  Score=137.18  Aligned_cols=124  Identities=23%  Similarity=0.362  Sum_probs=102.8

Q ss_pred             ceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .|++.+.||.|+||.||+|....     ....+++|.+...........+..|+.++..                     
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~---------------------   59 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQ---------------------   59 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhh---------------------
Confidence            47888999999999999998753     2356888887543322223457778888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc------------------------CCCCHHHHHHHHHHH
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK------------------------GSYTEKDASMLIRQV  160 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~~~~qi  160 (177)
                         ++||||+++++.+...+..+++|||+.+++|.+++...                        ..++...+..++.|+
T Consensus        60 ---l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i  136 (290)
T cd05045          60 ---VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQI  136 (290)
T ss_pred             ---CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHH
Confidence               88999999999999999999999999999999987642                        237788899999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||.|||++||+||||
T Consensus       137 ~~~l~~LH~~~ivH~di  153 (290)
T cd05045         137 SRGMQYLAEMKLVHRDL  153 (290)
T ss_pred             HHHHHHHHHCCeehhhh
Confidence            99999999999999997

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.84  E-value=7.3e-20  Score=137.13  Aligned_cols=131  Identities=21%  Similarity=0.357  Sum_probs=109.9

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      .......+.|.+.+.||.|+||.||++....+++.+++|.+.......  ....+.+|+.+++.                
T Consensus         8 ~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~----------------   71 (307)
T cd06607           8 FSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQ----------------   71 (307)
T ss_pred             hcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHh----------------
Confidence            344556678999999999999999999999899999999986432211  12456788888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++|||++++.+.+.+.+..|++|||++ +++.+++.. ...+++..+..++.|++.||.|||+.||+|+||
T Consensus        72 --------l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl  141 (307)
T cd06607          72 --------LRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDI  141 (307)
T ss_pred             --------CCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence                    899999999999999999999999996 577776653 456899999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.84  E-value=1.8e-19  Score=135.02  Aligned_cols=126  Identities=25%  Similarity=0.383  Sum_probs=106.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ..+.|.+.+.||.|+||.||+|.+..+++.||+|.+........ .....+|+.+++.                      
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----------------------   62 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN----------------------   62 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHh----------------------
Confidence            35679999999999999999999999999999999865432221 2345678888888                      


Q ss_pred             ccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++++.+.  +.++++||++.+ +|.+++.. ...+++..+..++.||+.||+|||+.|++||||
T Consensus        63 --l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  134 (309)
T cd07845          63 --LRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDL  134 (309)
T ss_pred             --CCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence              8999999999998754  568999999964 78887764 356899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG4717|consensus

Probab=99.84  E-value=1e-20  Score=145.34  Aligned_cols=132  Identities=34%  Similarity=0.551  Sum_probs=118.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .-...+.+-|.+.+.||+|-|..|.+|++.=+|+.||||+|.+...... ...+..|++.++-                 
T Consensus        11 i~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKL-----------------   73 (864)
T KOG4717|consen   11 IYDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKL-----------------   73 (864)
T ss_pred             ccccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHH-----------------
Confidence            4455667789999999999999999999999999999999987765443 3678899999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             +.||||+++|+.......+|+++|.=++|+|++||.... .++++.++.|+.||+.|+.|||...+|||||
T Consensus        74 -------VQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDL  144 (864)
T KOG4717|consen   74 -------VQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDL  144 (864)
T ss_pred             -------hcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccC
Confidence                   789999999999999999999999999999999997653 4999999999999999999999999999997

>KOG1026|consensus

Probab=99.84  E-value=7.3e-21  Score=152.53  Aligned_cols=125  Identities=25%  Similarity=0.462  Sum_probs=110.2

Q ss_pred             cceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....+.+.||.|+||+||+|+.-     .....||||.++.....+....+.+|++++..                    
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~--------------------  545 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAE--------------------  545 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHh--------------------
Confidence            34567788999999999999864     34578999999776655567889999999999                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--------------SYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                          ++||||+++++...+.+.+++|+||+..|+|.++|...+              +++..+...++.||+.||.||-+
T Consensus       546 ----l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~  621 (774)
T KOG1026|consen  546 ----LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS  621 (774)
T ss_pred             ----ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                899999999999999999999999999999999997542              27788999999999999999999


Q ss_pred             CCccccCC
Q psy13106        170 ARYLSKPR  177 (177)
Q Consensus       170 ~giiH~Dl  177 (177)
                      +.+|||||
T Consensus       622 ~~FVHRDL  629 (774)
T KOG1026|consen  622 HHFVHRDL  629 (774)
T ss_pred             Ccccccch
Confidence            99999997

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.84  E-value=7.7e-20  Score=134.46  Aligned_cols=125  Identities=24%  Similarity=0.354  Sum_probs=104.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++|.+.+.||.|+||.||+|.+...   ...++||.............+..|+.+++.                     
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~---------------------   63 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQ---------------------   63 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHh---------------------
Confidence            45799999999999999999987644   456899987544322233567788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|+|++++++.+.+ ...+++||++++++|.+++.... .++...+..++.|++.||+|||+.|++|+||
T Consensus        64 ---~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl  133 (270)
T cd05056          64 ---FDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDI  133 (270)
T ss_pred             ---CCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence               889999999998865 55789999999999999997644 4899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.84  E-value=1.2e-19  Score=133.45  Aligned_cols=120  Identities=23%  Similarity=0.430  Sum_probs=100.0

Q ss_pred             cceEEEeee--cccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELL--GTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~l--g~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+.+.+  |.|+||.||++....++..+++|.+......    ..  |..+....                      
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~--e~~~~~~~----------------------   65 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AI--EPMVHQLM----------------------   65 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hh--hHHHHHHh----------------------
Confidence            456666665  9999999999999999999999998643221    11  22211110                      


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       .+|+|++++++.+..++..|++|||+++++|.+++..+..++++.+..++.|++.||.|||+.|++||||
T Consensus        66 -~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  135 (267)
T PHA03390         66 -KDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDI  135 (267)
T ss_pred             -hcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence             3699999999999999999999999999999999988778999999999999999999999999999997

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.84  E-value=1.1e-19  Score=138.27  Aligned_cols=127  Identities=23%  Similarity=0.403  Sum_probs=106.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|++.+.||.|+||.||++.+..++..||||.+...... .....+..|+.+++.                    
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   70 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH--------------------   70 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHh--------------------
Confidence            34677899999999999999999999999999999998543211 122456788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++.+....      .++++|+++ +++|.+++.. ..+++..++.++.||+.||+|||+.||+||||
T Consensus        71 ----l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dl  144 (343)
T cd07880          71 ----MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDL  144 (343)
T ss_pred             ----cCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                89999999999887543      468999999 7788887754 45999999999999999999999999999997

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.84  E-value=8.9e-20  Score=136.08  Aligned_cols=128  Identities=27%  Similarity=0.463  Sum_probs=107.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....+.|.+.+.||.|+||.||+|.+..+++.+++|.+....... ....+..|+.+++.                    
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~--------------------   62 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ--------------------   62 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHh--------------------
Confidence            345678999999999999999999999999999999986543222 22456678888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCC----------eEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        104 DKERLTHPNIVQLIETFEDKH----------KVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~----------~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                          ++|||++++++++.+..          .++++|||+++ ++.+.+... ..+++..++.++.||+.||+|||+.||
T Consensus        63 ----l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  137 (302)
T cd07864          63 ----LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF  137 (302)
T ss_pred             ----CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                89999999999887554          79999999975 777776654 358999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +|+||
T Consensus       138 ~H~dl  142 (302)
T cd07864         138 LHRDI  142 (302)
T ss_pred             ecCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.84  E-value=2.1e-19  Score=134.40  Aligned_cols=129  Identities=26%  Similarity=0.358  Sum_probs=105.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .....++|.+.+.||.|+||.||+|.+..+++.+|||.+....... ......+|+.+++.                   
T Consensus         7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~-------------------   67 (310)
T cd07865           7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL-------------------   67 (310)
T ss_pred             ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHh-------------------
Confidence            3344568999999999999999999999999999999986433221 12344578888888                   


Q ss_pred             cccccCCCCCceeeEEEEecC--------CeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        103 KDKERLTHPNIVQLIETFEDK--------HKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                           +.||||+++++.+...        ...+++|||+. ++|.+.+.... .+++..+..++.||+.||+|||++|++
T Consensus        68 -----l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~  141 (310)
T cd07865          68 -----LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKIL  141 (310)
T ss_pred             -----CCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence                 8899999999987644        34699999995 58887776543 589999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      |+||
T Consensus       142 H~dl  145 (310)
T cd07865         142 HRDM  145 (310)
T ss_pred             ccCC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.84  E-value=8.1e-20  Score=133.63  Aligned_cols=117  Identities=25%  Similarity=0.423  Sum_probs=98.1

Q ss_pred             eecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         36 LLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .||.|+||.||+|.+.  ..+..+++|++...........+.+|+.+++.                        ++|+||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~------------------------l~h~~i   57 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQ------------------------LDNPYI   57 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHh------------------------cCCCCe
Confidence            4899999999999875  34557999988654322233567788898988                        899999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +++++.+. ....+++|||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||
T Consensus        58 i~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  121 (257)
T cd05115          58 VRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDL  121 (257)
T ss_pred             EEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence            99999875 4578999999999999998875 346899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.83  E-value=1.1e-19  Score=133.00  Aligned_cols=124  Identities=23%  Similarity=0.405  Sum_probs=105.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|++.+.||.|+||.||+|... .+..+++|.+.....  ....+.+|+.+++.                      
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~----------------------   57 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM--SPESFLEEAQIMKK----------------------   57 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC--CHHHHHHHHHHHHh----------------------
Confidence            45568999999999999999999766 456799998864332  23567889988888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+. ....+++||++++++|.+++...  ..+++..+..++.|++.||+|||++||+||||
T Consensus        58 --l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di  128 (260)
T cd05070          58 --LRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL  128 (260)
T ss_pred             --cCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence              89999999999875 45688999999999999998753  34889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.83  E-value=8e-20  Score=138.68  Aligned_cols=126  Identities=25%  Similarity=0.425  Sum_probs=107.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.++|.+.+.||.|+||.||++.+..+++.++||.+...... .....+..|+.++..                      
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----------------------   60 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH----------------------   60 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh----------------------
Confidence            356899999999999999999999999999999998653211 122456678888888                      


Q ss_pred             ccCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+||+++++++...     ..+|++|||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||
T Consensus        61 --l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl  134 (337)
T cd07858          61 --LDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDL  134 (337)
T ss_pred             --cCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence              8899999999877643     35899999995 689999888788999999999999999999999999999997

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.83  E-value=4.9e-20  Score=139.67  Aligned_cols=125  Identities=26%  Similarity=0.411  Sum_probs=107.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .+.|.+.+.||.|++|.||+|.+..+++.+++|.+...... .....+..|+.++..                       
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   60 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRH-----------------------   60 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHh-----------------------
Confidence            46899999999999999999999999999999998654322 123456678888888                       


Q ss_pred             cCCCCCceeeEEEEe----cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFE----DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+||+++++++.    ....++++|||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus        61 -l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  133 (334)
T cd07855          61 -FKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDL  133 (334)
T ss_pred             -cCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence             88999999998775    3357899999995 689999887777999999999999999999999999999997

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.83  E-value=9.8e-20  Score=136.91  Aligned_cols=116  Identities=25%  Similarity=0.414  Sum_probs=96.2

Q ss_pred             EeeecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         34 KELLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      ..+||.|+||.||+|.++  .+++.+|+|.+....   ......+|+.+++.                        ++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~------------------------l~h~   58 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRE------------------------LKHP   58 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHh------------------------cCCC
Confidence            468999999999999976  467899999885432   23456789999988                        8999


Q ss_pred             CceeeEEEEec--CCeEEEEEeccCCcchhHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFED--KHKVYLVMELVTGGELFDRIVEK---------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+..  ...+|++||++. ++|.+++...         ..+++..++.++.||+.||+|||++||+||||
T Consensus        59 niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDl  134 (317)
T cd07868          59 NVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL  134 (317)
T ss_pred             CCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence            99999998854  467899999995 5888876532         24889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.83  E-value=7.7e-20  Score=134.56  Aligned_cols=119  Identities=24%  Similarity=0.482  Sum_probs=99.1

Q ss_pred             eeecccceeEEEEEEEecCCc--EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC-CCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGT--MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL-THP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~  111 (177)
                      +.||.|+||.||++....++.  .+++|.+...........+..|+.++.+                        + .||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~------------------------l~~h~   56 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK------------------------LGHHP   56 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHh------------------------hccCC
Confidence            368999999999999987765  4577776533222233567788888887                        5 799


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                      ||+++++.+...+..|++|||+++++|.+++....                .++...+..++.|++.||+|||++|++||
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~  136 (270)
T cd05047          57 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  136 (270)
T ss_pred             CeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            99999999999999999999999999999987542                37889999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       137 di  138 (270)
T cd05047         137 DL  138 (270)
T ss_pred             cc
Confidence            97

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.83  E-value=1.2e-20  Score=138.02  Aligned_cols=118  Identities=19%  Similarity=0.221  Sum_probs=98.2

Q ss_pred             eeecccceeEEEEEEEecCCc-------EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         35 ELLGTGAFSEVRLAESRENGT-------MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~-------~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.||.|+||.||+|.+...+.       .+++|.+.... ....+.+..|..+++.                        
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~------------------------   55 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQ------------------------   55 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHh------------------------
Confidence            468999999999999865443       47778764332 1223456677777777                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|||++++++++..+...+++|||+++++|.+++..++ .+++..+..++.||+.||+|||++||+||||
T Consensus        56 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dl  126 (258)
T cd05078          56 LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNV  126 (258)
T ss_pred             CCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            889999999999998889999999999999999987654 4889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.83  E-value=1e-19  Score=135.19  Aligned_cols=124  Identities=23%  Similarity=0.405  Sum_probs=105.4

Q ss_pred             cceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..|.+.+.||.|+||.||++...     .++..+++|.+.... ......+..|+.++..                    
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~--------------------   63 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTN--------------------   63 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHh--------------------
Confidence            46899999999999999999853     345678999875432 1223567788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-------------SYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                          ++|+|++++++++...+.++++|||+++++|.+++...+             .+++..+..++.|++.||+|||++
T Consensus        64 ----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~  139 (288)
T cd05093          64 ----LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ  139 (288)
T ss_pred             ----CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                889999999999999999999999999999999987543             389999999999999999999999


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      |++||||
T Consensus       140 ~i~H~dl  146 (288)
T cd05093         140 HFVHRDL  146 (288)
T ss_pred             Ceeeccc
Confidence            9999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.83  E-value=8.1e-20  Score=135.16  Aligned_cols=124  Identities=21%  Similarity=0.303  Sum_probs=98.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcE----EEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTM----FAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ++|++.+.||.|+||.||+|.+..+++.    +++|.+...........+..|+.++..                     
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~---------------------   65 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS---------------------   65 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc---------------------
Confidence            4789999999999999999999777664    666665322111112344455555555                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++. ....++++|++++++|.+++... ..+++..+..++.||+.||+|||++|++||||
T Consensus        66 ---l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl  135 (279)
T cd05111          66 ---LDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNL  135 (279)
T ss_pred             ---CCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence               89999999999875 45578899999999999999754 46899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.83  E-value=3.5e-19  Score=132.32  Aligned_cols=125  Identities=24%  Similarity=0.473  Sum_probs=106.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||++....+++.+++|.+....  .....+..|+.++..                       
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~-----------------------   74 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQS-----------------------   74 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHH-----------------------
Confidence            4678999999999999999999999999999999985432  123456678887777                       


Q ss_pred             cC-CCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        107 RL-THPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       107 ~~-~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                       + +|+|++++++.+...     ..+|++|||+++++|.+++..    ...+++..++.++.|++.||+|||+.|++|+|
T Consensus        75 -l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  153 (291)
T cd06639          75 -LPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRD  153 (291)
T ss_pred             -hcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence             5 799999999988643     358999999999999988752    34689999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       154 l  154 (291)
T cd06639         154 V  154 (291)
T ss_pred             C
Confidence            7

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.83  E-value=1.6e-19  Score=133.33  Aligned_cols=123  Identities=33%  Similarity=0.496  Sum_probs=101.8

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      |.+.+.||.|+||.||++.+..+++.+++|.+..............|+.++..+                       .+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----------------------~~h   57 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRL-----------------------SPH   57 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhc-----------------------CCC
Confidence            678999999999999999999999999999986543222222334566666661                       259


Q ss_pred             CCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        111 PNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       111 ~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|++++++.+.++  +.++++|||++ +++.+.+... ..+++..+..++.|++.||+|||+.|++||||
T Consensus        58 ~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  126 (282)
T cd07831          58 PNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDI  126 (282)
T ss_pred             CCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            9999999999877  88999999996 5888877653 46899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.83  E-value=2.2e-19  Score=134.66  Aligned_cols=123  Identities=28%  Similarity=0.476  Sum_probs=104.0

Q ss_pred             ceEEEeeecccceeEEEEEEEec--CCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRE--NGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~--~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +|.+.+.||+|++|.||+|.+..  +++.+|+|.+.....  ........+|+.++..                      
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~----------------------   58 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE----------------------   58 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh----------------------
Confidence            48899999999999999999988  889999999875321  1223556778888888                      


Q ss_pred             ccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEK-----GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|||++++++++.+.  ..++++||++++ ++.+.+...     ..+++..++.++.||+.||.|||+.||+||||
T Consensus        59 --l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dl  134 (316)
T cd07842          59 --LKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDL  134 (316)
T ss_pred             --cCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCC
Confidence              8999999999999987  889999999964 777766422     25889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.83  E-value=9.9e-20  Score=138.45  Aligned_cols=124  Identities=28%  Similarity=0.410  Sum_probs=105.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +..+|.+.+.||.|+||.||+|.+..+++.+++|.+..... .....+.+|+.+++.                       
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~-----------------------   58 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRR-----------------------   58 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHh-----------------------
Confidence            35789999999999999999999999999999999865432 233557788888888                       


Q ss_pred             cCCCCCceeeEEEEecC--------------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        107 RLTHPNIVQLIETFEDK--------------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                       ++|||++++++.+...              ..+|++|||+. ++|.+++.. ..+++..++.++.||+.||.|||+.||
T Consensus        59 -l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~gi  135 (342)
T cd07854          59 -LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANV  135 (342)
T ss_pred             -cCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence             8899999998766543              36899999996 588887754 458999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       136 vH~di  140 (342)
T cd07854         136 LHRDL  140 (342)
T ss_pred             ccCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0599|consensus

Probab=99.83  E-value=3.9e-21  Score=137.42  Aligned_cols=128  Identities=37%  Similarity=0.610  Sum_probs=111.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-------hhHHHHHHHHHhhcccccccccccccCC
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-------DSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-------~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +...|.-.+.||+|..+.|..|.++.++..+|+|++.-.......       ..-..|+.+++++               
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv---------------   79 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQV---------------   79 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHh---------------
Confidence            445677888999999999999999999999999999643322221       2334688888886               


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              .+||+|+++.+.++++.++++|+|.|+.|.|++++.+.-.++++.++.+++|+.+|+.|||.++||||||
T Consensus        80 --------~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDL  149 (411)
T KOG0599|consen   80 --------MGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDL  149 (411)
T ss_pred             --------cCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence                    5899999999999999999999999999999999998878999999999999999999999999999997

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.83  E-value=1.1e-19  Score=134.50  Aligned_cols=122  Identities=25%  Similarity=0.383  Sum_probs=106.0

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |...+.||.|++|.||+|.+..+++.++||.+....... ....+..|+.+++.                        ++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~   57 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------------------------LN   57 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHh------------------------cC
Confidence            888999999999999999999999999999886443222 22467789998888                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |||++++++++.+.+..+++|||+. ++|..++..  ...+++..+..++.|++.||+|||+.|++|+||
T Consensus        58 h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l  126 (284)
T cd07860          58 HPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  126 (284)
T ss_pred             CCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999999999999999999999995 588888764  345899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.83  E-value=2.5e-19  Score=135.58  Aligned_cols=126  Identities=26%  Similarity=0.406  Sum_probs=106.7

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||++.+..+++.+++|.+....... ....+..|+.++..                     
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   65 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKH---------------------   65 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHh---------------------
Confidence            35678999999999999999999999999999999875432211 23556788888888                     


Q ss_pred             cccCCCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|||++++.+++.. ...++++||++ +++|.+++.. ..+++..+..++.|++.||+|||+.||+||||
T Consensus        66 ---l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl  134 (328)
T cd07856          66 ---LRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDL  134 (328)
T ss_pred             ---cCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               899999999999875 56789999999 5688887754 35888999999999999999999999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.83  E-value=2.2e-19  Score=133.57  Aligned_cols=124  Identities=22%  Similarity=0.307  Sum_probs=103.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.|.+.+.||.|+||.||+|.+..+++.+++|.+....... ....+.+|+.++..                        
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~------------------------   56 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQM------------------------   56 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHH------------------------
Confidence            36999999999999999999999999999999976543211 22456778888888                        


Q ss_pred             C-CCCCceeeEEEEecCCe-----EEEEEeccCCcchhHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        108 L-THPNIVQLIETFEDKHK-----VYLVMELVTGGELFDRIVEK-----GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       108 ~-~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                      + .|+|++++++.+.....     .|++|||+++ +|.+++...     ..+++..++.++.||+.||.|||++||+|||
T Consensus        57 l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~d  135 (295)
T cd07837          57 LSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRD  135 (295)
T ss_pred             ccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            5 46999999998876555     8999999975 888877542     3479999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       136 l  136 (295)
T cd07837         136 L  136 (295)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.83  E-value=7.9e-20  Score=134.38  Aligned_cols=119  Identities=18%  Similarity=0.224  Sum_probs=97.7

Q ss_pred             eeecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +.||+|+||.||+|...  .+...+++|.+...........+.+|+.+++.                        ++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~------------------------l~h~~   56 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS------------------------LQHSN   56 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh------------------------CCCCC
Confidence            36899999999999865  34567899987544322222456778888888                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++++++.+...++++|||+++++|.+++....     ..+...+..++.|++.||+|||+.|++||||
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl  126 (269)
T cd05087          57 LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDL  126 (269)
T ss_pred             EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence            9999999998889999999999999999986432     3566778889999999999999999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.83  E-value=1.6e-19  Score=133.48  Aligned_cols=127  Identities=21%  Similarity=0.433  Sum_probs=106.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+.|++.+.||.|+||.||+|.+..+++.+++|++....  .....+..|+.++..+                     
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~---------------------   69 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKY---------------------   69 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHh---------------------
Confidence            34568999999999999999999999999999999985432  2234567777777772                     


Q ss_pred             ccCCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        .+|+|++++++++..      ...+|++|||+++++|.+++...  ..+++..+..++.||+.||+|||+.||+|+||
T Consensus        70 --~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl  147 (282)
T cd06636          70 --SHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDI  147 (282)
T ss_pred             --cCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence              279999999998852      46789999999999999988653  34888889999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.83  E-value=2.9e-19  Score=130.27  Aligned_cols=122  Identities=25%  Similarity=0.416  Sum_probs=106.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .+|++.+.||.|+||.||++.+.. +..+++|.+.....  ....+..|+.+++.                        +
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~--~~~~~~~e~~~l~~------------------------l   56 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAM--SEEDFIEEAQVMMK------------------------L   56 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCC--CHHHHHHHHHHHHh------------------------C
Confidence            479999999999999999998863 66899998753321  23567789998888                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|||++++++.+......+++|||+++++|.+++... +.++++.+..++.|++.+++|||+.|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl  126 (256)
T cd05112          57 SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL  126 (256)
T ss_pred             CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            8999999999999889999999999999999988754 45889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.83  E-value=1.8e-19  Score=132.40  Aligned_cols=119  Identities=26%  Similarity=0.394  Sum_probs=103.1

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      ...||.|+||.||++.+..++..+++|.+..... .....+.+|+.++..                        ++|+||
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~------------------------l~h~~i   67 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSY------------------------LKHRNI   67 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHh------------------------cCCCCe
Confidence            3579999999999999998899999998764432 223467788888888                        889999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSY--TEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~--~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +++++++..++..+++||++++++|.+++... ..+  ++..+..++.||+.||+|||++||+||||
T Consensus        68 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl  134 (268)
T cd06624          68 VQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDI  134 (268)
T ss_pred             eeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence            99999999999999999999999999988754 445  78889999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.83  E-value=3.8e-20  Score=137.87  Aligned_cols=131  Identities=23%  Similarity=0.368  Sum_probs=111.1

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ........+.|.....||.|+||.||++....++..++||.+..... .....+.+|+.++..                 
T Consensus        14 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~-----------------   75 (292)
T cd06658          14 VVSPGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRD-----------------   75 (292)
T ss_pred             EeccCchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH-HHHHHHHHHHHHHHh-----------------
Confidence            34455556677778899999999999999988899999999854321 223456778888877                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++|+|++++++.+...+..|++|||+++++|.+++.. +.+++..+..++.||+.||+|||++||+||||
T Consensus        76 -------l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  144 (292)
T cd06658          76 -------YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDI  144 (292)
T ss_pred             -------CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence                   8899999999999999999999999999999887754 45899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.83  E-value=2.5e-19  Score=131.09  Aligned_cols=124  Identities=22%  Similarity=0.364  Sum_probs=105.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.+.+.||+|+||.||++... .+..+++|.+....  .....+.+|+.+++.                      
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~----------------------   57 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--MSVEAFLAEANVMKT----------------------   57 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh--hHHHHHHHHHHHHHh----------------------
Confidence            45678999999999999999999865 45679999875432  123567788888888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|+|++++++.+.+ ...+++|||+++++|.+++...  ..++...+..++.|++.||.|||+.|++|+||
T Consensus        58 --l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl  128 (260)
T cd05073          58 --LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL  128 (260)
T ss_pred             --cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence              899999999999877 7789999999999999998753  34778889999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.83  E-value=1.8e-19  Score=133.68  Aligned_cols=124  Identities=27%  Similarity=0.525  Sum_probs=106.1

Q ss_pred             ceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEecccccc---cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKG---KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .|.+.+.||.|++|.||++.+.   .+++.++||.+.......   ....+..|+.++..                    
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~--------------------   60 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA--------------------   60 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHh--------------------
Confidence            3889999999999999999864   356889999986532211   22456678888887                    


Q ss_pred             ccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          + +|+|++.+++.+..+..++++|||+.+++|.+++.....+++..+..++.|++.+|+|||+.|++|+||
T Consensus        61 ----~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl  131 (288)
T cd05583          61 ----VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDI  131 (288)
T ss_pred             ----ccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                5 699999999999999999999999999999999887777999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.83  E-value=2.1e-19  Score=132.73  Aligned_cols=127  Identities=17%  Similarity=0.222  Sum_probs=105.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEec----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRE----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..++|.+.+.||.|+||.||+|.+..    ++..+++|.+...........+.+|..+++.                   
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~-------------------   64 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYG-------------------   64 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHh-------------------
Confidence            35689999999999999999999876    3578999987543222233556778888887                   


Q ss_pred             cccccCCCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        103 KDKERLTHPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK--------GSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                           ++|+|++++++++.. +...+++++++++++|.+++...        ..++...+..++.|++.||+|||++|++
T Consensus        65 -----l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~  139 (280)
T cd05043          65 -----LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVI  139 (280)
T ss_pred             -----CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence                 899999999997664 57789999999999999988653        3488999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       140 H~di  143 (280)
T cd05043         140 HKDI  143 (280)
T ss_pred             eccc
Confidence            9997

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.6e-19  Score=132.70  Aligned_cols=123  Identities=15%  Similarity=0.309  Sum_probs=100.8

Q ss_pred             eEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      |.+++.||.|+||.||.|....+   ...+|+|.+....... ....+..|+..++.                       
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-----------------------   57 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD-----------------------   57 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHh-----------------------
Confidence            56789999999999999987653   4789999986433221 12456778888887                       


Q ss_pred             cCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        107 RLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEK------GSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                       ++|+|++++++.+....      ..+++|||+++++|.+++...      ..+++..+..++.|++.||.|||++|++|
T Consensus        58 -l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H  136 (273)
T cd05035          58 -FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIH  136 (273)
T ss_pred             -CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence             89999999999876544      389999999999999887432      25889999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       137 ~dl  139 (273)
T cd05035         137 RDL  139 (273)
T ss_pred             ccc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0690|consensus

Probab=99.83  E-value=3e-21  Score=141.02  Aligned_cols=131  Identities=25%  Similarity=0.484  Sum_probs=114.5

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+.-+.|..++.||.|+||+|.+|+.+.+++.||+|++++...-..  ...-..|-++++.                 
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~-----------------  224 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQN-----------------  224 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHh-----------------
Confidence            344566789999999999999999999999999999999976644222  2334567777777                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ..||.+..+-..|+.+..+|+||||.+||.|+-.+.....++++.++.+-.+|+.||.|||+++||.|||
T Consensus       225 -------~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDl  294 (516)
T KOG0690|consen  225 -------CRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDL  294 (516)
T ss_pred             -------ccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeec
Confidence                   8999999999999999999999999999999998887778999999999999999999999999999997

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.83  E-value=2.8e-19  Score=130.82  Aligned_cols=123  Identities=21%  Similarity=0.373  Sum_probs=103.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|++|.||++.+..+ ..+++|.+....  .....+.+|+.+++.                       
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~--~~~~~~~~E~~~l~~-----------------------   57 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT--MMPEAFLQEAQIMKK-----------------------   57 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC--ccHHHHHHHHHHHHh-----------------------
Confidence            456899999999999999999987655 468999875432  123456788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+|++++++++. .+..+++||++.+++|.+++....  .++...+..++.|++.||.|||+.|++|+||
T Consensus        58 -l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl  128 (260)
T cd05069          58 -LRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDL  128 (260)
T ss_pred             -CCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence             89999999998875 456889999999999999987543  4788999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.83  E-value=1.6e-19  Score=131.22  Aligned_cols=118  Identities=27%  Similarity=0.456  Sum_probs=100.3

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      +.||.|+||.||++... ++..+++|.+...........+.+|+.++..                        ++|+|++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~~i~   55 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQ------------------------YDHPNIV   55 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHh------------------------CCCCCcC
Confidence            36899999999999854 6788999987644322223456778888887                        8899999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+...+..+++|||+++++|.+++... ..+++..+..++.|++.+|.|+|++|++|+||
T Consensus        56 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl  119 (250)
T cd05085          56 KLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDL  119 (250)
T ss_pred             eEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence            9999999989999999999999999988654 35789999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG2052|consensus

Probab=99.83  E-value=3.6e-20  Score=139.59  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=111.2

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      -......++.++.++.+.||+|.||.||+|.|+  |+.||||++....    ...+.+|.++++.+.             
T Consensus       201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd----E~SWfrEtEIYqTvm-------------  261 (513)
T KOG2052|consen  201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD----ERSWFRETEIYQTVM-------------  261 (513)
T ss_pred             chhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc----hhhhhhHHHHHHHHH-------------
Confidence            344556677888999999999999999999998  7899999986543    356788999998866             


Q ss_pred             CCcccccccCCCCCceeeEEEEecC----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC----
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDK----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA----  170 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~----  170 (177)
                               ++|+||+.+++.-..+    ..+|||++|.+.|+|+|++.++ .++......++..++.||++||-.    
T Consensus       262 ---------LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GT  331 (513)
T KOG2052|consen  262 ---------LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGT  331 (513)
T ss_pred             ---------hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence                     8999999999875533    2499999999999999999885 499999999999999999999964    


Q ss_pred             ----CccccCC
Q psy13106        171 ----RYLSKPR  177 (177)
Q Consensus       171 ----giiH~Dl  177 (177)
                          .|.||||
T Consensus       332 qgKPaIAHRDl  342 (513)
T KOG2052|consen  332 QGKPAIAHRDL  342 (513)
T ss_pred             CCCchhhcccc
Confidence                5999997

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.83  E-value=1.9e-19  Score=133.15  Aligned_cols=122  Identities=26%  Similarity=0.412  Sum_probs=106.6

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |.+.+.||.|.+|.||+|.+..++..+++|.+....... ....+.+|+.+++.                        ++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~   56 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKE------------------------LN   56 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHh------------------------cC
Confidence            677889999999999999999999999999986543222 22456778888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+.+.+..|++|||++ ++|.+++....  .+++..+..++.|++.||+|||++|++|+||
T Consensus        57 ~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl  125 (283)
T cd07835          57 HPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDL  125 (283)
T ss_pred             CCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCC
Confidence            9999999999999999999999995 68999887665  6899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.83  E-value=1.5e-19  Score=131.51  Aligned_cols=124  Identities=25%  Similarity=0.445  Sum_probs=107.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||++.+..+++.+++|.+....... ....+..|+.+++.                        +
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILAS------------------------V   56 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHh------------------------C
Confidence            4889999999999999999999999999999986543222 23455677778877                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+||+++.+.+.+....+++||++++++|.+++..    ...+++..+..++.|++.||+|||+.|++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l  129 (256)
T cd08530          57 NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDL  129 (256)
T ss_pred             CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            899999999999999999999999999999998865    345889999999999999999999999999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.83  E-value=3e-19  Score=130.45  Aligned_cols=124  Identities=28%  Similarity=0.464  Sum_probs=105.4

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||++.+..+++.+++|.+....... ....+..|+.+++.                        +
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRE------------------------L   56 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHh------------------------c
Confidence            4889999999999999999999999999999986543222 22456678888887                        8


Q ss_pred             CCCCceeeEEEEe--cCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----hCCccccCC
Q psy13106        109 THPNIVQLIETFE--DKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMH-----EARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH-----~~giiH~Dl  177 (177)
                      +|+|++++++.+.  ....++++|||+++++|.+++..    ..++++..+..++.||+.||.|||     +.+++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl  136 (265)
T cd08217          57 KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDL  136 (265)
T ss_pred             CCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCC
Confidence            9999999999775  34678999999999999998865    356899999999999999999999     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.83  E-value=2.5e-19  Score=136.72  Aligned_cols=125  Identities=24%  Similarity=0.360  Sum_probs=104.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.+|+|.+....... ....+.+|+.+++.                     
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   71 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKL---------------------   71 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHh---------------------
Confidence            34678999999999999999999999999999999985432111 22456678888887                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|++++++++...      ...|++||++. ++|.+.+...  ++...+..++.|++.||+|||++||+||||
T Consensus        72 ---l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dl  144 (353)
T cd07850          72 ---VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL  144 (353)
T ss_pred             ---cCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence               8999999999988643      35799999995 5888877654  889999999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.82  E-value=5.4e-19  Score=127.96  Aligned_cols=123  Identities=28%  Similarity=0.550  Sum_probs=109.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+.+.||.|++|.||++.+..+++.+++|.+..... .....+.+|+.++..                        ++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~------------------------l~   55 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKK------------------------CK   55 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHh------------------------CC
Confidence            47889999999999999999998999999999865442 234567788888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++.+.+..+...++++|++++++|.+++... ..+++..+..++.|++.+|.|||++|++|+||
T Consensus        56 ~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl  124 (253)
T cd05122          56 HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDI  124 (253)
T ss_pred             CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCC
Confidence            999999999999999999999999999999988765 56899999999999999999999999999997

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG1095|consensus

Probab=99.82  E-value=1.1e-19  Score=150.16  Aligned_cols=128  Identities=22%  Similarity=0.371  Sum_probs=111.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCc-----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGT-----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+..++.+.||+|.||.||.|.......     .||||.+......+....+..|..+++.                 
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~-----------------  751 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSK-----------------  751 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhc-----------------
Confidence            445577889999999999999999875543     4888888665544555778889888888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-------GSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                             ++||||+++.+...+....++++|||.+|+|..+|++.       ..+...+...++.||++|+.||+++++|
T Consensus       752 -------f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fv  824 (1025)
T KOG1095|consen  752 -------FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFV  824 (1025)
T ss_pred             -------CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCc
Confidence                   89999999999999999999999999999999999865       2488999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       825 HRDL  828 (1025)
T KOG1095|consen  825 HRDL  828 (1025)
T ss_pred             Ccch
Confidence            9997

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.82  E-value=1.7e-19  Score=132.38  Aligned_cols=118  Identities=18%  Similarity=0.191  Sum_probs=96.1

Q ss_pred             eeecccceeEEEEEEEecC------------CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         35 ELLGTGAFSEVRLAESREN------------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~------------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      +.||.|+||.||+|.....            ...+++|.+.... ......+..|+.++..                   
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~-------------------   60 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQ-------------------   60 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHh-------------------
Confidence            4689999999999985422            2358888765432 1222355666777777                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++..+...+++|||+++++|..++... ..+++..+..++.||+.||+|||++||+||||
T Consensus        61 -----l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dl  131 (262)
T cd05077          61 -----VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNV  131 (262)
T ss_pred             -----CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCC
Confidence                 89999999999999888999999999999998887653 46899999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.82  E-value=9.9e-20  Score=135.94  Aligned_cols=126  Identities=22%  Similarity=0.397  Sum_probs=107.7

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .....|.....||.|+||.||++.+..+++.+++|.+..... .....+.+|+.++..                      
T Consensus        18 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~----------------------   74 (297)
T cd06659          18 DPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRD----------------------   74 (297)
T ss_pred             cchhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHh----------------------
Confidence            334456667789999999999999988899999999865432 233456778888777                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|||++++++.+..++..|++|||+++++|..++.. ..+++..+..++.|++.||.|||++|++|+||
T Consensus        75 --l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl  143 (297)
T cd06659          75 --YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDI  143 (297)
T ss_pred             --CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence              8999999999999999999999999999999887754 45899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.82  E-value=4.7e-19  Score=131.48  Aligned_cols=123  Identities=24%  Similarity=0.408  Sum_probs=107.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ..|...+.||.|++|.||++.+..+++.+++|.+..... .....+.+|+.+++.                        +
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~------------------------~   73 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-QRRELLFNEVVIMRD------------------------Y   73 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHH------------------------c
Confidence            456667899999999999999988999999998754321 223456778888887                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++++.+...+..++++|++++++|.+++.. .+++...+..++.|++.||+|||++|++||||
T Consensus        74 ~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  141 (285)
T cd06648          74 QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDI  141 (285)
T ss_pred             CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            899999999999999999999999999999998876 56899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.82  E-value=7.2e-20  Score=135.47  Aligned_cols=125  Identities=18%  Similarity=0.303  Sum_probs=103.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..|.+.+.||.|+||.||+|.+..+     +..+|+|.+...........+..|..++..                    
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~--------------------   64 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR--------------------   64 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhc--------------------
Confidence            4688899999999999999987543     578999998644322223456677777777                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHH
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~L  167 (177)
                          ++||||+++++.+.+....+++++|+.+++|.+++...                ..++...+..++.|++.||+||
T Consensus        65 ----l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l  140 (283)
T cd05091          65 ----LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL  140 (283)
T ss_pred             ----CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence                89999999999999999999999999999999988532                2378888999999999999999


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |++||+||||
T Consensus       141 H~~gi~H~dl  150 (283)
T cd05091         141 SSHHVVHKDL  150 (283)
T ss_pred             HHcCcccccc
Confidence            9999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.82  E-value=1.9e-19  Score=133.22  Aligned_cols=125  Identities=22%  Similarity=0.383  Sum_probs=105.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+|.+.+.||.|+||.||++...     .++..+++|.+.... ......+.+|+.++..                   
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~-------------------   63 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTV-------------------   63 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhc-------------------
Confidence            457889999999999999999753     345678888875332 2223567788888887                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG---------------SYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~L  167 (177)
                           ++|+||+++++++......+++|||+++++|.+++....               .+++..+..++.||+.|++||
T Consensus        64 -----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L  138 (280)
T cd05092          64 -----LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL  138 (280)
T ss_pred             -----CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH
Confidence                 889999999999999899999999999999999987543               378899999999999999999


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |++|++||||
T Consensus       139 H~~~i~H~dl  148 (280)
T cd05092         139 ASLHFVHRDL  148 (280)
T ss_pred             HHCCeecccc
Confidence            9999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.82  E-value=1.5e-19  Score=135.22  Aligned_cols=124  Identities=21%  Similarity=0.307  Sum_probs=102.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCc----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ++|+..+.||.|+||.||++.+..++.    .+++|.+...........+..|+.++..                     
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~---------------------   65 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS---------------------   65 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHh---------------------
Confidence            478899999999999999999887765    4688877543222222356677777777                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++++... ..+++++++++|+|.+++.... .+++..+..++.|++.||.|||++||+|+||
T Consensus        66 ---l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~di  135 (303)
T cd05110          66 ---MDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDL  135 (303)
T ss_pred             ---CCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccc
Confidence               8999999999988654 4678999999999999987654 5889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.82  E-value=2.3e-19  Score=133.46  Aligned_cols=125  Identities=23%  Similarity=0.393  Sum_probs=104.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+.|.+.+.||.|+||.||++.+..     +...+++|.+..... .....+.+|+.++..                   
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~-------------------   63 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTN-------------------   63 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhc-------------------
Confidence            3579999999999999999998643     345688888643221 122457788888887                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~  166 (177)
                           ++|+||+++++.+......+++|||+++++|.+++...+                .+++..+..++.||+.||+|
T Consensus        64 -----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~  138 (291)
T cd05094          64 -----LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY  138 (291)
T ss_pred             -----CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence                 899999999999999999999999999999999987543                37889999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||++||+||||
T Consensus       139 lH~~~i~H~dl  149 (291)
T cd05094         139 LASQHFVHRDL  149 (291)
T ss_pred             HHhCCeeeccc
Confidence            99999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.82  E-value=1.7e-19  Score=131.61  Aligned_cols=118  Identities=25%  Similarity=0.410  Sum_probs=101.1

Q ss_pred             eeecccceeEEEEEEEec-CC--cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRE-NG--TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~-~~--~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||.|++|.||++.+.. .+  ..+++|.+...........+..|+.+++.                        ++|+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~   56 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS------------------------LDHE   56 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhh------------------------cCCC
Confidence            468999999999999865 33  36899998665433334567788888888                        8999


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.+.+ ..++++||++++++|.+.+..+.  .+++..+..++.|++.||+|||++|++|+||
T Consensus        57 ~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di  123 (257)
T cd05040          57 NLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDL  123 (257)
T ss_pred             CccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            99999999988 88999999999999999987654  5889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.82  E-value=2e-19  Score=131.46  Aligned_cols=117  Identities=29%  Similarity=0.426  Sum_probs=98.7

Q ss_pred             eecccceeEEEEEEEe--cCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         36 LLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      .||.|+||.||+|.+.  .++..+++|++....... ....+..|+.++..                        ++|+|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~~   57 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQ------------------------LDNPY   57 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHh------------------------CCCCC
Confidence            5899999999999753  567899999885433211 23456778888888                        89999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+++++++. ....+++||++++++|.+++.....+++..+..++.|++.||+|||++||+||||
T Consensus        58 i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl  121 (257)
T cd05116          58 IVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDL  121 (257)
T ss_pred             cceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            999998875 4567899999999999999987777999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.82  E-value=4.6e-19  Score=131.05  Aligned_cols=122  Identities=29%  Similarity=0.472  Sum_probs=106.1

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |.+.+.||.|++|.||+|.+..+++.+++|.+..... ......+.+|+.+++.                        +.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   56 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQK------------------------LR   56 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHh------------------------cc
Confidence            6789999999999999999999999999999976531 1223456778888888                        88


Q ss_pred             CCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+...  +..+++|||+++ +|.+++... ..+++..+..++.||+.||+|||+.|++|+||
T Consensus        57 ~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl  126 (287)
T cd07840          57 HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDI  126 (287)
T ss_pred             CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence            99999999999887  899999999964 888888655 46999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0666|consensus

Probab=99.82  E-value=6.9e-21  Score=138.18  Aligned_cols=125  Identities=24%  Similarity=0.388  Sum_probs=104.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC----cEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG----TMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...|.....||+|+||.||+|..+.++    ..+|+|.+..... .+-.....+|+.+++.                   
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE-------------------   83 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE-------------------   83 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH-------------------
Confidence            347999999999999999999766543    3789998864422 1234677899999998                   


Q ss_pred             cccccCCCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        103 KDKERLTHPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK-----GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                           +.|+|++++...|.. +..+|+++||.+. +|+++++-.     ..++...++.+++||++|+.|||++.|+|||
T Consensus        84 -----l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRD  157 (438)
T KOG0666|consen   84 -----LKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRD  157 (438)
T ss_pred             -----hcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeecc
Confidence                 899999999998876 7889999999987 999988622     3489999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       158 L  158 (438)
T KOG0666|consen  158 L  158 (438)
T ss_pred             C
Confidence            7

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.82  E-value=2.7e-19  Score=131.59  Aligned_cols=118  Identities=21%  Similarity=0.254  Sum_probs=94.5

Q ss_pred             eecccceeEEEEEEEecC--CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         36 LLGTGAFSEVRLAESREN--GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .||.|+||.||++.....  ...+++|.+...........+.+|..++..                        ++|||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~------------------------l~h~~i   57 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRI------------------------LQHPNI   57 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhc------------------------cCCcch
Confidence            589999999999976533  234566665433222233456777777776                        899999


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +++++.+.+....|++|||+++++|.+++...    ...+...+..++.||+.||+|||+.+++||||
T Consensus        58 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di  125 (268)
T cd05086          58 LQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL  125 (268)
T ss_pred             hheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            99999999999999999999999999998753    23567778899999999999999999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.82  E-value=3e-19  Score=129.90  Aligned_cols=118  Identities=27%  Similarity=0.424  Sum_probs=102.5

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      +.||.|+||.||++.+.. ++.+++|.+...........+..|+.+++.                        ++|+||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~------------------------l~~~~i~   55 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQ------------------------YDHPNIV   55 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHh------------------------CCCCCeE
Confidence            468999999999999887 899999988654333233567788888888                        8999999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++++.+....+++||++++++|.+++... ..++...+..++.|++.+|.|||++|++||||
T Consensus        56 ~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di  119 (251)
T cd05041          56 KLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDL  119 (251)
T ss_pred             EEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhc
Confidence            9999999999999999999999999998653 45889999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.82  E-value=1.2e-19  Score=134.10  Aligned_cols=122  Identities=31%  Similarity=0.567  Sum_probs=103.6

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC-
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT-  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  109 (177)
                      |.+.+.||.|++|.||+|....+++.+++|.+.............+|+..+..                        +. 
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~------------------------~~~   56 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRK------------------------LNE   56 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHh------------------------ccC
Confidence            67889999999999999999988999999987543322122234456666666                        67 


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+.+++..+++||++ +++|.+.+....  .++...+..++.|++.+|.|||++|++|+||
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl  125 (283)
T cd07830          57 HPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL  125 (283)
T ss_pred             CCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            999999999999999999999999 779999887654  6899999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG1035|consensus

Probab=99.82  E-value=1.1e-20  Score=156.02  Aligned_cols=124  Identities=28%  Similarity=0.431  Sum_probs=102.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|...+.||+|+||.|++++.+-+|+.||||.|+..........+.+|+.++.+                        ++
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LAr------------------------Ln  535 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLAR------------------------LN  535 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhh------------------------cC
Confidence            466788999999999999999999999999999877644445778899999998                        66


Q ss_pred             CCCceeeEEEE---------------------------------------------------------------------
Q psy13106        110 HPNIVQLIETF---------------------------------------------------------------------  120 (177)
Q Consensus       110 h~~i~~~~~~~---------------------------------------------------------------------  120 (177)
                      |||+++++..|                                                                     
T Consensus       536 HpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~  615 (1351)
T KOG1035|consen  536 HPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESS  615 (1351)
T ss_pred             CcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCcccccccccccccccc
Confidence            66666666655                                                                     


Q ss_pred             --------------------------------------------------ecCCeEEEEEeccCCcchhHHHHhcCCC-C
Q psy13106        121 --------------------------------------------------EDKHKVYLVMELVTGGELFDRIVEKGSY-T  149 (177)
Q Consensus       121 --------------------------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~  149 (177)
                                                                        .....+||.||||+...+.+++.++... .
T Consensus       616 ~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~  695 (1351)
T KOG1035|consen  616 TDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQ  695 (1351)
T ss_pred             CCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchh
Confidence                                                              0003479999999998888888777644 5


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        150 EKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       150 ~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ...++++++||++||.|+|++|||||||
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDL  723 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDL  723 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccC
Confidence            8889999999999999999999999997

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.82  E-value=3.6e-19  Score=129.82  Aligned_cols=120  Identities=26%  Similarity=0.429  Sum_probs=102.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|++.+.||.|+||.||++..  +++.+++|.+....   ....+..|+.++..                        
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~---~~~~~~~e~~~l~~------------------------   55 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV---TAQAFLEETAVMTK------------------------   55 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc---hHHHHHHHHHHHHh------------------------
Confidence            35799999999999999999864  57889999875432   23567788888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+..+ ..+++|||+.+++|.+++....  .++...+..++.|++.||.|||++|++||||
T Consensus        56 ~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl  126 (254)
T cd05083          56 LHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDL  126 (254)
T ss_pred             CCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            8999999999998654 4799999999999999987543  4789999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.8e-19  Score=136.17  Aligned_cols=123  Identities=28%  Similarity=0.445  Sum_probs=107.5

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|++|.||+|.+..+++.+++|.+..... ......+..|+.+++.                        +
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------l   56 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRH------------------------L   56 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHh------------------------c
Confidence            58999999999999999999998899999999865432 2233567788888888                        8


Q ss_pred             CCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|+|++++.+.+....     .+|++|++++ ++|.+++.....+++..+..++.||+.||+|||++||+|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dl  129 (330)
T cd07834          57 RHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDL  129 (330)
T ss_pred             CCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            8999999999987664     7899999996 589998887778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1989|consensus

Probab=99.82  E-value=1.6e-19  Score=145.19  Aligned_cols=124  Identities=27%  Similarity=0.438  Sum_probs=104.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      ++++.+.|..|+|+.||+|.....+..||+|.+-... +..-..+.+|+.+++.++                       +
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-e~~L~~v~~EI~~MK~L~-----------------------g   93 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-EEALNAVKREIDIMKLLS-----------------------G   93 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC-HHHHHHHHHHHHHHHHhc-----------------------C
Confidence            6788999999999999999999888999999875442 233467889999999953                       6


Q ss_pred             CCCceeeEEEE-ec---C---CeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCC
Q psy13106        110 HPNIVQLIETF-ED---K---HKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEAR--YLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~-~~---~---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~Dl  177 (177)
                      |+||+.+++.. ..   +   -.++|.||||.||.|.+++..+  ..|++.+++.|+.|+++|+.+||...  ||||||
T Consensus        94 h~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDL  172 (738)
T KOG1989|consen   94 HKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDL  172 (738)
T ss_pred             CCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhh
Confidence            99999999932 21   1   2488999999999999999744  34999999999999999999999999  999998

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.81  E-value=6.4e-19  Score=132.67  Aligned_cols=127  Identities=22%  Similarity=0.380  Sum_probs=106.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....|...+.||.|+||.||++.+..++..+++|.+.......  ....+..|+.+++.                    
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~--------------------   81 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR--------------------   81 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHh--------------------
Confidence            34445888999999999999999999899999999986432221  12456778888887                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+|++++++++.+....+++|||+.+ ++.+.+.. ..++++..+..++.|++.||.|||++||+|+||
T Consensus        82 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL  151 (317)
T cd06635          82 ----IKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  151 (317)
T ss_pred             ----CCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                8999999999999999999999999965 77776653 456899999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.81  E-value=7.3e-19  Score=128.32  Aligned_cols=121  Identities=27%  Similarity=0.457  Sum_probs=102.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||++...  +..+++|.+....   ....+..|+.+++.                        
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~e~~~l~~------------------------   55 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA---TAQAFLAEASVMTQ------------------------   55 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc---hHHHHHHHHHHHHh------------------------
Confidence            357999999999999999999765  7789999874322   23457788888888                        


Q ss_pred             CCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+|++++++.+. .++..+++|||+++++|.+++....  .+++..+..++.|++.||+|||++|++||||
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  128 (256)
T cd05082          56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDL  128 (256)
T ss_pred             CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecccc
Confidence            88999999998754 5567999999999999999987654  3788999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=5.7e-19  Score=132.12  Aligned_cols=127  Identities=30%  Similarity=0.426  Sum_probs=105.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||.|+||.||++.+..+++.+++|.+........ .....+|+.+++.                     
T Consensus         5 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~---------------------   63 (311)
T cd07866           5 SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKK---------------------   63 (311)
T ss_pred             cccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHh---------------------
Confidence            346789999999999999999999999999999999865433222 2355678888888                     


Q ss_pred             cccCCCCCceeeEEEEecC--------CeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        105 KERLTHPNIVQLIETFEDK--------HKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                         ++|+||+++++.+.+.        ..++++|+|+.+ ++...+.. ...+++..+..++.|++.||+|||++||+|+
T Consensus        64 ---l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~  139 (311)
T cd07866          64 ---LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHR  139 (311)
T ss_pred             ---cCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence               8999999999877533        357999999954 67776654 3469999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       140 dl  141 (311)
T cd07866         140 DI  141 (311)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.5e-19  Score=130.08  Aligned_cols=117  Identities=31%  Similarity=0.633  Sum_probs=104.5

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ||.|+||.||.+.+..+++.+++|.+.......  ....+..|+.+++.                        ++|+|++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~~i~   56 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSR------------------------INHPFIV   56 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHH------------------------cCCCcHH
Confidence            689999999999999889999999987654322  23467778888888                        8899999


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++.+..++.++++||++++++|.+++.....+++..+..++.|++.||.|||+.|++|+||
T Consensus        57 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l  119 (250)
T cd05123          57 KLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL  119 (250)
T ss_pred             HHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence            999999999999999999999999999988777999999999999999999999999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0608|consensus

Probab=99.81  E-value=6.6e-20  Score=143.74  Aligned_cols=127  Identities=22%  Similarity=0.462  Sum_probs=113.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      -...|..++.||-|+||+|.+++...|...||+|.+.+...-  +......+|..||..                     
T Consensus       627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAE---------------------  685 (1034)
T KOG0608|consen  627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAE---------------------  685 (1034)
T ss_pred             cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhh---------------------
Confidence            344688999999999999999999999999999998765332  223456778888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .+++.|+++|-.|.+.+.+|+||+|++||++-.+|.+-+.|+++.++.|+.++.+|+++.|..|+|||||
T Consensus       686 ---ADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDi  755 (1034)
T KOG0608|consen  686 ---ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDI  755 (1034)
T ss_pred             ---cCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceeccc
Confidence               7999999999999999999999999999999999999999999999999999999999999999999997

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.81  E-value=3.5e-19  Score=130.97  Aligned_cols=123  Identities=15%  Similarity=0.310  Sum_probs=98.1

Q ss_pred             eEEEeeecccceeEEEEEEEecCCc--EEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGT--MFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~--~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      |.+.+.||.|+||.||+|.+..++.  .+|+|.+...... .....+..|..++..                        
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~------------------------   56 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKE------------------------   56 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHh------------------------
Confidence            3567899999999999999877665  6899987543221 123456778888887                        


Q ss_pred             CCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        108 LTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVE------KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                      ++|+||+++++.+..      ....+++|||+.+++|.+++..      ...+++..+..++.|++.||+|||++||+||
T Consensus        57 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~  136 (272)
T cd05075          57 FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHR  136 (272)
T ss_pred             CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            899999999987532      1357899999999999987742      1237899999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       137 dl  138 (272)
T cd05075         137 DL  138 (272)
T ss_pred             cc
Confidence            97

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.81  E-value=1.6e-19  Score=131.96  Aligned_cols=124  Identities=25%  Similarity=0.449  Sum_probs=103.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc----ccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK----GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +|.+.+.||.|+||.||++.+...+..+++|++......    ........|..+++.                      
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----------------------   58 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSK----------------------   58 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHh----------------------
Confidence            589999999999999999999887777777776432211    112345567777777                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++|||++++++++.+....+++|||+++++|.+++..    ...+++..+..++.|++.||.|||+.|++|+||
T Consensus        59 --l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l  132 (260)
T cd08222          59 --LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDL  132 (260)
T ss_pred             --CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCC
Confidence              8999999999999988899999999999999887753    345899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.81  E-value=8.1e-19  Score=133.62  Aligned_cols=126  Identities=25%  Similarity=0.457  Sum_probs=104.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||+|+||.||++.+..+++.||+|.+....... ....+.+|+.++..                     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~---------------------   72 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH---------------------   72 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHH---------------------
Confidence            34578999999999999999999999899999999886432111 12456678888888                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+||+++++.+...      +..|++++++ +++|.+++... .+++..+..++.|++.||+|||++||+||||
T Consensus        73 ---l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  146 (345)
T cd07877          73 ---MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDL  146 (345)
T ss_pred             ---cCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence               8999999999987532      4578888887 77998877554 5899999999999999999999999999997

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA02988 hypothetical protein; Provisional

Probab=99.81  E-value=8.4e-19  Score=130.15  Aligned_cols=117  Identities=20%  Similarity=0.165  Sum_probs=100.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      ..|+.|+++.||+|..  +++.+|||.+........  ...+.+|+.++.+                        ++|||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~------------------------l~h~n   79 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRR------------------------IDSNN   79 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHh------------------------cCCCC
Confidence            4689999999999987  588999999865432111  2456689999988                        89999


Q ss_pred             ceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        113 IVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      |+++++++.+    ...++++|||+++|+|.+++...+.++......++.|++.||.|||+ .+++||||
T Consensus        80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdl  149 (283)
T PHA02988         80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNL  149 (283)
T ss_pred             EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcC
Confidence            9999999876    45789999999999999999888789999999999999999999998 59999997

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.81  E-value=9.4e-19  Score=131.56  Aligned_cols=127  Identities=24%  Similarity=0.396  Sum_probs=106.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.|...+.||.|+||.||+|.+..+++.+++|.+.......  ....+..|+.+++.                    
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~--------------------   77 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ--------------------   77 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHh--------------------
Confidence            44556888889999999999999999899999999986543221  12456778888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+|++++++++.+....|++|||+. +++.+++.. ..++++..+..++.||+.+|.|||++|++|+||
T Consensus        78 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl  147 (313)
T cd06633          78 ----LKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDI  147 (313)
T ss_pred             ----CCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence                889999999999999999999999995 577777654 456899999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.81  E-value=2.2e-19  Score=131.86  Aligned_cols=118  Identities=25%  Similarity=0.415  Sum_probs=99.5

Q ss_pred             eecccceeEEEEEEEecCC------cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         36 LLGTGAFSEVRLAESRENG------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .||.|+||.||+|......      +.+++|.+...........+.+|+.+++.                        ++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   57 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSN------------------------FN   57 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHh------------------------cC
Confidence            6899999999999986443      68999987544322334567778888887                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||||+++++++......+++||++++++|.+++...       ..+++..+..++.|++.||+|||+.+++|+||
T Consensus        58 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl  132 (269)
T cd05044          58 HPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDL  132 (269)
T ss_pred             CCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            999999999999889999999999999999998642       23778999999999999999999999999997

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.81  E-value=3.2e-19  Score=135.32  Aligned_cols=126  Identities=27%  Similarity=0.411  Sum_probs=105.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.+++|.+...... .....+..|+.++..                     
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   62 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQE---------------------   62 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHH---------------------
Confidence            4567899999999999999999999988999999987543211 122446678888887                     


Q ss_pred             cccC-CCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERL-THPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~-~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         + +|+||+++++++..  ...+|++||+++ ++|.+++... .+++.....++.||+.||.|||++||+||||
T Consensus        63 ---l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl  133 (337)
T cd07852          63 ---LGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDL  133 (337)
T ss_pred             ---hcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence               7 89999999998864  346899999996 5998888765 6889999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0577|consensus

Probab=99.81  E-value=8.8e-21  Score=147.61  Aligned_cols=135  Identities=21%  Similarity=0.345  Sum_probs=112.4

Q ss_pred             CCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhccccccccccc
Q psy13106         18 KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        18 ~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      .+++.-.++....|.-++.||.|+||-||-|++..+.+.||||...-.....  ..+.+..|+..++.            
T Consensus        15 iA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~------------   82 (948)
T KOG0577|consen   15 IADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQ------------   82 (948)
T ss_pred             HHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHh------------
Confidence            3344445555667888899999999999999999999999999875332211  12567788888888            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                                  +.|||++.+-++|......|+|||||- |+-.+++.- .+++.+.++..|..+.+.||+|||+++-||
T Consensus        83 ------------l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IH  149 (948)
T KOG0577|consen   83 ------------LRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIH  149 (948)
T ss_pred             ------------ccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence                        899999999999999999999999995 588887753 356999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       150 RDi  152 (948)
T KOG0577|consen  150 RDI  152 (948)
T ss_pred             hhc
Confidence            997

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=4e-19  Score=141.40  Aligned_cols=129  Identities=22%  Similarity=0.355  Sum_probs=95.5

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCC-cEEEEEEE--------------eccccc--ccchhHHHHHHHHHhhcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENG-TMFAVKII--------------DKKALK--GKEDSLENEIKVLRRFSQ   86 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-~~~avK~i--------------~~~~~~--~~~~~~~~e~~~~~~~~~   86 (177)
                      ++.+.++|.+.+.||.|+||.||+|..+... ...+.|.+              .+....  .....+.+|+.++..   
T Consensus       143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~---  219 (501)
T PHA03210        143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR---  219 (501)
T ss_pred             chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh---
Confidence            3455678999999999999999998865432 22222211              000000  112345678888887   


Q ss_pred             cccccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-----CCCCHHHHHHHHHHHH
Q psy13106         87 SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-----GSYTEKDASMLIRQVL  161 (177)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~  161 (177)
                                           ++|+||+++++++...+..|++++++ +++|.+++...     .......++.++.||+
T Consensus       220 ---------------------l~HpnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~  277 (501)
T PHA03210        220 ---------------------LNHENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLL  277 (501)
T ss_pred             ---------------------CCCCCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHH
Confidence                                 89999999999999999999999999 45787776532     1234677889999999


Q ss_pred             HHHHHHHhCCccccCC
Q psy13106        162 EAVDYMHEARYLSKPR  177 (177)
Q Consensus       162 ~~l~~LH~~giiH~Dl  177 (177)
                      .||.|||++|||||||
T Consensus       278 ~aL~yLH~~gIiHrDL  293 (501)
T PHA03210        278 CAVEYIHDKKLIHRDI  293 (501)
T ss_pred             HHHHHHHhCCeecCCC
Confidence            9999999999999997

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.81  E-value=1.5e-18  Score=130.29  Aligned_cols=116  Identities=25%  Similarity=0.422  Sum_probs=95.1

Q ss_pred             EeeecccceeEEEEEEEec--CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         34 KELLGTGAFSEVRLAESRE--NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      ..+||.|+||.||+|....  ++..+|+|.+....   ....+.+|+.+++.                        ++||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~------------------------l~h~   58 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRE------------------------LKHP   58 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHh------------------------CCCC
Confidence            4689999999999999754  56789999875332   23456788988988                        8999


Q ss_pred             CceeeEEEEe--cCCeEEEEEeccCCcchhHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFE--DKHKVYLVMELVTGGELFDRIVEK---------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++++.  .+..++++|||+. ++|.+++...         ..+++..++.++.||+.||.|||++||+||||
T Consensus        59 niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dl  134 (317)
T cd07867          59 NVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDL  134 (317)
T ss_pred             CeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence            9999999885  4567899999995 4787776421         24788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=5e-19  Score=134.55  Aligned_cols=118  Identities=20%  Similarity=0.176  Sum_probs=90.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-CCcEEEEEEEecccc----cccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKAL----KGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~~----~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +.+.+.|.+.+.||+|+||+||+|.+.. +++.+|||.+.....    ......+.+|+.++..                
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~----------------   77 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKT----------------   77 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHh----------------
Confidence            3456689999999999999999998876 677789998753211    1123457899999998                


Q ss_pred             CcccccccCCCCCcee-eEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQ-LIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++|+|++. +++.    +..|++|||++|++|.. +..   ..   ...++.|++.+|.|||++||+||||
T Consensus        78 --------L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL  137 (365)
T PRK09188         78 --------VRGIGVVPQLLAT----GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDL  137 (365)
T ss_pred             --------ccCCCCCcEEEEc----CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCC
Confidence                    88999885 4432    45799999999988863 211   11   1467899999999999999999997

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.80  E-value=6.2e-19  Score=127.55  Aligned_cols=108  Identities=20%  Similarity=0.290  Sum_probs=93.6

Q ss_pred             cceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEE
Q psy13106         40 GAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET  119 (177)
Q Consensus        40 g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~  119 (177)
                      |.+|.||++.+..+++.+++|.+....      ....|...+..                        ..|||++++++.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~------------------------~~~~~i~~~~~~   53 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIP------------------------HCVPNMVCLHKY   53 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHh------------------------cCCCceeehhhh
Confidence            889999999999999999999986542      12223333333                        569999999999


Q ss_pred             EecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       120 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.+....+++|||+++++|.+++.....+++..+..++.|++.||+|||++||+||||
T Consensus        54 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl  111 (237)
T cd05576          54 IVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDL  111 (237)
T ss_pred             eecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            9999999999999999999999987777999999999999999999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.80  E-value=5.1e-19  Score=131.83  Aligned_cols=122  Identities=23%  Similarity=0.386  Sum_probs=104.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.....||.|+||.||++....+++.+++|.+.... ......+..|+.+++.                        ++
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~------------------------l~   75 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRD------------------------YQ   75 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHh------------------------cC
Confidence            4445578999999999999999999999999875332 1233456778888887                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+..++..+++|||+++++|.+++.. ..+++..+..++.|++.||+|||+.|++|+||
T Consensus        76 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl  142 (292)
T cd06657          76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI  142 (292)
T ss_pred             CcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999999999999999999999999999987644 45899999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.80  E-value=2e-18  Score=127.75  Aligned_cols=125  Identities=26%  Similarity=0.380  Sum_probs=103.2

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |.+.+.||.|+||.||++.+..+++.+++|.+....... .......|+.++..+..                     ++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---------------------~~   59 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---------------------FE   59 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---------------------cC
Confidence            678999999999999999999889999999986543221 12345567777766432                     57


Q ss_pred             CCCceeeEEEEecCCe-----EEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHK-----VYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+.....     ++++||++++ +|.+++....  .+++..+..++.|++.||.|||+.|++|+||
T Consensus        60 h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l  133 (287)
T cd07838          60 HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL  133 (287)
T ss_pred             CCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            9999999999987766     9999999964 8888876543  4899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0604|consensus

Probab=99.80  E-value=5.4e-20  Score=132.87  Aligned_cols=126  Identities=31%  Similarity=0.541  Sum_probs=105.2

Q ss_pred             cCcccccceEEE-eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILK-ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.++|.+- ++||.|-.|.|..|.++++++.+|+|++.      ......+|+++....                 
T Consensus        55 k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~------Ds~KARrEVeLHw~~-----------------  111 (400)
T KOG0604|consen   55 KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL------DSPKARREVELHWMA-----------------  111 (400)
T ss_pred             hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHh------cCHHHHhHhhhhhhh-----------------
Confidence            444466778764 46999999999999999999999999873      223455676655543                 


Q ss_pred             ccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        102 DKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                            -.||||+++++.|+.    ...+.+|||+++||.|+..+.+++.  ++++++..++.||..|+.|||+.+|.||
T Consensus       112 ------s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHR  185 (400)
T KOG0604|consen  112 ------SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHR  185 (400)
T ss_pred             ------cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhc
Confidence                  379999999998863    3568899999999999999988765  9999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       186 Dl  187 (400)
T KOG0604|consen  186 DL  187 (400)
T ss_pred             cC
Confidence            97

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.80  E-value=1.8e-18  Score=130.95  Aligned_cols=123  Identities=28%  Similarity=0.345  Sum_probs=102.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecC--CcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESREN--GTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~--~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +|.+.+.||.|+||.||++.+..+  +..+|+|.+....... ....+..|+.+++.                       
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-----------------------   57 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRH-----------------------   57 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHH-----------------------
Confidence            488999999999999999999877  8899999986432111 12456678888877                       


Q ss_pred             cC-CCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RL-THPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       + +|+||+++++....    ...++++|+++. ++|.+.+.....+++..++.++.||+.||+|||++||+||||
T Consensus        58 -l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dl  131 (332)
T cd07857          58 -FRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDL  131 (332)
T ss_pred             -hcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence             4 69999999986532    246889999985 689999887778999999999999999999999999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0579|consensus

Probab=99.80  E-value=4e-21  Score=150.71  Aligned_cols=127  Identities=26%  Similarity=0.450  Sum_probs=110.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+.|.++..||.|+||.||+|..+.++-..|.|+|..... ..-..+..|+.++..                      
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse-EELEDylVEIeILa~----------------------   85 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE-EELEDYLVEIEILAE----------------------   85 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch-hHHhhhhhhhhhhhc----------------------
Confidence            344578899999999999999999998888889998865432 223566788899988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||+|+++++.|...+.+|+..|||.||-...++...+ .+.++++..+.+|+++||.|||+++||||||
T Consensus        86 --CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDL  156 (1187)
T KOG0579|consen   86 --CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDL  156 (1187)
T ss_pred             --CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhc
Confidence              999999999999998999999999999998888776654 4999999999999999999999999999997

>KOG1094|consensus

Probab=99.80  E-value=1.9e-19  Score=139.86  Aligned_cols=127  Identities=25%  Similarity=0.407  Sum_probs=109.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+...++++||.|.||.|.+|+-.. ...||||.++..........+..|++++.+                      
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsq----------------------  591 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSR----------------------  591 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhc----------------------
Confidence            344567889999999999999998664 689999999766655555788999999998                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.||||+.+.+....++.+++++||++.|+|.+++..+..  .......++..||+.||+||.+.++|||||
T Consensus       592 --LkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~  663 (807)
T KOG1094|consen  592 --LKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDL  663 (807)
T ss_pred             --cCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccc
Confidence              8999999999999999999999999999999999987742  344455579999999999999999999997

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.80  E-value=5.1e-19  Score=130.56  Aligned_cols=122  Identities=29%  Similarity=0.472  Sum_probs=106.7

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |.+.+.||.|.+|.||+|....+++.+++|.+...... .....+..|+.+++.                        ++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------~~   56 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE------------------------LK   56 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh------------------------cC
Confidence            66788999999999999999999999999998765321 223556778888887                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+.+...++++||+++ ++|.+++... ..+++..+..++.|++.||+|||++||+|+||
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l  124 (282)
T cd07829          57 HPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDL  124 (282)
T ss_pred             CCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9999999999999999999999996 5899998776 56999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.80  E-value=1.9e-18  Score=128.82  Aligned_cols=130  Identities=18%  Similarity=0.268  Sum_probs=105.1

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....+.|.+.+.||.|++|.||++.+..+++.++||.+...........+..|+.++...                   
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~-------------------   70 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS-------------------   70 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc-------------------
Confidence            3445568999999999999999999999889999999986543322334455566555441                   


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                          .+|+||+++++++.+....|++||++. +++..++.. ...+++..+..++.||+.||+|||+ .||+||||
T Consensus        71 ----~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl  141 (296)
T cd06618          71 ----HDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDV  141 (296)
T ss_pred             ----cCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCC
Confidence                469999999999999999999999984 467766654 3468899999999999999999997 69999997

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG4645|consensus

Probab=99.80  E-value=2.2e-20  Score=155.27  Aligned_cols=126  Identities=27%  Similarity=0.412  Sum_probs=112.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .-+|+..-+||.|.||.||-|....+|+..|+|.|....... ....+..|..++..                       
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~----------------------- 1290 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEG----------------------- 1290 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHh-----------------------
Confidence            346777889999999999999999999999999997554332 23667888999988                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++|+.-..+..++|.||||.+|+|.+.+...+..++...+.+..|++.|+.|||++|||||||
T Consensus      1291 -lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDI 1360 (1509)
T KOG4645|consen 1291 -LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDI 1360 (1509)
T ss_pred             -ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence             8999999999999899999999999999999999987777999999999999999999999999999997

>KOG0587|consensus

Probab=99.80  E-value=2.1e-18  Score=138.96  Aligned_cols=129  Identities=22%  Similarity=0.489  Sum_probs=111.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      -+...+.|.+.+.||.|++|.||++..+.+++..|+|+.....  ....+++.|.++++..                   
T Consensus        14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~-------------------   72 (953)
T KOG0587|consen   14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKY-------------------   72 (953)
T ss_pred             CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhc-------------------
Confidence            3445668999999999999999999999999999999975433  3457788899999885                   


Q ss_pred             ccccCCCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        104 DKERLTHPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                          .+|||++.++++|..     ++.+|||||||.+|+..++++.-  ..+.+..+..|+..++.|+.+||.+.+||||
T Consensus        73 ----~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD  148 (953)
T KOG0587|consen   73 ----SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD  148 (953)
T ss_pred             ----cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence                379999999999863     46799999999999999998743  3588999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       149 i  149 (953)
T KOG0587|consen  149 I  149 (953)
T ss_pred             c
Confidence            7

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.79  E-value=1.2e-18  Score=122.15  Aligned_cols=117  Identities=23%  Similarity=0.253  Sum_probs=84.8

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-------------------------hhHHHHHHHHHhhcccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-------------------------DSLENEIKVLRRFSQSV   88 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-------------------------~~~~~e~~~~~~~~~~~   88 (177)
                      ...||+|++|.||+|... +++.||||++.........                         .....|...+..     
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----   75 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKR-----   75 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHH-----
Confidence            357999999999999987 8999999999754321111                         112336666666     


Q ss_pred             cccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHH-
Q psy13106         89 HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM-  167 (177)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~L-  167 (177)
                                         +.++++..+......  ..++||||++++++.........++...+..++.|++.+|.++ 
T Consensus        76 -------------------l~~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~  134 (190)
T cd05147          76 -------------------LVTAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILY  134 (190)
T ss_pred             -------------------HHHCCCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                               444544333222222  2389999998877765544556799999999999999999999 


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |+.||+||||
T Consensus       135 H~~giiHrDl  144 (190)
T cd05147         135 QDCRLVHADL  144 (190)
T ss_pred             HhCCcccCCC
Confidence            7999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=8.6e-19  Score=133.37  Aligned_cols=126  Identities=22%  Similarity=0.452  Sum_probs=105.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|++|.||+|.+..+++.+++|.+....... ....+.+|+.+++.                     
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   70 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH---------------------   70 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHh---------------------
Confidence            45678999999999999999999999999999999885432111 22456678888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCe------EEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHK------VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|+|++++.+.+.....      ++++++++ +++|.+++.. ..+++..+..++.|++.||+|||+.||+||||
T Consensus        71 ---l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dl  144 (343)
T cd07851          71 ---MDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDL  144 (343)
T ss_pred             ---ccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence               889999999887765443      89999999 6799998865 45999999999999999999999999999997

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.79  E-value=1.5e-18  Score=126.99  Aligned_cols=119  Identities=18%  Similarity=0.286  Sum_probs=94.7

Q ss_pred             eeecccceeEEEEEEEec---CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +.||+|+||.||+|.+..   ....+++|.+...........+..|..+++.                        ++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~------------------------l~h~   56 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKD------------------------FSHP   56 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHcc------------------------CCCC
Confidence            368999999999998753   3457999987432211223456677777777                        8999


Q ss_pred             CceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |++++++.+. .++..+++|||+.+++|.+++.... ..+...+..++.|++.||.|||+.|++||||
T Consensus        57 ~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  124 (262)
T cd05058          57 NVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDL  124 (262)
T ss_pred             CcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence            9999999664 4566899999999999999987643 4677888899999999999999999999997

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.79  E-value=2.1e-18  Score=129.37  Aligned_cols=126  Identities=23%  Similarity=0.383  Sum_probs=106.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....|...+.||.|++|.||++.+..+++.+++|.+......  .....+..|+.+++.                     
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~---------------------   71 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK---------------------   71 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHh---------------------
Confidence            445688889999999999999999989999999998643221  122456678888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|++++.+++......+++|||+. +++.+.+.. ..++++..+..++.|++.||.|||+.|++||||
T Consensus        72 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl  141 (308)
T cd06634          72 ---LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV  141 (308)
T ss_pred             ---CCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               889999999999999999999999996 578776653 456899999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4721|consensus

Probab=99.79  E-value=1.5e-19  Score=140.36  Aligned_cols=116  Identities=24%  Similarity=0.346  Sum_probs=101.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+...-++-||+|+.|-||+|+.+  ++.||||.++...        +.++.-+++                        
T Consensus       123 Fe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk--------ETdIKHLRk------------------------  168 (904)
T KOG4721|consen  123 FEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK--------ETDIKHLRK------------------------  168 (904)
T ss_pred             HHHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh--------hhhHHHHHh------------------------
Confidence            333444667999999999999987  7899999763221        346777777                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++|+||+.+.+.+....-+||+||||..|.|...++....+.......|..+|+.||.|||.+.||||||
T Consensus       169 LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDL  238 (904)
T KOG4721|consen  169 LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDL  238 (904)
T ss_pred             ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhcc
Confidence            9999999999999988999999999999999999999888999999999999999999999999999997

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.79  E-value=1.4e-18  Score=128.31  Aligned_cols=122  Identities=27%  Similarity=0.477  Sum_probs=105.4

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      |.+.+.||.|++|.||+|....+++.+++|.+...... .....+..|+.+++.                        ++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------l~   56 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKE------------------------LN   56 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHH------------------------hc
Confidence            56788999999999999999989999999998654332 123456778888888                        88


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+|++++++.+..++.++++|||+++ ++.+++... ..+++..+..++.||+.||.|||+.||+|+||
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl  124 (283)
T cd05118          57 HPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDL  124 (283)
T ss_pred             CCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCc
Confidence            99999999999999999999999965 888877653 56899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0199|consensus

Probab=99.79  E-value=1.8e-19  Score=142.51  Aligned_cols=137  Identities=24%  Similarity=0.341  Sum_probs=115.4

Q ss_pred             CCCCCcccCcccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccc
Q psy13106         16 DGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        16 ~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      .+.......-...+...+.+.||.|.||.|+.|.|...   --.||||++.........+.+.+|+.++.+         
T Consensus        97 ~~p~~~lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~---------  167 (1039)
T KOG0199|consen   97 ANPSIDLKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLK---------  167 (1039)
T ss_pred             CCcCCCcceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHh---------
Confidence            33344444445556778889999999999999999743   246999999766655566889999999988         


Q ss_pred             cccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106         93 DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                                     +.|+|++++|+...+ ..+.+|||.++.|+|.+.+...  ..|.......|+.||+.||.||.++
T Consensus       168 ---------------L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk  231 (1039)
T KOG0199|consen  168 ---------------LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK  231 (1039)
T ss_pred             ---------------ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh
Confidence                           999999999999877 7789999999999999999863  3588899999999999999999999


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      +.|||||
T Consensus       232 rlvHRDL  238 (1039)
T KOG0199|consen  232 RLVHRDL  238 (1039)
T ss_pred             hhhhhhh
Confidence            9999997

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.79  E-value=2.2e-18  Score=129.31  Aligned_cols=113  Identities=27%  Similarity=0.447  Sum_probs=95.3

Q ss_pred             ceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEE
Q psy13106         41 AFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET  119 (177)
Q Consensus        41 ~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~  119 (177)
                      +++.|+.+....+++.+|+|.+..... ......+..|+.+++.                        ++|+||+++++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~------------------------l~h~~i~~~~~~   67 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQ------------------------LQHPNILPYVTS   67 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHh------------------------cCCcchhhhhhe
Confidence            445566666677899999999875422 2233567888888888                        889999999999


Q ss_pred             EecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        120 FEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       120 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +...+.++++|||+++++|.+++...  ..+++..+..++.|++.||+|||++||+||||
T Consensus        68 ~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dl  127 (314)
T cd08216          68 FIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSV  127 (314)
T ss_pred             eecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99999999999999999999988753  34889999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.79  E-value=1.7e-18  Score=128.49  Aligned_cols=124  Identities=22%  Similarity=0.277  Sum_probs=101.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|...+.||.|+||.||++.+..+++.+++|.+...........+..|+.++..                        +
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~------------------------~   59 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMR------------------------S   59 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHH------------------------h
Confidence            3566778999999999999999999999999998654433334556778877777                        5


Q ss_pred             -CCCCceeeEEEEecCCeEEEEEeccCCcchhHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        109 -THPNIVQLIETFEDKHKVYLVMELVTGGELFDRI---V--EKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       109 -~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l---~--~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                       +|+||+++++++...+..+++||++. +++.++.   .  ....+++..+..++.|++.||+|||+ .|++||||
T Consensus        60 ~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dl  134 (288)
T cd06616          60 SDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDV  134 (288)
T ss_pred             cCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCC
Confidence             49999999999998889999999985 4554432   2  23569999999999999999999997 49999997

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.78  E-value=2.9e-18  Score=126.14  Aligned_cols=123  Identities=16%  Similarity=0.358  Sum_probs=98.5

Q ss_pred             eEEEeeecccceeEEEEEEEec---CCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~---~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      |.+.+.||.|+||.||+|.+..   +++.++||.+....... ....+.+|+.+++.                       
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-----------------------   57 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKE-----------------------   57 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhc-----------------------
Confidence            6678899999999999998753   56889999986443221 22456778888887                       


Q ss_pred             cCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        107 RLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEK------GSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                       ++|||++++++.+....      ..+++++|+.+++|.+++...      ..++...+..++.||+.||+|||++||+|
T Consensus        58 -l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H  136 (273)
T cd05074          58 -FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIH  136 (273)
T ss_pred             -CCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence             89999999999875432      247889999999998876432      13788999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       137 ~di  139 (273)
T cd05074         137 RDL  139 (273)
T ss_pred             ccc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.78  E-value=3.4e-18  Score=125.58  Aligned_cols=125  Identities=27%  Similarity=0.478  Sum_probs=101.1

Q ss_pred             ceEEEeeecccceeEEEEEEEec-CCcEEEEEEEecccccc---------cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKALKG---------KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~~~~---------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      .|++.+.||.|+||.||++.+.. +++.+++|.+.......         ....+..|+.++.+.               
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---------------   65 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ---------------   65 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc---------------
Confidence            37888999999999999999987 68899999886432211         112344455555431               


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHE-ARYLS  174 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH  174 (177)
                              ++|+|++++++.+.+++..+++|||+++++|.+++..    ...+++..++.++.|++.||.|||+ .|++|
T Consensus        66 --------~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H  137 (269)
T cd08528          66 --------LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVH  137 (269)
T ss_pred             --------CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceee
Confidence                    6899999999999999999999999999999887743    2358899999999999999999996 78999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      +||
T Consensus       138 ~dl  140 (269)
T cd08528         138 RDL  140 (269)
T ss_pred             cCC
Confidence            997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG2345|consensus

Probab=99.78  E-value=4e-19  Score=125.23  Aligned_cols=127  Identities=24%  Similarity=0.425  Sum_probs=109.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ..+++|++.+.||.|+|+.|+++....+++.||+|.+..... .......+|++..++                      
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~-~~~e~~~rEid~~rk----------------------   74 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ-EDIEEALREIDNHRK----------------------   74 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccch-HHHHHHHHHHHHHHh----------------------
Confidence            346699999999999999999999999999999999977652 344667889998888                      


Q ss_pred             ccCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhc---C-CCCHHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy13106        106 ERLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEK---G-SYTEKDASMLIRQVLEAVDYMHEAR--YLS  174 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~---~-~~~~~~~~~~~~qi~~~l~~LH~~g--iiH  174 (177)
                        ++|||+++++++-...     ...|++++|+-.|+|.+.+...   + -+++.++..|+.+|++||.+||+..  +.|
T Consensus        75 --f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH  152 (302)
T KOG2345|consen   75 --FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAH  152 (302)
T ss_pred             --hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence              7899999988765432     3499999999999999988643   2 4999999999999999999999999  999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       153 ~Di  155 (302)
T KOG2345|consen  153 RDI  155 (302)
T ss_pred             cCC
Confidence            997

>KOG4278|consensus

Probab=99.78  E-value=6.5e-19  Score=138.22  Aligned_cols=129  Identities=21%  Similarity=0.348  Sum_probs=111.6

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+...........+||.|.||.||.|.|++-...+|||.++...  -...++..|..+++.                   
T Consensus       261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--MeveEFLkEAAvMKe-------------------  319 (1157)
T KOG4278|consen  261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKE-------------------  319 (1157)
T ss_pred             hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc--hhHHHHHHHHHHHHh-------------------
Confidence            34444456777889999999999999999999999999874332  234788999999999                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +.|||++++++.+.....+||++|||..|+|.+|+++..+  ++.-....++.||..||+||..+++|||||
T Consensus       320 -----ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDL  391 (1157)
T KOG4278|consen  320 -----IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDL  391 (1157)
T ss_pred             -----hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence                 8999999999999988899999999999999999986543  777778889999999999999999999997

>KOG0695|consensus

Probab=99.78  E-value=2.7e-19  Score=131.50  Aligned_cols=128  Identities=21%  Similarity=0.447  Sum_probs=111.8

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      -...|.+++.||+|+|.+|.+++.+++++.||+|++++.-.+...  +....|-.++...                    
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~a--------------------  307 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--------------------  307 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhc--------------------
Confidence            345799999999999999999999999999999999876544332  4455666666653                    


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         -+||.++.++.+|++...+++|.||.+||+|--.++...+++++.++.+..+|+-||.|||++|||.|||
T Consensus       308 ---sn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdl  377 (593)
T KOG0695|consen  308 ---SNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDL  377 (593)
T ss_pred             ---cCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeec
Confidence               4899999999999999999999999999999877777778999999999999999999999999999997

>KOG0668|consensus

Probab=99.78  E-value=6.9e-20  Score=128.13  Aligned_cols=123  Identities=24%  Similarity=0.387  Sum_probs=106.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....+.|++.+++|+|.|+.||.|....+++.+.||++++-.    ...+.+|+.++..+                    
T Consensus        34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL--------------------   89 (338)
T KOG0668|consen   34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNL--------------------   89 (338)
T ss_pred             ccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhc--------------------
Confidence            345668999999999999999999999999999999986432    35789999999984                    


Q ss_pred             cccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .++|||+++++...++  ....+++|++++.++.++..   .++..+++.++.|++.||.|||++||+|||+
T Consensus        90 ---~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDV  158 (338)
T KOG0668|consen   90 ---RGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDV  158 (338)
T ss_pred             ---cCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccC
Confidence               3699999999999866  44789999999888877653   3788999999999999999999999999995

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.78  E-value=7.1e-18  Score=128.29  Aligned_cols=124  Identities=23%  Similarity=0.415  Sum_probs=101.9

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.++|.+.+.||.|+||.||+|.+..+++.+|+|.+....... ....+.+|+.+++.                      
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~----------------------   70 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH----------------------   70 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh----------------------
Confidence            4568999999999999999999999899999999986432211 22456778888888                      


Q ss_pred             ccCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.|+||+++++++....      .++++|+++. .+|..+.  ...+++..+..++.|++.||+|||++||+||||
T Consensus        71 --l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl  143 (342)
T cd07879          71 --MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDL  143 (342)
T ss_pred             --cCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence              88999999999887542      4699999995 4666654  235899999999999999999999999999997

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0671|consensus

Probab=99.78  E-value=3.5e-19  Score=131.97  Aligned_cols=136  Identities=25%  Similarity=0.367  Sum_probs=113.9

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      -..++.+..+|.++..+|.|+||.|..|.+..++..+|+|+++  ......+....|++++.++...-.           
T Consensus        81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik--~V~kYreAa~iEi~vLqki~~~DP-----------  147 (415)
T KOG0671|consen   81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK--NVDKYREAALIEIEVLQKINESDP-----------  147 (415)
T ss_pred             EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHH--HHHHHhhHHHHHHHHHHHHHhcCC-----------
Confidence            4567788899999999999999999999999999999999984  334455677889999988543200           


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             -+---+++..+||+..++.|+|+|.+ |.++++++..+.  +++.+.++.++.|++.+++|||+.+++|.||
T Consensus       148 -------~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDL  218 (415)
T KOG0671|consen  148 -------NGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDL  218 (415)
T ss_pred             -------CCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCC
Confidence                   01113677788999999999999998 889999998865  5999999999999999999999999999997

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.78  E-value=2.9e-18  Score=145.84  Aligned_cols=116  Identities=22%  Similarity=0.324  Sum_probs=99.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.....||+|+||.||+|.+..++..||||.+....     .....|+.++.+                        ++
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~l~~------------------------l~  741 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-----SIPSSEIADMGK------------------------LQ  741 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-----cccHHHHHHHhh------------------------CC
Confidence            4566678999999999999998899999999875321     122345666766                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH---EARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~giiH~Dl  177 (177)
                      ||||+++++++.+....|+||||+++++|.+++..   ++......++.|++.||+|||   +.+|+||||
T Consensus       742 HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl  809 (968)
T PLN00113        742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNL  809 (968)
T ss_pred             CCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCC
Confidence            99999999999999999999999999999999853   788899999999999999999   679999997

>KOG1163|consensus

Probab=99.77  E-value=7.5e-18  Score=118.75  Aligned_cols=129  Identities=27%  Similarity=0.361  Sum_probs=108.1

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .+.-...+.|.++++||+|+||.+|.|....+++.||||+-...   ....++..|..+...+.                
T Consensus         8 ~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~---a~hpqL~yEskvY~iL~----------------   68 (341)
T KOG1163|consen    8 LEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK---AKHPQLLYESKVYRILQ----------------   68 (341)
T ss_pred             hhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc---CCCcchhHHHHHHHHhc----------------
Confidence            33445567899999999999999999999999999999985332   24466777888877732                


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ....|+.+..++.+..+-.+||+.+ |.+|.+++.- ...++.+++..++.|++.-++|+|.+++|||||
T Consensus        69 -------~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDI  137 (341)
T KOG1163|consen   69 -------GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDI  137 (341)
T ss_pred             -------cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccC
Confidence                   3557888888888889999999999 8899998863 345999999999999999999999999999997

>KOG0196|consensus

Probab=99.77  E-value=1.8e-18  Score=138.15  Aligned_cols=126  Identities=18%  Similarity=0.372  Sum_probs=110.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC---cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .....+.+.||.|.||.|++|+.+..+   ..||||.++..-.+.....+..|..|+-+                     
T Consensus       628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ---------------------  686 (996)
T KOG0196|consen  628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ---------------------  686 (996)
T ss_pred             hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc---------------------
Confidence            345678999999999999999987554   57999999766555556678888888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+.+.+.....+.++|++|||++|+|..+|+.+ +.|..-+..-+++.|+.||+||-+.|+|||||
T Consensus       687 ---FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDL  757 (996)
T KOG0196|consen  687 ---FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDL  757 (996)
T ss_pred             ---CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhh
Confidence               78999999999999999999999999999999999855 56888888899999999999999999999997

>KOG1151|consensus

Probab=99.77  E-value=2.2e-19  Score=136.08  Aligned_cols=133  Identities=28%  Similarity=0.402  Sum_probs=112.0

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc------cchhHHHHHHHHHhhcccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~------~~~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      ....+.+.++|.++..||+|+|+.||+|.+....+.+|||+-.....+.      ......+|.++.+.           
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKe-----------  523 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKE-----------  523 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhc-----------
Confidence            3456788899999999999999999999999999999999854322111      11334556666666           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR--  171 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g--  171 (177)
                                   ++||.|+++|++|. +...+|-|+|||+|-+|.-+++.+..+++++++.|+-||+.||.||.+..  
T Consensus       524 -------------LDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpP  590 (775)
T KOG1151|consen  524 -------------LDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPP  590 (775)
T ss_pred             -------------cCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCC
Confidence                         99999999999997 67789999999999999999999888999999999999999999999975  


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |||=||
T Consensus       591 IIHYDL  596 (775)
T KOG1151|consen  591 IIHYDL  596 (775)
T ss_pred             eeeecc
Confidence            899886

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.76  E-value=2.5e-17  Score=117.41  Aligned_cols=123  Identities=40%  Similarity=0.735  Sum_probs=108.2

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      |.+.+.||.|++|.||++....+++.+++|.+...........+..|+..+..                        ++|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~------------------------~~~   56 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKK------------------------LKH   56 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHh------------------------CCC
Confidence            56788999999999999999988899999998754432134567778888887                        789


Q ss_pred             CCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        111 PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       111 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +|++++++.+......++++|++++++|.+++..... +++..+..++.+++.++.+||+.|++|+||
T Consensus        57 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di  124 (225)
T smart00221       57 PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDL  124 (225)
T ss_pred             CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            9999999999988999999999999999999987666 899999999999999999999999999996

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.76  E-value=4.5e-17  Score=121.44  Aligned_cols=142  Identities=14%  Similarity=0.139  Sum_probs=95.6

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ....+...++|.+.+.||+|+||.||+|.+..+   ...+++|......     .....|...+.....         ..
T Consensus         4 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~e~~~~~~~~~---------~~   69 (294)
T PHA02882          4 IPLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN-----ETIVMETLVYNNIYD---------ID   69 (294)
T ss_pred             eeeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC-----CchhhHHHHHHhhhh---------HH
Confidence            344556678999999999999999999998877   6677777643221     111112111111000         00


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                      ..........+.|++++++++.+....    ..+++|+++ ..++.+.+......++..+..++.|++.||+|||++||+
T Consensus        70 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii  148 (294)
T PHA02882         70 KIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGIS  148 (294)
T ss_pred             HHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            000011112278999999998765432    457788877 346777666555578899999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       149 HrDi  152 (294)
T PHA02882        149 HGDI  152 (294)
T ss_pred             cCCC
Confidence            9997

>KOG0576|consensus

Probab=99.75  E-value=1.4e-19  Score=142.24  Aligned_cols=127  Identities=25%  Similarity=0.488  Sum_probs=112.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.++..+|+|+||.||+++++.+++..|+|+++... ......+..|+-+++.                      
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~d----------------------   68 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRD----------------------   68 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC-Cccccccccceeeeec----------------------
Confidence            44568999999999999999999999999999999996543 2233445566666666                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ..||||+.+++.+..+..+|+.||||.+|+|.+.-.--+++++.++....++.+.||+|||+.|-+||||
T Consensus        69 --c~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdi  138 (829)
T KOG0576|consen   69 --CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDI  138 (829)
T ss_pred             --CCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccc
Confidence              8999999999999999999999999999999998877888999999999999999999999999999997

>KOG4257|consensus

Probab=99.75  E-value=5.7e-18  Score=132.77  Aligned_cols=122  Identities=24%  Similarity=0.422  Sum_probs=103.0

Q ss_pred             eEEEeeecccceeEEEEEEEecC----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESREN----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.+.||.|.||.||.|.....    .--||||.-+........+.+..|..+++.                       
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrn-----------------------  447 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRN-----------------------  447 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHh-----------------------
Confidence            44566799999999999997643    335788875544444455778899999999                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++... ....|+|||.++-|.|..++..++ .++......+..||+.+|.|||+.++|||||
T Consensus       448 -fdHphIikLIGv~~-e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDI  517 (974)
T KOG4257|consen  448 -FDHPHIIKLIGVCV-EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDI  517 (974)
T ss_pred             -CCCcchhheeeeee-ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhh
Confidence             89999999999885 467899999999999999998765 4888889999999999999999999999997

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.75  E-value=2.5e-17  Score=115.52  Aligned_cols=117  Identities=24%  Similarity=0.243  Sum_probs=85.0

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccc-------------------------hhHHHHHHHHHhhcccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-------------------------DSLENEIKVLRRFSQSV   88 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-------------------------~~~~~e~~~~~~~~~~~   88 (177)
                      .+.||+|++|.||+|.+. +++.||||++.........                         .....|...+..     
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----   75 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR-----   75 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH-----
Confidence            468999999999999987 8999999998765311000                         011344555555     


Q ss_pred             cccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         89 HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                         +.++++..+.......  .+++|||++++++.........++...+..++.|++.++.++|
T Consensus        76 -------------------l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH  134 (190)
T cd05145          76 -------------------LYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLY  134 (190)
T ss_pred             -------------------HHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHH
Confidence                               6677765444433322  3799999988755544334456888899999999999999999


Q ss_pred             h-CCccccCC
Q psy13106        169 E-ARYLSKPR  177 (177)
Q Consensus       169 ~-~giiH~Dl  177 (177)
                      + .||+||||
T Consensus       135 ~~~givHrDl  144 (190)
T cd05145         135 QEAGLVHGDL  144 (190)
T ss_pred             HhCCEecCCC
Confidence            9 99999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.75  E-value=3.9e-17  Score=115.80  Aligned_cols=118  Identities=20%  Similarity=0.340  Sum_probs=89.7

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.||+|+||.||.  +..+... +||++..... .....+.+|+.+++.+++..                   .+||||
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~-------------------~~h~nI   63 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRL-------------------IDWSGI   63 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccC-------------------CCCccc
Confidence            46899999999995  5555555 6898865432 23356889999999843211                   378999


Q ss_pred             eeeEEEEecCC---eEE-EEEec--cCCcchhHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCccccCC
Q psy13106        114 VQLIETFEDKH---KVY-LVMEL--VTGGELFDRIVEKGSYTEKDASMLIRQVLEAV-DYMHEARYLSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~---~~~-lv~e~--~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l-~~LH~~giiH~Dl  177 (177)
                      ++++++++++.   .++ ++|||  +.+++|.+++... .+++.  ..++.|++.++ +|||+++|+||||
T Consensus        64 vr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDl  131 (210)
T PRK10345         64 PRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMEL  131 (210)
T ss_pred             ceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCC
Confidence            99999999773   434 78999  5579999999664 46655  35688888888 9999999999997

>KOG1025|consensus

Probab=99.74  E-value=2e-18  Score=138.58  Aligned_cols=122  Identities=22%  Similarity=0.278  Sum_probs=103.0

Q ss_pred             eEEEeeecccceeEEEEEEEecC----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESREN----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ....++||+|+||+||+|.|--.    .-+||||++..........++..|.-++.+                       
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~mas-----------------------  754 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMAS-----------------------  754 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhc-----------------------
Confidence            44567899999999999998533    347899988655544455777888877777                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++++...... +.||++|++.|+|.++++.+ .++-.+....|..||++||.|||+++.+||||
T Consensus       755 -ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdL  824 (1177)
T KOG1025|consen  755 -LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDL  824 (1177)
T ss_pred             -CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhh
Confidence             99999999999886554 88999999999999999854 46889999999999999999999999999997

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.74  E-value=1.1e-16  Score=112.46  Aligned_cols=117  Identities=38%  Similarity=0.661  Sum_probs=102.8

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceee
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQL  116 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~  116 (177)
                      ||.|.+|.||++....+++.+++|.+...........+.+|+..++.                        +.|++++++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~------------------------l~~~~i~~~   56 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKK------------------------LNHPNIVKL   56 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHh------------------------cCCCCeeeE
Confidence            68999999999999888999999998654432223567888888888                        789999999


Q ss_pred             EEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        117 IETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       117 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++++......+++||++.+++|.+++... ..++...+..++.+++.++.+||+.|++|+||
T Consensus        57 ~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl  118 (215)
T cd00180          57 YGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDL  118 (215)
T ss_pred             eeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            99999889999999999989999998765 46899999999999999999999999999997

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0696|consensus

Probab=99.74  E-value=1.2e-18  Score=130.98  Aligned_cols=129  Identities=26%  Similarity=0.428  Sum_probs=108.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....|.++..||.|+||.|.+++.+.+.+.||||++++...-+..  +.-..|-+++.--                   
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~-------------------  406 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP-------------------  406 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecC-------------------
Confidence            3344788999999999999999999999999999999776542221  2223344444321                   


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          -..|.+++++.+|++-+.+|+||||++||+|--.++.-+++.++.+..++.+|+-||-|||++|||.|||
T Consensus       407 ----~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDL  476 (683)
T KOG0696|consen  407 ----GKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDL  476 (683)
T ss_pred             ----CCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeec
Confidence                2567899999999999999999999999999999999999999999999999999999999999999997

>KOG1164|consensus

Probab=99.72  E-value=1.5e-16  Score=120.16  Aligned_cols=126  Identities=22%  Similarity=0.363  Sum_probs=103.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCC-cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENG-TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +|.+.+.||.|+||.||.+.+.... ..+|+|+......... ..+..|..++......                    .
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~~l~~E~~vl~~l~~~--------------------~   77 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-SVLKIEIQVLKKLEKK--------------------N   77 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-ccchhHHHHHHHHhhh--------------------c
Confidence            8999999999999999999988764 6789998755432222 2677888888884320                    2


Q ss_pred             CCCCceeeEEEE-ecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETF-EDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ..++++.+++.+ ....+.|+||+.+ |.+|.++....  +.++..++..++.|++.+|+++|+.|+|||||
T Consensus        78 ~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDi  148 (322)
T KOG1164|consen   78 GPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDI  148 (322)
T ss_pred             CCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCc
Confidence            346889999999 4778899999988 88999987544  46999999999999999999999999999997

>KOG3653|consensus

Probab=99.72  E-value=2.1e-17  Score=125.60  Aligned_cols=121  Identities=23%  Similarity=0.322  Sum_probs=102.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .....+.+.+|+|+||.||+|...  ++.||||+++..    ..+.+.+|-+++....                      
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~----------------------  260 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ----EKQSFQNEKNIYSLPG----------------------  260 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH----HHHHHHhHHHHHhccC----------------------
Confidence            345777889999999999999876  689999998643    3456778888877643                      


Q ss_pred             CCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------Cccc
Q psy13106        108 LTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA---------RYLS  174 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---------giiH  174 (177)
                      +.|+||+++++.-....    .+|||++|.+.|+|.+++..+. ++.....+++..+++||+|||+.         .|+|
T Consensus       261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaH  339 (534)
T KOG3653|consen  261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAH  339 (534)
T ss_pred             ccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccc
Confidence            79999999998765443    6999999999999999998876 88999999999999999999975         5999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       340 RDl  342 (534)
T KOG3653|consen  340 RDL  342 (534)
T ss_pred             ccc
Confidence            997

>KOG0986|consensus

Probab=99.71  E-value=1.1e-17  Score=126.70  Aligned_cols=130  Identities=29%  Similarity=0.524  Sum_probs=113.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc--hhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .+.....|..-+.||+|+||.|+-|.-+.||+.||+|.+.++......  .-..+|-.++..                  
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k------------------  241 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK------------------  241 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH------------------
Confidence            445566789999999999999999999999999999998766544332  345678888888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++.+.|+.+-..|++.+.+|+||..|+||+|.-.|...+  .+++..++.|+.+|+.||++||..+||.|||
T Consensus       242 ------V~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDL  313 (591)
T KOG0986|consen  242 ------VSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDL  313 (591)
T ss_pred             ------hccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccC
Confidence                  778999999999999999999999999999988776554  5999999999999999999999999999997

>KOG1345|consensus

Probab=99.70  E-value=9.3e-18  Score=120.05  Aligned_cols=133  Identities=23%  Similarity=0.408  Sum_probs=107.1

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ..+.+.-.+.+.|.+.+.+|.|.||.|.+|+++.+.+.+++|.++....  ....+.+|...--.+              
T Consensus        14 ~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~L--------------   77 (378)
T KOG1345|consen   14 MEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFL--------------   77 (378)
T ss_pred             cccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceee--------------
Confidence            3445555677899999999999999999999999999999999864331  234555555322221              


Q ss_pred             CCcccccccCCCCCceeeEE-EEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIE-TFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               -.|.||+.-|+ .|+..+.++++|||++.|+|.+-+-..+ +-+.....++.|++.|+.|+|++++|||||
T Consensus        78 ---------s~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdl  147 (378)
T KOG1345|consen   78 ---------SPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDL  147 (378)
T ss_pred             ---------ccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhccc
Confidence                     25888887665 5677789999999999999999887665 788889999999999999999999999997

>KOG1167|consensus

Probab=99.70  E-value=2.7e-17  Score=123.25  Aligned_cols=128  Identities=22%  Similarity=0.318  Sum_probs=112.1

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEec---CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .+..+.+...|..+.+||.|+|+.||++.+..   .++.+|+|-+..-   .....+.+|++++..+             
T Consensus        28 ~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t---s~p~ri~~El~~L~~~-------------   91 (418)
T KOG1167|consen   28 RQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT---SSPSRILNELEMLYRL-------------   91 (418)
T ss_pred             HhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc---cCchHHHHHHHHHHHh-------------
Confidence            34456677789999999999999999999876   7889999988543   2456789999999885             


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                -++.||+++.+++..++.+.+||||+++....++...   ++..+++.+++.++.||+++|.+|||||||
T Consensus        92 ----------gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDi  158 (418)
T KOG1167|consen   92 ----------GGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDI  158 (418)
T ss_pred             ----------ccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCC
Confidence                      4789999999999999999999999999988888755   678999999999999999999999999997

>KOG0614|consensus

Probab=99.69  E-value=1.2e-18  Score=133.67  Aligned_cols=128  Identities=28%  Similarity=0.466  Sum_probs=112.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....+.++..||-|+||+|=++........+|+|++++...-..  ...+..|-+++.+                    
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~--------------------  476 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMME--------------------  476 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHh--------------------
Confidence            334457778889999999999988876666799999877654332  3557889999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ...++|+++|..|.++.++|+.||-|-||.+|..++.++.|++..++.++..+++|++|||++|||.|||
T Consensus       477 ----~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDL  546 (732)
T KOG0614|consen  477 ----CRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDL  546 (732)
T ss_pred             ----cCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccC
Confidence                7899999999999999999999999999999999999999999999999999999999999999999997

>KOG1165|consensus

Probab=99.69  E-value=3.8e-16  Score=114.66  Aligned_cols=126  Identities=21%  Similarity=0.318  Sum_probs=108.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      -...-+|.++++||.|+||.++.|...-++++||||.-+.+   ....++..|.+..+.+                    
T Consensus        24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL--------------------   80 (449)
T KOG1165|consen   24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLL--------------------   80 (449)
T ss_pred             eEecccceeccccccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHH--------------------
Confidence            34555899999999999999999999999999999985432   2445677788777764                    


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ...++|+..|-+..+..+-.+|||.+ |.+|.+++.-.+ .|+.+.+..++.|++.-++|+|++..|.|||
T Consensus        81 ---~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDI  150 (449)
T KOG1165|consen   81 ---GGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDI  150 (449)
T ss_pred             ---cCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeeccc
Confidence               36789999999999999999999999 889999887544 5999999999999999999999999999997

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.69  E-value=5.1e-16  Score=111.57  Aligned_cols=113  Identities=39%  Similarity=0.757  Sum_probs=99.5

Q ss_pred             ceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEEE
Q psy13106         41 AFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF  120 (177)
Q Consensus        41 ~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~  120 (177)
                      +||.||+|.+..+++.+++|++...........+..|+..++.                        ++|+|++++.+.+
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~------------------------l~~~~i~~~~~~~   56 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKK------------------------LKHPNIVRLYDVF   56 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHh------------------------CCCCcHHHHHhhe
Confidence            4899999999988999999998765433224667788888888                        7899999999999


Q ss_pred             ecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       121 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ......+++||++.+++|.+++.....++...+..++.+++.++.|||+.|++|+||
T Consensus        57 ~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i  113 (244)
T smart00220       57 EDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDL  113 (244)
T ss_pred             eeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence            988999999999998899999877666899999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>smart00090 RIO RIO-like kinase

Probab=99.66  E-value=5.9e-16  Score=111.99  Aligned_cols=122  Identities=21%  Similarity=0.177  Sum_probs=89.0

Q ss_pred             ceEEEeeecccceeEEEEEE-EecCCcEEEEEEEeccccccc-----------------------chhHHHHHHHHHhhc
Q psy13106         30 KYILKELLGTGAFSEVRLAE-SRENGTMFAVKIIDKKALKGK-----------------------EDSLENEIKVLRRFS   85 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~-~~~~~~~~avK~i~~~~~~~~-----------------------~~~~~~e~~~~~~~~   85 (177)
                      .|.+.+.||.|++|.||+|. +..+++.||+|+++.......                       ...+..|..++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999998 667899999999875431100                       012356777777732


Q ss_pred             ccccccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy13106         86 QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVD  165 (177)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~  165 (177)
                      .                      ....++.++..   . ..++|||++++.++.........+....+..++.||+.++.
T Consensus       109 ~----------------------~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~  162 (237)
T smart00090      109 E----------------------AGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMR  162 (237)
T ss_pred             h----------------------cCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHH
Confidence            1                      12334444432   2 34799999998887765544445667778899999999999


Q ss_pred             HHHhCC-ccccCC
Q psy13106        166 YMHEAR-YLSKPR  177 (177)
Q Consensus       166 ~LH~~g-iiH~Dl  177 (177)
                      +||++| |+||||
T Consensus       163 ~LH~~g~iiH~Di  175 (237)
T smart00090      163 KLYKEGELVHGDL  175 (237)
T ss_pred             HHHhcCCEEeCCC
Confidence            999999 999997

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.66  E-value=2.1e-15  Score=119.40  Aligned_cols=134  Identities=14%  Similarity=0.156  Sum_probs=89.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEe----------------cCCcEEEEEEEecccccc-------------cchhHH
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESR----------------ENGTMFAVKIIDKKALKG-------------KEDSLE   75 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~----------------~~~~~~avK~i~~~~~~~-------------~~~~~~   75 (177)
                      ....+.|.+.++||+|+||.||+|...                ..++.||||.+.......             ..+...
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            345678999999999999999999752                234679999875322110             011122


Q ss_pred             HHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEEEec--------CCeEEEEEeccCCcchhHHHHhcC-
Q psy13106         76 NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--------KHKVYLVMELVTGGELFDRIVEKG-  146 (177)
Q Consensus        76 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~-  146 (177)
                      .|+.++..+.+.                   -+.+.+++.+.+++..        ....|+||||+.+++|.+++.... 
T Consensus       221 vE~~~l~~l~~~-------------------~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~  281 (507)
T PLN03224        221 VEAYMCAKIKRN-------------------PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLG  281 (507)
T ss_pred             HHHHHHHHhhcc-------------------cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccC
Confidence            233333331110                   0123334555555532        356899999999999998875321 


Q ss_pred             -----------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        147 -----------------------SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       147 -----------------------~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                             .++...++.++.|++.+|.|||+.+|+||||
T Consensus       282 ~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDL  335 (507)
T PLN03224        282 PFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDI  335 (507)
T ss_pred             CCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence                                   1356678899999999999999999999997

>KOG0603|consensus

Probab=99.66  E-value=2e-16  Score=123.91  Aligned_cols=123  Identities=39%  Similarity=0.598  Sum_probs=104.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.+.|.+...+|.|+|+.|..|.+..+++..++|++.++..     ....|+.++..+                     
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~---------------------  372 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLV---------------------  372 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhh---------------------
Confidence            466789999999999999999999999999999999976521     122333333332                     


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        -+|+|++++.+.+.++...|+|||.+.|+-+.+.+.....+. .++..|+.+|+.++.|||++|||||||
T Consensus       373 --~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDL  441 (612)
T KOG0603|consen  373 --RDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDL  441 (612)
T ss_pred             --cCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence              479999999999999999999999999999999887776555 888889999999999999999999997

>KOG0669|consensus

Probab=99.65  E-value=1.4e-18  Score=123.22  Aligned_cols=130  Identities=25%  Similarity=0.377  Sum_probs=105.1

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEec-ccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +.-.....|.-..+||+|.||.||+|+.+.+++.||+|.+-- .+..+-.....+|+.++..                  
T Consensus        11 P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~------------------   72 (376)
T KOG0669|consen   11 PFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQL------------------   72 (376)
T ss_pred             CceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHH------------------
Confidence            334455678888999999999999999999999988876532 2223344667889999998                  


Q ss_pred             ccccccCCCCCceeeEEEEe--------cCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        102 DKDKERLTHPNIVQLIETFE--------DKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                            +.|+|++.+.+.+.        +...+|+||++|+. +|..++... .+++..++..++.+++.||.|+|...|
T Consensus        73 ------lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~ki  145 (376)
T KOG0669|consen   73 ------LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKI  145 (376)
T ss_pred             ------hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhH
Confidence                  88999887766543        23459999999976 888887654 469999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +|||+
T Consensus       146 lHRDm  150 (376)
T KOG0669|consen  146 LHRDM  150 (376)
T ss_pred             Hhhcc
Confidence            99995

>KOG0664|consensus

Probab=99.65  E-value=7.6e-18  Score=120.85  Aligned_cols=123  Identities=23%  Similarity=0.388  Sum_probs=101.4

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.+--+.||-|+||.||.+.+-++++.++.|.++.-..+ -....+.+|+.++..                        +
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcf------------------------F  109 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSS------------------------F  109 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHh------------------------h
Confidence            344567899999999999999999999999987532211 123567888888888                        6


Q ss_pred             CCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|.|++...+...-..     .+|+++|.+ ..+|..++.+-..++.+.+.-++.||+.||.|||+.||+||||
T Consensus       110 kHdNVLSaLDILQPph~dfFqEiYV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDI  182 (449)
T KOG0664|consen  110 RHDNVLSLLDILQPANPSFFQELYVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDI  182 (449)
T ss_pred             ccccHHHHHHhcCCCCchHHHHHHHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccC
Confidence            7999999888876432     267888888 5589998888888999999999999999999999999999997

>KOG0200|consensus

Probab=99.65  E-value=1.8e-15  Score=122.88  Aligned_cols=132  Identities=26%  Similarity=0.377  Sum_probs=110.3

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ......+...+.+.||.|.||.|++|....       ....||||.++..........+..|+.+++.+           
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~-----------  358 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKEL-----------  358 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHh-----------
Confidence            444444555677799999999999998542       14679999986555444456788999999885           


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHH
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQ  159 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~q  159 (177)
                                  ..|+|++.+.++......+++++||+..|+|..+++.++                .++..+...++.|
T Consensus       359 ------------g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~Q  426 (609)
T KOG0200|consen  359 ------------GKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQ  426 (609)
T ss_pred             ------------cCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHH
Confidence                        369999999999988899999999999999999998665                3888999999999


Q ss_pred             HHHHHHHHHhCCccccCC
Q psy13106        160 VLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       160 i~~~l~~LH~~giiH~Dl  177 (177)
                      |+.|++||.+..+|||||
T Consensus       427 Ia~GMe~L~~~~~vHRDL  444 (609)
T KOG0200|consen  427 IANGMEYLASVPCVHRDL  444 (609)
T ss_pred             HHHHHHHHhhCCccchhh
Confidence            999999999999999997

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.65  E-value=2.8e-15  Score=107.12  Aligned_cols=121  Identities=16%  Similarity=0.191  Sum_probs=92.7

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc--------hhHHHHHHHHHhhcccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--------DSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~--------~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      -.+.+.++|.+.+.+|.|+||.||++..  ++..+++|++.........        +.+.+|+..+.+           
T Consensus        25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~r-----------   91 (232)
T PRK10359         25 FDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDR-----------   91 (232)
T ss_pred             HHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHH-----------
Confidence            3456678999999999999999999765  3668999998654322211        114677777777           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecC--------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDK--------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  166 (177)
                                   +.|++|+.+.+.+...        +..+++|||++|.+|.+..    .+++    ....+++.++..
T Consensus        92 -------------L~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~  150 (232)
T PRK10359         92 -------------VRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIES  150 (232)
T ss_pred             -------------HHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHH
Confidence                         7899999999886633        3579999999999997763    1333    245699999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      +|+.|++|||+
T Consensus       151 lH~~gi~H~Di  161 (232)
T PRK10359        151 LHQHGMVSGDP  161 (232)
T ss_pred             HHHcCCccCCC
Confidence            99999999997

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.64  E-value=3e-15  Score=106.42  Aligned_cols=113  Identities=22%  Similarity=0.271  Sum_probs=88.2

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.||+|++|.||+|.+  .+..+++|..........       .....+|+.++..                        
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~------------------------   55 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSR------------------------   55 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHH------------------------
Confidence            5789999999999987  577899998653321111       1245567777776                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|++++.+..++.+....+++|||++|++|.+.+.....    ....++.+++.+|.++|+.|++|+|+
T Consensus        56 l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl  121 (211)
T PRK14879         56 ARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDL  121 (211)
T ss_pred             HHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            6778877776666667788999999999999998865432    77889999999999999999999996

>KOG0596|consensus

Probab=99.64  E-value=6.8e-16  Score=119.55  Aligned_cols=129  Identities=22%  Similarity=0.237  Sum_probs=103.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc-cccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+.+..|.+.++||+|+.+.||++..... +.||+|.+..... ......+..|+.+|.++.                 
T Consensus       356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-----------------  417 (677)
T KOG0596|consen  356 IKVKGREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLK-----------------  417 (677)
T ss_pred             EEECcchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-----------------
Confidence            334556799999999999999999987644 4555555433322 223367889999999964                 


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            +|.+|++++++-..+.++|+|||+= ..+|.+++..... .+...++.+..|++.++.++|++||||.||
T Consensus       418 ------g~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDL  486 (677)
T KOG0596|consen  418 ------GHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDL  486 (677)
T ss_pred             ------CCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCC
Confidence                  6899999999999999999999965 5699999987654 444688899999999999999999999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.63  E-value=2.5e-15  Score=121.01  Aligned_cols=124  Identities=19%  Similarity=0.225  Sum_probs=84.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecC----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESREN----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....+.|.+.+.||+|+||.||+|.+..+    +..+|+|.+....   . .    |..+...+..              
T Consensus       128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~---~-~----e~~~~e~l~~--------------  185 (566)
T PLN03225        128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG---A-V----EIWMNERVRR--------------  185 (566)
T ss_pred             CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc---h-h----HHHHHHHHHh--------------
Confidence            34556899999999999999999999988    8999999864321   1 1    1111111100              


Q ss_pred             cccccccCCCCCceeeEEE------EecCCeEEEEEeccCCcchhHHHHhcCC--------------------CCHHHHH
Q psy13106        101 NDKDKERLTHPNIVQLIET------FEDKHKVYLVMELVTGGELFDRIVEKGS--------------------YTEKDAS  154 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~------~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------~~~~~~~  154 (177)
                             ..+.++..+...      ......++++|||+.+++|.+++.....                    .....+.
T Consensus       186 -------~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~  258 (566)
T PLN03225        186 -------ACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQ  258 (566)
T ss_pred             -------hchhhHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHH
Confidence                   111111111111      1345679999999999999998864321                    1234466


Q ss_pred             HHHHHHHHHHHHHHhCCccccCC
Q psy13106        155 MLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       155 ~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .++.||+.||.|||++||+||||
T Consensus       259 ~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        259 TIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCcC
Confidence            89999999999999999999997

>KOG1006|consensus

Probab=99.61  E-value=1.1e-16  Score=114.35  Aligned_cols=132  Identities=20%  Similarity=0.262  Sum_probs=107.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ...+...+..+-+..||.|+||+|++..++.+++.+|||.|........+.++..|..+..+-                 
T Consensus        57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks-----------------  119 (361)
T KOG1006|consen   57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS-----------------  119 (361)
T ss_pred             cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh-----------------
Confidence            333444445555678999999999999999999999999998877666677888888766552                 


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-----EKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSK  175 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~  175 (177)
                            -+.|||+++|+.....+.+|+.||.+ ..+|..+-+     .+..+++..+..++...++||.||-+ ..||||
T Consensus       120 ------~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHR  192 (361)
T KOG1006|consen  120 ------SNCPNIVKFYGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHR  192 (361)
T ss_pred             ------cCCcHHHHHhhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhc
Confidence                  47999999999998899999999999 556655332     33459999999999999999999997 589999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      |+
T Consensus       193 Dv  194 (361)
T KOG1006|consen  193 DV  194 (361)
T ss_pred             cC
Confidence            96

>KOG0984|consensus

Probab=99.60  E-value=1.9e-15  Score=104.41  Aligned_cols=127  Identities=20%  Similarity=0.308  Sum_probs=106.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.......||+|+||.|-+.++..+|...|+|-+......+.+.+..+|+.+....                      
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----------------------  101 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----------------------  101 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----------------------
Confidence            3344555678999999999999999999999999998766555667777777766552                      


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI----VEKGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l----~~~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                       .+.|+++.+|+.+.+...+|+.||.+ ..+|..+-    ...+.+++..+..++..++.||.|||++ .+||||+
T Consensus       102 -~~CPf~V~FyGa~~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDv  175 (282)
T KOG0984|consen  102 -VDCPFTVHFYGALFREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDV  175 (282)
T ss_pred             -CCCCeEEEeehhhhccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccC
Confidence             68999999999998999999999999 56776654    3456799999999999999999999985 8999996

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.60  E-value=1.2e-14  Score=102.58  Aligned_cols=109  Identities=23%  Similarity=0.254  Sum_probs=80.3

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEeccccccc-------chhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .||+|++|.||++.+  .+..+++|..........       ...+.+|..++..                        +
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~------------------------l   54 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSR------------------------A   54 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHH------------------------H
Confidence            379999999999985  467899998654321111       1345578887777                        5


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .++++..+.-.+......+++||+++|++|.+.+.....       .++.+++.+|.+||+.|++|+|+
T Consensus        55 ~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl  116 (199)
T TIGR03724        55 RKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDL  116 (199)
T ss_pred             HHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCC
Confidence            565544444444456667899999999999987754321       78899999999999999999996

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0983|consensus

Probab=99.57  E-value=3e-15  Score=107.49  Aligned_cols=124  Identities=21%  Similarity=0.274  Sum_probs=103.3

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      ....+..||.|+-|.||++..++++..+|||............++...+.++..-                       .+
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s-----------------------~d  149 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS-----------------------HD  149 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc-----------------------cC
Confidence            3455667999999999999999999999999987665555557777777766541                       46


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      .|+|++-+++|..+..+++.||.+ ...+..+++ ..+++++..+..+...++.||.||.+ +||||||+
T Consensus       150 cpyIV~c~GyFi~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDv  218 (391)
T KOG0983|consen  150 CPYIVQCFGYFITNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV  218 (391)
T ss_pred             CCeeeeeeeEEeeCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeeccc
Confidence            899999999999999999999988 556666654 34579999999999999999999997 69999996

>KOG0670|consensus

Probab=99.55  E-value=9.7e-15  Score=112.77  Aligned_cols=137  Identities=20%  Similarity=0.306  Sum_probs=113.6

Q ss_pred             CcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         20 NEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        20 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....+..+..+|.+....|+|-|++|..|.+...+..||||+|.....  ....-..|+++|+++.-.-       .   
T Consensus       423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~--M~KtGl~EleiLkKL~~AD-------~---  490 (752)
T KOG0670|consen  423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV--MHKTGLKELEILKKLNDAD-------P---  490 (752)
T ss_pred             EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH--HhhhhhHHHHHHHHhhccC-------c---
Confidence            345677888899999999999999999999998899999999965543  3455678999999843210       0   


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                              =+--+++.++..|...+++|||+|-+ ..+|.+.++.-+.   +....++.|+.|+.-||..|-..||+|.|
T Consensus       491 --------Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaD  561 (752)
T KOG0670|consen  491 --------EDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHAD  561 (752)
T ss_pred             --------hhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecc
Confidence                    02236789999999999999999988 7799999986553   88999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       562 I  562 (752)
T KOG0670|consen  562 I  562 (752)
T ss_pred             c
Confidence            7

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.55  E-value=8.1e-14  Score=111.94  Aligned_cols=114  Identities=21%  Similarity=0.253  Sum_probs=85.8

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-------cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-------KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .|...+.||+|+||.||++.+...  .+++|.........       ....+.+|..++..                   
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-------------------  392 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSE-------------------  392 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHh-------------------
Confidence            345678999999999999987544  33444322211110       11345678888877                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +.|++++.+..+.......+++|||+++++|.+++.        ....++.+++.+|.+||+.|++||||
T Consensus       393 -----l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDl  454 (535)
T PRK09605        393 -----ARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDL  454 (535)
T ss_pred             -----hcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCC
Confidence                 789998887776666677889999999999998875        34678999999999999999999997

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.51  E-value=1e-12  Score=97.73  Aligned_cols=120  Identities=37%  Similarity=0.634  Sum_probs=103.7

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      |.+.+.||.|+|+.||.+.+.   ..+++|.+........  ...+.+|..++..                        +
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~------------------------~   54 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILAS------------------------L   54 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHH------------------------c
Confidence            788999999999999999987   7889999876654442  4567778877777                        7


Q ss_pred             CCC-CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THP-NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|+ +++.+.+.+......+++++++.++++.+++....   .++......++.|++.++.|+|+.|++||||
T Consensus        55 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~  127 (384)
T COG0515          55 NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDI  127 (384)
T ss_pred             cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            777 79999999987777899999999999997777664   6999999999999999999999999999997

>KOG0665|consensus

Probab=99.50  E-value=2.4e-14  Score=104.47  Aligned_cols=124  Identities=24%  Similarity=0.405  Sum_probs=102.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +...+|.-+..+|.|+- .|..+.+.-+++++++|........ ....+..+|..++..                     
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~---------------------   71 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKC---------------------   71 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhh---------------------
Confidence            34558999999999998 8888999999999999987544222 223567788888887                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++|+|+++++.+|.-.      ..+|+|||++ ..+|.+.+...  ++-..+..++.|+++|++|||+.||+||||
T Consensus        72 ---v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~~e--lDH~tis~i~yq~~~~ik~lhs~~IihRdL  144 (369)
T KOG0665|consen   72 ---VNHKNIISLLNVFTPQKTLEEFQEVYLVMELM-DANLCQVILME--LDHETISYILYQMLCGIKHLHSAGIIHRDL  144 (369)
T ss_pred             ---hcccceeeeeeccCccccHHHHHhHHHHHHhh-hhHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHhcceeeccc
Confidence               8999999999998533      3589999999 55898887733  788899999999999999999999999997

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.49  E-value=4.4e-13  Score=94.30  Aligned_cols=110  Identities=15%  Similarity=0.140  Sum_probs=81.0

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc---chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK---EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ..+...|++|.||+|+.+..  .+.+++.+.+........   ...+.+|+.++..                        
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~------------------------   57 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQ------------------------   57 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHh------------------------
Confidence            34577899999999997665  577777666543332111   1246789999998                        


Q ss_pred             C-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 L-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      + ++++++.++++    +..+++|+|+.|.+|.+....      . ...++.|++.+|.++|++||+||||
T Consensus        58 L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL  117 (218)
T PRK12274         58 LDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDL  117 (218)
T ss_pred             cCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCC
Confidence            5 45789998876    346899999999888654321      1 2357789999999999999999997

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.47  E-value=2.9e-13  Score=95.48  Aligned_cols=113  Identities=21%  Similarity=0.232  Sum_probs=80.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc---------------------chhHHHHHHHHHhhcccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK---------------------EDSLENEIKVLRRFSQSV   88 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~---------------------~~~~~~e~~~~~~~~~~~   88 (177)
                      .|.+.+.||.|+||.||++... +++.++||+++.......                     ......|..++..     
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----   89 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA-----   89 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH-----
Confidence            3788899999999999999875 789999999764321000                     0113445555555     


Q ss_pred             cccccccccCCCcccccccCCCC--CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy13106         89 HNRLDETNDNNSNDKDKERLTHP--NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  166 (177)
                                         +.++  .++..++    ....+++|||+++++|.....      ......++.+++.++.+
T Consensus        90 -------------------l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~  140 (198)
T cd05144          90 -------------------LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVK  140 (198)
T ss_pred             -------------------HHHcCCCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHH
Confidence                               4344  3444443    234589999999988866432      13456788999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      +|+.||+|+||
T Consensus       141 lh~~gi~H~Dl  151 (198)
T cd05144         141 AYKHGIIHGDL  151 (198)
T ss_pred             HHHCCCCcCCC
Confidence            99999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1027|consensus

Probab=99.47  E-value=9.5e-14  Score=112.02  Aligned_cols=115  Identities=24%  Similarity=0.328  Sum_probs=91.9

Q ss_pred             EEeeecccceeE-EEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         33 LKELLGTGAFSE-VRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        33 ~~~~lg~g~~g~-v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      -.+.+|.|+.|+ ||+|...  ++.||||-+-.    ....-+.+|+..++.-                       -.||
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~----e~~~~A~rEi~lL~eS-----------------------D~H~  563 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYE--GREVAVKRLLE----EFFDFAQREIQLLQES-----------------------DEHP  563 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeC--CceehHHHHhh----HhHHHHHHHHHHHHhc-----------------------cCCC
Confidence            345688999986 7899887  77999997632    2335667888888762                       4799


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC---CC-HHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS---YT-EKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~-~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++.-.++.+.|+..|.|. .+|.+++.....   .. .-..+.++.|++.||++||+.+||||||
T Consensus       564 NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDL  632 (903)
T KOG1027|consen  564 NVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDL  632 (903)
T ss_pred             ceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccC
Confidence            99999999889999999999995 599999976311   11 1445788999999999999999999997

>KOG1166|consensus

Probab=99.46  E-value=1.9e-13  Score=113.69  Aligned_cols=127  Identities=20%  Similarity=0.235  Sum_probs=96.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..-++.|-+.+.||.|+||+||+|.... ++.+|+|+-.....+.-.    .=..++.++..                  
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfY----I~~q~~~RLk~------------------  750 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFY----ICLQVMERLKP------------------  750 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeee----ehHHHHHhhch------------------
Confidence            3445679999999999999999999987 999999986543322211    11111222110                  


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .--+.|..+.......+.-+++++|.+.|+|.+++...+.+++..+..+..|++..++.||..+|||+||
T Consensus       751 ---~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDi  820 (974)
T KOG1166|consen  751 ---QMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDI  820 (974)
T ss_pred             ---hhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccC
Confidence               1123455555555666778899999999999999998888999999999999999999999999999998

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.40  E-value=2.2e-12  Score=89.98  Aligned_cols=115  Identities=24%  Similarity=0.276  Sum_probs=73.0

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchh-H----------------------HHHHHHHHhhcccccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-L----------------------ENEIKVLRRFSQSVHN   90 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~-~----------------------~~e~~~~~~~~~~~~~   90 (177)
                      .+.||+|+||.||+|.+. +++.|+||++........... .                      ..|...+..+.     
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----   75 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY-----   75 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH-----
Confidence            467999999999999887 789999999865432111100 0                      12222222211     


Q ss_pred             cccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106         91 RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR-IVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                                       -.+..++.++..    ...+++|||++++++... +.... . ...+..++.+++.++.++|.
T Consensus        76 -----------------~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~  132 (187)
T cd05119          76 -----------------EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYR  132 (187)
T ss_pred             -----------------HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhh
Confidence                             011224444443    235899999988544321 21111 1 16778899999999999999


Q ss_pred             -CCccccCC
Q psy13106        170 -ARYLSKPR  177 (177)
Q Consensus       170 -~giiH~Dl  177 (177)
                       .||+|+||
T Consensus       133 ~~~ivH~Dl  141 (187)
T cd05119         133 EAGLVHGDL  141 (187)
T ss_pred             ccCcCcCCC
Confidence             99999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.32  E-value=1.7e-11  Score=82.03  Aligned_cols=111  Identities=19%  Similarity=0.256  Sum_probs=86.2

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +++.|+.|.++.||++....  ..+++|.......   ...+..|..++..+.+                     . ..+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~---------------------~-~~~   54 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK---GADREREVAILQLLAR---------------------K-GLP   54 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc---hhHHHHHHHHHHHHHH---------------------c-CCC
Confidence            35789999999999999754  6889998754321   3467788888888432                     1 257


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA---RYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---giiH~Dl  177 (177)
                      +++++.+....+..+++||++.+..+..+       +......++.+++.+++++|..   +++|+||
T Consensus        55 ~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl  115 (155)
T cd05120          55 VPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDL  115 (155)
T ss_pred             CCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCC
Confidence            88888888777889999999988766554       5566677889999999999985   7999996

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1024|consensus

Probab=99.30  E-value=2.7e-12  Score=96.49  Aligned_cols=125  Identities=19%  Similarity=0.204  Sum_probs=90.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCC-----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENG-----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .+++....+..|+||+||.|.|+..+     +.+.+|.+......-+...+..|...+..                    
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~--------------------  343 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYG--------------------  343 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhc--------------------
Confidence            45777778999999999999877443     23444443222211112334455555555                    


Q ss_pred             ccccCCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        104 DKERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEK--------GSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                          ..|||+.++.+... +....++.+++..-|+|..++.-.        ..++..+...++.|++.|++|||.+||||
T Consensus       344 ----~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViH  419 (563)
T KOG1024|consen  344 ----ASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIH  419 (563)
T ss_pred             ----CcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCccc
Confidence                67999999988765 446677888888889999998721        13667788899999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      +||
T Consensus       420 kDi  422 (563)
T KOG1024|consen  420 KDI  422 (563)
T ss_pred             chh
Confidence            997

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.26  E-value=1.3e-10  Score=84.24  Aligned_cols=111  Identities=14%  Similarity=0.218  Sum_probs=75.8

Q ss_pred             eec-ccceeEEEEEEEecCCcEEEEEEEecccc-----c-------ccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         36 LLG-TGAFSEVRLAESRENGTMFAVKIIDKKAL-----K-------GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        36 ~lg-~g~~g~v~~~~~~~~~~~~avK~i~~~~~-----~-------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .|| .|+.|++|.+...  +..+++|.+.....     .       .......+|..++..                   
T Consensus        38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~-------------------   96 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQ-------------------   96 (239)
T ss_pred             eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHH-------------------
Confidence            465 6777788877654  67889988753211     0       112446678888887                   


Q ss_pred             cccccCCCCCc--eeeEEEEecC-Ce---EEEEEeccCC-cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        103 KDKERLTHPNI--VQLIETFEDK-HK---VYLVMELVTG-GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       103 ~~~~~~~h~~i--~~~~~~~~~~-~~---~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                           +.++++  +.+++..... ..   .+++||+++| .+|.+++.. ..+++..    +.||+.+|.+||++||+||
T Consensus        97 -----L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~Hr  166 (239)
T PRK01723         97 -----LYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHA  166 (239)
T ss_pred             -----HHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCC
Confidence                 566654  6666654322 22   3599999987 688888754 3455543    5689999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       167 Dl  168 (239)
T PRK01723        167 DL  168 (239)
T ss_pred             CC
Confidence            97

>KOG0590|consensus

Probab=98.98  E-value=1.2e-10  Score=94.45  Aligned_cols=129  Identities=25%  Similarity=0.395  Sum_probs=89.8

Q ss_pred             cce-EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y-~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.| .....+|.|++|.++.+........++.|.+.............. ..                  ...|......
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~-~~------------------i~sE~~i~~~  377 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYN-YN------------------ITSEFCIGSS  377 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHh-hh------------------hhhheeeccc
Confidence            445 467789999999888777766555555554431100111111000 00                  1234455556


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.|+|++.......+.......||||++ +|+.++.+.+.+...++..++.|++.|++|+|+.||.||||
T Consensus       378 l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  378 LSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             ccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            8999987666655555555555999998 99999988877999999999999999999999999999997

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.98  E-value=1.5e-08  Score=71.11  Aligned_cols=117  Identities=18%  Similarity=0.189  Sum_probs=75.6

Q ss_pred             eeecccceeEEEEEEEec------CCcEEEEEEEecccc--ccc-------------------c----hhHHHHHHHHHh
Q psy13106         35 ELLGTGAFSEVRLAESRE------NGTMFAVKIIDKKAL--KGK-------------------E----DSLENEIKVLRR   83 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~------~~~~~avK~i~~~~~--~~~-------------------~----~~~~~e~~~~~~   83 (177)
                      ..||.|--+.||.|....      .+..+|||+......  +..                   .    ....+|.+.+.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468899999999997653      357899999853311  000                   0    011245555544


Q ss_pred             hcccccccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13106         84 FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEA  163 (177)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~  163 (177)
                      +..                      ..-+++.++..    ..-+++|||+.+..+..-......++......+..+++.+
T Consensus        83 l~~----------------------~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~  136 (197)
T cd05146          83 MQK----------------------AGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSM  136 (197)
T ss_pred             HHH----------------------cCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHH
Confidence            221                      23467777764    3457899999664443222223345666777888999999


Q ss_pred             HHHH-HhCCccccCC
Q psy13106        164 VDYM-HEARYLSKPR  177 (177)
Q Consensus       164 l~~L-H~~giiH~Dl  177 (177)
                      |..+ |+.|+||+||
T Consensus       137 l~~l~H~~glVHGDL  151 (197)
T cd05146         137 MKQLYKECNLVHADL  151 (197)
T ss_pred             HHHHHHhCCeecCCC
Confidence            9998 8999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.98  E-value=1e-09  Score=87.60  Aligned_cols=138  Identities=16%  Similarity=0.337  Sum_probs=79.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhh-----------------------
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF-----------------------   84 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~-----------------------   84 (177)
                      ...|.. +.||+|++|.||.|..+.+|+.||||++.+...    ..+..++.++..+                       
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~----~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~  193 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDIL----PVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF  193 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH----HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence            345665 789999999999999988899999999865421    2222222222221                       


Q ss_pred             cccccccccccccCCCcccccccCCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHH--HHhcC----CCCHHHHHHHH
Q psy13106         85 SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDR--IVEKG----SYTEKDASMLI  157 (177)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~--l~~~~----~~~~~~~~~~~  157 (177)
                      ......+......+.+..++.....+.+.+.+...+. .....++||||++|+++.+.  +...+    .+.+..+..++
T Consensus       194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~  273 (537)
T PRK04750        194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF  273 (537)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence            1111111222222222222222333443344433332 24567899999999999774  33333    24455555666


Q ss_pred             HHHHHHHHHHHhCCccccCC
Q psy13106        158 RQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       158 ~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .|+.       ..|++|+|+
T Consensus       274 ~Qif-------~~GffHaDp  286 (537)
T PRK04750        274 TQVF-------RDGFFHADM  286 (537)
T ss_pred             HHHH-------hCCeeeCCC
Confidence            6654       589999996

>KOG4158|consensus

Probab=98.97  E-value=7.5e-10  Score=83.90  Aligned_cols=69  Identities=26%  Similarity=0.399  Sum_probs=59.2

Q ss_pred             cCCCCCceeeEEEEec---------------------------CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHH
Q psy13106        107 RLTHPNIVQLIETFED---------------------------KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQ  159 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q  159 (177)
                      .-.||||+++...|.+                           +..+|+||..++. +|.+++..+. .+......++.|
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQ  349 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQ  349 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHH
Confidence            4689999999988732                           3569999999955 9999997765 677888889999


Q ss_pred             HHHHHHHHHhCCccccCC
Q psy13106        160 VLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       160 i~~~l~~LH~~giiH~Dl  177 (177)
                      +++|+.|||.+||.||||
T Consensus       350 lLEav~hL~~hgvAhRDl  367 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRDL  367 (598)
T ss_pred             HHHHHHHHHHccchhhcc
Confidence            999999999999999997

>KOG1240|consensus

Probab=98.97  E-value=1.4e-10  Score=96.87  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=98.9

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|...+.||++.|=++.+|.+..  ..++||++-++...-.-..+.++++-.+...                      ++
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e--G~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l----------------------~~   79 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE--GLVVVKVFVKQDPTISLRPFKQRLEEIKFAL----------------------MK   79 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC--ceEEEEEEeccCCCCCchHHHHHHHHHHHHh----------------------hc
Confidence            68889999999999999998763  3599999976654434445555544444211                      68


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||.+.+..+...++..|+|-+|..+ +|+|.+..++-+..-+.+-|+.|++.||.-+|..||+|+||
T Consensus        80 ~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDI  146 (1431)
T KOG1240|consen   80 APNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDI  146 (1431)
T ss_pred             CCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            99999998888888888999999854 99999988776777888888999999999999999999997

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.94  E-value=1.4e-09  Score=85.40  Aligned_cols=136  Identities=18%  Similarity=0.246  Sum_probs=77.4

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccc-----------------------cc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV-----------------------HN   90 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~-----------------------~~   90 (177)
                      .+.||+|++|.||+|... +|+.||||+.....    ...+..++.++..+....                       ..
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i----~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  196 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGI----EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR  196 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCc----HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence            357999999999999875 68999999975432    233444444443332111                       11


Q ss_pred             cccccccCCCcccccccCCCCCceeeEEEE-ecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHH-HHHHH
Q psy13106         91 RLDETNDNNSNDKDKERLTHPNIVQLIETF-EDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLE-AVDYM  167 (177)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~-~l~~L  167 (177)
                      +......+.+..++...+.+.+-+.+...+ ......+++|||++|++|.+...... ..+   ...++.+++. .+..+
T Consensus       197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV  273 (437)
T ss_pred             HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence            111111222222222233333323332222 22345789999999999988764321 122   2335555555 46788


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |..|++|+|+
T Consensus       274 ~~~g~~H~D~  283 (437)
T TIGR01982       274 LRDGFFHADL  283 (437)
T ss_pred             HhCCceeCCC
Confidence            9999999996

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.89  E-value=8.5e-10  Score=92.73  Aligned_cols=69  Identities=17%  Similarity=0.203  Sum_probs=56.4

Q ss_pred             CCC-CCceeeEEEE-------ecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTH-PNIVQLIETF-------EDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h-~~i~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.| +||..+++++       .....++.+||++ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            556 5777777776       2334577888887 6699999965 345999999999999999999999999999997

>KOG3087|consensus

Probab=98.88  E-value=2.8e-08  Score=68.33  Aligned_cols=119  Identities=18%  Similarity=0.176  Sum_probs=82.4

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------chhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ....+-+|+-++|+.+.+.  ++.+.||.-..+..+..       ..+..+|.+.+.+                      
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k----------------------   66 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAK----------------------   66 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHH----------------------
Confidence            4667889999999999886  77778887543322211       1334456666665                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCC-cchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTG-GELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.--.|.-+.-++.+...-.++|||++| .++.+++.+.-.  ........++..|-..+.-||.++|||+||
T Consensus        67 --~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDL  139 (229)
T KOG3087|consen   67 --CRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDL  139 (229)
T ss_pred             --HHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccc
Confidence              3333555555566677777899999976 477787765421  223333688899999999999999999997

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=4.4e-08  Score=67.38  Aligned_cols=110  Identities=24%  Similarity=0.235  Sum_probs=75.4

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccc-------hhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-------DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~-------~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ..+.+|+-+.|+.+.+.  +..+.+|.-.++......       ..-.+|.+++..                        
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~------------------------   55 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAK------------------------   55 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHH------------------------
Confidence            35778999999999774  445777765433222111       233456676666                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.--.++.+.=+..+++...++|||++|..|.+.+.+.   .    ..++..+-.-+.-||..||+|+||
T Consensus        56 a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDL  118 (204)
T COG3642          56 AREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDL  118 (204)
T ss_pred             HHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCC
Confidence            33445555555555778888999999998888888765   1    345566666778899999999997

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.81  E-value=3.9e-08  Score=67.33  Aligned_cols=107  Identities=14%  Similarity=0.101  Sum_probs=72.6

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.++.|.++.+|++...  +..+++|.......  .......|..++..+..                       ...+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~-----------------------~~~~   55 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE--LLINRENEAENSKLAAE-----------------------AGIG   55 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHH-----------------------hCCC
Confidence            457889999999998864  77899998643321  12345678877777432                       1123


Q ss_pred             eeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----cccCC
Q psy13106        114 VQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY-----LSKPR  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi-----iH~Dl  177 (177)
                      ++++....  ...+++||+++|.++.+.     ..   ....++.+++.+|+.||..++     +|+|+
T Consensus        56 P~~~~~~~--~~~~lv~e~i~G~~l~~~-----~~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~  114 (170)
T cd05151          56 PKLYYFDP--ETGVLITEFIEGSELLTE-----DF---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDL  114 (170)
T ss_pred             CceEEEeC--CCCeEEEEecCCCccccc-----cc---cCHHHHHHHHHHHHHHhCCCCCCceeecCCC
Confidence            45555433  234799999999877543     01   123456789999999999985     99996

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0195|consensus

Probab=98.77  E-value=2.4e-09  Score=77.59  Aligned_cols=115  Identities=17%  Similarity=0.323  Sum_probs=88.3

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      ..+..+|.....|..|+|+|..++  +++|++.-+..... ...+..|...++-                        +.
T Consensus       192 lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lri------------------------fs  245 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRI------------------------FS  245 (448)
T ss_pred             hhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceee------------------------ec
Confidence            344556778888999999998654  45566544333222 2334445555554                        67


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      ||||+.+.+....+..+.++..|++.|+|+..+.+...  .+..++.+++.+++.|++|||+..
T Consensus       246 hpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  246 HPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             CCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc
Confidence            99999999999999999999999999999999987654  678889999999999999999863

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.75  E-value=1.8e-07  Score=69.25  Aligned_cols=133  Identities=22%  Similarity=0.266  Sum_probs=74.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+...+.||.|.++.||.+.+..+++.+++|++........  ...+.+|.-....+....              .....
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~--------------~p~~a   78 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVK--------------NPKEA   78 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT----------------SHHHH
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCC--------------CHHHH
Confidence            56778899999999999999999999999999865542111  123333332222211000              00000


Q ss_pred             CCCCCceeeEEEE---------e---cCC-----eEEEEEeccCCcchhHHHH---hcCCC---CHHHH-HHHHHHHHHH
Q psy13106        108 LTHPNIVQLIETF---------E---DKH-----KVYLVMELVTGGELFDRIV---EKGSY---TEKDA-SMLIRQVLEA  163 (177)
Q Consensus       108 ~~h~~i~~~~~~~---------~---~~~-----~~~lv~e~~~~~~L~~~l~---~~~~~---~~~~~-~~~~~qi~~~  163 (177)
                      ..|-.++-..+..         .   +..     ..+++|+-+ .++|.+++.   .....   ....+ ..++.|+++.
T Consensus        79 ~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~l  157 (288)
T PF14531_consen   79 YRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRL  157 (288)
T ss_dssp             HHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHH
Confidence            0111122222211         1   111     246778877 558877654   22222   12333 3556999999


Q ss_pred             HHHHHhCCccccCC
Q psy13106        164 VDYMHEARYLSKPR  177 (177)
Q Consensus       164 l~~LH~~giiH~Dl  177 (177)
                      +++||+.|++|+||
T Consensus       158 vA~Lh~~GlVHgdi  171 (288)
T PF14531_consen  158 VANLHSYGLVHGDI  171 (288)
T ss_dssp             HHHHHHTTEEEST-
T ss_pred             HHHHhhcceEeccc
Confidence            99999999999997

>KOG1243|consensus

Probab=98.71  E-value=6.7e-08  Score=77.52  Aligned_cols=101  Identities=22%  Similarity=0.366  Sum_probs=77.0

Q ss_pred             EEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEEEecCCeE
Q psy13106         47 LAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV  126 (177)
Q Consensus        47 ~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~  126 (177)
                      .|..+.++.++.|.....+.. .....+.+.+.-++.                        +.||||+++++.++....+
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKt------------------------lRHP~Il~yL~t~e~~~~~   84 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKT------------------------LRHPNILSYLDTTEEEGTL   84 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhh------------------------ccCchhhhhhhhhcccCce
Confidence            456667788999988754432 112334555555665                        8999999999999999999


Q ss_pred             EEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCC
Q psy13106        127 YLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH-EARYLSKPR  177 (177)
Q Consensus       127 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH-~~giiH~Dl  177 (177)
                      |+|+|.+.  .|..++...+   ...+..-+.||+.||.||| +.+++|++|
T Consensus        85 ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv  131 (690)
T KOG1243|consen   85 YLVTERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNV  131 (690)
T ss_pred             EEEeeccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccE
Confidence            99999885  5666776644   5666677899999999997 578999875

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.66  E-value=3e-07  Score=65.53  Aligned_cols=113  Identities=21%  Similarity=0.295  Sum_probs=82.1

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      +.|+.|.++.+|++.... ++.+++|.............+..|..++..+..                      .+.+++
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~----------------------~~~~vp   60 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAG----------------------TGVPVP   60 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhC----------------------CCCCCC
Confidence            578899999999998643 578999986543321234567888888887431                      123466


Q ss_pred             eeEEEEecC---CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        115 QLIETFEDK---HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       115 ~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      +++.+....   +..+++||+++|.++.+.+.. ..++......++.+++.+|..||+..
T Consensus        61 ~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~  119 (223)
T cd05154          61 KVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVD  119 (223)
T ss_pred             CEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            777666543   256899999999888776532 34778888899999999999999864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603|consensus

Probab=98.51  E-value=2.6e-08  Score=79.05  Aligned_cols=118  Identities=25%  Similarity=0.508  Sum_probs=92.7

Q ss_pred             ecccceeEEEEEEE---ecCCcEEEEEEEecccccccch-hHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         37 LGTGAFSEVRLAES---RENGTMFAVKIIDKKALKGKED-SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        37 lg~g~~g~v~~~~~---~~~~~~~avK~i~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      +|.|+||.|++++.   ...+.-+++|+..+........ .-..|..++...                       -+||.
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~-----------------------~~~~f   58 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFV-----------------------HNTPF   58 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhc-----------------------cCCCc
Confidence            68999999997764   3446778888876543322221 122333344431                       25999


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.+...++.+..+++++++..+|.++..+.....+.+.....+...++-+++++|+.||++||+
T Consensus        59 ~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~  123 (612)
T KOG0603|consen   59 LVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDY  123 (612)
T ss_pred             eeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcc
Confidence            99999999999999999999999999999887777889999999999999999999999999996

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.50  E-value=4.3e-06  Score=61.70  Aligned_cols=53  Identities=21%  Similarity=0.221  Sum_probs=44.3

Q ss_pred             eEEEEEeccCCc-chhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        125 KVYLVMELVTGG-ELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       125 ~~~lv~e~~~~~-~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .-+++||++++. +|.+++..  ....+......++.+++..+.-||++||+|+||
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL  164 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDC  164 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCC
Confidence            478999999875 78888753  234566778899999999999999999999997

>KOG3741|consensus

Probab=98.38  E-value=4.8e-06  Score=65.65  Aligned_cols=109  Identities=17%  Similarity=0.187  Sum_probs=80.4

Q ss_pred             ceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCceeeEEEE
Q psy13106         41 AFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF  120 (177)
Q Consensus        41 ~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~  120 (177)
                      .-.+.|++....+|-.|+.|.++.... ......-.-++.+++                        +.|+|++++.+.|
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~-~~~nk~t~lve~wkk------------------------l~h~NvV~frevf  342 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRD-QSTNKDTSLVEAWKK------------------------LCHTNVVPFREVF  342 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccc-cCcccchHHHHHHHH------------------------hccCceeehhhhh
Confidence            345789999999999999998833221 111222333556777                        8999999999988


Q ss_pred             e----cCCeEEEEEeccCC-cchhHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        121 E----DKHKVYLVMELVTG-GELFDRIVE---------------KGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       121 ~----~~~~~~lv~e~~~~-~~L~~~l~~---------------~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                      .    ....+++|++|+++ ++|.++.-.               +...++..+|.++.|++.||.++|+.|..-
T Consensus       343 ~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAc  416 (655)
T KOG3741|consen  343 LTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLAC  416 (655)
T ss_pred             hhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            6    34579999999986 567664321               234778999999999999999999998643

>KOG0601|consensus

Probab=98.27  E-value=5.5e-07  Score=71.24  Aligned_cols=128  Identities=20%  Similarity=0.194  Sum_probs=95.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEe-cCCcEEEEEEEecccccccchh-HHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESR-ENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~~~avK~i~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...+|..+..||.|.|+.++.+... .++..|++|...........+. -..|+-+....                    
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l--------------------  322 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAIL--------------------  322 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHh--------------------
Confidence            3446888999999999999988866 6788999998644322211111 11222222221                    


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ..|.+++.++..|......|+..|||+++++...+.-...+++...+.++.|++.++.++|+..++|+|+
T Consensus       323 ---~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~  392 (524)
T KOG0601|consen  323 ---GSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDV  392 (524)
T ss_pred             ---hcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccc
Confidence               3578888888888888888899999999888776644445889999999999999999999999999985

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.24  E-value=4.8e-05  Score=54.05  Aligned_cols=66  Identities=17%  Similarity=0.225  Sum_probs=52.1

Q ss_pred             CceeeEEEEecC----CeEEEEEeccCC-cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDK----HKVYLVMELVTG-GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~----~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ..+.+..+.+..    ...++++|.+++ .+|.+++......+......++.++...++-||++||+|+|+
T Consensus        74 ~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl  144 (206)
T PF06293_consen   74 PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDL  144 (206)
T ss_pred             CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            355666665542    235889999987 478888876555777788899999999999999999999997

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0590|consensus

Probab=98.22  E-value=1.4e-07  Score=76.77  Aligned_cols=126  Identities=24%  Similarity=0.400  Sum_probs=95.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEec-CCcEEEEEEEeccc-ccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKA-LKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...|.+.+.||.|+|+.+-...... ....+++|.+.... .......+..|..+-+.                      
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~----------------------   76 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKK----------------------   76 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccc----------------------
Confidence            4578888899999999998777643 34456666553321 01111222233333333                      


Q ss_pred             ccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCccccCC
Q psy13106        106 ERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKG-SYTEKDASMLIRQVLEAVDYMH-EARYLSKPR  177 (177)
Q Consensus       106 ~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l-~~~~-~~~~~~~~~~~~qi~~~l~~LH-~~giiH~Dl  177 (177)
                        +. |.|++..++....+.+.++.+++..+++++..+ .... ..+...+..++.|+..++.|+| ..++.|+||
T Consensus        77 --~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~i  150 (601)
T KOG0590|consen   77 --LSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDI  150 (601)
T ss_pred             --ccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCC
Confidence              34 999999999999999999999999999999988 5544 5888899999999999999999 999999997

>KOG1266|consensus

Probab=98.12  E-value=1.3e-07  Score=70.34  Aligned_cols=70  Identities=23%  Similarity=0.367  Sum_probs=58.8

Q ss_pred             CCCCCceeeEEEEecCCe-----EEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccC
Q psy13106        108 LTHPNIVQLIETFEDKHK-----VYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEAR--YLSKP  176 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~D  176 (177)
                      +.|.||++++.+|.+..+     ..++.||+..|++.+++++-    ..+....-.+|..||+.||.|||+..  |+|++
T Consensus       124 lvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgn  203 (458)
T KOG1266|consen  124 LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGN  203 (458)
T ss_pred             HHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCC
Confidence            579999999999975543     77888999999999999743    34778888899999999999999986  88876


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      +
T Consensus       204 l  204 (458)
T KOG1266|consen  204 L  204 (458)
T ss_pred             c
Confidence            4

>KOG1235|consensus

Probab=98.07  E-value=9.2e-06  Score=64.98  Aligned_cols=137  Identities=18%  Similarity=0.218  Sum_probs=90.4

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHH----------------HHHHHHHhhccccccccccccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE----------------NEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~----------------~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .+.|+..+.|.|++|+.+. |+.||||+.++.-.......+.                .=.++...+...+..+.++...
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            4579999999999999876 9999999976543221110000                1123344455566667777788


Q ss_pred             CCCcccccccCCCCC------ceeeEEEEecCCeEEEEEeccCCcchhH--HHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106         98 NNSNDKDKERLTHPN------IVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~~--~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                      +.+..++..-+.|-+      |++++..+  .....++|||++|..+.+  .+.+.+ ++...+...+.+...-+-+.| 
T Consensus       245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~~~qIf~~-  320 (538)
T KOG1235|consen  245 AKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAYLEQIFKT-  320 (538)
T ss_pred             HHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHHHHHHHhc-
Confidence            888777777777777      55555433  356789999999987765  444544 666666655555554444444 


Q ss_pred             CCccccC
Q psy13106        170 ARYLSKP  176 (177)
Q Consensus       170 ~giiH~D  176 (177)
                       |++|.|
T Consensus       321 -GffHaD  326 (538)
T KOG1235|consen  321 -GFFHAD  326 (538)
T ss_pred             -CCccCC
Confidence             799988

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.06  E-value=3.1e-05  Score=54.15  Aligned_cols=64  Identities=17%  Similarity=0.253  Sum_probs=37.3

Q ss_pred             CCCC--CceeeEEEEecCCeEEEEEeccC--CcchhHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCccccCC
Q psy13106        108 LTHP--NIVQLIETFEDKHKVYLVMELVT--GGELFDRIVEKGSYTEKDASMLIRQVLEAVDY-MHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~--~i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~-LH~~giiH~Dl  177 (177)
                      +..-  +++.++.+.  .  -++||||++  |..+.. +.... ++......++.+++..+.. +|..||+|+||
T Consensus        65 l~~~Gv~vP~p~~~~--~--~~ivME~I~~~G~~~~~-l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDL  133 (188)
T PF01163_consen   65 LYEAGVPVPKPYDYN--R--NVIVMEYIGEDGVPLPR-LKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDL  133 (188)
T ss_dssp             CCCTT-SS--EEEEE--T--TEEEEE--EETTEEGGC-HHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-
T ss_pred             HHHCCccCCcEEEEe--C--CEEEEEecCCCccchhh-HHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence            4444  577777553  2  369999998  555544 33222 2245566677788885554 68999999997

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601|consensus

Probab=97.96  E-value=6.3e-06  Score=65.40  Aligned_cols=129  Identities=16%  Similarity=0.150  Sum_probs=94.6

Q ss_pred             cccccceEEEeeecc--cceeEEEEEEE--ecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGT--GAFSEVRLAES--RENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~--g~~g~v~~~~~--~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..+...+.+...+|.  |.+|.+|.+..  ......+|+|.-+....... ...-.+|..-.+..               
T Consensus       110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i---------------  174 (524)
T KOG0601|consen  110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI---------------  174 (524)
T ss_pred             chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc---------------
Confidence            334446777888999  99999999988  88888999887322111110 01111222211111               


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHhCCccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLE----AVDYMHEARYLS  174 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~----~l~~LH~~giiH  174 (177)
                              -.|++.++.+..|++....|+.+|.| +.+|.++...... ++...++..+.+...    ||..+|+.+++|
T Consensus       175 --------~~~~~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~  245 (524)
T KOG0601|consen  175 --------DSHENPVRDSPAWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVH  245 (524)
T ss_pred             --------CccccccccCcccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccc
Confidence                    36889999999999999999999999 5688887765444 889999999999999    999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      .|+
T Consensus       246 ~~~  248 (524)
T KOG0601|consen  246 DDL  248 (524)
T ss_pred             ccc
Confidence            885

>PRK09902 hypothetical protein; Provisional

Probab=97.88  E-value=0.001  Score=47.35  Aligned_cols=116  Identities=16%  Similarity=0.207  Sum_probs=74.3

Q ss_pred             cccceeEEEEEEEecCCcEEEEEEEecc---cc--cccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         38 GTGAFSEVRLAESRENGTMFAVKIIDKK---AL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        38 g~g~~g~v~~~~~~~~~~~~avK~i~~~---~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      |+|+-+.|+.....  +..+-+|.....   ..  +.....+.+|...+..+..                     .+=| 
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~---------------------~GvP-   82 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELER---------------------AGVI-   82 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHH---------------------cCCC-
Confidence            45677777765543  234666654311   00  1234678899998888553                     2222 


Q ss_pred             ceeeEEEEecC----CeEEEEEeccCC-cchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        113 IVQLIETFEDK----HKVYLVMELVTG-GELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       113 i~~~~~~~~~~----~~~~lv~e~~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.+.......    -.-+||+|-+.+ .+|.+++...  .+.+...-..++.++...++-||+.|+.|+|+
T Consensus        83 VP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdl  154 (216)
T PRK09902         83 VPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCC  154 (216)
T ss_pred             CCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence            55554221111    236788887753 6788877553  34567777789999999999999999999996

>KOG0606|consensus

Probab=97.77  E-value=2.4e-05  Score=66.25  Aligned_cols=34  Identities=32%  Similarity=0.538  Sum_probs=30.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEE
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKI   61 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~   61 (177)
                      ...|..++.|..|+||-||.++++.+.+++|+|+
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki  115 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI  115 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc
Confidence            3478999999999999999999999999999964

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.75  E-value=0.00015  Score=53.19  Aligned_cols=113  Identities=22%  Similarity=0.267  Sum_probs=75.2

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--------c--------c-----cchhHHHHHHHHHhhccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--------K--------G-----KEDSLENEIKVLRRFSQSVH   89 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--------~--------~-----~~~~~~~e~~~~~~~~~~~~   89 (177)
                      +.+...||-|--+.||.|... .+.+++||+=.....        .        .     +.....+|..+|..      
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~------  165 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQR------  165 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHH------
Confidence            456788999999999999876 578899997422100        0        0     01234567777766      


Q ss_pred             ccccccccCCCcccccccCCCC--CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy13106         90 NRLDETNDNNSNDKDKERLTHP--NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~L  167 (177)
                                        +...  .++.++++    +.-.++||+++|..|...-     ++......++..|++-+.-+
T Consensus       166 ------------------L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~  218 (304)
T COG0478         166 ------------------LYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKA  218 (304)
T ss_pred             ------------------hhhcCCCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHH
Confidence                              3333  67777754    4457999999885554321     23445556666777777777


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      -..||||+|+
T Consensus       219 ~~~GiVHGDl  228 (304)
T COG0478         219 YRRGIVHGDL  228 (304)
T ss_pred             HHcCccccCC
Confidence            7999999996

>PLN02876 acyl-CoA dehydrogenase

Probab=97.68  E-value=0.00053  Score=58.48  Aligned_cols=113  Identities=18%  Similarity=0.269  Sum_probs=74.6

Q ss_pred             EEeeecccceeEEEEEEEecCC--cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         33 LKELLGTGAFSEVRLAESRENG--TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~--~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      .++.++.|.+..+|+......+  ..+++|..+..........+.+|..+++.+.                       .|
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~-----------------------~~   98 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG-----------------------EH   98 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh-----------------------hc
Confidence            3677899999999988765332  3567776543322222346788999988832                       24


Q ss_pred             CC--ceeeEEEEecC---CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        111 PN--IVQLIETFEDK---HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       111 ~~--i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      ++  +++++.+..+.   +..|+|||+++|..+.+..  ...++......+..+++++|..||..
T Consensus        99 ~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~--~~~~~~~~r~~l~~~l~~~La~LH~v  161 (822)
T PLN02876         99 TDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPK--LPGVAPERRRAIYRATAKVLAALHSA  161 (822)
T ss_pred             CCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCcc--CCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            44  46666665543   4578999999875443311  11245667778899999999999975

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.66  E-value=0.0053  Score=43.42  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=29.9

Q ss_pred             cccceEEEeeecccce-eEEEEEEEecCCcEEEEEEE
Q psy13106         27 IEEKYILKELLGTGAF-SEVRLAESRENGTMFAVKII   62 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~-g~v~~~~~~~~~~~~avK~i   62 (177)
                      -...++.++.||.|.- |.||+++..  ++.||+|++
T Consensus        35 h~~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf   69 (207)
T PF13095_consen   35 HGDDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLF   69 (207)
T ss_pred             CCCcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEe
Confidence            3478999999999999 999999876  679999994

>KOG1023|consensus

Probab=97.64  E-value=0.00016  Score=57.43  Aligned_cols=69  Identities=19%  Similarity=0.290  Sum_probs=60.2

Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY-LSKP  176 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~gi-iH~D  176 (177)
                      +.|.|+.++++...+....+++.+||..|+|.+.+.. ...++..-...++++|+.||+|+|.--| .|+-
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~   74 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGA   74 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeee
Confidence            7899999999999999999999999999999998875 3457777788899999999999998655 6754

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.63  E-value=0.00011  Score=59.00  Aligned_cols=135  Identities=18%  Similarity=0.316  Sum_probs=74.6

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcc-----------------------ccccc
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ-----------------------SVHNR   91 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~-----------------------~~~~~   91 (177)
                      +.|++++-|.||.|+..+ |+.||||+..+...    ..+...+.+++.+..                       .+..+
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~----~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIR----ERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChH----HHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            578999999999999886 89999999865432    233333333333332                       22222


Q ss_pred             ccccccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHH--HHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         92 LDETNDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDR--IVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        92 ~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                      .+....+.+...+.+-+ +.+++.-+.=+++..+.-.++|||++|..+.+.  +... ..+.+.+.....++.  +.-+=
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~-g~d~k~ia~~~~~~f--~~q~~  282 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA-GIDRKELAELLVRAF--LRQLL  282 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc-CCCHHHHHHHHHHHH--HHHHH
Confidence            23333333333333333 333332222233345667899999999888876  4443 355444332222211  12223


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ..|++|.|.
T Consensus       283 ~dgffHaDp  291 (517)
T COG0661         283 RDGFFHADP  291 (517)
T ss_pred             hcCccccCC
Confidence            368999884

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.55  E-value=0.00055  Score=47.23  Aligned_cols=105  Identities=25%  Similarity=0.259  Sum_probs=66.4

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      .+.+.|+.|++|.||++.+.  +..+++|+-...   .....+..|.+++..                        +...
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d---s~r~~l~kEakiLei------------------------l~g~   75 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRD---SPRRNLEKEAKILEI------------------------LAGE   75 (201)
T ss_pred             hhhhhhhcccccEEEEeecc--CceEEEEEecCC---cchhhHHHHHHHHHH------------------------hhhc
Confidence            45667999999999999997  558899985432   345678888888877                        3333


Q ss_pred             Cc-eeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        112 NI-VQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       112 ~i-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                      ++ +.++.+..+    ++.|||+.|..|.+.....   +.+.+.    .++..---|-..||-|+.
T Consensus        76 ~~~p~vy~yg~~----~i~me~i~G~~L~~~~~~~---~rk~l~----~vlE~a~~LD~~GI~H~E  130 (201)
T COG2112          76 GVTPEVYFYGED----FIRMEYIDGRPLGKLEIGG---DRKHLL----RVLEKAYKLDRLGIEHGE  130 (201)
T ss_pred             CCCceEEEechh----hhhhhhhcCcchhhhhhcc---cHHHHH----HHHHHHHHHHHhccchhh
Confidence            33 455554332    3459999988887764321   223332    233443334456777754

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.44  E-value=0.0037  Score=44.80  Aligned_cols=46  Identities=26%  Similarity=0.343  Sum_probs=34.6

Q ss_pred             CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        124 HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       124 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ...+++|||++|..|.+...    +++    .+...+..++.-+|+.|++|+|.
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~  161 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDP  161 (229)
T ss_pred             eEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCC
Confidence            45678999999988766531    222    24456778899999999999995

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.43  E-value=0.0066  Score=43.27  Aligned_cols=104  Identities=20%  Similarity=0.273  Sum_probs=73.9

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      ++.++.|..+.+|......  ..+++|.....   .....+..|..++..+...                     . ..+
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~---------------------~-~pv   54 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP---DAAERLRREAAVLRQLAEH---------------------G-IPV   54 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH---HHHHHHHHHHHHHHHHHHT---------------------T-SBS
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhc---------------------C-CCC
Confidence            4678999999999998764  58899986433   2335667777777764431                     1 145


Q ss_pred             eeeEEEEe---cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        114 VQLIETFE---DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       114 ~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +.++....   .....+++|++++|..+..      ..+......++.++...+.-||+.
T Consensus        55 P~~~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   55 PRVLAFDTSDEFNGFPYLLMEYIPGRPLDD------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             --EEEEEEETEETSEEEEEEEEESSEEHHH------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ceEEeecccccccccceEEEEEeccccccc------cccccccccccccchhhhhhcccc
Confidence            66665332   3345799999999988777      367778888889999999999986

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.25  E-value=0.0072  Score=44.05  Aligned_cols=114  Identities=24%  Similarity=0.240  Sum_probs=67.6

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEeccccccc-----------------c------hhHHHHHHHHHhhcccccccc
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-----------------E------DSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-----------------~------~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      .|.+|.-+.||+|.. ..+..+|+|++........                 .      .....|...|+....      
T Consensus        55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~e------  127 (268)
T COG1718          55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYE------  127 (268)
T ss_pred             eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHH------
Confidence            566777778888875 3578999999853311000                 0      111234433333221      


Q ss_pred             cccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcch-hHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q psy13106         93 DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL-FDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-A  170 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~  170 (177)
                                      .+-.+++++.+.    .-.++|||+..... --.++.-+ +...++..+..++++.+.-|-. .
T Consensus       128 ----------------AGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~-~e~~e~~~~~~~~v~~~~~l~~~a  186 (268)
T COG1718         128 ----------------AGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVP-LELEEAEGLYEDVVEYMRRLYKEA  186 (268)
T ss_pred             ----------------cCCCCCCceeec----CCeEEEEeccCCCCCCCCcccCC-cCchhHHHHHHHHHHHHHHHHHhc
Confidence                            234556666553    24699999944211 11222222 3344778888899999988877 9


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      |+||+||
T Consensus       187 ~LVHgDL  193 (268)
T COG1718         187 GLVHGDL  193 (268)
T ss_pred             Ccccccc
Confidence            9999997

>PRK10593 hypothetical protein; Provisional

Probab=97.12  E-value=0.017  Score=43.40  Aligned_cols=109  Identities=10%  Similarity=0.018  Sum_probs=72.2

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      -.-.+.|+.|..+.||.....  +..+.+|..+.   ......+..|...++.+..                     ...
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~---~~~~~~~~~Ea~~L~~L~~---------------------~~~   69 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDS--QGNPMPLMARS---FSTPGVAQQEAWKLSMLAR---------------------SGT   69 (297)
T ss_pred             hheeeecCCccceeEEEEEcC--CCCEEEEEecc---cccchHHHHHHHHHHHHcc---------------------CCC
Confidence            334667999999999987543  23466676422   1123567888888877432                     112


Q ss_pred             CCceeeEEEEec---CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        111 PNIVQLIETFED---KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       111 ~~i~~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      -.++++++....   .+..+++||++++.++.+.     .........+..+++++|.-||..
T Consensus        70 vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~-----~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         70 VRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAP-----ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             CCcCcEEEEeccCCcCCCeEEEEeccCCEecCCC-----CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            457777776543   3568999999999877762     123444556677888999999974

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.07  E-value=0.012  Score=42.49  Aligned_cols=103  Identities=16%  Similarity=0.194  Sum_probs=68.7

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      ..|+.|..+.||+.    .+..+++|..+..   .....+.+|.+++..+..                      ..-.++
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~---~~~~~i~~E~~~l~~l~~----------------------~glpvP   57 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPG---FDKETIKREFDASRKVFS----------------------LGIPTP   57 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCC---CCHHHHHHHHHHHHHHHH----------------------cCCCCC
Confidence            57899999999973    2446778876432   233557888888877431                      123356


Q ss_pred             eeEEEEecCCeEEEEEeccCCcc-hhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGE-LFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +.+.+....+...++|++++|.+ +...+    ..+......++.+++..+.-||+.
T Consensus        58 ~~~~~~~~~~~~glv~e~i~G~~~~~~~~----~~~~~~~~~l~~~la~~l~~lH~~  110 (226)
T TIGR02172        58 HPFDLVEDGGRLGLIYELIVGKRSFSRII----SDNPSRLEEIAKIFAEMAKKLHST  110 (226)
T ss_pred             ceEEEEecCCeeeeeeeecCCccchhhhh----cCCHHHHHHHHHHHHHHHHHHhCC
Confidence            77777777777889999998863 32222    123445556778888888888974

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0606|consensus

Probab=96.68  E-value=0.00029  Score=60.02  Aligned_cols=130  Identities=15%  Similarity=0.204  Sum_probs=89.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .....+.+.+.+.+.+|+++.++.+....++...++++......  .+....+..+-.+..                   
T Consensus       799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i-------------------  859 (1205)
T KOG0606|consen  799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILI-------------------  859 (1205)
T ss_pred             ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccc-------------------
Confidence            44556678888899999999999998887776666655322110  000011111100000                   


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ...+|-++...-.+......+++++++++++|...+...++.++.-++.+...+...++|||...+.|+|+
T Consensus       860 -----~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~  930 (1205)
T KOG0606|consen  860 -----TPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDL  930 (1205)
T ss_pred             -----cCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccc
Confidence                 02344444444334455678999999999999999988888888999999999999999999999999985

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.66  E-value=0.088  Score=41.35  Aligned_cols=88  Identities=17%  Similarity=0.143  Sum_probs=57.3

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEeccc------ccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKA------LKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~------~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.||.|.+..||++.....++.+.||.-....      +.-.......|.+.+..+..                     
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~---------------------   89 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAK---------------------   89 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHh---------------------
Confidence            467999999999999986444589999853211      11123455667777776432                     


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcc-hhHHHHh
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGE-LFDRIVE  144 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~  144 (177)
                      .....+++++.+  +....+++||++++.. +.+.+..
T Consensus        90 ~~p~~VPkV~~~--D~~~~~lVME~L~~~~~lr~~Ll~  125 (401)
T PRK09550         90 YVPDLVPKVYHY--DEELAVTVMEDLSDHKILRKGLID  125 (401)
T ss_pred             hCCCCCCeEEEE--CCCCCEEEEecCCCccHHHHHHhc
Confidence            234567888877  4455789999998644 3344433

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.58  E-value=0.035  Score=40.26  Aligned_cols=100  Identities=19%  Similarity=0.215  Sum_probs=65.0

Q ss_pred             eecccce-eEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         36 LLGTGAF-SEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        36 ~lg~g~~-g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      .|..|.. ..||+....  +..+.+|..+...    ...+.+|..+++.+..                       +-.++
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~-----------------------~~~vP   55 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP----TYELEREAERLRWLAG-----------------------KLPVP   55 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc----ccchHHHHHHHHHHHh-----------------------cCCCC
Confidence            3445555 678888653  3678888753321    3456778888877442                       24567


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +++.+...++.-+++|++++|.++.+...      ......++.++...+.-||+.
T Consensus        56 ~v~~~~~~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~l~~~l~~lH~i  105 (244)
T cd05150          56 EVIDYGSDDGRAWLLTSAVPGVPAAALWE------ELEPERLVDALAEALRRLHAL  105 (244)
T ss_pred             eEEEEEecCCccEEEEEeeCCccHhHhhc------ccCHHHHHHHHHHHHHHHhcC
Confidence            77877766667889999999877754321      111234677788888888864

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.33  E-value=0.21  Score=35.32  Aligned_cols=117  Identities=17%  Similarity=0.266  Sum_probs=75.4

Q ss_pred             eeecccceeEEEEEEEecCCcEEEEEEEeccc---------------ccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         35 ELLGTGAFSEVRLAESRENGTMFAVKIIDKKA---------------LKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~---------------~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..||+|+.=.||.-   -.+...+||+.....               ......+..+|+........             
T Consensus         7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~-------------   70 (199)
T PF10707_consen    7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSL-------------   70 (199)
T ss_pred             cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhh-------------
Confidence            45778877666643   234567888876554               01123455667766665431             


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCC------cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG------GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~------~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                           .+...+.+|++++++.+++.-.-+|+|.+.+      .+|.+++.... ++. .....+.   +-.+||-+++|+
T Consensus        71 -----~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~-~~~~~L~---~f~~~l~~~~Iv  140 (199)
T PF10707_consen   71 -----RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-LTE-ELRQALD---EFKRYLLDHHIV  140 (199)
T ss_pred             -----ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-ccH-HHHHHHH---HHHHHHHHcCCe
Confidence                 1125688999999999999888899988753      56778875543 555 4333333   445577888898


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      .+||
T Consensus       141 ~~dl  144 (199)
T PF10707_consen  141 IRDL  144 (199)
T ss_pred             ecCC
Confidence            8886

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2270|consensus

Probab=95.83  E-value=0.082  Score=41.15  Aligned_cols=113  Identities=23%  Similarity=0.321  Sum_probs=69.3

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEeccccc---------------------ccc----hhHHHHHHHHHhhcccccc
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALK---------------------GKE----DSLENEIKVLRRFSQSVHN   90 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~---------------------~~~----~~~~~e~~~~~~~~~~~~~   90 (177)
                      .|..|--+.||.+... +|..+|||+++.+..-                     +..    -..+.|++-+.+       
T Consensus       151 CiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkR-------  222 (520)
T KOG2270|consen  151 CISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKR-------  222 (520)
T ss_pred             ccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHH-------
Confidence            3556777789988654 5677999998543210                     000    123456666665       


Q ss_pred             cccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhH--HHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         91 RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~--~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                       ++...|+.+--...  ..-.|||+|+ |.+-+.  .| ..-.++...++.+-.|++.-|.-|-
T Consensus       223 -----------------l~~aGIP~PePIlL--k~hVLVM~Fl-Grdgw~aPkL-Kd~~ls~~ka~~~Y~~~v~~MR~lY  281 (520)
T KOG2270|consen  223 -----------------LNNAGIPCPEPILL--KNHVLVMEFL-GRDGWAAPKL-KDASLSTSKARELYQQCVRIMRRLY  281 (520)
T ss_pred             -----------------HHhcCCCCCCceee--ecceEeeeec-cCCCCcCccc-ccccCChHHHHHHHHHHHHHHHHHH
Confidence                             55555554433332  2346899999 433322  23 2234777788888888888887665


Q ss_pred             -hCCccccCC
Q psy13106        169 -EARYLSKPR  177 (177)
Q Consensus       169 -~~giiH~Dl  177 (177)
                       ..+.||.||
T Consensus       282 ~~c~LVHADL  291 (520)
T KOG2270|consen  282 QKCRLVHADL  291 (520)
T ss_pred             HHhceeccch
Confidence             479999987

>KOG1033|consensus

Probab=94.89  E-value=0.0098  Score=47.29  Aligned_cols=51  Identities=18%  Similarity=0.232  Sum_probs=43.9

Q ss_pred             CeEEEEEeccCCcchhHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        124 HKVYLVMELVTGGELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       124 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .++|+.|++|...+|.+++..+.   ..+......++.|+..|++|   +|.+|+|+
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdl  382 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDL  382 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhc
Confidence            46899999999999999997443   26677888999999999999   99999996

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.54  E-value=0.91  Score=35.29  Aligned_cols=105  Identities=15%  Similarity=0.030  Sum_probs=61.1

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEeccc------ccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKA------LKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~------~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .||.|....||++.....++.++||.-....      ++-...+...|...++....                     +.
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~---------------------~~   60 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGE---------------------HV   60 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhc---------------------cC
Confidence            4799999999999975433678998753211      12223455677777766433                     22


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCC-cchhHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTG-GELFDRIVEKGSYTEKDASMLIRQVLEAV  164 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  164 (177)
                      ...+++++.+  ++....++||+++. ..|.+.+.... .....+..+..-++..+
T Consensus        61 P~~vP~vy~~--D~e~~~~vMEdL~~~~ilR~~Li~g~-~~p~~A~~iG~~La~tl  113 (370)
T TIGR01767        61 PHLVPRIFHF--DTEMAVTVMEDLSHHKIARKGLIEGE-NYPHLARHIGEFLAKTL  113 (370)
T ss_pred             ccccCeEEEE--ccccceehHhhCccchHHHHHHHcCC-CChHHHHHHHHHHHHHH
Confidence            3356777765  55666799999965 33444444432 33444444433333333

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG0576|consensus

Probab=94.53  E-value=0.0093  Score=48.97  Aligned_cols=115  Identities=12%  Similarity=0.236  Sum_probs=76.6

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      +....-+++++++++++.+...+.... .+++...      -...-+++++.+                        ++|
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~------l~~rl~~eLLdK------------------------~n~  292 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT------LSRRLAIELLDK------------------------VNN  292 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc------hhhHHHHHHHHH------------------------ccC
Confidence            445556788999999998876554433 5554322      344557788888                        899


Q ss_pred             CC-ceeeEEEEecCCeEEEEEeccCCc-c-hhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        111 PN-IVQLIETFEDKHKVYLVMELVTGG-E-LFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       111 ~~-i~~~~~~~~~~~~~~lv~e~~~~~-~-L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                      || .+..++..+...+.++.|+++.++ + ....-...-.+.........+.-+.+++++|+.-=+|+|
T Consensus       293 P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d  361 (829)
T KOG0576|consen  293 PNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD  361 (829)
T ss_pred             CCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc
Confidence            99 666666666678899999999665 1 111111112244555666677778899999987666775

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.30  E-value=0.72  Score=33.09  Aligned_cols=101  Identities=18%  Similarity=0.253  Sum_probs=58.8

Q ss_pred             EeeecccceeEEEEEEEec-CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         34 KELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      ++.|..|-...+|++.... .+..+.+|+.....  .......+|..++..+..                       +.-
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~--~~~~d~~~E~~~~~~l~~-----------------------~gl   57 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT--ELIIDRERELRIHKLLSK-----------------------HGL   57 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc--cceecHHHHHHHHHHHHh-----------------------CCC
Confidence            4567788888999886543 35678888754221  111233467777777432                       222


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      .++++.... +   .++|||++|.++...-     +..   ..++.+++..|+-||...
T Consensus        58 ~P~v~~~~~-~---~~l~e~i~G~~l~~~~-----~~~---~~~~~~la~~l~~lH~~~  104 (235)
T cd05157          58 APKLYATFQ-N---GLIYEFIPGRTLEPED-----LRN---PKIYRLIARELAKLHSIK  104 (235)
T ss_pred             CCeEEEEeC-C---cEEEEeeCCCcCCHHH-----ccC---hHHHHHHHHHHHHHhccc
Confidence            445554432 2   3799999886654321     111   225566778888888654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK12396 5-methylribose kinase; Reviewed

Probab=94.09  E-value=0.61  Score=36.71  Aligned_cols=89  Identities=17%  Similarity=0.117  Sum_probs=58.0

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecc-----cccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKK-----ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~-----~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .+.||.|.-..||++.....++.++||.-...     .++-...+...|...++....                     +
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~---------------------~   92 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEE---------------------L   92 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHh---------------------h
Confidence            67899999999999998544567888874321     112223566677787876543                     3


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCC-cchhHHHHhc
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTG-GELFDRIVEK  145 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~  145 (177)
                      .-..+++++.+  ++....++||+++. ..|.+.+...
T Consensus        93 ~P~~VP~vy~~--D~e~~~~vMEdL~~~~ilR~~Li~G  128 (409)
T PRK12396         93 APGLVPKVYLF--DSVMNCCVMEDLSDHTILRTALINH  128 (409)
T ss_pred             CCCcCCeEEEE--CcHHhhHHHHhCcccHHHHHHHHcC
Confidence            34457777766  56667899999954 3344444433

>KOG1035|consensus

Probab=93.77  E-value=0.47  Score=42.05  Aligned_cols=67  Identities=18%  Similarity=0.203  Sum_probs=54.2

Q ss_pred             CCCCCceeeEEEEecCCeE----EEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        108 LTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                      ..|+|+..++.+.......    .+..++|..-++.+.+...+..+....+.+..+++.||.|+|+....|
T Consensus       239 ~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~  309 (1351)
T KOG1035|consen  239 IAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEH  309 (1351)
T ss_pred             hccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence            7899999999887654332    234467778888888888888999999999999999999999975444

>PLN02756 S-methyl-5-thioribose kinase

Probab=93.43  E-value=3  Score=33.08  Aligned_cols=106  Identities=12%  Similarity=0.029  Sum_probs=63.6

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccc------cccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL------KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~------~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.||.|....||+....  +..+.||.-.....      .....+...|...+.....                    
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~--------------------   93 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGR--------------------   93 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhh--------------------
Confidence            4678999999999998763  45688887652211      1123344455666655321                    


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCC--cchhHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTG--GELFDRIVEKGSYTEKDASMLIRQVLEAV  164 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~--~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  164 (177)
                       .....+++++.+..  ...+++||++++  ..+.+-+.... .....+..+...++..|
T Consensus        94 -~~p~~VPkVy~~de--d~~vlvME~L~~~~~ilr~~Ll~G~-~~p~~a~~ig~~la~tL  149 (418)
T PLN02756         94 -LCPDHVPEVYHFDR--TMALIGMRYLEPPHIILRKGLIAGI-EYPLLAEHMSDYMAKTL  149 (418)
T ss_pred             -cCCCCCCeEEEECC--CCCEEEEeecCCcceehhhhhccCC-CCHHHHHHHHHHHHHHH
Confidence             22357888887754  446788999976  34555443332 22455555655566654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.62  E-value=0.61  Score=33.63  Aligned_cols=100  Identities=13%  Similarity=0.161  Sum_probs=57.2

Q ss_pred             eeeccccee-EEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         35 ELLGTGAFS-EVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        35 ~~lg~g~~g-~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      +.++.|+.. .||..     +..+.+|..+..   .....+.+|..++..+...                    + .-.+
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~---~~~~~~~~E~~~l~~L~~~--------------------~-~v~v   53 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA---GYAGQVRKEQRWLPRLAPH--------------------L-PLPV   53 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCcc---chHHHHHHHHHHHHHHhcc--------------------C-CCCC
Confidence            456655555 47865     234667764321   1234678888888774321                    0 0123


Q ss_pred             eeeEEEEecC---CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        114 VQLIETFEDK---HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       114 ~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +.++......   ...|++|++++|.++.+..     ...  ...+..++...+.-||+.
T Consensus        54 P~~~~~~~~~~~~~~~~~l~~~i~G~~l~~~~-----~~~--~~~l~~~la~~l~~LH~i  106 (235)
T cd05155          54 PEPLGKGEPGEGYPWPWSVYRWLEGETATAAA-----LSD--PSEFAEDLADFLAALRQI  106 (235)
T ss_pred             CceeecCCCccCCCcceEEEEeecCCCCCccc-----cCC--HHHHHHHHHHHHHHHhCC
Confidence            4444433221   2458899999998775531     111  225677788888888865

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=92.29  E-value=2.3  Score=32.03  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=47.3

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      +-.+.++.|....+|+..  ..++.+.||+-.    ......+..|..-++.+.+                     ...-
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~----~~~~~~f~~Ea~gL~~L~~---------------------~~~~   72 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS----ESGRDMFEGEAEGLKALAE---------------------ANPI   72 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE----GGGCCHHHHHHHHHHHHCH---------------------TTTS
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC----hhhHHHHHHHHHHHHHHHh---------------------cCCC
Confidence            345678889889998876  567789999854    2233556777776666432                     3455


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCc
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGG  136 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~  136 (177)
                      .+++++.+....+.-|++|||++.+
T Consensus        73 ~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   73 RVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             BS--EEEEEE-SSCCEEEEE-----
T ss_pred             CCCeEEEEEeecCCceEEEEeecCC
Confidence            6889999888777779999999654

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG1033|consensus

Probab=92.08  E-value=0.02  Score=45.61  Aligned_cols=73  Identities=22%  Similarity=0.354  Sum_probs=52.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .....+.....+|.|+||.|+.+..+..+-.++||.|.............++..-+                        
T Consensus        46 r~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~------------------------  101 (516)
T KOG1033|consen   46 REANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSL------------------------  101 (516)
T ss_pred             hhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccch------------------------
Confidence            34456788899999999999999888777789999886554333333444443333                        


Q ss_pred             ccCCCCCceeeEEEEec
Q psy13106        106 ERLTHPNIVQLIETFED  122 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~  122 (177)
                      +.+.|++++.+...|..
T Consensus       102 a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen  102 AEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhhcccchhhheeceec
Confidence            33889999999887753

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=90.77  E-value=0.12  Score=33.36  Aligned_cols=46  Identities=28%  Similarity=0.517  Sum_probs=34.2

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhh
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF   84 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~   84 (177)
                      .+.|++|+.|.||+|..+. |+.||||+..+..    ...+...+.++..+
T Consensus        16 ~~PlasASiaQVh~a~l~~-g~~VaVKV~rP~i----~~~i~~Dl~~l~~~   61 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKD-GEEVAVKVQRPGI----EEQIEADLRILRRL   61 (119)
T ss_pred             cchhhheehhhheeeeecc-cchhhhhhcchHH----HHHHHHHHHHHHHH
Confidence            4579999999999998865 8999999975433    34455566666653

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=90.02  E-value=2.6  Score=30.78  Aligned_cols=98  Identities=15%  Similarity=0.140  Sum_probs=55.3

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCcee
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQ  115 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~  115 (177)
                      .+..|..+.+|+..  .++..+.+|...... ....-...+|..+++.+..                       +.-.++
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~-~~~~~~r~~E~~~l~~l~~-----------------------~g~~P~   56 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVC-KALGVDRQREYQILQALSA-----------------------LGLAPK   56 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCccc-ccccCcHHHHHHHHHHHHh-----------------------cCCCCc
Confidence            34567777888776  346678888753221 1111234678888887432                       111234


Q ss_pred             eEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        116 LIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       116 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      ++...  .  -+++|+|++|..+....     +..   ...+.+++..|.-||+..
T Consensus        57 ~i~~~--~--~~~v~e~i~G~~~~~~~-----~~~---~~~~~~la~~l~~lH~~~  100 (256)
T TIGR02721        57 PILVN--E--HWLLVEWLEGEVITLDQ-----FVA---LDLLLELAALLHQLHSQP  100 (256)
T ss_pred             eEEEe--C--CEEEEEeccCccccccc-----ccC---chhHHHHHHHHHHHhCCC
Confidence            44332  2  26899999886554310     101   124577888888888764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=89.54  E-value=3.4  Score=30.75  Aligned_cols=98  Identities=18%  Similarity=0.192  Sum_probs=56.3

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.+..|....+|+...  .+..+++|....    .....+..|..++..+...                     + -.+
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~----~~~~~~~~e~~~l~~L~~~---------------------g-~~v   70 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK----VSAEELPFFLALLDHLAER---------------------G-LPV   70 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCC----CChHhccHHHHHHHHHHHC---------------------C-CCC
Confidence            55677787788898753  345688887643    1234556677766664321                     1 112


Q ss_pred             eeeEEE------EecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        114 VQLIET------FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       114 ~~~~~~------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      ++++..      ...++..++++++++|..+..       .+.    ....++...|+-||..
T Consensus        71 p~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~-------~~~----~~~~~lg~~La~lH~~  122 (296)
T cd05153          71 PRPIADRDGEYLSELAGKPAALVEFLAGEHLTR-------PTA----AHCRQIGEALARLHLA  122 (296)
T ss_pred             CccccCCCCcEeeeeCCceEEEEEeCCCCCCCC-------CCH----HHHHHHHHHHHHHHHH
Confidence            333221      123456789999998865532       121    2445677777777753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=88.73  E-value=5  Score=30.02  Aligned_cols=102  Identities=12%  Similarity=0.111  Sum_probs=60.2

Q ss_pred             EeeecccceeEEEEEEEec------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         34 KELLGTGAFSEVRLAESRE------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++.+..|-...+|+.....      .++.+++|+.....  .......+|..++..+..                     
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~r~~E~~~~~~l~~---------------------   59 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV--ELLIDRERELVVFARLSE---------------------   59 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC--cceechHHHHHHHHHHHh---------------------
Confidence            3456667777888776543      25788889864322  122345677777777442                     


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                        ..-.++++..+..    .++++|++|..+....     +..   ...+.+++..|+-||+..+
T Consensus        60 --~g~~P~~~~~~~~----~~v~e~i~G~~l~~~~-----~~~---~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          60 --RNLGPKLYGIFPN----GRIEEFIPSRTLTTEE-----LRD---PDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             --CCCCCceEEEeCC----CchhheeCCCcCCHhH-----cCC---cHHHHHHHHHHHHhhCCCC
Confidence              1123455555432    2578999886665421     111   2356788999999998643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2268|consensus

Probab=87.55  E-value=0.11  Score=39.82  Aligned_cols=30  Identities=17%  Similarity=0.344  Sum_probs=23.6

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEE
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKI   61 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~   61 (177)
                      +.++.+||-|.-+-||.+-+. .|.+.++|+
T Consensus        94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~  123 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE-EGNPLILKL  123 (465)
T ss_pred             hhhccccccccccceEEEecC-CCCchhHHH
Confidence            567889999999999999876 355667665

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=84.53  E-value=6.7  Score=30.04  Aligned_cols=108  Identities=11%  Similarity=0.154  Sum_probs=57.0

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEec-ccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTH  110 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  110 (177)
                      .+++.+..|....+|.....  ++.+.+. .+. ...-.......+|..++..+.                        -
T Consensus        28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~------------------------~   80 (321)
T COG3173          28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALL------------------------D   80 (321)
T ss_pred             ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhc------------------------C
Confidence            34444544444445544433  6777777 321 111122345567777777732                        2


Q ss_pred             CCceee--EEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCC
Q psy13106        111 PNIVQL--IETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLI-RQVLEAVDYMHEAR  171 (177)
Q Consensus       111 ~~i~~~--~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~LH~~g  171 (177)
                      ..++..  ++...+.  ...|.+|++++|..+......     ......++ ..+.+.|.-||+-.
T Consensus        81 ~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~-----~~~~~~~~~~~l~~~La~LH~id  141 (321)
T COG3173          81 VDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP-----ESLGRQFALDALADFLAELHSID  141 (321)
T ss_pred             CCCCCcccccccccCCCCCceEEEEEecceeccCcCCc-----ccchHHHHHHHHHHHHHHHhCCC
Confidence            233333  3333222  356999999988644443321     11113344 48999999999753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=82.48  E-value=17  Score=27.37  Aligned_cols=99  Identities=14%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      ..+.++.|....+|+...  ++..+.+|......   ....+..|..++..+...                      .-.
T Consensus        26 ~i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~---~~~~i~~e~~~l~~L~~~----------------------g~p   78 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT--DVGRYILTLYEKRV---KAEELPFFLALTTHLAAR----------------------GLP   78 (307)
T ss_pred             eccccCCccccceEEEEe--CCCcEEEEEecCCC---CHHHHHHHHHHHHHHHHC----------------------CCC
Confidence            355677787788898753  24467788764321   223445566555553211                      011


Q ss_pred             ceeeEEE------EecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        113 IVQLIET------FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       113 i~~~~~~------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                      +++++..      ....+..+++|+|++|..+..       ....    ...++...|+-||.
T Consensus        79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~-------~~~~----~~~~~G~~LA~lH~  130 (307)
T TIGR00938        79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGR-------PTAM----HCRPVGEVLAWMHL  130 (307)
T ss_pred             CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCC-------CCHH----HHHHHHHHHHHHHh
Confidence            2222221      112356789999998865431       1111    24566677777775

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.34  E-value=8.4  Score=28.41  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=25.5

Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcch
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGEL  138 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  138 (177)
                      -+--.+++++.+..+..+.|+||+|++-+.+
T Consensus        68 s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          68 SNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             cCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            3456788999999999999999999976444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	177
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-34
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		9e-31
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-30
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-30
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-30
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-27
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-20
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-20
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-20
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-20
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-19
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-19
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-19
3kk9_A	282	Camkii Substrate Complex B Length = 282		3e-19
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-19
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		7e-19
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-18
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-18
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		4e-18
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-17
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-17
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-17
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-17
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-17
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-17
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-17
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-17
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-17
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		9e-17
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-16
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-16
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-16
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-16
3soa_A	444	Full-Length Human Camkii Length = 444		2e-16
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-16
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-16
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-16
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		6e-16
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		6e-16
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		8e-16
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-15
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-15
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-15
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-15
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-15
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-15
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-15
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-15
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-15
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-15
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-15
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-15
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-15
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-15
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-15
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-15
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-15
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-15
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-15
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-15
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-15
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		4e-15
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		4e-15
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-14
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-14
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-14
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-14
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-14
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-14
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-14
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-14
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-14
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-14
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		4e-14
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-14
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-14
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-14
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-14
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-14
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-14
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		5e-14
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		6e-14
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		6e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-13
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-13
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-13
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		7e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		6e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-12
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-11
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-11
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-11
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-11
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-11
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-11
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-11
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-11
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-11
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-11
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-11
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-11
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-11
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-11
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		6e-11
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-11
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		6e-11
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		6e-11
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-11
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-11
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		8e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		8e-11
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		8e-11
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-10
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-10
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-10
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-10
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-10
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-10
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		1e-10
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-10
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-10
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-10
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-10
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-10
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-10
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-10
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-10
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		5e-10
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		6e-10
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		6e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		6e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		7e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		7e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		7e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		7e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		7e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		7e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		7e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		8e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		8e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		8e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		8e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		8e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		8e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		9e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		9e-10
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-09
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-09
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-09
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-09
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		7e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		7e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		7e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		8e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		8e-09
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		8e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		8e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		8e-09
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-09
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		8e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		8e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		9e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		9e-09
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		9e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		9e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-08
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-08
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		6e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		6e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		6e-08
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		6e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		7e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		7e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-08
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-08
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		8e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-07
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-07
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-07
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		1e-07
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-07
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-07
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		2e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-07
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-07
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-07
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		2e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-07
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		2e-07
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		2e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-07
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-07
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-07
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-07
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-07
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-07
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		5e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		5e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		5e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-07
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		7e-07
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		8e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-07
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		3e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		6e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		9e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-04
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		5e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		6e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		6e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		7e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		7e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		7e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		7e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		8e-04

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 94/142 (66%), Gaps = 24/142 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I++ +  KE LGTGAFSEV LAE +  G +FAVK I KKALKGKE S+ENEI VLR+   
Sbjct: 20  IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK--- 76
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + H NIV L + +E  + +YLVM+LV+GGELFDRIVEKG
Sbjct: 77  ---------------------IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG 115
Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            YTEKDAS LIRQVL+AV Y+H
Sbjct: 116 FYTEKDASTLIRQVLDAVYYLH 137

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  129 bits (324), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I KKAL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK--- 72
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I K+AL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK--- 72
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I K+AL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK--- 72
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 24/143 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y  +++LGTGAFSEV LAE +    + A+K I K+AL+GKE S+ENEI VL +   
Sbjct: 16  IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK--- 72
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                + HPNIV L + +E    +YL+M+LV+GGELFDRIVEKG
Sbjct: 73  ---------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            YTE+DAS LI QVL+AV Y+H+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD 134

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 25/144 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +I + +I  E+LG+GAFSEV L + R  G +FA+K I KK+   ++ SLENEI VL++  
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI-KKSPAFRDSSLENEIAVLKK-- 62
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                 + H NIV L + +E     YLVM+LV+GGELFDRI+E+
Sbjct: 63  ----------------------IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER 100
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
           G YTEKDAS++I+QVL AV Y+HE
Sbjct: 101 GVYTEKDASLVIQQVLSAVKYLHE 124

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 26/145 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++L++   
Sbjct: 49  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--- 105
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L E FEDK   YLV E+ TGGELFD I+ + 
Sbjct: 106 ---------------------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 144
Query: 147 SYTEKDASMLIRQVLEAVDYMHEAR 171
            ++E DA+ +IRQVL  + YMH+ +
Sbjct: 145 RFSEVDAARIIRQVLSGITYMHKNK 169

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 26/145 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++L++   
Sbjct: 50  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--- 106
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L E FEDK   YLV E+ TGGELFD I+ + 
Sbjct: 107 ---------------------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 145
Query: 147 SYTEKDASMLIRQVLEAVDYMHEAR 171
            ++E DA+ +IRQVL  + YMH+ +
Sbjct: 146 RFSEVDAARIIRQVLSGITYMHKNK 170

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 26/145 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++L++   
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--- 82
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L E FEDK   YLV E+ TGGELFD I+ + 
Sbjct: 83  ---------------------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 147 SYTEKDASMLIRQVLEAVDYMHEAR 171
            ++E DA+ +IRQVL  + YMH+ +
Sbjct: 122 RFSEVDAARIIRQVLSGITYMHKNK 146

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 26/145 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++L++   
Sbjct: 32  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--- 88
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L E FEDK   YLV E+ TGGELFD I+ + 
Sbjct: 89  ---------------------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 127
Query: 147 SYTEKDASMLIRQVLEAVDYMHEAR 171
            ++E DA+ +IRQVL  + YMH+ +
Sbjct: 128 RFSEVDAARIIRQVLSGITYMHKNK 152

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 26/145 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++L++   
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--- 82
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI +L E FEDK   YLV E+ TGGELFD I+ + 
Sbjct: 83  ---------------------LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 147 SYTEKDASMLIRQVLEAVDYMHEAR 171
            ++E DA+ +IRQVL  + Y H+ +
Sbjct: 122 RFSEVDAARIIRQVLSGITYXHKNK 146

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 25/141 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           + Y +KE LG GAFS VR    +  G  FA KII+ K L  ++   LE E ++ R+    
Sbjct: 29  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK---- 84
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L HPNIV+L ++ +++   YLV +LVTGGELF+ IV +  
Sbjct: 85  --------------------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 148 YTEKDASMLIRQVLEAVDYMH 168
           Y+E DAS  I+Q+LE++ Y H
Sbjct: 125 YSEADASHCIQQILESIAYCH 145

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 25/141 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           + Y +KE LG GAFS VR    +  G  FA KII+ K L  ++   LE E ++ R+    
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK---- 61
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L HPNIV+L ++ +++   YLV +LVTGGELF+ IV +  
Sbjct: 62  --------------------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 148 YTEKDASMLIRQVLEAVDYMH 168
           Y+E DAS  I+Q+LE++ Y H
Sbjct: 102 YSEADASHCIQQILESIAYCH 122

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 25/141 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           + Y +KE LG GAFS VR    +  G  FA KII+ K L  ++   LE E ++ R+    
Sbjct: 5   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK---- 60
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L HPNIV+L ++ +++   YLV +LVTGGELF+ IV +  
Sbjct: 61  --------------------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 100
Query: 148 YTEKDASMLIRQVLEAVDYMH 168
           Y+E DAS  I+Q+LE++ Y H
Sbjct: 101 YSEADASHCIQQILESIAYCH 121

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 25/141 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           + Y +KE LG GAFS VR    +  G  FA KII+ K L  ++   LE E ++ R+    
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK---- 61
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L HPNIV+L ++ +++   YLV +LVTGGELF+ IV +  
Sbjct: 62  --------------------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 148 YTEKDASMLIRQVLEAVDYMH 168
           Y+E DAS  I+Q+LE++ Y H
Sbjct: 102 YSEADASHCIQQILESIAYCH 122

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDY 166
           RL+HPNI++L E FE   ++ LV+ELVTGGELFDRIVEKG Y+E+DA+  ++Q+LEAV Y
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 167 MHE 169
           +HE
Sbjct: 164 LHE 166

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 25/145 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRF 84
           +  E+Y +  +LG G+F EV   + R     +AVK+I+K + K K+ S +  E+++L++ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK- 77
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L HPNI++L E  ED    Y+V EL TGGELFD I++
Sbjct: 78  -----------------------LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK 114
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
           +  ++E DA+ +I+QV   + YMH+
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHK 139

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 25/145 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRF 84
           +  E+Y +  +LG G+F EV   + R     +AVK+I+K + K K+ S +  E+++L++ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK- 77
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L HPNI++L E  ED    Y+V EL TGGELFD I++
Sbjct: 78  -----------------------LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK 114
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
           +  ++E DA+ +I+QV   + YMH+
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHK 139

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 25/145 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRF 84
           +  E+Y +  +LG G+F EV   + R     +AVK+I+K + K K+ S +  E+++L++ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK- 77
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L HPNI++L E  ED    Y+V EL TGGELFD I++
Sbjct: 78  -----------------------LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK 114
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
           +  ++E DA+ +I+QV   + YMH+
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHK 139

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHNRLDE 94
           LG+GA+ EV L + +  G   A+KII K ++    +S  L +E+ VL++           
Sbjct: 29  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ----------- 77
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                        L HPNI++L E FEDK   YLVME+  GGELFD I+ +  ++E DA+
Sbjct: 78  -------------LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA 124
Query: 155 MLIRQVLEAVDYMHE 169
           ++++QVL    Y+H+
Sbjct: 125 VIMKQVLSGTTYLHK 139

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ VR    +  G  +A K I K+ L         + +E E+ +L
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R                         + HPNI+ L + FE+K  V L++ELV+GGELFD 
Sbjct: 63  RE------------------------IRHPNIITLHDIFENKTDVVLILELVSGGELFDF 98
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           + EK S TE +A+  ++Q+L+ V Y+H  R
Sbjct: 99  LAEKESLTEDEATQFLKQILDGVHYLHSKR 128

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHNRLDE 94
           LG+GA+ EV L + +  G   A+KII K ++    +S  L +E+ VL++           
Sbjct: 12  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ----------- 60
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                        L HPNI++L E FEDK   YLVME+  GGELFD I+ +  ++E DA+
Sbjct: 61  -------------LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA 107
Query: 155 MLIRQVLEAVDYMHE 169
           ++++QVL    Y+H+
Sbjct: 108 VIMKQVLSGTTYLHK 122

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ VR    +  G  +A K I K+ L         + +E E+ +L
Sbjct: 10  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R                         + HPNI+ L + FE+K  V L++ELV+GGELFD 
Sbjct: 70  RE------------------------IRHPNIITLHDIFENKTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           + EK S TE +A+  ++Q+L+ V Y+H  R
Sbjct: 106 LAEKESLTEDEATQFLKQILDGVHYLHSKR 135

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 25/144 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
           S+ ++Y L E LG GAFS VR       G  +A KII+ K L  ++   LE E ++ R  
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL- 59
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L HPNIV+L ++  ++   YLV +LVTGGELF+ IV 
Sbjct: 60  -----------------------LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 145 KGSYTEKDASMLIRQVLEAVDYMH 168
           +  Y+E DAS  I+Q+LE+V++ H
Sbjct: 97  REYYSEADASHCIQQILESVNHCH 120

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ VR    +  G  +A K I K+ L         + +E E+ +L
Sbjct: 24  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R                         + HPNI+ L + FE+K  V L++ELV+GGELFD 
Sbjct: 84  RE------------------------IRHPNIITLHDIFENKTDVVLILELVSGGELFDF 119
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           + EK S TE +A+  ++Q+L+ V Y+H  R
Sbjct: 120 LAEKESLTEDEATQFLKQILDGVHYLHSKR 149

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 25/144 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
           S+ ++Y L E LG GAFS VR       G  +A KII+ K L  ++   LE E ++ R  
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL- 59
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L HPNIV+L ++  ++   YLV +LVTGGELF+ IV 
Sbjct: 60  -----------------------LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 145 KGSYTEKDASMLIRQVLEAVDYMH 168
           +  Y+E DAS  I+Q+LE+V++ H
Sbjct: 97  REYYSEADASHCIQQILESVNHCH 120

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 25/143 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y L+  +G G++ EV++A  +      A K I K  ++   D  + EI++++    
Sbjct: 24  INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKS--- 79
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L ETFED   +YLVMEL TGGELF+R+V K 
Sbjct: 80  ---------------------LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR 118
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E DA+ +++ VL AV Y H+
Sbjct: 119 VFRESDAARIMKDVLSAVAYCHK 141

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 25/143 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I + Y L+  +G G++ EV++A  +      A K I K  ++   D  + EI++++    
Sbjct: 7   INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKS--- 62
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L ETFED   +YLVMEL TGGELF+R+V K 
Sbjct: 63  ---------------------LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR 101
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E DA+ +++ VL AV Y H+
Sbjct: 102 VFRESDAARIMKDVLSAVAYCHK 124

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I E Y     LG+GA+ EV L + +   +  A+K+I K        S +N  K + +F +
Sbjct: 34  IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN--KNIEKFHE 91
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
            ++N +             + L HPNI++L + FEDK   YLV E   GGELF++I+ + 
Sbjct: 92  EIYNEISLL----------KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH 141
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E DA+ +++Q+L  + Y+H+
Sbjct: 142 KFDECDAANIMKQILSGICYLHK 164

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 25/144 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFS 85
            +  Y L E LG GAFS VR       G  +A KII+ K L  ++   LE E ++ R   
Sbjct: 20  FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL-- 77
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                 L HPNIV+L ++  ++   YL+ +LVTGGELF+ IV +
Sbjct: 78  ----------------------LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR 115
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
             Y+E DAS  I+Q+LEAV + H+
Sbjct: 116 EYYSEADASHCIQQILEAVLHCHQ 139

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 26/140 (18%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           E+LG G F +V   E    G   A KII  + +K KE+ ++NEI        SV N+LD 
Sbjct: 95  EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE-VKNEI--------SVMNQLD- 144
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDA 153
                          H N++QL + FE K+ + LVME V GGELFDRI+++  + TE D 
Sbjct: 145 ---------------HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 154 SMLIRQVLEAVDYMHEARYL 173
            + ++Q+ E + +MH+   L
Sbjct: 190 ILFMKQICEGIRHMHQMYIL 209

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 25/134 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRFSQSVHNRLDET 95
           LG+GA+ EV L   +      A+KII K ++    +S L  E+ VL+             
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL------------ 92
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                       L HPNI++L + FEDK   YLVME   GGELFD I+ +  + E DA++
Sbjct: 93  ------------LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 156 LIRQVLEAVDYMHE 169
           +I+QVL  V Y+H+
Sbjct: 141 IIKQVLSGVTYLHK 154

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L E LG GAFS VR    +     +A KII+ K L  ++   LE E ++ R       
Sbjct: 33  YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRL------ 86
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L ++  ++   YLV +LVTGGELF+ IV +  Y+
Sbjct: 87  ------------------LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 128
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E DAS  I Q+LE+V+++H+
Sbjct: 129 EADASHCIHQILESVNHIHQ 148

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 74/142 (52%), Gaps = 25/142 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           E+Y L E LG GAFS VR       G  +A  II+ K L  ++   LE E ++ R     
Sbjct: 11  EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL---- 66
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L HPNIV+L ++  ++   YL+ +LVTGGELF+ IV +  
Sbjct: 67  --------------------LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 106
Query: 148 YTEKDASMLIRQVLEAVDYMHE 169
           Y+E DAS  I+Q+LEAV + H+
Sbjct: 107 YSEADASHCIQQILEAVLHCHQ 128

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 28/154 (18%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +I++ +I K  LG+GAF +V L E R +G    +K I+K   +   + +E EI+VL+   
Sbjct: 19  TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS-- 76
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                 L HPNI+++ E FED H +Y+VME   GGEL +RIV  
Sbjct: 77  ----------------------LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSA 114
Query: 146 G----SYTEKDASMLIRQVLEAVDYMHEARYLSK 175
                + +E   + L++Q++ A+ Y H    + K
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 28/138 (20%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           Y++KE +G G++SE +    +     +AVK+IDK     K D  E EI++L R+ Q    
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS----KRDPSE-EIEILLRYGQ---- 79
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                              HPNI+ L + ++D   VYLV EL+ GGEL D+I+ +  ++E
Sbjct: 80  -------------------HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE 120
Query: 151 KDASMLIRQVLEAVDYMH 168
           ++AS ++  + + V+Y+H
Sbjct: 121 REASFVLHTIGKTVEYLH 138

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 28/142 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
             + Y++KE +G G++SE +    +     +AVK+IDK     K D  E EI++L R+ Q
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS----KRDPSE-EIEILLRYGQ 79
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HPNI+ L + ++D   VYLV EL+ GGEL D+I+ + 
Sbjct: 80  -----------------------HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            ++E++AS ++  + + V+Y+H
Sbjct: 117 FFSEREASFVLHTIGKTVEYLH 138

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 25/145 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
           S+ ++Y L E +G GAFS VR       G  +A KII+ K L  ++   LE E ++ R  
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRL- 59
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
                                  L H NIV+L ++  ++   YLV +LVTGGELF+ IV 
Sbjct: 60  -----------------------LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
           +  Y+E DAS  I+Q+LEAV + H+
Sbjct: 97  REYYSEADASHCIQQILEAVLHCHQ 121

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + HPNI+ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHPNIITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L++ +G G F++V+LA     G   AVKIIDK  L       L  E+++++       
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI------ 70
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 71  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 112
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 113 EKEARAKFRQIVSAVQYCHQ 132

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 27/133 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G+FS  R    +++   FAVKII K+     E + + EI  L+              
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCE----------- 63
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        HPNIV+L E F D+   +LVMEL+ GGELF+RI +K  ++E +AS +
Sbjct: 64  ------------GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYI 111
Query: 157 IRQVLEAVDYMHE 169
           +R+++ AV +MH+
Sbjct: 112 MRKLVSAVSHMHD 124

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AVKIIDK  L       L  E+++++       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AVKIIDK  L       L  E+++++       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AVKIIDK  L       L  E+++++       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AVKIIDK  L       L  E+++++       
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV------ 62
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 63  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMK 104
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 105 EKEARAKFRQIVSAVQYCHQ 124

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 8   NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 67  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 67  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 67  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 65
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 66  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 101
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 102 DFLAEKESLTEEEATEFLKQILNGVYYLH 130

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 8   NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 67  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 67  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG------KEDSLENEIK 79
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K       +ED +E E+ 
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED-IEREVS 65
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           +L+                         + HPN++ L E +E+K  V L++ELV GGELF
Sbjct: 66  ILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELF 101
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           D + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 102 DFLAEKESLTEEEATEFLKQILNGVYYLH 130

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 25/146 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   A+KIIDK  L       L  E+++++       
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI------ 70
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YL+ME  +GGE+FD +V  G   
Sbjct: 71  ------------------LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK 112
Query: 150 EKDASMLIRQVLEAVDYMHEARYLSK 175
           EK+A    RQ++ AV Y H+ R + +
Sbjct: 113 EKEARSKFRQIVSAVQYCHQKRIVHR 138

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AV+IIDK  L       L  E+++++       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 25/146 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   A+KIIDK  L       L  E+++++       
Sbjct: 14  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI------ 67
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YL+ME  +GGE+FD +V  G   
Sbjct: 68  ------------------LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK 109
Query: 150 EKDASMLIRQVLEAVDYMHEARYLSK 175
           EK+A    RQ++ AV Y H+ R + +
Sbjct: 110 EKEARSKFRQIVSAVQYCHQKRIVHR 135

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AV+IIDK  L       L  E+++++       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLVME  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 29/148 (19%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L+ ELV GGELFD
Sbjct: 68  LKE------------------------IQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + EK S TE++A+  ++Q+L  V Y+H
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLH 131

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSV 88
           Y+L + LG G F +V++ E +  G   AVKI++++ ++  +    ++ EI+ L+ F    
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR--- 69
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HP+I++L +        ++VME V+GGELFD I + G  
Sbjct: 70  ---------------------HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV 108
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E +A  L +Q+L AVDY H
Sbjct: 109 EEMEARRLFQQILSAVDYCH 128

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSV 88
           Y+L + LG G F +V++ E +  G   AVKI++++ ++  +    ++ EI+ L+ F    
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR--- 69
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HP+I++L +        ++VME V+GGELFD I + G  
Sbjct: 70  ---------------------HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV 108
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E +A  L +Q+L AVDY H
Sbjct: 109 EEMEARRLFQQILSAVDYCH 128

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 24/147 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
            E+ Y L E++G GAFS VR   +RE G  FAVKI+D                 + +F+ 
Sbjct: 22  FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVD-----------------VAKFTS 64
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
           S       T D          L HP+IV+L+ET+     +Y+V E + G +L   IV++ 
Sbjct: 65  SPGL---STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA 121
Query: 147 S----YTEKDASMLIRQVLEAVDYMHE 169
                Y+E  AS  +RQ+LEA+ Y H+
Sbjct: 122 DAGFVYSEAVASHYMRQILEALRYCHD 148

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 25/140 (17%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSVH 89
           Y L + +G G F++V+LA     G   AVKIIDK  L       L  E+++ +       
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV------ 69
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNIV+L E  E +  +YLV E  +GGE+FD +V  G   
Sbjct: 70  ------------------LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK 111
Query: 150 EKDASMLIRQVLEAVDYMHE 169
           EK+A    RQ++ AV Y H+
Sbjct: 112 EKEARAKFRQIVSAVQYCHQ 131

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE--DSLENEIKVLRRFSQSV 88
           YIL + LG G F +V++ +    G   AVKI++++ ++  +    +  EI+ L+ F    
Sbjct: 18  YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR--- 74
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HP+I++L +       +++VME V+GGELFD I + G  
Sbjct: 75  ---------------------HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRL 113
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            EK++  L +Q+L  VDY H
Sbjct: 114 DEKESRRLFQQILSGVDYCH 133

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + H N++ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + H N++ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + H N++ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + H N++ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 29/147 (19%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKVL 81
           +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           R+                        + H N++ L + +E++  V L++ELV+GGELFD 
Sbjct: 70  RQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGGELFDF 105
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           + +K S +E++A+  I+Q+L+ V+Y+H
Sbjct: 106 LAQKESLSEEEATSFIKQILDGVNYLH 132

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K                 R+F+
Sbjct: 7   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK-----------------RKFA 49
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 50  IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 108
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHE 132

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 28/140 (20%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           + Y +KE +G G++S  +    +     FAVKIIDK     K D  E EI++L R+ Q  
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS----KRDPTE-EIEILLRYGQ-- 74
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HPNI+ L + ++D   VY+V EL+ GGEL D+I+ +  +
Sbjct: 75  ---------------------HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFF 113
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E++AS ++  + + V+Y+H
Sbjct: 114 SEREASAVLFTITKTVEYLH 133

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K                 R+F+
Sbjct: 13  ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK-----------------RKFA 55
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 56  IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 114
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 115 KRLKEATCKLYFYQMLLAVQYLHE 138

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K                 R+F+
Sbjct: 7   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK-----------------RKFA 49
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 50  IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 108
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHE 132

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K                 R+F+
Sbjct: 6   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK-----------------RKFA 48
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 49  IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 107
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 108 KRLKEATCKLYFYQMLLAVQYLHE 131

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K                 R+F+
Sbjct: 7   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK-----------------RKFA 49
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 50  IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 108
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHE 132

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 28/140 (20%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           + Y +KE +G G++S  +    +     FAVKIIDK     K D  E EI++L R+ Q  
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS----KRDPTE-EIEILLRYGQ-- 74
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HPNI+ L + ++D   VY+V EL  GGEL D+I+ +  +
Sbjct: 75  ---------------------HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFF 113
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E++AS ++  + + V+Y+H
Sbjct: 114 SEREASAVLFTITKTVEYLH 133

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
            E+ Y L E++G G FS VR   +RE G  FAVKI+D                 + +F+ 
Sbjct: 24  FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD-----------------VAKFTS 66
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
           S       T D          L HP+IV+L+ET+     +Y+V E + G +L   IV++ 
Sbjct: 67  SPGL---STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA 123
Query: 147 S----YTEKDASMLIRQVLEAVDYMHE 169
                Y+E  AS  +RQ+LEA+ Y H+
Sbjct: 124 DAGFVYSEAVASHYMRQILEALRYCHD 150

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
            E+ Y L E++G G FS VR   +RE G  FAVKI+D                 + +F+ 
Sbjct: 22  FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD-----------------VAKFTS 64
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
           S       T D          L HP+IV+L+ET+     +Y+V E + G +L   IV++ 
Sbjct: 65  SPGL---STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA 121
Query: 147 S----YTEKDASMLIRQVLEAVDYMHE 169
                Y+E  AS  +RQ+LEA+ Y H+
Sbjct: 122 DAGFVYSEAVASHYMRQILEALRYCHD 148

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           +KY  K+++G G  S VR    R  G  FAVKI++  A +   + LE   +  RR +  +
Sbjct: 94  QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                           ++   HP+I+ LI+++E    ++LV +L+  GELFD + EK + 
Sbjct: 154 ----------------RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL 197
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +EK+   ++R +LEAV ++H
Sbjct: 198 SEKETRSIMRSLLEAVSFLH 217

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A++II K                 R+F+
Sbjct: 146 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISK-----------------RKFA 188
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 189 IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 247
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 248 KRLKEATCKLYFYQMLLAVQYLHE 271

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           ++ ++YI+ + LG+GA  EV+LA  R+     A++II K                 R+F+
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISK-----------------RKFA 174
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                  D   +  +  +  ++L HP I++ I+ F D    Y+V+EL+ GGELFD++V  
Sbjct: 175 IGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGN 233
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
               E    +   Q+L AV Y+HE
Sbjct: 234 KRLKEATCKLYFYQMLLAVQYLHE 257

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 24/137 (17%)
Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           +  ELLG GA+++V+ A S +NG  +AVKII+K+A   +        +V R         
Sbjct: 16  LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS-------RVFREV------- 61
Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
             ET      +K        NI++LIE FED  + YLV E + GG +   I ++  + E+
Sbjct: 62  --ETLYQCQGNK--------NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNER 111
Query: 152 DASMLIRQVLEAVDYMH 168
           +AS ++R V  A+D++H
Sbjct: 112 EASRVVRDVAAALDFLH 128

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 26/145 (17%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           S+ + Y + E LG+GAF  V     +  G +F  K I+      K  +++NEI ++ +  
Sbjct: 48  SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY-TVKNEISIMNQ-- 104
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VE 144
                                 L HP ++ L + FEDK+++ L++E ++GGELFDRI  E
Sbjct: 105 ----------------------LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE 142
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHE 169
               +E +    +RQ  E + +MHE
Sbjct: 143 DYKMSEAEVINYMRQACEGLKHMHE 167

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 33/148 (22%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           S+++  IL+ L GTG+F  V L  SR NG  +A+K++ K+              ++ R  
Sbjct: 4   SLQDFQILRTL-GTGSFGRVHLIRSRHNGRYYAMKVLKKE--------------IVVRLK 48
Query: 86  QSVHNRLDETNDNNSNDKDKERL-----THPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           Q  H     TND        ERL     THP I+++  TF+D  +++++M+ + GGELF 
Sbjct: 49  QVEH-----TND--------ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS 95
Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
            + +   +    A     +V  A++Y+H
Sbjct: 96  LLRKSQRFPNPVAKFYAAEVCLALEYLH 123

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  FA+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  FA+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  FA+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSV 88
           Y + + LG G+F +V+LA     G   A+KII+KK L     +  +E EI  LR      
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL----- 69
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HP+I++L +  + K ++ +V+E   G ELFD IV++   
Sbjct: 70  -------------------LRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKM 109
Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSK 175
           +E++A    +Q++ AV+Y H  + + +
Sbjct: 110 SEQEARRFFQQIISAVEYCHRHKIVHR 136

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSV 88
           Y + + LG G+F +V+LA     G   A+KII+KK L     +  +E EI  LR      
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL----- 70
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HP+I++L +  + K ++ +V+E   G ELFD IV++   
Sbjct: 71  -------------------LRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKM 110
Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSK 175
           +E++A    +Q++ AV+Y H  + + +
Sbjct: 111 SEQEARRFFQQIISAVEYCHRHKIVHR 137

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSV 88
           Y + + LG G+F +V+LA     G   A+KII+KK L     +  +E EI  LR      
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL----- 60
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HP+I++L +  + K ++ +V+E   G ELFD IV++   
Sbjct: 61  -------------------LRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKM 100
Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSK 175
           +E++A    +Q++ AV+Y H  + + +
Sbjct: 101 SEQEARRFFQQIISAVEYCHRHKIVHR 127

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSV 88
           Y + + LG G+F +V+LA     G   A+KII+KK L     +  +E EI  LR      
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL----- 64
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HP+I++L +  + K ++ +V+E   G ELFD IV++   
Sbjct: 65  -------------------LRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKM 104
Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSK 175
           +E++A    +Q++ AV+Y H  + + +
Sbjct: 105 SEQEARRFFQQIISAVEYCHRHKIVHR 131

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 29/144 (20%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQ 86
           E + +  LLG G+F+ V  AES   G   A+K+IDKKA+   G    ++NE+K+      
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI------ 64
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK- 145
                               +L HP+I++L   FED + VYLV+E+   GE+ +R ++  
Sbjct: 65  ------------------HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNR 105
Query: 146 -GSYTEKDASMLIRQVLEAVDYMH 168
              ++E +A   + Q++  + Y+H
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLH 129

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  ++N  + A+K++ K  L+  G E  L  EI++              
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-------------- 68
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI+++   F D+ ++YL++E    GEL+  + + G + E+ ++
Sbjct: 69  ----------QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             + ++ +A+ Y HE + + +
Sbjct: 119 TFMEELADALHYCHERKVIHR 139

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  ++N  + A+K++ K  L+  G E  L  EI++              
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-------------- 67
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI+++   F D+ ++YL++E    GEL+  + + G + E+ ++
Sbjct: 68  ----------QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             + ++ +A+ Y HE + + +
Sbjct: 118 TFMEELADALHYCHERKVIHR 138

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 36  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 82
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 83  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 130
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 131 RFYAAQIVLTFEYLH 145

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 70  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 116
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 117 ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 164
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 165 RFYAAQIVLTFEYLH 179

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           + Y + E LGTGAF  V     R  G  FA K +       KE ++  EI+ +     SV
Sbjct: 51  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTM-----SV 104
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGS 147
                              L HP +V L + FED +++ ++ E ++GGELF+++  E   
Sbjct: 105 -------------------LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 145
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
            +E +A   +RQV + + +MHE  Y+
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYV 171

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 88
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 89  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 136
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 137 RFYAAQIVLTFEYLH 151

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 70  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 116
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 117 ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 164
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 165 RFYAAQIVLTFEYLH 179

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 44  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 90
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 91  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA 138
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 139 RFYAAQIVLTFEYLH 153

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           + Y + E LGTGAF  V     R  G  FA K +       KE ++  EI+ +     SV
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTM-----SV 210
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGS 147
                              L HP +V L + FED +++ ++ E ++GGELF+++  E   
Sbjct: 211 -------------------LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 251
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
            +E +A   +RQV + + +MHE  Y+
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYV 277

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E+G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 70  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 116
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 117 ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA 164
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 165 RFYAAQIVLTFEYLH 179

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E Y  KE+LG G  S VR    +     +AVKIID   + G       E++ LR  +   
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREAT--- 70
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
              L E       D  ++   HPNI+QL +T+E     +LV +L+  GELFD + EK + 
Sbjct: 71  ---LKEV------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           +EK+   ++R +LE +  +H+
Sbjct: 122 SEKETRKIMRALLEVICALHK 142

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 88
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 89  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA 136
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 137 RFYAAQIVLTFEYLH 151

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E Y  KE+LG G  S VR    +     +AVKIID   + G       E++ LR  +   
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREAT--- 70
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
              L E       D  ++   HPNI+QL +T+E     +LV +L+  GELFD + EK + 
Sbjct: 71  ---LKEV------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           +EK+   ++R +LE +  +H+
Sbjct: 122 SEKETRKIMRALLEVICALHK 142

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E Y  KE+LG G  S VR    +     +AVKIID   + G       E++ LR  +   
Sbjct: 4   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREAT--- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
              L E       D  ++   HPNI+QL +T+E     +LV +L+  GELFD + EK + 
Sbjct: 58  ---LKEV------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           +EK+   ++R +LE +  +H+
Sbjct: 109 SEKETRKIMRALLEVICALHK 129

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 35  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 81
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 82  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 129
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 130 RFYAAQIVLTFEYLH 144

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 27/147 (18%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSL--ENEIKVLRRFSQSV 88
           YI++E LG G+F +V+LA   +     A+K I ++ LK  +  +  E EI  L+      
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL----- 65
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HP+I++L +       + +V+E   GGELFD IVEK   
Sbjct: 66  -------------------LRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRM 105
Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSK 175
           TE +     +Q++ A++Y H  + + +
Sbjct: 106 TEDEGRRFFQQIICAIEYCHRHKIVHR 132

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 97  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           +GTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L + +E G  +A+KI+DK+    LK  E +L NE    +R  Q+V+    
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NE----KRIQQAVN---- 100
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                            P +V+L  +F+D   +Y+V+E   GGE+F  +   G ++E  A
Sbjct: 101 ----------------FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKE-DSLENEIKVLRRFSQSVHNRLDE 94
           LGTG+F  V L +  E G  +A+KI+DK K +K KE +   NE ++L             
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL------------- 95
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                      + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G ++E  A 
Sbjct: 96  -----------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 155 MLIRQVLEAVDYMH 168
               Q++   +Y+H
Sbjct: 145 FYAAQIVLTFEYLH 158

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKE-DSLENEIKVLRRFSQSVHNRLDE 94
           LGTG+F  V L +  E G  +A+KI+DK K +K KE +   NE ++L             
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL------------- 95
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                      + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G ++E  A 
Sbjct: 96  -----------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 155 MLIRQVLEAVDYMH 168
               Q++   +Y+H
Sbjct: 145 FYAAQIVLTFEYLH 158

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 27/150 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           EKY+  + +G G+F +  L +S E+G  + +K I+   +  KE +    E+ VL      
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL------ 77
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKG 146
                               + HPNIVQ  E+FE+   +Y+VM+   GG+LF RI  +KG
Sbjct: 78  ------------------ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG 119
Query: 147 SYTEKDASM-LIRQVLEAVDYMHEARYLSK 175
              ++D  +    Q+  A+ ++H+ + L +
Sbjct: 120 VLFQEDQILDWFVQICLALKHVHDRKILHR 149

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME   GGE+F  +   G + E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 56
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 57  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 101 PEPDAQRFFHQLMAGVVYLH 120

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P + +L  +F+D   +Y+VME   GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P + +L  +F+D   +Y+VME   GGE+F  +   G ++E  A
Sbjct: 97  ------------QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 58
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 59  ----------------NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           +GTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME + GG++F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           +GTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 95
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P +V+L  +F+D   +Y+VME + GG++F  +   G ++E  A
Sbjct: 96  ------------QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA 143
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 144 RFYAAQIVLTFEYLH 158

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y L + +G+G F   RL   +++  + AVK I++   +  +++++ EI         +
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDENVKREI---------I 67
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           ++R                L HPNIV+  E       + +VME  +GGELF+RI   G +
Sbjct: 68  NHR---------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF 112
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q++  V Y H
Sbjct: 113 SEDEARFFFQQLISGVSYCH 132

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y L + +G+G F   RL   +++  + AVK I++   +  +++++ EI         +
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDENVKREI---------I 67
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           ++R                L HPNIV+  E       + +VME  +GGELF+RI   G +
Sbjct: 68  NHR---------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF 112
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q++  V Y H
Sbjct: 113 SEDEARFFFQQLISGVSYCH 132

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y L + +G+G F   RL   +++  + AVK I++   +  +++++ EI         +
Sbjct: 18  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDENVKREI---------I 66
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           ++R                L HPNIV+  E       + +VME  +GGELF+RI   G +
Sbjct: 67  NHR---------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF 111
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q++  V Y H
Sbjct: 112 SEDEARFFFQQLISGVSYCH 131

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKA---LKGKEDSLENEIKVLRRFSQSVHNRLD 93
           LGTG+F  V L +  E G  +A+KI+DK+    LK  E +L NE ++L            
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIL------------ 96
Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                       + +  P + +L  +F+D   +Y+VME   GGE+F  +   G + E  A
Sbjct: 97  ------------QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA 144
Query: 154 SMLIRQVLEAVDYMH 168
                Q++   +Y+H
Sbjct: 145 RFYAAQIVLTFEYLH 159

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y L + +G+G F   RL   +++  + AVK I++              K+     + +
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE------------KIAANVKREI 66
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N                 L HPNIV+  E       + +VME  +GGELF+RI   G +
Sbjct: 67  INH--------------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF 112
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q++  V Y H
Sbjct: 113 SEDEARFFFQQLISGVSYCH 132

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA  EV+LA +R      AVKI+D K      ++++ EI +        
Sbjct: 6   EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI-------- 57
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            N++               L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 58  -NKM---------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH 121

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y   + +G+G F   RL   +    + AVK I++ A    +++++ EI         +
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREI---------I 68
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           ++R                L HPNIV+  E       + ++ME  +GGEL++RI   G +
Sbjct: 69  NHR---------------SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF 113
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q+L  V Y H
Sbjct: 114 SEDEARFFFQQLLSGVSYCH 133

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y L + +G G F   RL   ++   + AVK I++   +  +++++ EI         +
Sbjct: 19  DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG--EKIDENVKREI---------I 67
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           ++R                L HPNIV+  E       + +VME  +GGELF+RI   G +
Sbjct: 68  NHR---------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF 112
Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q++  V Y H
Sbjct: 113 SEDEARFFFQQLISGVSYAH 132

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 10  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 63
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 64  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 107
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 108 DETCTRFYTAEIVSALEYLH 127

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 9   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 62
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 63  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 106
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 107 DETCTRFYTAEIVSALEYLH 126

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 29  EKYILKELLGTGAFS---EVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           E + L  +LG G +    +VR       G +FA+K++ KKA+            ++R   
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVL-KKAM------------IVRNAK 63
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
            + H + +            E + HP IV LI  F+   K+YL++E ++GGELF ++  +
Sbjct: 64  DTAHTKAERN--------ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
           G + E  A   + ++  A+ ++H+
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQ 139

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 7   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 60
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 61  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 104
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 105 DETCTRFYTAEIVSALEYLH 124

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 29  EKYILKELLGTGAFS---EVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           E + L  +LG G +    +VR       G +FA+K++ KKA+            ++R   
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVL-KKAM------------IVRNAK 63
Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
            + H + +            E + HP IV LI  F+   K+YL++E ++GGELF ++  +
Sbjct: 64  DTAHTKAERN--------ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
           G + E  A   + ++  A+ ++H+
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQ 139

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 61
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 62  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 105
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 106 DETCTRFYTAEIVSALEYLH 125

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 86
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 87  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 131 DETCTRFYTAEIVSALEYLH 150

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 86
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 87  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 131 DETCTRFYTAEIVSALEYLH 150

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 82
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 83  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 126
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 127 DETCTRFYTAEIVSALEYLH 146

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 83
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 84  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 128 DETCTRFYTAEIVSALEYLH 147

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 83
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 84  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 128 DETCTRFYTAEIVSALEYLH 147

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 83
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 84  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 128 DETCTRFYTAEIVSALEYLH 147

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 67
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 68  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 111
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 112 DETCTRFYTAEIVSALEYLH 131

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 82
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 83  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 126
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 127 DETCTRFYTAEIVSALEYLH 146

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 88
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 89  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 132
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 133 DETCTRFYTAEIVSALEYLH 152

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +++KY LK  +G G++  VR+A   +   + A+KI++K  ++         IK   R  +
Sbjct: 24  LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
            +H                    HPNI +L E +ED+  + LVMEL  GG L D++
Sbjct: 84  KLH--------------------HPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 66
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    GE++  + +   + E+  +
Sbjct: 67  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 117 TYITELANALSYCHSKRVIHR 137

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 66
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    GE++  + +   + E+  +
Sbjct: 67  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 117 TYITELANALSYCHSKRVIHR 137

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF +V  A+++E   + A K+ID K+ +  ED +  EI +L               
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA-------------- 89
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASM 155
                        HPNIV+L++ F  ++ +++++E   GG +   ++E +   TE    +
Sbjct: 90  ----------SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 156 LIRQVLEAVDYMHEARYLSK 175
           + +Q L+A++Y+H+ + + +
Sbjct: 140 VCKQTLDALNYLHDNKIIHR 159

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF +V  A+++E   + A K+ID K+ +  ED +  EI +L               
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA-------------- 89
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASM 155
                        HPNIV+L++ F  ++ +++++E   GG +   ++E +   TE    +
Sbjct: 90  ----------SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 156 LIRQVLEAVDYMHEARYLSK 175
           + +Q L+A++Y+H+ + + +
Sbjct: 140 VCKQTLDALNYLHDNKIIHR 159

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF +V  A+++E   + A K+ID K+ +  ED +  EI +L               
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA-------------- 89
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASM 155
                        HPNIV+L++ F  ++ +++++E   GG +   ++E +   TE    +
Sbjct: 90  ----------SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 156 LIRQVLEAVDYMHEARYLSK 175
           + +Q L+A++Y+H+ + + +
Sbjct: 140 VCKQTLDALNYLHDNKIIHR 159

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  ++  G E  L  EI++              
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI-------------- 76
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D+ ++YL++E    GEL+  + +  ++ E+  +
Sbjct: 77  ----------QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA 126
Query: 155 MLIRQVLEAVDYMH 168
            ++ ++ +A+ Y H
Sbjct: 127 TIMEELADALMYCH 140

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 32/147 (21%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           Y L+E++G+GA + V+ A         A+K I+ +  +   D L  EI+ +         
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAM--------- 67
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD---RIVEKGS 147
                           +  HPNIV    +F  K +++LVM+L++GG + D    IV KG 
Sbjct: 68  ---------------SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE 112
Query: 148 YT-----EKDASMLIRQVLEAVDYMHE 169
           +      E   + ++R+VLE ++Y+H+
Sbjct: 113 HKSGVLDESTIATILREVLEGLEYLHK 139

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           G  I E+Y + + LG G  S V LAE     T+  +K+  K       +  E     L+R
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAED----TILNIKVAIKAIFIPPREKEET----LKR 57
Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
           F + VHN                +L+H NIV +I+  E+    YLVME + G  L + I 
Sbjct: 58  FEREVHN--------------SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103
Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             G  +   A     Q+L+ + + H+ R + +
Sbjct: 104 SHGPLSVDTAINFTNQILDGIKHAHDMRIVHR 135

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 32/147 (21%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           Y L+E++G+GA + V+ A         A+K I+ +  +   D L  EI+ +         
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAM--------- 62
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD---RIVEKGS 147
                           +  HPNIV    +F  K +++LVM+L++GG + D    IV KG 
Sbjct: 63  ---------------SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE 107
Query: 148 YT-----EKDASMLIRQVLEAVDYMHE 169
           +      E   + ++R+VLE ++Y+H+
Sbjct: 108 HKSGVLDESTIATILREVLEGLEYLHK 134

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V LA  +E G ++AVK++ K  +  ++D +E  +   R  S + +      
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARN------ 82
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                         HP + QL   F+   +++ VME V GG+L   I +   + E  A  
Sbjct: 83  --------------HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF 128
Query: 156 LIRQVLEAVDYMHE 169
              +++ A+ ++H+
Sbjct: 129 YAAEIISALMFLHD 142

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 90
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L   F+D  K+Y  +     GEL   I + GS+
Sbjct: 91  MSRLD----------------HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSF 134
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 135 DETCTRFYTAEIVSALEYLH 154

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS   LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 30  EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 83
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 84  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 128 DETCTRFYTAEIVSALEYLH 147

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  R++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI-------------- 65
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 66  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 116 TYITELANALSYCHSKRVIHR 136

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  R++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI-------------- 65
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 66  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 116 TYITELANALSYCHSKRVIHR 136

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRL 92
           +++G G+F +V LA  +     +AVK++ KKA+  K +E  + +E  VL +         
Sbjct: 44  KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK--------- 94
Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                          + HP +V L  +F+   K+Y V++ + GGELF  +  +  + E  
Sbjct: 95  --------------NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR 140
Query: 153 ASMLIRQVLEAVDYMH 168
           A     ++  A+ Y+H
Sbjct: 141 ARFYAAEIASALGYLH 156

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E +   ++LG G+FS V LA        +A+KI++K+ +       EN++  + R  + V
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTR-ERDV 85
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
            +RLD                HP  V+L  TF+D  K+Y  +     G L   I + GS+
Sbjct: 86  MSRLD----------------HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF 129
Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E        +++ A++Y+H
Sbjct: 130 DETCTRFYTAEIVSALEYLH 149

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 31/159 (19%)
Query: 24  GPSIEEKYILKEL-----LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLEN 76
           GP    ++ L++      LG G F  V LA  +++  + A+K++ K  L+  G E  L  
Sbjct: 1   GPLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG 136
           E+++                        +  L HPNI++L   F D  +VYL++E    G
Sbjct: 61  EVEI------------------------QSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
            ++  + +   + E+  +  I ++  A+ Y H  R + +
Sbjct: 97  TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 66
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 67  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 117 TYITELANALSYCHSKRVIHR 137

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 64
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 65  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 115 TYITELANALSYCHSKRVIHR 135

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 63
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 64  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 114 TYITELANALSYCHSKRVIHR 134

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 87
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 88  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 138 TYITELANALSYCHSKRVIHR 158

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 74/147 (50%), Gaps = 29/147 (19%)
Query: 29  EKYILKELLGTGAFSEVRLA---ESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLR 82
           E + L ++LGTGA+ +V L       + G ++A+K++ K  +  K  + E+   E +VL 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
              QS                       P +V L   F+ + K++L+++ + GGELF  +
Sbjct: 114 HIRQS-----------------------PFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
            ++  +TE +  + + +++ A++++H+
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHK 177

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 62
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 63  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 113 TYITELANALSYCHSKRVIHR 133

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 66
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 67  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 117 TYITELANALSYCHSKRVIHR 137

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 62
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 63  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 113 TYITELANALSYCHSKRVIHR 133

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 62
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 63  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 113 TYITELANALSYCHSKRVIHR 133

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 64
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 65  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 115 TYITELANALSYCHSKRVIHR 135

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 65
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 66  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 116 TYITELANALSYCHSKRVIHR 136

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 63
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 64  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 114 TYITELANALSYCHSKRVIHR 134

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 87
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 88  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 138 TYITELANALSYCHSKRVIHR 158

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 78
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 79  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 129 TYITELANALSYCHSKRVIHR 149

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 112 TYITELANALSYCHSKRVIHR 132

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 64
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 65  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 115 TYITELANALSYCHSKRVIHR 135

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 64
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 65  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 115 TYITELANALSYCHSKRVIHR 135

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 60
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 61  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 111 TYITELANALSYCHSKRVIHR 131

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 64
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 65  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 115 TYITELANALSYCHSKRVIHR 135

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++              
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 66
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 67  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 117 TYITELANALSYCHSKRVIHR 137

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF +V  A+++E G + A K+I+ K+ +  ED +  EI++L             T 
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI-VEIEIL------------ATC 73
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASM 155
           D            HP IV+L+  +    K+++++E   GG +   ++E     TE    +
Sbjct: 74  D------------HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 156 LIRQVLEAVDYMHEARYLSK 175
           + RQ+LEA++++H  R + +
Sbjct: 122 VCRQMLEALNFLHSKRIIHR 141

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG GAF +V  A+++E G + A K+I+ K+ +  ED +  EI++L             T 
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI-VEIEIL------------ATC 65
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASM 155
           D            HP IV+L+  +    K+++++E   GG +   ++E     TE    +
Sbjct: 66  D------------HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 156 LIRQVLEAVDYMHEARYLSK 175
           + RQ+LEA++++H  R + +
Sbjct: 114 VCRQMLEALNFLHSKRIIHR 133

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  ++   + A+K++ K  L+  G E  L  E+++              
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 58
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 59  ----------QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  R + +
Sbjct: 109 TYITELANALSYCHSKRVIHR 129

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE
Sbjct: 14  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DE 51
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 52  VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 111
Query: 155 MLIRQVLEAVDYMH 168
               +++ A+DY+H
Sbjct: 112 FYGAEIVSALDYLH 125

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DE 191
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 192 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 251
Query: 155 MLIRQVLEAVDYMH 168
               +++ A+DY+H
Sbjct: 252 FYGAEIVSALDYLH 265

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE
Sbjct: 15  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DE 52
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 53  VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 112
Query: 155 MLIRQVLEAVDYMH 168
               +++ A+DY+H
Sbjct: 113 FYGAEIVSALDYLH 126

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE
Sbjct: 16  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DE 53
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A 
Sbjct: 54  VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 155 MLIRQVLEAVDYMH 168
               +++ A+DY+H
Sbjct: 114 FYGAEIVSALDYLH 127

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           LLG G F +V L + +  G  +A+KI+ K+ +  K                      DE 
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------------------DEV 195
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
               + ++  +   HP +  L  +F+   ++  VME   GGELF  +  +  ++E  A  
Sbjct: 196 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 255
Query: 156 LIRQVLEAVDYMH 168
              +++ A+DY+H
Sbjct: 256 YGAEIVSALDYLH 268

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 73/139 (52%), Gaps = 26/139 (18%)
Query: 33  LKELLGTGAFSEVRLAES---RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           L ++LG G+F +V L       ++G ++A+K++ K  LK ++       +V  +  + + 
Sbjct: 32  LLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRD-------RVRTKMERDI- 83
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
             L + N             HP +V+L   F+ + K+YL+++ + GG+LF R+ ++  +T
Sbjct: 84  --LADVN-------------HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 128
Query: 150 EKDASMLIRQVLEAVDYMH 168
           E+D    + ++   +D++H
Sbjct: 129 EEDVKFYLAELALGLDHLH 147

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 165 DYMH 168
            Y+H
Sbjct: 175 QYLH 178

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 165 DYMH 168
            Y+H
Sbjct: 131 QYLH 134

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 165 DYMH 168
            Y+H
Sbjct: 181 QYLH 184

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 85  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 165 DYMH 168
            Y+H
Sbjct: 145 QYLH 148

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 26/142 (18%)
Query: 30  KYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           ++ L ++LG G+F +V L +     +   ++A+K++ K  LK ++       +V  +  +
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-------RVRTKMER 77
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
            +   L E N             HP IV+L   F+ + K+YL+++ + GG+LF R+ ++ 
Sbjct: 78  DI---LVEVN-------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV 121
Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            +TE+D    + ++  A+D++H
Sbjct: 122 MFTEEDVKFYLAELALALDHLH 143

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 165 DYMH 168
            Y+H
Sbjct: 131 QYLH 134

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 14  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 51
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 52  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 111
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 112 FYGAEIVSALEYLH 125

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 48
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 49  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 108
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 109 FYGAEIVSALEYLH 122

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 77  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 165 DYMH 168
            Y+H
Sbjct: 137 QYLH 140

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 48
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 49  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 108
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 109 FYGAEIVSALEYLH 122

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 165 DYMH 168
            Y+H
Sbjct: 129 QYLH 132

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 75  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 165 DYMH 168
            Y+H
Sbjct: 135 QYLH 138

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 165 DYMH 168
            Y+H
Sbjct: 129 QYLH 132

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 70  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 165 DYMH 168
            Y+H
Sbjct: 130 QYLH 133

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 26/142 (18%)
Query: 30  KYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           ++ L ++LG G+F +V L +     +   ++A+K++ K  LK ++       +V  +  +
Sbjct: 26  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-------RVRTKMER 78
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
            +   L E N             HP IV+L   F+ + K+YL+++ + GG+LF R+ ++ 
Sbjct: 79  DI---LVEVN-------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV 122
Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            +TE+D    + ++  A+D++H
Sbjct: 123 MFTEEDVKFYLAELALALDHLH 144

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 48
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 49  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 108
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 109 FYGAEIVSALEYLH 122

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 76  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 165 DYMH 168
            Y+H
Sbjct: 136 QYLH 139

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 165 DYMH 168
            Y+H
Sbjct: 131 QYLH 134

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 25  PSIE-----EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK 79
           PS++     E +IL ++LG G+F +V LAE ++    FA+K + KK +   +D +E  + 
Sbjct: 8   PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMV 66
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
             R  S +                      HP +  +  TF+ K  ++ VME + GG+L 
Sbjct: 67  EKRVLSLA--------------------WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM 106
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
             I     +    A+    +++  + ++H
Sbjct: 107 YHIQSCHKFDLSRATFYAAEIILGLQFLH 135

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 28/137 (20%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE--NEIKVLRRFSQSVHNRLDE 94
           LG G F+ VR   S+  G  +A K + KK  +G++   E  +EI VL   ++S       
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFL-KKRRRGQDCRAEILHEIAVLE-LAKSC------ 88
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKD 152
                           P ++ L E +E+  ++ L++E   GGE+F   + + +   +E D
Sbjct: 89  ----------------PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND 132
Query: 153 ASMLIRQVLEAVDYMHE 169
              LI+Q+LE V Y+H+
Sbjct: 133 VIRLIKQILEGVYYLHQ 149

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 26/142 (18%)
Query: 30  KYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           ++ L ++LG G+F +V L +     +   ++A+K++ K  LK ++       +V  +  +
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-------RVRTKMER 77
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
            +   L E N             HP IV+L   F+ + K+YL+++ + GG+LF R+ ++ 
Sbjct: 78  DI---LVEVN-------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV 121
Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            +TE+D    + ++  A+D++H
Sbjct: 122 MFTEEDVKFYLAELALALDHLH 143

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 48
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 49  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 108
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 109 FYGAEIVSALEYLH 122

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 48
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 49  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 108
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 109 FYGAEIVSALEYLH 122

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE 94
           +LLG G F +V L   +  G  +A+KI+ K+ +  K                      DE
Sbjct: 16  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------------------DE 53
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                +  +  +   HP +  L   F+   ++  VME   GGELF  +  +  +TE+ A 
Sbjct: 54  VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 155 MLIRQVLEAVDYMH 168
               +++ A++Y+H
Sbjct: 114 FYGAEIVSALEYLH 127

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDE 94
           LG G F  V LA  + +  + A+K++ K  L+  G E  L  E+++              
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI-------------- 61
Query: 95  TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDAS 154
                     +  L HPNI++L   F D  +VYL++E    G ++  + +   + E+  +
Sbjct: 62  ----------QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 155 MLIRQVLEAVDYMHEARYLSK 175
             I ++  A+ Y H  + + +
Sbjct: 112 TYITELANALSYCHSKKVIHR 132

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE---DSLENEIKVLR 82
           + E +Y L  LLG G F  V       +    A+K+I +  + G     DS+   ++V  
Sbjct: 28  AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVME-LVTGGELFDR 141
            +                         HP +++L++ FE +    LV+E  +   +LFD 
Sbjct: 88  LWKVGAGG------------------GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDY 129
Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           I EKG   E  +     QV+ A+ + H
Sbjct: 130 ITEKGPLGEGPSRCFFGQVVAAIQHCH 156

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQS 87
           E Y + +++G GAF EV+L   +    ++A+K++ K + +K  + +   E + +  F+ S
Sbjct: 74  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P +VQL   F+D   +Y+VME + GG+L + ++    
Sbjct: 134 -----------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD 169
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             EK A     +V+ A+D +H   ++ +
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHR 197

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQS 87
           E Y + +++G GAF EV+L   +    ++A+K++ K + +K  + +   E + +  F+ S
Sbjct: 69  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P +VQL   F+D   +Y+VME + GG+L + ++    
Sbjct: 129 -----------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD 164
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             EK A     +V+ A+D +H   ++ +
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHR 192

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 25/148 (16%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRFSQS 87
           E Y + +++G GAF EV+L   +    ++A+K++ K  +  + DS    E + +  F+ S
Sbjct: 74  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P +VQL   F+D   +Y+VME + GG+L + ++    
Sbjct: 134 -----------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD 169
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             EK A     +V+ A+D +H   ++ +
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHR 197

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFEDKHK----VYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV +++ +E+ H     + ++ME + GGELF RI E+G  ++TE++A+ ++R +  A+
Sbjct: 63  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 165 DYMH 168
            ++H
Sbjct: 123 QFLH 126

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFEDKHK----VYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV +++ +E+ H     + ++ME + GGELF RI E+G  ++TE++A+ ++R +  A+
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 165 DYMH 168
            ++H
Sbjct: 142 QFLH 145

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK-KALKGKEDSLENEIKVLRRFSQS 87
           E Y + +++G GAF EV+L   + +  ++A+K++ K + +K  + +   E + +  F+ S
Sbjct: 75  EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P +VQL   F+D   +Y+VME + GG+L + ++    
Sbjct: 135 -----------------------PWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYD 170
Query: 148 YTEKDASMLIRQVLEAVDYMH 168
             EK A     +V+ A+D +H
Sbjct: 171 VPEKWAKFYTAEVVLALDAIH 191

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 24/151 (15%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
           P  + +YIL   LG G FS V LA+   N T  A+KI+  +  K   ++ E+EIK+L+R 
Sbjct: 15  PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV--RGDKVYTEAAEDEIKLLQR- 71
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRI 142
                      ND ++  +D     H  I++L++ F  K  + V++VM     GE    +
Sbjct: 72  ----------VNDADNTKEDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 143 VEKGSYTEKDASMLI-----RQVLEAVDYMH 168
           ++K  Y  +   ++      +Q+L  +DYMH
Sbjct: 120 IKK--YEHRGIPLIYVKQISKQLLLGLDYMH 148

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 24/151 (15%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
           P  + +YIL   LG G FS V LA+   N T  A+KI+  +  K   ++ E+EIK+L+R 
Sbjct: 15  PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV--RGDKVYTEAAEDEIKLLQR- 71
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRI 142
                      ND ++  +D     H  I++L++ F  K  + V++VM     GE    +
Sbjct: 72  ----------VNDADNTKEDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 143 VEKGSYTEKDASMLI-----RQVLEAVDYMH 168
           ++K  Y  +   ++      +Q+L  +DYMH
Sbjct: 120 IKK--YEHRGIPLIYVKQISKQLLLGLDYMH 148

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E  +L E +G G F EV     R + T+ AVK   +      +     E ++L+++S   
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--- 170
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                HPNIV+LI     K  +Y+VMELV GG+    +  +G+
Sbjct: 171 ---------------------HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA 208

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E  +L E +G G F EV     R + T+ AVK   +      +     E ++L+++S   
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--- 170
Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                HPNIV+LI     K  +Y+VMELV GG+    +  +G+
Sbjct: 171 ---------------------HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA 208

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           + +  ++G G F EV      + G M+A+K +DKK +K K    + E   L   ++ +  
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----QGETLAL---NERIML 243
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
            L  T D             P IV +   F    K+  +++L+ GG+L   + + G ++E
Sbjct: 244 SLVSTGDC------------PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 151 KDASMLIRQVLEAVDYMH 168
            D      +++  +++MH
Sbjct: 292 ADMRFYAAEIILGLEHMH 309

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           + +  ++G G F EV      + G M+A+K +DKK +K K    + E   L   ++ +  
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----QGETLAL---NERIML 242
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
            L  T D             P IV +   F    K+  +++L+ GG+L   + + G ++E
Sbjct: 243 SLVSTGDC------------PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 290
Query: 151 KDASMLIRQVLEAVDYMH 168
            D      +++  +++MH
Sbjct: 291 ADMRFYAAEIILGLEHMH 308

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL---------------------- 67
           +Y LK+ +G G++  V+LA +  + T +A+K++ KK L                      
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 68  ---KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
              +G  + +  EI +L++                        L HPN+V+L+E  +D +
Sbjct: 74  IQPRGPIEQVYQEIAILKK------------------------LDHPNVVKLVEVLDDPN 109
Query: 125 K--VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
           +  +Y+V ELV  G + +    K   +E  A    + +++ ++Y+H  + + +
Sbjct: 110 EDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHR 161

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           + +  ++G G F EV      + G M+A+K +DKK +K K    + E   L   ++ +  
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----QGETLAL---NERIML 243
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
            L  T D             P IV +   F    K+  +++L+ GG+L   + + G ++E
Sbjct: 244 SLVSTGDC------------PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 151 KDASMLIRQVLEAVDYMH 168
            D      +++  +++MH
Sbjct: 292 ADMRFYAAEIILGLEHMH 309

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           + +  ++G G F EV      + G M+A+K +DKK +K K    + E   L   ++ +  
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----QGETLAL---NERIML 243
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
            L  T D             P IV +   F    K+  +++L+ GG+L   + + G ++E
Sbjct: 244 SLVSTGDC------------PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 151 KDASMLIRQVLEAVDYMH 168
            D      +++  +++MH
Sbjct: 292 ADMRFYAAEIILGLEHMH 309

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 111 PNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAV 164
           P+IV++++ +E+    +  + +V E + GGELF RI ++G  ++TE++AS + + + EA+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 165 DYMH 168
            Y+H
Sbjct: 175 QYLH 178

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLR 82
           P   ++Y+    LG G F++       +   +FA K++ K  L    +++ +  EI    
Sbjct: 22  PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI---- 77
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
               ++H  LD                +P++V     FED   VY+V+E+     L +  
Sbjct: 78  ----AIHKSLD----------------NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 117
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             + + TE +A   +RQ ++ V Y+H  R + +
Sbjct: 118 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 150

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLR 82
           P   ++Y+    LG G F++       +   +FA K++ K  L    +++ +  EI    
Sbjct: 38  PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI---- 93
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
               ++H  LD                +P++V     FED   VY+V+E+     L +  
Sbjct: 94  ----AIHKSLD----------------NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 133
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             + + TE +A   +RQ ++ V Y+H  R + +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLR 82
           P   ++Y+    LG G F++       +   +FA K++ K  L    +++ +  EI    
Sbjct: 38  PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI---- 93
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
               ++H  LD                +P++V     FED   VY+V+E+     L +  
Sbjct: 94  ----AIHKSLD----------------NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 133
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             + + TE +A   +RQ ++ V Y+H  R + +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLR 82
           P   ++Y+    LG G F++       +   +FA K++ K  L    +++ +  EI    
Sbjct: 38  PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI---- 93
Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
               ++H  LD                +P++V     FED   VY+V+E+     L +  
Sbjct: 94  ----AIHKSLD----------------NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 133
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             + + TE +A   +RQ ++ V Y+H  R + +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 24/145 (16%)
Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           ILK ++G GAFSEV + + ++ G ++A+KI++K  +  +      E+   R         
Sbjct: 65  ILK-VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR-----GEVSCFR--------- 109
Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEK 151
             E  D   N  D+  +T     QL   F+D++ +YLVME   GG+L   + + G     
Sbjct: 110 --EERDVLVN-GDRRWIT-----QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA 161
Query: 152 D-ASMLIRQVLEAVDYMHEARYLSK 175
           + A   + +++ A+D +H   Y+ +
Sbjct: 162 EMARFYLAEIVMAIDSVHRLGYVHR 186

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+F +V + +  +   M+A+K ++K+    +     NE++ + +  Q +        
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER-----NEVRNVFKELQIMQG------ 71
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                      L HP +V L  +F+D+  +++V++L+ GG+L   + +   + E+   + 
Sbjct: 72  -----------LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 157 IRQVLEAVDYMHEARYLSK 175
           I +++ A+DY+   R + +
Sbjct: 121 ICELVMALDYLQNQRIIHR 139

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 25  PSIE-----EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK 79
           PS++     E + L ++LG G+F +V LAE ++    FA+K + KK +   +D +E  + 
Sbjct: 9   PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMV 67
Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
             R  S +                      HP +  +  TF+ K  ++ VME + GG+L 
Sbjct: 68  EKRVLSLA--------------------WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM 107
Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
             I     +    A+    +++  + ++H
Sbjct: 108 YHIQSCHKFDLSRATFYAAEIILGLQFLH 136

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA    +    AVK++           L  +     RF +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--------LARDPSFYLRFRR 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV + +T E +       Y+VME V G  L D +
Sbjct: 62  EAQN--------------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 107
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA    +    AVK++           L  +     RF +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--------LARDPSFYLRFRR 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV + +T E +       Y+VME V G  L D +
Sbjct: 62  EAQN--------------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 107
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA    +    AVK++           L  +     RF +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--------LARDPSFYLRFRR 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV + +T E +       Y+VME V G  L D +
Sbjct: 62  EAQN--------------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 107
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V LA+ +    ++A+KI+ KK +  ++D +E  +       + V   LD+ 
Sbjct: 26  VLGKGSFGKVMLADRKGTEELYAIKIL-KKDVVIQDDDVECTM-----VEKRVLALLDKP 79
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                          P + QL   F+   ++Y VME V GG+L   I + G + E  A  
Sbjct: 80  ---------------PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 156 LIRQVLEAVDYMHE 169
              ++   + ++H+
Sbjct: 125 YAAEISIGLFFLHK 138

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL +    
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS- 79
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P + +   ++    K++++ME + GG   D ++E G 
Sbjct: 80  -----------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP 115
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + ++R++L+ +DY+H  +
Sbjct: 116 LDETQIATILREILKGLDYLHSEK 139

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 30/137 (21%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G+F EV   E ++ G   AVK +  +  + +E         L   +           
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE---------LMACAG---------- 141
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                      LT P IV L     +   V + MEL+ GG L   + E+G   E  A   
Sbjct: 142 -----------LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 190
Query: 157 IRQVLEAVDYMHEARYL 173
           + Q LE ++Y+H  R L
Sbjct: 191 LGQALEGLEYLHSRRIL 207

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL +    
Sbjct: 26  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS- 84
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P + +   ++    K++++ME + GG   D ++E G 
Sbjct: 85  -----------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP 120
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + ++R++L+ +DY+H  +
Sbjct: 121 LDETQIATILREILKGLDYLHSEK 144

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 30/137 (21%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           LG G+F EV   E ++ G   AVK +  +  + +E         L   +           
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE---------LMACAG---------- 122
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                      LT P IV L     +   V + MEL+ GG L   + E+G   E  A   
Sbjct: 123 -----------LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 171
Query: 157 IRQVLEAVDYMHEARYL 173
           + Q LE ++Y+H  R L
Sbjct: 172 LGQALEGLEYLHSRRIL 188

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL +    
Sbjct: 6   EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS- 64
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P + +   ++    K++++ME + GG   D ++E G 
Sbjct: 65  -----------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP 100
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + ++R++L+ +DY+H  +
Sbjct: 101 LDETQIATILREILKGLDYLHSEK 124

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL +    
Sbjct: 6   EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS- 64
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P + +   ++    K++++ME + GG   D ++E G 
Sbjct: 65  -----------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP 100
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + ++R++L+ +DY+H  +
Sbjct: 101 LDETQIATILREILKGLDYLHSEK 124

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA         AVK++           L  +     RF +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--------LARDPSFYLRFRR 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV + +T E +       Y+VME V G  L D +
Sbjct: 62  EAQN--------------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 107
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA         AVK++           L  +     RF +
Sbjct: 27  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVL--------RADLARDPSFYLRFRR 78
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV + +T E +       Y+VME V G  L D +
Sbjct: 79  EAQN--------------AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 124
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 125 HTEGPMTPKRAIEVIADACQALNFSHQ 151

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAV---KIIDKKALKGKEDSLENEIKVLRRFSQ 86
           KY++ +LLG G++ +V+     E     AV   K    + +   E +++ EI++LR    
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR---- 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF--EDKHKVYLVMELVTGG--ELFDRI 142
                               RL H N++QL++    E+K K+Y+VME    G  E+ D +
Sbjct: 62  --------------------RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV 101
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMH 168
            EK  +    A     Q+++ ++Y+H
Sbjct: 102 PEK-RFPVCQAHGYFCQLIDGLEYLH 126

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   + +G G+F EV          + A+KIID +  + + + ++ EI VL      
Sbjct: 18  EELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVL------ 71
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                              +   P I +   ++    K++++ME + GG   D +++ G 
Sbjct: 72  ------------------SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGP 112
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + ++R++L+ +DY+H  R
Sbjct: 113 LEETYIATILREILKGLDYLHSER 136

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 26/147 (17%)
Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + ++Y L E+LG G  SEV LA         AVK++       + D L  +     RF +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVL-------RAD-LARDPSFYLRFRR 61
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV----YLVMELVTGGELFDRI 142
              N                 L HP IV +  T E +       Y+VME V G  L D +
Sbjct: 62  EAQN--------------AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV 107
Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +G  T K A  +I    +A+++ H+
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V LA  + +G   AVK++D +  + +E  L NE+ ++R +            
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE-LLFNEVVIMRDYQ----------- 100
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++ +++    +++++ME + GG L D IV +    E+  + +
Sbjct: 101 -------------HFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATV 146
Query: 157 IRQVLEAVDYMH 168
              VL+A+ Y+H
Sbjct: 147 CEAVLQALAYLH 158

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           + + L  ++G G++++V L   ++   ++A+K++ K+ +   ED   ++ E  V  + S 
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 67
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +V L   F+ + +++ V+E V GG+L   +  + 
Sbjct: 68  ----------------------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 105
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
              E+ A     ++  A++Y+HE
Sbjct: 106 KLPEEHARFYSAEISLALNYLHE 128

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           + + L  ++G G++++V L   ++   ++A+K++ K+ +   ED   ++ E  V  + S 
Sbjct: 5   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 63
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +V L   F+ + +++ V+E V GG+L   +  + 
Sbjct: 64  ----------------------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 101
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
              E+ A     ++  A++Y+HE
Sbjct: 102 KLPEEHARFYSAEISLALNYLHE 124

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           + + L  ++G G++++V L   ++   ++A+K++ K+ +   ED   ++ E  V  + S 
Sbjct: 20  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 78
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +V L   F+ + +++ V+E V GG+L   +  + 
Sbjct: 79  ----------------------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 116
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
              E+ A     ++  A++Y+HE
Sbjct: 117 KLPEEHARFYSAEISLALNYLHE 139

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 73
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 74  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 112
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHR 140

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           EE +   E +G G+F EV          + A+KIID +  + + + ++ EI VL +   S
Sbjct: 22  EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                    + +   ++    K++++ME + GG   D ++  G 
Sbjct: 82  Y------------------------VTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGP 116
Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
           + E   + +++++L+ +DY+H  +
Sbjct: 117 FDEFQIATMLKEILKGLDYLHSEK 140

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 73
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 74  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 112
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHR 140

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 73
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 74  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 112
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHR 140

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           + + L  ++G G++++V L   ++   ++A++++ K+ +   ED   ++ E  V  + S 
Sbjct: 52  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS- 110
Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +V L   F+ + +++ V+E V GG+L   +  + 
Sbjct: 111 ----------------------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 148
Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
              E+ A     ++  A++Y+HE
Sbjct: 149 KLPEEHARFYSAEISLALNYLHE 171

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 20  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 74
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 75  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 113
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHR 141

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 20  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRE---- 74
Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                      N N         PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 75  -----------NKN---------PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 113
Query: 148 YTEKDASMLIRQVLEAVDYMHEARYLSK 175
             E   + + R+ L+A++++H  + + +
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHR 141

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 21/125 (16%)
Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V L+E +    ++AVKI+ K  +   +D    E  ++ +   ++  +    
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV---ECTMVEKRVLALPGK---- 79
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM 155
                          P + QL   F+   ++Y VME V GG+L   I + G + E  A  
Sbjct: 80  --------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF 125
Query: 156 LIRQV 160
              ++
Sbjct: 126 YAAEI 130

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM 167
           L+ P IV L     +   V + MEL+ GG L   I + G   E  A   + Q LE ++Y+
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 166
Query: 168 HEARYL 173
           H  R L
Sbjct: 167 HTRRIL 172

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM 167
           L+ P IV L     +   V + MEL+ GG L   I + G   E  A   + Q LE ++Y+
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 180
Query: 168 HEARYL 173
           H  R L
Sbjct: 181 HTRRIL 186

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM 167
           L+ P IV L     +   V + MEL+ GG L   I + G   E  A   + Q LE ++Y+
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 182
Query: 168 HEARYL 173
           H  R L
Sbjct: 183 HTRRIL 188

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 27/146 (18%)
Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +Y +   LG G FS V L    +     A+K++ K A    E +L +EIK+L+   +S  
Sbjct: 32  RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV-KSAQHYTETAL-DEIKLLKCVRES-- 87
Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFE----DKHKVYLVMELVTGGELFDRIVEK 145
                  D +  +KD        +VQLI+ F+    +   V +V E V G  L   I+ K
Sbjct: 88  -------DPSDPNKDM-------VVQLIDDFKISGMNGIHVCMVFE-VLGHHLLKWII-K 131
Query: 146 GSYTE---KDASMLIRQVLEAVDYMH 168
            +Y     +    +IRQVL+ +DY+H
Sbjct: 132 SNYQGLPVRCVKSIIRQVLQGLDYLH 157

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET 95
           +LG G+F +V L+E +    ++AVKI+ K  +   +D    E  ++ +   ++  +    
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV---ECTMVEKRVLALPGK---- 400
Query: 96  NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                          P + QL   F+   ++Y VME V GG+L   I + G + E  A
Sbjct: 401 --------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 444

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 31/145 (21%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           ++L ++LG GA + V     ++ G +FA+K+ +  +     D    E +VL+        
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK-------- 62
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFED---KHKVYLVMELVTGGELFDRIVEKG- 146
                           +L H NIV+L    E+   +HKV L+ME    G L+  + E   
Sbjct: 63  ----------------KLNHKNIVKLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSN 105
Query: 147 SYTEKDASMLI--RQVLEAVDYMHE 169
           +Y   ++  LI  R V+  ++++ E
Sbjct: 106 AYGLPESEFLIVLRDVVGGMNHLRE 130

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 75
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 76  -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 121
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 122 CLAVLQALSVLH 133

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 86
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 87  -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 132
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 133 CLAVLQALSVLH 144

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 79
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 80  -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 125
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 126 CLAVLQALSVLH 137

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 206
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 207 -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 252
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 253 CLAVLQALSVLH 264

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 129
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 130 -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 175
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 176 CLAVLQALSVLH 187

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 37  LGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN 96
           +G G+   V +A  R +G + AVK +D +  + +E  L NE+ ++R +            
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-LLFNEVVIMRDYQ----------- 84
Query: 97  DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASML 156
                        H N+V++  ++    ++++VME + GG L D IV      E+  + +
Sbjct: 85  -------------HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAV 130
Query: 157 IRQVLEAVDYMH 168
              VL+A+  +H
Sbjct: 131 CLAVLQALSVLH 142

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 33/151 (21%)
Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L EL+G G + +V      + G + A+K++D      +E+ ++ EI +L+++S       
Sbjct: 28  LVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDEEEEIKQEINMLKKYSH------ 79
Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRI--VE 144
                            H NI      F  K+      +++LVME    G + D I   +
Sbjct: 80  -----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEARYLSK 175
             +  E+  + + R++L  + ++H+ + + +
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHR 153

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 31/145 (21%)
Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           ++L ++LG GA + V     ++ G +FA+K+ +  +     D    E +VL+        
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK-------- 62
Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFED---KHKVYLVMELVTGGELFDRIVEKGS 147
                           +L H NIV+L    E+   +HKV L+ME    G L+  + E  +
Sbjct: 63  ----------------KLNHKNIVKLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSN 105
Query: 148 ---YTEKDASMLIRQVLEAVDYMHE 169
                E +  +++R V+  ++++ E
Sbjct: 106 AYGLPESEFLIVLRDVVGGMNHLRE 130

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 35/145 (24%)
Query: 29  EKYILKELLGTGAFSEV-RLAESRENGTMFA--VKIIDKKALKGKEDSL-ENEIKVLRRF 84
           EKY++ E LG G F  V R  E+    T  A  VK+      KG +  L + EI +L   
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV------KGTDQVLVKKEISIL--- 55
Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-V 143
                        N +         H NI+ L E+FE   ++ ++ E ++G ++F+RI  
Sbjct: 56  -------------NIAR--------HRNILHLHESFESMEELVMIFEFISGLDIFERINT 94
Query: 144 EKGSYTEKDASMLIRQVLEAVDYMH 168
                 E++    + QV EA+ ++H
Sbjct: 95  SAFELNEREIVSYVHQVCEALQFLH 119

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-59
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-58
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-57
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-56
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-56
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-56
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-55
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-55
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-55
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-55
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-55
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-54
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-54
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-54
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-54
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-53
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-53
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-53
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-52
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-51
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-51
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-50
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-50
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-50
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-50
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-50
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-50
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-49
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-47
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-47
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-47
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-45
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-45
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-43
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-42
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-38
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-38
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-38
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-37
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-36
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-35
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-35
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-35
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-35
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-35
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-35
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-34
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-34
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-34
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-34
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-33
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-33
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-33
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-32
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-32
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-32
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-32
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-31
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-31
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-30
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-29
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-28
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-28
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-27
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-27
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-25
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-25
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-23
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-22
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-22
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-22
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-21
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-21
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-20
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-19
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-19
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-19
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	9e-18
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-17
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-17
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-17
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-17
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-17
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-17
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-16
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-16
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-16
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-16
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-16
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-14
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-13
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-12
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	6e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-11
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	8e-11
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-10
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-10
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-10
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-10
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-10
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-10
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-10
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-09
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-09
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	9e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-08
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	7e-08
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	8e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	8e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-07
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-07
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	9e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-07
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	7e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	7e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-04

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  187 bits (476), Expect = 1e-59
 Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 25/148 (16%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
           ++  +I + +I  E+LG+GAFSEV L + R  G +FA+K I KK+   ++ SLENEI VL
Sbjct: 2   MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI-KKSPAFRDSSLENEIAVL 60

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           ++                        + H NIV L + +E     YLVM+LV+GGELFDR
Sbjct: 61  KK------------------------IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR 96

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           I+E+G YTEKDAS++I+QVL AV Y+HE
Sbjct: 97  ILERGVYTEKDASLVIQQVLSAVKYLHE 124

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  185 bits (472), Expect = 2e-58
 Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 25/169 (14%)

Query: 2   PLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKI 61
           P        +++ +  +          + Y +KE LG GAFS VR    +  G  FA KI
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 62  IDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
           I+ K L  ++   LE E ++ R+                        L HPNIV+L ++ 
Sbjct: 62  INTKKLSARDFQKLEREARICRK------------------------LQHPNIVRLHDSI 97

Query: 121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +++   YLV +LVTGGELF+ IV +  Y+E DAS  I+Q+LE++ Y H 
Sbjct: 98  QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  180 bits (460), Expect = 2e-57
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 25/146 (17%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRR 83
               + Y +KE LG GAFS VR    +  G  FA KII+ K L  ++   LE E ++ R+
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                   L HPNIV+L ++ +++   YLV +LVTGGELF+ IV
Sbjct: 62  ------------------------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 97

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHE 169
            +  Y+E DAS  I+Q+LE++ Y H 
Sbjct: 98  AREFYSEADASHCIQQILESIAYCHS 123

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  178 bits (453), Expect = 2e-56
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 25/159 (15%)

Query: 12  KLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE 71
                G++N     +  E+Y +  +LG G+F EV   + R     +AVK+I+K + K K+
Sbjct: 5   HHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64

Query: 72  -DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
             ++  E+++L++                        L HPNI++L E  ED    Y+V 
Sbjct: 65  TSTILREVELLKK------------------------LDHPNIMKLFEILEDSSSFYIVG 100

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           EL TGGELFD I+++  ++E DA+ +I+QV   + YMH+
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  179 bits (455), Expect = 2e-56
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 25/146 (17%)

Query: 25  PSIEEKYIL-KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
              E+ Y L +++LG GA + V+   +      +AVKII+K+    +   +  E+++L +
Sbjct: 8   GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR-VFREVEMLYQ 66

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                     H N+++LIE FE++ + YLV E + GG +   I 
Sbjct: 67  CQG-----------------------HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH 103

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHE 169
           ++  + E +AS++++ V  A+D++H 
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHN 129

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  177 bits (451), Expect = 3e-56
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 25/147 (17%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLR 82
               I + Y L+  +G G++ EV++A  +      A K I K  ++  +   + EI++++
Sbjct: 3   TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMK 61

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
                                    L HPNI++L ETFED   +YLVMEL TGGELF+R+
Sbjct: 62  S------------------------LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
           V K  + E DA+ +++ VL AV Y H+
Sbjct: 98  VHKRVFRESDAARIMKDVLSAVAYCHK 124

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  176 bits (448), Expect = 1e-55
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 29/149 (19%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLENEIKV 80
            +E+ Y + E LG+G F+ VR    +  G  +A K I K+ L         + +E E+ +
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           LR                         + HPNI+ L + FE+K  V L++ELV+GGELFD
Sbjct: 62  LRE------------------------IRHPNIITLHDIFENKTDVVLILELVSGGELFD 97

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
            + EK S TE +A+  ++Q+L+ V Y+H 
Sbjct: 98  FLAEKESLTEDEATQFLKQILDGVHYLHS 126

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  177 bits (452), Expect = 1e-55
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 27/164 (16%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
                  L  D   +     ++ + + ++  LG GA S V   + +     +A+K++ K 
Sbjct: 30  AAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT 89

Query: 66  ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK 125
                +  +  EI VL R                        L+HPNI++L E FE   +
Sbjct: 90  V---DKKIVRTEIGVLLR------------------------LSHPNIIKLKEIFETPTE 122

Query: 126 VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           + LV+ELVTGGELFDRIVEKG Y+E+DA+  ++Q+LEAV Y+HE
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  175 bits (447), Expect = 2e-55
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 31/155 (20%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA--------LKGKEDSL 74
                 E Y  KE+LG G  S VR    +     +AVKIID           ++   ++ 
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70

Query: 75  ENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVT 134
             E+ +LR+ S                        HPNI+QL +T+E     +LV +L+ 
Sbjct: 71  LKEVDILRKVSG-----------------------HPNIIQLKDTYETNTFFFLVFDLMK 107

Query: 135 GGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
            GELFD + EK + +EK+   ++R +LE +  +H+
Sbjct: 108 KGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  177 bits (451), Expect = 3e-55
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 30/154 (19%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-------SLE 75
                 +KY  K+++G G  S VR    R  G  FAVKI++  A +   +       +  
Sbjct: 88  AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147

Query: 76  NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG 135
            E  +LR+ +                        HP+I+ LI+++E    ++LV +L+  
Sbjct: 148 RETHILRQVAG-----------------------HPHIITLIDSYESSSFMFLVFDLMRK 184

Query: 136 GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           GELFD + EK + +EK+   ++R +LEAV ++H 
Sbjct: 185 GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  175 bits (445), Expect = 8e-55
 Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLEN 76
            K   +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E 
Sbjct: 5   FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG 136
           E+ +LR+                        + H N++ L + +E++  V L++ELV+GG
Sbjct: 65  EVSILRQ------------------------VLHHNVITLHDVYENRTDVVLILELVSGG 100

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           ELFD + +K S +E++A+  I+Q+L+ V+Y+H 
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  173 bits (442), Expect = 2e-54
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 29/153 (18%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLEN 76
            +  ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K        + +E 
Sbjct: 4   FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG 136
           E+ +L+                         + HPN++ L E +E+K  V L++ELV GG
Sbjct: 64  EVSILKE------------------------IQHPNVITLHEVYENKTDVILILELVAGG 99

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           ELFD + EK S TE++A+  ++Q+L  V Y+H 
Sbjct: 100 ELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  174 bits (442), Expect = 3e-54
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 35/169 (20%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           M   G     ++L +             + Y +KE +G G++S  +    +     FAVK
Sbjct: 1   MQTVGVHSIVQQLHR-------NSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVK 53

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
           IIDK      E     EI++L R+ Q                       HPNI+ L + +
Sbjct: 54  IIDKSKRDPTE-----EIEILLRYGQ-----------------------HPNIITLKDVY 85

Query: 121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +D   VY+V EL+ GGEL D+I+ +  ++E++AS ++  + + V+Y+H 
Sbjct: 86  DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  174 bits (442), Expect = 5e-54
 Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 29/153 (18%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-----DSLEN 76
            K   +E+ Y + E LG+G F+ V+    +  G  +A K I K+  +        + +E 
Sbjct: 5   FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG 136
           E+ +LR+                        + HPNI+ L + +E++  V L++ELV+GG
Sbjct: 65  EVSILRQ------------------------VLHPNIITLHDVYENRTDVVLILELVSGG 100

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           ELFD + +K S +E++A+  I+Q+L+ V+Y+H 
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  172 bits (437), Expect = 5e-54
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 28/157 (17%)

Query: 17  GKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN 76
           G++N     +I++ +I K  LG+GAF +V L E R +G    +K I+K   +   + +E 
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG 136
           EI+VL+                         L HPNI+++ E FED H +Y+VME   GG
Sbjct: 70  EIEVLKS------------------------LDHPNIIKIFEVFEDYHNMYIVMETCEGG 105

Query: 137 ELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHE 169
           EL +RIV       + +E   + L++Q++ A+ Y H 
Sbjct: 106 ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  175 bits (445), Expect = 1e-53
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 25/149 (16%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKV 80
           I      E+Y L E LG GAFS VR       G  +A  II+ K L  ++   LE E ++
Sbjct: 4   ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
            R                         L HPNIV+L ++  ++   YL+ +LVTGGELF+
Sbjct: 64  CRL------------------------LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE 99

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
            IV +  Y+E DAS  I+Q+LEAV + H+
Sbjct: 100 DIVAREYYSEADASHCIQQILEAVLHCHQ 128

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  171 bits (436), Expect = 3e-53
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 32/155 (20%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE----DSLENEI 78
                E+ Y L E++G G FS VR   +RE G  FAVKI+D            + L+ E 
Sbjct: 18  DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
            +                           L HP+IV+L+ET+     +Y+V E + G +L
Sbjct: 78  SICHM------------------------LKHPHIVELLETYSSDGMLYMVFEFMDGADL 113

Query: 139 FDRIVEKGS----YTEKDASMLIRQVLEAVDYMHE 169
              IV++      Y+E  AS  +RQ+LEA+ Y H+
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  170 bits (432), Expect = 6e-53
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 30/151 (19%)

Query: 22  IKGPSIEEKYIL---KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEI 78
           +K     + Y L    + LG G+FS  R    +++   FAVKII K+     E + + EI
Sbjct: 1   MKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEI 56

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
             L+                           HPNIV+L E F D+   +LVMEL+ GGEL
Sbjct: 57  TALKLCEG-----------------------HPNIVKLHEVFHDQLHTFLVMELLNGGEL 93

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           F+RI +K  ++E +AS ++R+++ AV +MH+
Sbjct: 94  FERIKKKKHFSETEASYIMRKLVSAVSHMHD 124

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  167 bits (425), Expect = 7e-52
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 32/151 (21%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-------SLENEI 78
           ++ ++YI+ + LG+GA  EV+LA  R+     A+KII K+              ++E EI
Sbjct: 7   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           ++L++                        L HP I+++   F+ +   Y+V+EL+ GGEL
Sbjct: 67  EILKK------------------------LNHPCIIKIKNFFDAED-YYIVLELMEGGEL 101

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           FD++V      E    +   Q+L AV Y+HE
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  167 bits (424), Expect = 4e-51
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 26/157 (16%)

Query: 14  KKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS 73
           K   +  E+K  S+ + Y + E LG+GAF  V     +  G +F  K I+      K   
Sbjct: 36  KYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT- 94

Query: 74  LENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELV 133
           ++NEI ++ +                        L HP ++ L + FEDK+++ L++E +
Sbjct: 95  VKNEISIMNQ------------------------LHHPKLINLHDAFEDKYEMVLILEFL 130

Query: 134 TGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHE 169
           +GGELFDRI  +    +E +    +RQ  E + +MHE
Sbjct: 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  167 bits (424), Expect = 9e-51
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 32/159 (20%)

Query: 18  KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED----- 72
            D  +   ++ ++YI+ + LG+GA  EV+LA  R+     A++II K+            
Sbjct: 124 DDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADP 183

Query: 73  --SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
             ++E EI++L++                        L HP I+++   F+ +   Y+V+
Sbjct: 184 ALNVETEIEILKK------------------------LNHPCIIKIKNFFDAED-YYIVL 218

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           EL+ GGELFD++V      E    +   Q+L AV Y+HE
Sbjct: 219 ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  166 bits (421), Expect = 1e-50
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 28/152 (18%)

Query: 21  EIKGPSIEEKYIL--KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEI 78
             K  ++   Y +   E+LG G F +V   E    G   A KII  + +K KE+ ++NEI
Sbjct: 79  TAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE-VKNEI 137

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
            V+ +                        L H N++QL + FE K+ + LVME V GGEL
Sbjct: 138 SVMNQ------------------------LDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173

Query: 139 FDRIVEKG-SYTEKDASMLIRQVLEAVDYMHE 169
           FDRI+++  + TE D  + ++Q+ E + +MH+
Sbjct: 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  164 bits (417), Expect = 1e-50
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 27/144 (18%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + EKY++ E LG G F  V       +   +  K +  K     +  ++ EI +L     
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--QVLVKKEISILNI--- 57

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  H NI+ L E+FE   ++ ++ E ++G ++F+RI    
Sbjct: 58  ---------------------ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSA 96

Query: 147 -SYTEKDASMLIRQVLEAVDYMHE 169
               E++    + QV EA+ ++H 
Sbjct: 97  FELNEREIVSYVHQVCEALQFLHS 120

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  163 bits (414), Expect = 4e-50
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
              S   L  +    +    +    Y +  + LG G F+ VR   S+  G  +A K + K
Sbjct: 6   HHSSGVDLGTENLYFQ-SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKK 64

Query: 65  KALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK 123
           +         + +EI VL                             P ++ L E +E+ 
Sbjct: 65  RRRGQDCRAEILHEIAVLELAKS-----------------------CPRVINLHEVYENT 101

Query: 124 HKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHE 169
            ++ L++E   GGE+F   + +     +E D   LI+Q+LE V Y+H+
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  168 bits (427), Expect = 5e-50
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)

Query: 14  KKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS 73
           +   +  EIK   + + Y + E LGTGAF  V     R  G  FA K +       KE  
Sbjct: 142 QYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET- 200

Query: 74  LENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELV 133
           +  EI+ +                          L HP +V L + FED +++ ++ E +
Sbjct: 201 VRKEIQTMSV------------------------LRHPTLVNLHDAFEDDNEMVMIYEFM 236

Query: 134 TGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHE 169
           +GGELF+++  E    +E +A   +RQV + + +MHE
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  166 bits (422), Expect = 6e-50
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 26/149 (17%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKV 80
                 ++Y  + +LG G+F EV L + +  G   AVK+I K+ +K K D  SL  E+++
Sbjct: 20  STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L++                        L HPNI++L E FEDK   YLV E+ TGGELFD
Sbjct: 80  LKQ------------------------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 115

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
            I+ +  ++E DA+ +IRQVL  + YMH+
Sbjct: 116 EIISRKRFSEVDAARIIRQVLSGITYMHK 144

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  166 bits (421), Expect = 9e-50
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 25/159 (15%)

Query: 12  KLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE 71
                G++N     +  E+Y +  +LG G+F EV   + R     +AVK+I+K + K K+
Sbjct: 5   HHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64

Query: 72  -DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
             ++  E+++L++                        L HPNI++L E  ED    Y+V 
Sbjct: 65  TSTILREVELLKK------------------------LDHPNIMKLFEILEDSSSFYIVG 100

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           EL TGGELFD I+++  ++E DA+ +I+QV   + YMH+
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  163 bits (414), Expect = 9e-49
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 25/148 (16%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVL 81
           K   + E Y   + LG+GA+ EV L   +      A+KII K ++    +S L  E+ VL
Sbjct: 31  KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL 90

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           +                         L HPNI++L + FEDK   YLVME   GGELFD 
Sbjct: 91  KL------------------------LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           I+ +  + E DA+++I+QVL  V Y+H+
Sbjct: 127 IIHRMKFNEVDAAVIIKQVLSGVTYLHK 154

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  160 bits (406), Expect = 2e-47
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 36/159 (22%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL------------KGK 70
           K   I E Y     LG+GA+ EV L + +   +  A+K+I K               +  
Sbjct: 30  KEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKF 89

Query: 71  EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
            + + NEI +L+                         L HPNI++L + FEDK   YLV 
Sbjct: 90  HEEIYNEISLLKS------------------------LDHPNIIKLFDVFEDKKYFYLVT 125

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           E   GGELF++I+ +  + E DA+ +++Q+L  + Y+H+
Sbjct: 126 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  154 bits (392), Expect = 3e-47
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 35/153 (22%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLR 82
           K   I++  +  ++LG G   +V    ++     FA+K++              E+++  
Sbjct: 12  KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK------ARREVELHW 65

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGEL 138
           R SQ                        P+IV++++ +E+    +  + +VME + GGEL
Sbjct: 66  RASQ-----------------------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL 102

Query: 139 FDRIVEKG--SYTEKDASMLIRQVLEAVDYMHE 169
           F RI ++G  ++TE++AS +++ + EA+ Y+H 
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  155 bits (394), Expect = 4e-47
 Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 36/171 (21%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYIL-KELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
               +  L+   +  E K  ++ + Y L K++LG G   +V     R  G   A+K++  
Sbjct: 5   HHHHSSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD 64

Query: 65  KALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
                +      E+    + S                         P+IV +++ +E+ H
Sbjct: 65  SPKARQ------EVDHHWQASG-----------------------GPHIVCILDVYENMH 95

Query: 125 ----KVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHE 169
                + ++ME + GGELF RI E+G  ++TE++A+ ++R +  A+ ++H 
Sbjct: 96  HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  152 bits (387), Expect = 2e-45
 Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 35/170 (20%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
                 +          K   I++  +  ++LG G   +V    ++     FA+K++   
Sbjct: 39  PPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC 98

Query: 66  ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--- 122
                      E+++  R SQ                        P+IV++++ +E+   
Sbjct: 99  PK------ARREVELHWRASQ-----------------------CPHIVRIVDVYENLYA 129

Query: 123 -KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHE 169
            +  + +VME + GGELF RI ++G  ++TE++AS +++ + EA+ Y+H 
Sbjct: 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  149 bits (379), Expect = 4e-45
 Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 29/149 (19%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +    ++L ++LG GA + V     ++ G +FA+K+ +  +     D    E +VL+   
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK--- 62

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIV 143
                                +L H NIV+L    E+       L+ME    G L+  + 
Sbjct: 63  ---------------------KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE 101

Query: 144 EKGS---YTEKDASMLIRQVLEAVDYMHE 169
           E  +     E +  +++R V+  ++++ E
Sbjct: 102 EPSNAYGLPESEFLIVLRDVVGGMNHLRE 130

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  147 bits (372), Expect = 2e-43
 Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 29/149 (19%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +    ++L ++LG GA + V     ++ G +FA+K+ +  +     D    E +VL+   
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK--- 62

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIV 143
                                +L H NIV+L    E+       L+ME    G L+  + 
Sbjct: 63  ---------------------KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE 101

Query: 144 EKGS---YTEKDASMLIRQVLEAVDYMHE 169
           E  +     E +  +++R V+  ++++ E
Sbjct: 102 EPSNAYGLPESEFLIVLRDVVGGMNHLRE 130

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  143 bits (361), Expect = 4e-42
 Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 68/191 (35%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK----GKEDSLENEI 78
               +++KY LK  +G G++  VR+A   +   + A+KI++K  ++       + ++ E+
Sbjct: 20  SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           +++++                        L HPNI +L E +ED+  + LVMEL  GG L
Sbjct: 80  RLMKK------------------------LHHPNIARLYEVYEDEQYICLVMELCHGGHL 115

Query: 139 FDRIVEKG----------------------------------------SYTEKDASMLIR 158
            D++                                               EK  S ++R
Sbjct: 116 LDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175

Query: 159 QVLEAVDYMHE 169
           Q+  A+ Y+H 
Sbjct: 176 QIFSALHYLHN 186

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  131 bits (333), Expect = 2e-38
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIK 79
           +  P    +Y+    LG G F++       +   +FA KI+ K  L    + + +  EI 
Sbjct: 8   LVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS 67

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           + R                         L H ++V     FED   V++V+EL     L 
Sbjct: 68  IHRS------------------------LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 103

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +    + + TE +A   +RQ++    Y+H 
Sbjct: 104 ELHKRRKALTEPEARYYLRQIVLGCQYLHR 133

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  130 bits (328), Expect = 7e-38
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 24/140 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI + +      
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM----- 61

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 62  -------------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102

Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  131 bits (331), Expect = 9e-38
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIK 79
           +  P    +Y+    LG G F++       +   +FA KI+ K  L    + + +  EI 
Sbjct: 34  LVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS 93

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELF 139
           + R                         L H ++V     FED   V++V+EL     L 
Sbjct: 94  IHRS------------------------LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 129

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +    + + TE +A   +RQ++    Y+H 
Sbjct: 130 ELHKRRKALTEPEARYYLRQIVLGCQYLHR 159

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  128 bits (324), Expect = 8e-37
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 24/140 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI + +      
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM----- 61

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 62  -------------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102

Query: 149 TEKDASMLIRQVLEAVDYMH 168
            E DA     Q++  V Y+H
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH 122

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  129 bits (327), Expect = 2e-36
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 31/163 (19%)

Query: 9   SAKKLKKDGKDNEIKGPSIEE-KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL 67
           S+  L++D  D E     + +  +  K++LG GA   +       +    AVK I  +  
Sbjct: 3   SSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECF 61

Query: 68  KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVY 127
                  + E+++LR   +                       HPN+++   T +D+   Y
Sbjct: 62  ----SFADREVQLLRESDE-----------------------HPNVIRYFCTEKDRQFQY 94

Query: 128 LVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHE 169
           + +EL     L + + +K  ++   +   L++Q    + ++H 
Sbjct: 95  IAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  127 bits (322), Expect = 1e-35
 Identities = 29/151 (19%), Positives = 51/151 (33%), Gaps = 36/151 (23%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           S++   + +++LG G+   V        G   AVK +         D    EIK+L    
Sbjct: 12  SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID----FCDIALMEIKLLTESD 66

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                   HPN+++   +      +Y+ +EL     L D +  K
Sbjct: 67  D-----------------------HPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESK 102

Query: 146 GSY-------TEKDASMLIRQVLEAVDYMHE 169
                      E +   L+RQ+   V ++H 
Sbjct: 103 NVSDENLKLQKEYNPISLLRQIASGVAHLHS 133

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  124 bits (314), Expect = 2e-35
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 40/157 (25%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
               +    +LG GAF +V  A +  +   +A+K I     + K  ++ +E+ +L     
Sbjct: 4   YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLAS--- 58

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED-------------KHKVYLVMELV 133
                                L H  +V+    + +             K  +++ ME  
Sbjct: 59  ---------------------LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYC 97

Query: 134 TGGELFDRIVEKGSYTEKDASM-LIRQVLEAVDYMHE 169
             G L+D I  +    ++D    L RQ+LEA+ Y+H 
Sbjct: 98  ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS 134

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  123 bits (312), Expect = 2e-35
 Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 26/143 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQ 86
           E + +   LG G F  V LA  +++  + A+K++ K  L+  G E  L  E+++      
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--- 65

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L   F D  +VYL++E    G ++  + +  
Sbjct: 66  ---------------------LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E+  +  I ++  A+ Y H 
Sbjct: 105 KFDEQRTATYITELANALSYCHS 127

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  123 bits (311), Expect = 3e-35
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 26/141 (18%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQS 87
            Y+L + LG G F +V++ E +  G   AVKI++++ ++  +    ++ EI+ L+ F   
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-- 69

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 HP+I++L +        ++VME V+GGELFD I + G 
Sbjct: 70  ----------------------HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR 107

Query: 148 YTEKDASMLIRQVLEAVDYMH 168
             E +A  L +Q+L AVDY H
Sbjct: 108 VEEMEARRLFQQILSAVDYCH 128

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  125 bits (315), Expect = 3e-35
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 26/140 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++Y   + +G+G F   RL   +    + AVK I++      +++++ EI   R      
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG--AAIDENVQREIINHRS----- 72

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HPNIV+  E       + ++ME  +GGEL++RI   G +
Sbjct: 73  -------------------LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF 113

Query: 149 TEKDASMLIRQVLEAVDYMH 168
           +E +A    +Q+L  V Y H
Sbjct: 114 SEDEARFFFQQLLSGVSYCH 133

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  122 bits (309), Expect = 7e-35
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 27/144 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQ 86
           E + +  LLG G+F+ V  AES   G   A+K+IDKKA+   G    ++NE+K+  +   
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ--- 67

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK- 145
                                L HP+I++L   FED + VYLV+E+   GE+   +  + 
Sbjct: 68  ---------------------LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV 106

Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
             ++E +A   + Q++  + Y+H 
Sbjct: 107 KPFSENEARHFMHQIITGMLYLHS 130

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  121 bits (307), Expect = 1e-34
 Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 26/143 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQ 86
           + + +   LG G F  V LA  ++N  + A+K++ K  L+  G E  L  EI++      
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--- 70

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI+++   F D+ ++YL++E    GEL+  + + G
Sbjct: 71  ---------------------LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG 109

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            + E+ ++  + ++ +A+ Y HE
Sbjct: 110 RFDEQRSATFMEELADALHYCHE 132

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  122 bits (307), Expect = 2e-34
 Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 29/146 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
             Y + + +G+G  S+V      E   ++A+K ++ +    +  DS  NEI  L +    
Sbjct: 28  RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK---- 82

Query: 88  VHNRLDETNDNNSNDKDKERLTHPN--IVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                               L   +  I++L +       +Y+VME     +L   + +K
Sbjct: 83  --------------------LQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK 121

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEAR 171
            S    +     + +LEAV  +H+  
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG 147

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  121 bits (305), Expect = 6e-34
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 25/141 (17%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQSV 88
            Y L + +G G F++V+LA     G   A+KIIDK  L       L  E+++++      
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI----- 70

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L HPNIV+L E  E +  +YL+ME  +GGE+FD +V  G  
Sbjct: 71  -------------------LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM 111

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
            EK+A    RQ++ AV Y H+
Sbjct: 112 KEKEARSKFRQIVSAVQYCHQ 132

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  124 bits (313), Expect = 7e-34
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 33/162 (20%)

Query: 17  GKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN 76
           G  +          + +KE LGTG F  V     ++ G   A+K   ++      +    
Sbjct: 2   GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 61

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV------YLVM 130
           EI++++                        +L HPN+V   E  +   K+       L M
Sbjct: 62  EIQIMK------------------------KLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97

Query: 131 ELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHE 169
           E   GG+L   + +  +     E     L+  +  A+ Y+HE
Sbjct: 98  EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  122 bits (308), Expect = 1e-33
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 26/154 (16%)

Query: 17  GKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--L 74
            +  +  G      YIL + LG G F +V++ +    G   AVKI++++ ++  +    +
Sbjct: 4   AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 63

Query: 75  ENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVT 134
             EI+ L+ F                         HP+I++L +       +++VME V+
Sbjct: 64  RREIQNLKLFR------------------------HPHIIKLYQVISTPSDIFMVMEYVS 99

Query: 135 GGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           GGELFD I + G   EK++  L +Q+L  VDY H
Sbjct: 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 133

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  118 bits (298), Expect = 6e-33
 Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 25/144 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
             Y + + +G+G  S+V    + E   ++A+K ++ +    +  DS  NEI  L +    
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ-- 65

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
             +                      I++L +       +Y+VME     +L   + +K S
Sbjct: 66  -QH-------------------SDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS 104

Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
               +     + +LEAV  +H+  
Sbjct: 105 IDPWERKSYWKNMLEAVHTIHQHG 128

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  117 bits (296), Expect = 1e-32
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 26/152 (17%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-----SLENE 77
              + E +Y L  LLG G F  V       +    A+K+I +  + G        +   E
Sbjct: 25  DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMEL-VTGG 136
           + +L +                          HP +++L++ FE +    LV+E  +   
Sbjct: 85  VALLWKVGAG--------------------GGHPGVIRLLDWFETQEGFMLVLERPLPAQ 124

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           +LFD I EKG   E  +     QV+ A+ + H
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  117 bits (296), Expect = 1e-32
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 32/147 (21%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-------LENEIKVLR 82
           KY     LG+GAF  V  A  +E      VK I K+ +             +  EI +L 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMEL-VTGGELFDR 141
           R                        + H NI+++++ FE++    LVME   +G +LF  
Sbjct: 85  R------------------------VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAF 120

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           I       E  AS + RQ++ AV Y+ 
Sbjct: 121 IDRHPRLDEPLASYIFRQLVSAVGYLR 147

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  117 bits (294), Expect = 6e-32
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 33/173 (19%)

Query: 2   PLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKI 61
           P  G  D  K      +   +KG      Y + + +G+G  S+V    + E   ++A+K 
Sbjct: 33  PDLGTDDDDKASSSANECISVKG----RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKY 87

Query: 62  IDKKALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN--IVQLIE 118
           ++ +    +  DS  NEI  L +                        L   +  I++L +
Sbjct: 88  VNLEEADNQTLDSYRNEIAYLNK------------------------LQQHSDKIIRLYD 123

Query: 119 TFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
                  +Y+VME     +L   + +K S    +     + +LEAV  +H+  
Sbjct: 124 YEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  115 bits (289), Expect = 6e-32
 Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +Y LK+ +G G++  V+LA +  + T +A+K++ KK L  +            R +    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG-- 71

Query: 90  NRLDETNDNNSNDKDKE------RLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDR 141
                       ++  +      +L HPN+V+L+E  +D  +  +Y+V ELV  G + + 
Sbjct: 72  ---GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME- 127

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMH 168
           +      +E  A    + +++ ++Y+H
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLH 154

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  115 bits (291), Expect = 8e-32
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 27/141 (19%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQS 87
            YI++E LG G+F +V+LA   +     A+K I ++ LK  +    +E EI  L+     
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-- 67

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 HP+I++L +       + +V+E   GGELFD IVEK  
Sbjct: 68  ----------------------HPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR 104

Query: 148 YTEKDASMLIRQVLEAVDYMH 168
            TE +     +Q++ A++Y H
Sbjct: 105 MTEDEGRRFFQQIICAIEYCH 125

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  113 bits (285), Expect = 4e-31
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 28/152 (18%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-----LENE 77
           +   +E +Y +  LLG+G F  V       +    A+K ++K  +    +      +  E
Sbjct: 37  EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-G 136
           + +L++                             +++L++ FE      L++E      
Sbjct: 97  VVLLKKV----------------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQ 134

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
           +LFD I E+G+  E+ A     QVLEAV + H
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCH 166

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  112 bits (282), Expect = 9e-31
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 32/146 (21%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQ 86
           KY++ +LLG G++ +V+     E     AVKI+ KK L+   +   N   EI++LR    
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR---- 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGG--ELFDRI 142
                               RL H N++QL++    E+K K+Y+VME    G  E+ D +
Sbjct: 62  --------------------RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV 101

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMH 168
            EK  +    A     Q+++ ++Y+H
Sbjct: 102 PEKR-FPVCQAHGYFCQLIDGLEYLH 126

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  112 bits (283), Expect = 1e-30
 Identities = 21/167 (12%), Positives = 51/167 (30%), Gaps = 50/167 (29%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK----------------GKED 72
             Y +   L  G F+++ L    ++   +A+K  +K  L+                 K D
Sbjct: 31  NDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 73  SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMEL 132
             +NE++++                          + +   +       +  +VY++ E 
Sbjct: 89  DFKNELQIITD------------------------IKNEYCLTCEGIITNYDEVYIIYEY 124

Query: 133 VTGGELFDRIVEKG--------SYTEKDASMLIRQVLEAVDYMHEAR 171
           +    +                    +    +I+ VL +  Y+H  +
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  107 bits (269), Expect = 4e-29
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 31/154 (20%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRR 83
           PS  E Y +   +GTG++   +    + +G +   K +D  ++   E   L +E+ +LR 
Sbjct: 2   PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR- 60

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDR 141
                                   L HPNIV+  +   D+    +Y+VME   GG+L   
Sbjct: 61  -----------------------ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV 97

Query: 142 IVE----KGSYTEKDASMLIRQVLEAVDYMHEAR 171
           I +    +    E+    ++ Q+  A+   H   
Sbjct: 98  ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  107 bits (269), Expect = 1e-28
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 27/148 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           EKY+  + +G G+F +  L +S E+G  + +K I+   +  KE +    E+ VL      
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN---- 79

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KG 146
                               + HPNIVQ  E+FE+   +Y+VM+   GG+LF RI   KG
Sbjct: 80  --------------------MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG 119

Query: 147 SY-TEKDASMLIRQVLEAVDYMHEARYL 173
               E        Q+  A+ ++H+ + L
Sbjct: 120 VLFQEDQILDWFVQICLALKHVHDRKIL 147

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  105 bits (263), Expect = 5e-28
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 26/166 (15%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
           + ++++ L+  G D        ++ +     LG G++ EV    S+E+G ++AVK     
Sbjct: 34  RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSP 93

Query: 66  ALKGKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
               K+      E+    +  Q                       HP  V+L + +E+  
Sbjct: 94  FRGPKDRARKLAEVGSHEKVGQ-----------------------HPCCVRLEQAWEEGG 130

Query: 125 KVYLVMELVTGGELFDRIVEKGSY-TEKDASMLIRQVLEAVDYMHE 169
            +YL  EL  G  L       G+   E      +R  L A+ ++H 
Sbjct: 131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  104 bits (261), Expect = 1e-27
 Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 33/154 (21%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
            + Y+  + LG G FS V L E   +G  +A+K I     + +E+  + E  + R F+  
Sbjct: 28  NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE-AQREADMHRLFN-- 84

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRI- 142
                                 HPNI++L+         KH+ +L++     G L++ I 
Sbjct: 85  ----------------------HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE 122

Query: 143 ---VEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
               +    TE     L+  +   ++ +H   Y 
Sbjct: 123 RLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  102 bits (255), Expect = 8e-27
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 30/169 (17%)

Query: 9   SAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK 68
              + +         G +    + +++ +G G FSEV  A    +G   A+K +    L 
Sbjct: 12  PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM 71

Query: 69  GKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKV 126
             +       EI +L++                        L HPN+++   +F + +++
Sbjct: 72  DAKARADCIKEIDLLKQ------------------------LNHPNVIKYYASFIEDNEL 107

Query: 127 YLVMELVTGGELFDRIVEKGSY----TEKDASMLIRQVLEAVDYMHEAR 171
            +V+EL   G+L   I           E+       Q+  A+++MH  R
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  100 bits (249), Expect = 1e-25
 Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 37/176 (21%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAV 59
              +   KL       E +     +   +  LLG GAF++V  A        +N   F +
Sbjct: 43  NTFEWQCKLPAIKPKTEFQL--GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVL 100

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           K+               E  +  +    +  RL  +                  ++    
Sbjct: 101 KVQKPANPW--------EFYIGTQ----LMERLKPSM-------------QHMFMKFYSA 135

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM-----LIRQVLEAVDYMHEA 170
              ++   LV EL + G L + I    +  EK            ++L  ++ +H+ 
Sbjct: 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC 191

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 97.4 bits (243), Expect = 4e-25
 Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 28/149 (18%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
               ++   E +G+G F  V     R +G ++A+K   K      +  +   E+      
Sbjct: 8   RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
            Q                       H ++V+    + +   + +  E   GG L D I E
Sbjct: 68  GQ-----------------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE 104

Query: 145 ----KGSYTEKDASMLIRQVLEAVDYMHE 169
                  + E +   L+ QV   + Y+H 
Sbjct: 105 NYRIMSYFKEAELKDLLLQVGRGLRYIHS 133

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 92.4 bits (230), Expect = 3e-23
 Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 39/156 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
             +   + LG G F  V  A+++ +   +A+K I     +   + +  E+K L       
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALA------ 58

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK------------VYLVMELVTGG 136
                             +L HP IV+    + +K+             +Y+ M+L    
Sbjct: 59  ------------------KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKE 100

Query: 137 ELFDRIVEKGSYTEKDASM---LIRQVLEAVDYMHE 169
            L D +  + +  E++ S+   +  Q+ EAV+++H 
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS 136

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 92.8 bits (230), Expect = 5e-23
 Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 11/150 (7%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQS 87
             +   +LG         A  +E G  F V +              ++ E+  LR     
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 88  VHNRLDETNDNNSNDKDKERLT-HPNIVQLIETFEDKH--KVYLVMELVT------GGEL 138
            + +  + +       D  +      ++++     D      + +   +       G  L
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMH 168
                   S        L  QV+  +  +H
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLH 223

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 90.8 bits (226), Expect = 1e-22
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 47/167 (28%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
                 +   EL+G+G F +V  A+ R +G  + +K +         +  E E+K L   
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY-----NNEKAEREVKALA-- 59

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----------------KHKVYL 128
                                 +L H NIV     ++                    +++
Sbjct: 60  ----------------------KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFI 97

Query: 129 VMELVTGGELFDRIVEKGSY--TEKDASMLIRQVLEAVDYMHEARYL 173
            ME    G L   I ++      +  A  L  Q+ + VDY+H  + +
Sbjct: 98  QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLI 144

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 91.0 bits (226), Expect = 2e-22
 Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 30/142 (21%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
                 +  +G G+F EV   + ++ G   AVK +        E     E+         
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAG---- 106

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L+ P IV L     +   V + MEL+ GG L   I + G 
Sbjct: 107 --------------------LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC 146

Query: 148 YTEKDASMLIRQVLEAVDYMHE 169
             E  A   + Q LE ++Y+H 
Sbjct: 147 LPEDRALYYLGQALEGLEYLHT 168

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 90.6 bits (225), Expect = 3e-22
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 34/154 (22%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           E +  ++ +L  G F+ V  A+   +G  +A+K +     + K  ++  E+  +++ S  
Sbjct: 27  ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE-KNRAIIQEVCFMKKLSG- 84

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLI-------ETFEDKHKVYLVMELVTGGELFD 140
                                 HPNIVQ         E  +     +L++  +  G+L +
Sbjct: 85  ----------------------HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122

Query: 141 RIVE---KGSYTEKDASMLIRQVLEAVDYMHEAR 171
            + +   +G  +      +  Q   AV +MH  +
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK 156

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 90.0 bits (224), Expect = 3e-22
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 26/141 (18%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSV 88
           +   ++LG G+FS V LA        +A+KI++K+ +  + K   +  E  V+       
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM------- 84

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                             RL HP  V+L  TF+D  K+Y  +     GEL   I + GS+
Sbjct: 85  -----------------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
            E        +++ A++Y+H 
Sbjct: 128 DETCTRFYTAEIVSALEYLHG 148

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 87.4 bits (216), Expect = 5e-21
 Identities = 24/152 (15%), Positives = 39/152 (25%), Gaps = 10/152 (6%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQS 87
           K  L E L  G  S V L    E    FA+K+    A     + + L        R    
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTG-----GELFD 140
                 +              + P   QL    +D       L+M   +          D
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 141 RIVEKGSYTEKDASMLI-RQVLEAVDYMHEAR 171
            +          A  ++  Q++     +    
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKG 214

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 85.8 bits (213), Expect = 9e-21
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 28/157 (17%)

Query: 16  DGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE 75
           D + + ++     ++   + +LG G +  V       N    A+K I ++  +     L 
Sbjct: 9   DCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-YSQPLH 67

Query: 76  NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG 135
            EI + +                         L H NIVQ + +F +   + + ME V G
Sbjct: 68  EEIALHKH------------------------LKHKNIVQYLGSFSENGFIKIFMEQVPG 103

Query: 136 GELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHE 169
           G L   +  K       E+      +Q+LE + Y+H+
Sbjct: 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 83.9 bits (208), Expect = 3e-20
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 30/170 (17%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYI-LKELLGTGAFSEVRLAESRENGTMFAVKII-D 63
           ++ + ++   +  + +  G S + +++     +G G+F  V      E     A   + D
Sbjct: 2   EERNQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD 61

Query: 64  KKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED- 122
           +K  K +    + E ++L+                         L HPNIV+  +++E  
Sbjct: 62  RKLTKSERQRFKEEAEMLKG------------------------LQHPNIVRFYDSWEST 97

Query: 123 ---KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
              K  + LV EL+T G L   +        K      RQ+L+ + ++H 
Sbjct: 98  VKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 84.6 bits (209), Expect = 1e-19
 Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)

Query: 18  KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLE 75
           K+ E+        + +  ++G G F EV      + G M+A+K +DKK +K K  E    
Sbjct: 178 KNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL 237

Query: 76  NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG 135
           NE  +L   S                         P IV +   F    K+  +++L+ G
Sbjct: 238 NERIMLSLVSTG---------------------DCPFIVCMSYAFHTPDKLSFILDLMNG 276

Query: 136 GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           G+L   + + G ++E D      +++  +++MH 
Sbjct: 277 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 82.7 bits (205), Expect = 2e-19
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA-LKGKE-DSLENEIKVLRRFSQ 86
           +++   + LGTG+F  V L + +E+G  +A+KI+DK+  +K K+ +   NE ++L     
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRIL----- 95

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                              + +  P +V+L  +F+D   +Y+VME V GGE+F  +   G
Sbjct: 96  -------------------QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG 136

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            ++E  A     Q++   +Y+H 
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHS 159

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 26/141 (18%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA-LKGKE-DSLENEIKVLRRFSQSV 88
           + +   LGTG+F  V L  SR NG  +A+K++ K+  ++ K+ +   +E  +L       
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML------- 60

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              +THP I+++  TF+D  +++++M+ + GGELF  + +   +
Sbjct: 61  -----------------SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF 103

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
               A     +V  A++Y+H 
Sbjct: 104 PNPVAKFYAAEVCLALEYLHS 124

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 82.8 bits (205), Expect = 2e-19
 Identities = 29/141 (20%), Positives = 70/141 (49%), Gaps = 29/141 (20%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSV 88
           IL+  +G G+F +V + +  +   M+A+K ++K+    + + + N   E++++       
Sbjct: 19  ILR-AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIM------- 69

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                            + L HP +V L  +F+D+  +++V++L+ GG+L   + +   +
Sbjct: 70  -----------------QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHF 112

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
            E+   + I +++ A+DY+  
Sbjct: 113 KEETVKLFICELVMALDYLQN 133

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 82.8 bits (204), Expect = 3e-19
 Identities = 18/154 (11%), Positives = 41/154 (26%), Gaps = 11/154 (7%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSV 88
            +   +LG         A  +E G  F V +              ++ E+  LR      
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 89  HNRLDETNDNNSNDKDKERLT-HPNIVQLIETFEDK--HKVYLVMELVTG------GELF 139
           + +  + +       D  +      ++++     D      + +   +          L 
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                  S        L  QV+  +  +H    +
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV 233

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 80.8 bits (200), Expect = 6e-19
 Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 27/164 (16%)

Query: 8   DSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL 67
            S  +    G  N    P  EE +   E +G G+F EV          + A+KIID +  
Sbjct: 3   HSPVQSGLPGMQNLKADP--EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA 60

Query: 68  KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVY 127
           + + + ++ EI VL                         +   P + +   ++    K++
Sbjct: 61  EDEIEDIQQEITVLS------------------------QCDSPYVTKYYGSYLKDTKLW 96

Query: 128 LVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           ++ME + GG   D ++E G   E   + ++R++L+ +DY+H  +
Sbjct: 97  IIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 139

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 78.2 bits (193), Expect = 6e-18
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 26/144 (18%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
                    +G G+   V LA  + +G   AVK++D +  + + + L NE+ ++R +   
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQ-- 100

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 H N+V++ +++    +++++ME + GG L D IV +  
Sbjct: 101 ----------------------HFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVR 137

Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E+  + +   VL+A+ Y+H   
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQG 161

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 78.6 bits (194), Expect = 9e-18
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 27/139 (19%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHN 90
           + +++G GAF EV+L   +    ++A+K++ K  +  + DS     E  ++         
Sbjct: 73  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM--------- 123

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                               P +VQL   F+D   +Y+VME + GG+L   ++      E
Sbjct: 124 ---------------AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPE 167

Query: 151 KDASMLIRQVLEAVDYMHE 169
           K A     +V+ A+D +H 
Sbjct: 168 KWARFYTAEVVLALDAIHS 186

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 77.5 bits (191), Expect = 2e-17
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 28/138 (20%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLD 93
           +LG G F EV   + R  G M+A K ++KK +K +  E    NE ++L            
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL------------ 238

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI--VEKGSYTEK 151
                       E++    +V L   +E K  + LV+ L+ GG+L   I  + +  + E 
Sbjct: 239 ------------EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286

Query: 152 DASMLIRQVLEAVDYMHE 169
            A     ++   ++ +H 
Sbjct: 287 RAVFYAAEICCGLEDLHR 304

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 76.6 bits (189), Expect = 2e-17
 Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 26/144 (18%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++KY   E +G GA   V  A     G   A++ ++ +  + K++ + NEI V+R     
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENK-- 75

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                 +PNIV  ++++    ++++VME + GG L D +V +  
Sbjct: 76  ----------------------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC 112

Query: 148 YTEKDASMLIRQVLEAVDYMHEAR 171
             E   + + R+ L+A++++H  +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQ 136

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 76.8 bits (189), Expect = 2e-17
 Identities = 25/182 (13%), Positives = 62/182 (34%), Gaps = 36/182 (19%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
              +   + +G G F  V  A+++ +   +A+K I     +   + +  E+K L +    
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 64

Query: 88  ---------------------------------VHNRLDETNDNNSNDKDKERLTHPNIV 114
                                              +     +  +   +  +  +  N V
Sbjct: 65  GIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124

Query: 115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASM---LIRQVLEAVDYMHEAR 171
             ++    K  +Y+ M+L     L D +  + S  +++  +   +  Q+ EAV+++H   
Sbjct: 125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG 184

Query: 172 YL 173
            +
Sbjct: 185 LM 186

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 76.2 bits (188), Expect = 3e-17
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 32/157 (20%)

Query: 21  EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV 80
            +      + Y L+E++G+GA + V+ A         A+K I+ +  +   D L  EI+ 
Sbjct: 7   ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 66

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           +                         +  HPNIV    +F  K +++LVM+L++GG + D
Sbjct: 67  MS------------------------QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102

Query: 141 --------RIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
                      + G   E   + ++R+VLE ++Y+H+
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 76.2 bits (188), Expect = 3e-17
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 27/161 (16%)

Query: 13  LKKDGKDNEIKGPS-IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE 71
           ++K  +   ++      E + +   LG GAF +V  A+++E G + A K+I+ K+ +  E
Sbjct: 2   MRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE 61

Query: 72  DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVME 131
           D    EI++L                            HP IV+L+  +    K+++++E
Sbjct: 62  D-YIVEIEILA------------------------TCDHPYIVKLLGAYYHDGKLWIMIE 96

Query: 132 LVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEAR 171
              GG +   ++E     TE    ++ RQ+LEA++++H  R
Sbjct: 97  FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 76.5 bits (189), Expect = 3e-17
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 27/140 (19%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVH 89
            LK LLG G F +V L   +  G  +A+KI+ K+ +  K++      E +VL        
Sbjct: 9   YLK-LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-------- 59

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                           +   HP +  L   F+   ++  VME   GGELF  +  +  +T
Sbjct: 60  ----------------QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT 103

Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E+ A     +++ A++Y+H 
Sbjct: 104 EERARFYGAEIVSALEYLHS 123

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 76.5 bits (189), Expect = 4e-17
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLD 93
           +LG G+F +V LAE ++    FA+K + K  +   +D      E +VL    +       
Sbjct: 24  MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE------- 76

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                           HP +  +  TF+ K  ++ VME + GG+L   I     +    A
Sbjct: 77  ----------------HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 120

Query: 154 SMLIRQVLEAVDYMHE 169
           +    +++  + ++H 
Sbjct: 121 TFYAAEIILGLQFLHS 136

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 77.1 bits (190), Expect = 4e-17
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 30/140 (21%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLD 93
           +LG G F EV   + +  G ++A K ++KK LK ++       E K+L            
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL------------ 239

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS----YT 149
                        ++    IV L   FE K  + LVM ++ GG++   I         + 
Sbjct: 240 ------------AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287

Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E  A     Q++  ++++H+
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQ 307

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLD 93
           +LG G+F +V L+E +    ++AVKI+ K  +   +D      E +VL    +       
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK------- 400

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                            P + QL   F+   ++Y VME V GG+L   I + G + E  A
Sbjct: 401 ----------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 444

Query: 154 SMLIRQVLEAVDYMHE 169
                ++   + ++  
Sbjct: 445 VFYAAEIAIGLFFLQS 460

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 75.3 bits (186), Expect = 6e-17
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 28/150 (18%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           G  I E+Y + + LG G  S V LAE        A+K I              + + L+R
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF--------IPPREKEETLKR 57

Query: 84  F---SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           F     +                   +L+H NIV +I+  E+    YLVME + G  L +
Sbjct: 58  FEREVHNS-----------------SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSE 100

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
            I   G  +   A     Q+L+ + + H+ 
Sbjct: 101 YIESHGPLSVDTAINFTNQILDGIKHAHDM 130

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 30/167 (17%), Positives = 74/167 (44%), Gaps = 26/167 (15%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
           G ++  + +             +++  +L+ ++G G++++V L   ++   ++A++++ K
Sbjct: 29  GIEEEKEAMNTRESGKASSSLGLQDFDLLR-VIGRGSYAKVLLVRLKKTDRIYAMRVVKK 87

Query: 65  KALKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED 122
           + +   ED   ++ E  V  + S                        HP +V L   F+ 
Sbjct: 88  ELVNDDEDIDWVQTEKHVFEQASN-----------------------HPFLVGLHSCFQT 124

Query: 123 KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           + +++ V+E V GG+L   +  +    E+ A     ++  A++Y+HE
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 28/141 (19%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVH 89
           ILK ++G GAFSEV + + ++ G ++A+KI++K  +  + +      E  VL        
Sbjct: 65  ILK-VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-------- 115

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-Y 148
                                  I QL   F+D++ +YLVME   GG+L   + + G   
Sbjct: 116 ----------------VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI 159

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
             + A   + +++ A+D +H 
Sbjct: 160 PAEMARFYLAEIVMAIDSVHR 180

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 27/169 (15%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
              +S  +  +          ++ E   LK LLG G F +V L + +  G  +A+KI+ K
Sbjct: 125 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLK-LLGKGTFGKVILVKEKATGRYYAMKILKK 183

Query: 65  KALKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED 122
           + +  K++      E +VL                        +   HP +  L  +F+ 
Sbjct: 184 EVIVAKDEVAHTLTENRVL------------------------QNSRHPFLTALKYSFQT 219

Query: 123 KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
             ++  VME   GGELF  +  +  ++E  A     +++ A+DY+H  +
Sbjct: 220 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 27/167 (16%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
           G K+S+K+    G  N      I+    ++ +LG G+F +V LA  +E G ++AVK++ K
Sbjct: 1   GPKESSKEGNGIGV-NSSNRLGIDNFEFIR-VLGKGSFGKVMLARVKETGDLYAVKVLKK 58

Query: 65  KALKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED 122
             +   +D      E ++L                            HP + QL   F+ 
Sbjct: 59  DVILQDDDVECTMTEKRILSLARN-----------------------HPFLTQLFCCFQT 95

Query: 123 KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
             +++ VME V GG+L   I +   + E  A     +++ A+ ++H+
Sbjct: 96  PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLD 93
           ++G G++++V L   ++   ++A+K++ K+ +   ED   ++ E  V  + S        
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN------- 68

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                           HP +V L   F+ + +++ V+E V GG+L   +  +    E+ A
Sbjct: 69  ----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 112

Query: 154 SMLIRQVLEAVDYMHE 169
                ++  A++Y+HE
Sbjct: 113 RFYSAEISLALNYLHE 128

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 30/167 (17%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
           +    ++LKK  +D+  K P  EE + + E LG G++  V  A  +E G + A+K +   
Sbjct: 8   RNPPRRQLKKLDEDSLTKQP--EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-- 63

Query: 66  ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK 125
            ++     +  EI +++                        +   P++V+   ++     
Sbjct: 64  -VESDLQEIIKEISIMQ------------------------QCDSPHVVKYYGSYFKNTD 98

Query: 126 VYLVMELVTGGELFDRI-VEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           +++VME    G + D I +   + TE + + +++  L+ ++Y+H  R
Sbjct: 99  LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 26/140 (18%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVH 89
            LK ++G G+F +V LA  +     +AVK++ KKA+  K++   + +E  VL +  +   
Sbjct: 42  FLK-VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK--- 97

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                               HP +V L  +F+   K+Y V++ + GGELF  +  +  + 
Sbjct: 98  --------------------HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL 137

Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E  A     ++  A+ Y+H 
Sbjct: 138 EPRARFYAAEIASALGYLHS 157

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 74.8 bits (184), Expect = 2e-16
 Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 27/140 (19%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS--LENEIKVLRRFSQSVHN 90
           + +++G GAF EV + + +    +FA+KI++K  +  + ++     E  VL         
Sbjct: 78  ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--------- 128

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYT 149
                                 I  L   F+D + +YLVM+   GG+L   +   +    
Sbjct: 129 ---------------VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP 173

Query: 150 EKDASMLIRQVLEAVDYMHE 169
           E+ A   + +++ A+D +H+
Sbjct: 174 EEMARFYLAEMVIAIDSVHQ 193

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 74.6 bits (183), Expect = 2e-16
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 29/154 (18%)

Query: 25  PSIEEKYILKELLGTGA--FSEVRLAESRENGTMFAVKIID-KKALKGKEDSLENEIKVL 81
                 Y L  ++G G      V LA  +  G    V+ I+ +         L+ E+ V 
Sbjct: 21  LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVS 80

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD- 140
           + F+                        HPNIV    TF   +++++V   +  G   D 
Sbjct: 81  KLFN------------------------HPNIVPYRATFIADNELWVVTSFMAYGSAKDL 116

Query: 141 -RIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                     E   + +++ VL+A+DY+H   Y+
Sbjct: 117 ICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 73.8 bits (182), Expect = 3e-16
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 25/136 (18%)

Query: 36  LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLD 93
           +LG G+F +V L+E +    ++AVKI+ K  +   +D      E +VL    +       
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK------- 79

Query: 94  ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDA 153
                            P + QL   F+   ++Y VME V GG+L   I + G + E  A
Sbjct: 80  ----------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 123

Query: 154 SMLIRQVLEAVDYMHE 169
                ++   + ++  
Sbjct: 124 VFYAAEIAIGLFFLQS 139

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 73.6 bits (181), Expect = 3e-16
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 32/175 (18%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSI------EEKYILKELLGTGAFSEVRLAESRENGTMFA 58
           G  D      + G   +     +      E+ +     +G G+F  V  A    N  + A
Sbjct: 24  GAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVA 83

Query: 59  VKIIDKKALKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQL 116
           +K +     +  E    +  E++ L++                        L HPN +Q 
Sbjct: 84  IKKMSYSGKQSNEKWQDIIKEVRFLQK------------------------LRHPNTIQY 119

Query: 117 IETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
              +  +H  +LVME   G       V K    E + + +    L+ + Y+H   
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 72.7 bits (179), Expect = 6e-16
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 28/143 (19%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF---SQS 87
           Y L+ L+G G   +V  AE      + A+K++         ++L ++     R    +++
Sbjct: 36  YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMS--------ETLSSDPVFRTRMQREART 87

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                              RL  P++V + +  E   ++Y+ M L+ G +L   +  +G 
Sbjct: 88  A-----------------GRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP 130

Query: 148 YTEKDASMLIRQVLEAVDYMHEA 170
                A  ++RQ+  A+D  H A
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAA 153

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 72.2 bits (178), Expect = 1e-15
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 31/144 (21%)

Query: 32  ILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFS 85
           +L+ +LG G + +V           G +FA+K++ K  +        +   E  +L    
Sbjct: 21  LLR-VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL---- 75

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                               E + HP IV LI  F+   K+YL++E ++GGELF ++  +
Sbjct: 76  --------------------EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115

Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
           G + E  A   + ++  A+ ++H+
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQ 139

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 30/153 (19%), Positives = 64/153 (41%), Gaps = 35/153 (22%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDS-LENEIKVLRRFSQ 86
              + L EL+G G + +V      + G + A+K++D   + G E+  ++ EI +L+++S 
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSH 79

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVMELVTGGELFD 140
                                  H NI      F          +++LVME    G + D
Sbjct: 80  -----------------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116

Query: 141 --RIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
             +  +  +  E+  + + R++L  + ++H+ +
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 70.0 bits (172), Expect = 6e-15
 Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 30/144 (20%)

Query: 32  ILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLE---NEIKVLRRFS 85
           +LK +LGTGA+ +V L       + G ++A+K++ K  +  K  + E    E +VL    
Sbjct: 58  LLK-VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 116

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
           Q                        P +V L   F+ + K++L+++ + GGELF  + ++
Sbjct: 117 Q-----------------------SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR 153

Query: 146 GSYTEKDASMLIRQVLEAVDYMHE 169
             +TE +  + + +++ A++++H+
Sbjct: 154 ERFTEHEVQIYVGEIVLALEHLHK 177

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 69.9 bits (171), Expect = 1e-14
 Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 32/153 (20%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAE-SRENGTMFAVKIIDKKALKGKEDSLENEIKVLR 82
           G  +  +Y +K  +  G    + LA     NG    +K      L    D       +  
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG-----LVHSGD--AEAQAMAM 127

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED-----KHKVYLVMELVTGGE 137
              Q +                   + HP+IVQ+    E          Y+VME V G  
Sbjct: 128 AERQFL-----------------AEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQS 170

Query: 138 LFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           L     +K    E  A   + ++L A+ Y+H  
Sbjct: 171 LKRSKGQKLPVAE--AIAYLLEILPALSYLHSI 201

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.1 bits (169), Expect = 1e-14
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 28/166 (16%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
           +K     L +  K  E+K    ++ +     LG G    V     + +G + A K+I  +
Sbjct: 14  RKRLEAFLTQKQKVGELK----DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE 69

Query: 66  ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK 125
                 + +  E++VL   +                         P IV     F    +
Sbjct: 70  IKPAIRNQIIRELQVLHECN------------------------SPYIVGFYGAFYSDGE 105

Query: 126 VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           + + ME + GG L   + + G   E+    +   V++ + Y+ E  
Sbjct: 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 68.7 bits (169), Expect = 2e-14
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 27/141 (19%)

Query: 32  ILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           +LK +LG G+F +V L +     +   ++A+K++ K  LK ++       K+ R     V
Sbjct: 28  LLK-VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD---RVRTKMERDILVEV 83

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
           +                    HP IV+L   F+ + K+YL+++ + GG+LF R+ ++  +
Sbjct: 84  N--------------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           TE+D    + ++  A+D++H 
Sbjct: 124 TEEDVKFYLAELALALDHLHS 144

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 32/154 (20%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
              + ++Y L E+LG G  SEV LA    +    AVK++           L  +     R
Sbjct: 7   PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLR--------ADLARDPSFYLR 58

Query: 84  F---SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGG 136
           F   +Q+                    L HP IV + +T E         Y+VME V G 
Sbjct: 59  FRREAQNA-----------------AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGV 101

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
            L D +  +G  T K A  +I    +A+++ H+ 
Sbjct: 102 TLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 135

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 24/140 (17%)

Query: 31  YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHN 90
           Y L    G     +   A         A+  +D          +  +  VL+        
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVD-------PQGVLPD-DVLQET------ 78

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
            L  T           R+  P + ++++    +    +V E + GG L +      S + 
Sbjct: 79  -LSRT-------LRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSP 128

Query: 151 KDASMLIRQVLEAVDYMHEA 170
             A   ++ +  A D  H A
Sbjct: 129 VGAIRAMQSLAAAADAAHRA 148

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 65.5 bits (160), Expect = 2e-13
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 23/167 (13%)

Query: 5   GKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
           G   S+ K          +  +          +G+G   +V     R+ G + AVK + +
Sbjct: 1   GSSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR 60

Query: 65  KALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
              K +   +  ++ V+ +                           P IVQ   TF    
Sbjct: 61  SGNKEENKRILMDLDVVLKSHD-----------------------CPYIVQCFGTFITNT 97

Query: 125 KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
            V++ MEL+       +   +G   E+    +   +++A+ Y+ E  
Sbjct: 98  DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 37/152 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-----EIKVLRR 83
           EKY     +G G++  V    +R+ G + A+K    K L+ ++D +       EI++L++
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLKQ 58

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG--GELFDR 141
                                   L HPN+V L+E F  K +++LV E          DR
Sbjct: 59  ------------------------LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR 94

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
              +    E     +  Q L+AV++ H+   +
Sbjct: 95  Y--QRGVPEHLVKSITWQTLQAVNFCHKHNCI 124

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 32/174 (18%), Positives = 70/174 (40%), Gaps = 30/174 (17%)

Query: 6   KKDSAKKLKKDGKDNE------IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAV 59
              S ++      D+E       KG  +   +++   +G G F  V L +  +N   +AV
Sbjct: 6   HHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAV 65

Query: 60  KIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET 119
           K++  + +K    S + E  +L++                ++D +       NIV+    
Sbjct: 66  KVV--RNIKKYTRSAKIEADILKKI--------------QNDDINNN-----NIVKYHGK 104

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEAR 171
           F     + L+ E + G  L++ I       +  +D  +   ++L+A++Y+ +  
Sbjct: 105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS 157

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.5 bits (150), Expect = 7e-12
 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 25/146 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E  +L E +G G F EV     R + T+ AVK   +      +     E ++L+++S   
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--- 170

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                                HPNIV+LI     K  +Y+VMELV GG+    +  +G+ 
Sbjct: 171 ---------------------HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR 209

Query: 149 -TEKDASMLIRQVLEAVDYMHEARYL 173
              K    ++      ++Y+     +
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCI 235

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           +       LG GA+  V       +G + AVK I       ++  L  ++ +  R     
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-- 64

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG--ELFDRIVEK- 145
                                 P  V        +  V++ MEL+     + + ++++K 
Sbjct: 65  ---------------------CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG 103

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEAR 171
            +  E     +   +++A++++H   
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKL 129

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 37/152 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-----EIKVLRR 83
           EKY    L+G G++  V    +++ G + A+K    K L+  +D +       EIK+L++
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK----KFLESDDDKMVKKIAMREIKLLKQ 80

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG--GELFDR 141
                                   L H N+V L+E  + K + YLV E V     +  + 
Sbjct: 81  ------------------------LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL 116

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                    +     + Q++  + + H    +
Sbjct: 117 F--PNGLDYQVVQKYLFQIINGIGFCHSHNII 146

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 59.4 bits (144), Expect = 4e-11
 Identities = 28/173 (16%), Positives = 69/173 (39%), Gaps = 18/173 (10%)

Query: 6   KKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKK 65
             ++         + ++       +++L + +G+G F  + LA         A  ++  K
Sbjct: 14  GTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV--K 71

Query: 66  ALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETF 120
               +   L +E+K  +R ++          D      ++++L +  I         E  
Sbjct: 72  VEYQENGPLFSELKFYQRVAKK---------DCIKKWIERKQLDYLGIPLFYGSGLTEFK 122

Query: 121 EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
              ++  +VME + G +L     + G++ +     L  ++L+ ++Y+HE  Y+
Sbjct: 123 GRSYRF-MVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYV 173

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 58.9 bits (143), Expect = 5e-11
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 31/149 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E       +G GA+  V     + +G + AVK I     + ++  L  ++ V+ R S   
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD-- 79

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--- 145
                                 P IVQ       +   ++ MEL++    FD+  +    
Sbjct: 80  ---------------------CPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYS 116

Query: 146 ---GSYTEKDASMLIRQVLEAVDYMHEAR 171
                  E+    +    ++A++++ E  
Sbjct: 117 VLDDVIPEEILGKITLATVKALNHLKENL 145

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 58.6 bits (142), Expect = 8e-11
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 40/183 (21%)

Query: 1   MPLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK 60
           M +   KD +K         +      E  Y   +++G G+F  V  A+  ++G + A+ 
Sbjct: 26  MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAI- 84

Query: 61  IIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF 120
              KK L+ K      E++++R+                          H NIV+L   F
Sbjct: 85  ---KKVLQDKRFKNR-ELQIMRKLD------------------------HCNIVRLRYFF 116

Query: 121 ------EDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIR----QVLEAVDYMHEA 170
                 +D+  + LV++ V    ++          +    + ++    Q+  ++ Y+H  
Sbjct: 117 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175

Query: 171 RYL 173
              
Sbjct: 176 GIC 178

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 32/158 (20%)

Query: 22  IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----E 77
           +   S  ++Y   + LG G F+ V  A  +    + A+K I        +D +      E
Sbjct: 3   LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-- 135
           IK+L+                         L+HPNI+ L++ F  K  + LV + +    
Sbjct: 63  IKLLQE------------------------LSHPNIIGLLDAFGHKSNISLVFDFMETDL 98

Query: 136 GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
             +          T       +   L+ ++Y+H+   L
Sbjct: 99  EVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 29/165 (17%), Positives = 66/165 (40%), Gaps = 31/165 (18%)

Query: 16  DGKDNE------IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG 69
            G D++      +    +  +Y + +++G G+F +V  A   +     A+K++  +  K 
Sbjct: 78  GGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV--RNEKR 135

Query: 70  KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLV 129
                  EI++L                    DKD       N++ ++E F  ++ + + 
Sbjct: 136 FHRQAAEEIRILEHL--------------RKQDKDNTM----NVIHMLENFTFRNHICMT 177

Query: 130 MELVTGGELFDRIVEKGSY---TEKDASMLIRQVLEAVDYMHEAR 171
            EL+    L++ I +K  +   +          +L+ +D +H+ R
Sbjct: 178 FELL-SMNLYELI-KKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 33/143 (23%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE------NEIKVLRRFSQ 86
            ++ +G G F  V      ++ ++ A+K +     +G+ + +E       E+ ++     
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS---- 78

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNIV+L     +     +VME V  G+L+ R+++K 
Sbjct: 79  --------------------NLNHPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKA 116

Query: 147 -SYTEKDASMLIRQVLEAVDYMH 168
                     L+  +   ++YM 
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQ 139

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 33/154 (21%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
            EE+++   + LG G F  V +          G + AVK +     +   D    EI++L
Sbjct: 38  FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEIL 96

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGELF 139
           +                           H NIV+         +  + L+ME +  G L 
Sbjct: 97  KSLQ------------------------HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132

Query: 140 DRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           D + + K             Q+ + ++Y+   RY
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 28/146 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
               +K  LG G + EV     ++     AVK + K+     E+ L+ E  V++      
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLK-EAAVMKEIK--- 274

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKG 146
                                HPN+VQL+     +   Y++ E +T G L D  R   + 
Sbjct: 275 ---------------------HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
             +      +  Q+  A++Y+ +  +
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNF 339

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 33/154 (21%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
            EE+++   + LG G F  V +          G + AVK +     +   D    EI++L
Sbjct: 7   FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEIL 65

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGELF 139
           +                           H NIV+         +  + L+ME +  G L 
Sbjct: 66  KSLQ------------------------HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101

Query: 140 DRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           D + + K             Q+ + ++Y+   RY
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 29/169 (17%)

Query: 11  KKLKKDGKDNE------IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
           +K+  DG D++        G    ++Y +  L+G G+F +V  A  R      A+KII  
Sbjct: 30  RKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-- 87

Query: 65  KALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
           K  K   +  + E+++L                 N +D + +      IV L   F  ++
Sbjct: 88  KNKKAFLNQAQIEVRLLELM--------------NKHDTEMKY----YIVHLKRHFMFRN 129

Query: 125 KVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEAR 171
            + LV E++    L+D +        +        +Q+  A+ ++    
Sbjct: 130 HLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 40/151 (26%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKII----DKKALKGKEDSLENEIKVLR 82
            ++ Y L   LG G +SEV  A +  N     VKI+     KK  +        EIK+L 
Sbjct: 34  NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR--------EIKILE 85

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFD 140
                                       PNI+ L +  +D       LV E V   + F 
Sbjct: 86  NLRG-----------------------GPNIITLADIVKDPVSRTPALVFEHVNNTD-FK 121

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
           ++ +    T+ D    + ++L+A+DY H   
Sbjct: 122 QLYQT--LTDYDIRFYMYEILKALDYCHSMG 150

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 24/149 (16%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
            + +YIL   LG G FS V LA+   N T  A+KI+  +  K   ++ E+EIK+L+R   
Sbjct: 17  KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV--RGDKVYTEAAEDEIKLLQRV-- 72

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFE-----DKHKVYLVMELVTGGELFDR 141
                      N++++  ++ +   +I++L++ F        H V +V E++ G  L   
Sbjct: 73  -----------NDADNTKEDSMGANHILKLLDHFNHKGPNGVH-VVMVFEVL-GENLLAL 119

Query: 142 IVEKGS--YTEKDASMLIRQVLEAVDYMH 168
           I +             + +Q+L  +DYMH
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMH 148

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 34/166 (20%)

Query: 7   KDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA 66
           ++   +   DG D +I    +     +KE +G G+F  V  AE    G+  AVKI+ ++ 
Sbjct: 19  ENLYFQGAMDGDDMDIPWCDLN----IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQD 72

Query: 67  LKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK 125
              +  +    E+ +++R                        L HPNIV  +        
Sbjct: 73  FHAERVNEFLREVAIMKR------------------------LRHPNIVLFMGAVTQPPN 108

Query: 126 VYLVMELVTGGELFDRIVEKGSYTEKDASMLIR---QVLEAVDYMH 168
           + +V E ++ G L+  + + G+  + D    +     V + ++Y+H
Sbjct: 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 34/143 (23%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++  ++E++G GAF  V  A+ R      A+K I+ ++      +   E++ L R     
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESE---RKAFIVELRQLSR----- 57

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              + HPNIV+L       + V LVME   GG L++ +      
Sbjct: 58  -------------------VNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPL 96

Query: 149 TEKDASMLIR---QVLEAVDYMH 168
               A+  +    Q  + V Y+H
Sbjct: 97  PYYTAAHAMSWCLQCSQGVAYLH 119

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 32/153 (20%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
             ++Y+     LG G F +V L      +   G M AVK +   A        + EI +L
Sbjct: 28  FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGELF 139
           R                           H +I++            + LVME V  G L 
Sbjct: 88  RTLY------------------------HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
           D +  + S       +  +Q+ E + Y+H   Y
Sbjct: 124 DYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHY 155

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 56.8 bits (137), Expect = 4e-10
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 27/152 (17%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           G     +Y +   LG G FS V L+   +     A+K++  K+ +   ++  +EI++L+ 
Sbjct: 32  GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV--KSAEHYTETALDEIRLLKS 89

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFE-----DKHKVYLVMELVTGGEL 138
              S                D        +VQL++ F+       H   +V E V G  L
Sbjct: 90  VRNS----------------DPNDPNREMVVQLLDDFKISGVNGTHIC-MVFE-VLGHHL 131

Query: 139 FD--RIVEKGSYTEKDASMLIRQVLEAVDYMH 168
                              +I+QVL+ +DY+H
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 163

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 55.8 bits (135), Expect = 6e-10
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 33/154 (21%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
            EE+++     LG G F  V L          G + AVK +       + D    EI++L
Sbjct: 20  FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQIL 78

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGELF 139
           +                              IV+         +  + LVME +  G L 
Sbjct: 79  KALH------------------------SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114

Query: 140 DRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           D +   +         +   Q+ + ++Y+   R 
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 55.8 bits (135), Expect = 6e-10
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 32/154 (20%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
            E++++     LG G F +V L          G   AVK +  ++       L+ EI++L
Sbjct: 18  FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGELF 139
           R                           H NIV+     T +  + + L+ME +  G L 
Sbjct: 78  RNLY------------------------HENIVKYKGICTEDGGNGIKLIMEFLPSGSLK 113

Query: 140 DRI-VEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
           + +   K     K       Q+ + +DY+   +Y
Sbjct: 114 EYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 147

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.8 bits (135), Expect = 6e-10
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 26/142 (18%)

Query: 32  ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNR 91
           I  E+LG G F +      RE G +  +K + +   + +   L+ E+KV+R         
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK-EVKVMRCLE------ 65

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGSYTE 150
                             HPN+++ I       ++  + E + GG L   I      Y  
Sbjct: 66  ------------------HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPW 107

Query: 151 KDASMLIRQVLEAVDYMHEARY 172
                  + +   + Y+H    
Sbjct: 108 SQRVSFAKDIASGMAYLHSMNI 129

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 46/165 (27%)

Query: 20  NEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--- 76
           +     +  ++Y     LG G + EV  A         A+K I           LE+   
Sbjct: 25  SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI----------RLEHEEE 74

Query: 77  --------EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYL 128
                   E+ +L+                         L H NI++L       H+++L
Sbjct: 75  GVPGTAIREVSLLKE------------------------LQHRNIIELKSVIHHNHRLHL 110

Query: 129 VMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
           + E     +L   + +    + +     + Q++  V++ H  R L
Sbjct: 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 55.7 bits (135), Expect = 7e-10
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 24/148 (16%)

Query: 27  IEEKYILKELLGTGAFSEV-RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +  +Y + + LG GAF +V    + +  G   AVKI+  K +    ++  +EI+VL    
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV--KNVDRYCEAARSEIQVLEHL- 68

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                        N+ D +         VQ++E FE    + +V EL+ G   +D I E 
Sbjct: 69  -------------NTTDPNSTF----RCVQMLEWFEHHGHICIVFELL-GLSTYDFIKEN 110

Query: 146 G--SYTEKDASMLIRQVLEAVDYMHEAR 171
           G   +       +  Q+ ++V+++H  +
Sbjct: 111 GFLPFRLDHIRKMAYQICKSVNFLHSNK 138

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 55.4 bits (134), Expect = 7e-10
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 30/139 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN---EIKVLRRFSQSVH 89
           L+E++G G F +V  A     G   AVK       +    ++EN   E K+         
Sbjct: 11  LEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAM------ 62

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             L HPNI+ L      +  + LVME   GG L   +  K    
Sbjct: 63  ------------------LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIP 103

Query: 150 EKDASMLIRQVLEAVDYMH 168
                    Q+   ++Y+H
Sbjct: 104 PDILVNWAVQIARGMNYLH 122

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 55.7 bits (135), Expect = 7e-10
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 48/157 (30%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----------EI 78
           E YI  + LG G ++ V   +S+    + A+K I           LE+          E+
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI----------RLEHEEGAPCTAIREV 51

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG--G 136
            +L+                         L H NIV L +    +  + LV E +     
Sbjct: 52  SLLKD------------------------LKHANIVTLHDIIHTEKSLTLVFEYLDKDLK 87

Query: 137 ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
           +  D           +  + + Q+L  + Y H  + L
Sbjct: 88  QYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQKVL 122

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 49/160 (30%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----------EI 78
            ++   E LG G ++ V    ++  G   A+K +           L++          EI
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV----------KLDSEEGTPSTAIREI 54

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVME-----LV 133
            +++                         L H NIV+L +    ++K+ LV E     L 
Sbjct: 55  SLMKE------------------------LKHENIVRLYDVIHTENKLTLVFEFMDNDLK 90

Query: 134 TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
              +                     Q+L+ + + HE + L
Sbjct: 91  KYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 48/158 (30%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-----------E 77
           E +   E +G G +  V  A ++  G + A+K I           L+            E
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI----------RLDTETEGVPSTAIRE 52

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-- 135
           I +L+                         L HPNIV+L++    ++K+YLV E +    
Sbjct: 53  ISLLKE------------------------LNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

Query: 136 GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            +  D     G          + Q+L+ + + H  R L
Sbjct: 89  KKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVL 125

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 49/158 (31%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-----------E 77
           +KY   E +G G +  V  A++RE   + A+K +           L++           E
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALRE 51

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-- 135
           I +L+                         L H NIV+L +      K+ LV E      
Sbjct: 52  ICLLKE------------------------LKHKNIVRLHDVLHSDKKLTLVFEFCDQDL 87

Query: 136 GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            + FD     G    +     + Q+L+ + + H    L
Sbjct: 88  KKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 28/146 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
               +K  LG G + EV     ++     AVK + K+     E+ L+ E  V++      
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLK-EAAVMKEIK--- 67

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKG 146
                                HPN+VQL+     +   Y++ E +T G L D  R   + 
Sbjct: 68  ---------------------HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
             +      +  Q+  A++Y+ +  +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNF 132

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 53.5 bits (129), Expect = 4e-09
 Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 30/163 (18%)

Query: 18  KDNE------IKGPSIEEKYILKELLGTGAFSEV-RLAESRENGTMFAVKIIDKKALKGK 70
           +D++        G  ++E+Y +   LG G F +V    +     +  A+KII  + +   
Sbjct: 2   EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII--RNVGKY 59

Query: 71  EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
            ++   EI VL++                  DK+ +       V + + F     + +  
Sbjct: 60  REAARLEINVLKKI--------------KEKDKENKF----LCVLMSDWFNFHGHMCIAF 101

Query: 131 ELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEAR 171
           EL+ G   F+ + E     Y       +  Q+  A+ ++HE +
Sbjct: 102 ELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ 143

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 52.5 bits (126), Expect = 9e-09
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 40/164 (24%)

Query: 23  KGPSIEEKY-ILKELLGTGAFSEVRLAESRENGT--MFAVKIIDKKALKGKEDSLENEIK 79
           +   +E+ +      +G G +  V  A+ ++      +A+K I+     G   S   EI 
Sbjct: 14  ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIA 70

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVME------ 131
           +LR                         L HPN++ L + F      KV+L+ +      
Sbjct: 71  LLRE------------------------LKHPNVISLQKVFLSHADRKVWLLFDYAEHDL 106

Query: 132 --LVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
             ++          +           L+ Q+L+ + Y+H    L
Sbjct: 107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVL 150

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 49/159 (30%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           + E+Y     +G+GA+  V  A   + G   AVK +          K+  +        E
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR--------E 78

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI------ETFEDKHKVYLVME 131
           +++L+                           H N++ L+       + E+ + VYLV  
Sbjct: 79  LRLLKHMK------------------------HENVIGLLDVFTPARSLEEFNDVYLVTH 114

Query: 132 LVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           L+ G +L + IV+    T+     LI Q+L  + Y+H A
Sbjct: 115 LM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 47/159 (29%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           I ++Y ++ L+GTG++  V  A  +    + A+K I          K+ L+        E
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR--------E 102

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETFEDKHKVYLVMEL 132
           I +L R +                        H ++V+++     +  E   ++Y+V+E+
Sbjct: 103 IAILNRLN------------------------HDHVVKVLDIVIPKDVEKFDELYVVLEI 138

Query: 133 VTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR 171
               +           TE     L+  +L  V Y+H A 
Sbjct: 139 A-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 39/159 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-------EIKVL 81
            +Y     +G GA+  V  A    +G   A+K      +                E+ +L
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGGGGGGGLPISTVREVALL 65

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF-----EDKHKVYLVMELVTG- 135
           RR                          HPN+V+L++       + + KV LV E V   
Sbjct: 66  RRLEAF---------------------EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD 104

Query: 136 -GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                D+    G    +    L+RQ L  +D++H    +
Sbjct: 105 LRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIV 142

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 25/119 (21%), Positives = 37/119 (31%), Gaps = 32/119 (26%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENG-------TMFAVKIIDKKALKGKEDSLENEIKVL 81
           E  I  E LG G F+++     RE G       T   +K++DK      E   E    ++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMM 66

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
            + S                        H ++V          +  LV E V  G L  
Sbjct: 67  SKLS------------------------HKHLVLNYGVCVCGDENILVQEFVKFGSLDT 101

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 32/150 (21%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +  K+ L   +G+G+F E+ L  + +     A+K+ + K    K   L  E K+ R    
Sbjct: 5   VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRILQG 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG---GELFDRIV 143
                                     I  +     +     LVM+L+ G    +LF+   
Sbjct: 62  GTG-----------------------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFC- 96

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                + K   ML  Q++  V+++H   +L
Sbjct: 97  -SRKLSLKTVLMLADQMINRVEFVHSKSFL 125

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 50.7 bits (122), Expect = 4e-08
 Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 28/115 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
            +    + LG GAF +V  A        +     AVK++   A   + ++L +E+KVL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                                     H NIV L+          ++ E    G+L
Sbjct: 83  LGN-----------------------HMNIVNLLGACTIGGPTLVITEYCCYGDL 114

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 22/138 (15%), Positives = 52/138 (37%), Gaps = 29/138 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQSVHNR 91
           + EL+G G F +V     R +G + A+++ID +   + +  + + E+   R+        
Sbjct: 37  IGELIGKGRFGQVYHG--RWHGEV-AIRLIDIERDNEDQLKAFKREVMAYRQ-------- 85

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGSYTE 150
                             H N+V  +        + ++  L  G  L+  +   K     
Sbjct: 86  ----------------TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV 129

Query: 151 KDASMLIRQVLEAVDYMH 168
                + +++++ + Y+H
Sbjct: 130 NKTRQIAQEIVKGMGYLH 147

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 49.9 bits (120), Expect = 5e-08
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 40/151 (26%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN----EIKVLRRF 84
           ++  L + +G G F +V L +    G   AVK I       K D+       E  V+ + 
Sbjct: 21  KELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCI-------KNDATAQAFLAEASVMTQL 71

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET-FEDKHKVYLVMELVTGGELFD--R 141
                                    H N+VQL+    E+K  +Y+V E +  G L D  R
Sbjct: 72  R------------------------HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 107

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
              +              V EA++Y+    +
Sbjct: 108 SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 50/168 (29%)

Query: 19  DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-- 76
              +    + EKY   E +G G +  V  A+    G + A+K I           L+   
Sbjct: 11  RENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRI----------RLDAED 59

Query: 77  ---------EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVY 127
                    EI +L+                         L HPNIV LI+    +  + 
Sbjct: 60  EGIPSTAIREISLLKE------------------------LHHPNIVSLIDVIHSERCLT 95

Query: 128 LVMELVTG--GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
           LV E +     ++ D    K    +    + + Q+L  V + H+ R L
Sbjct: 96  LVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 45/175 (25%)

Query: 6   KKDSAKKLKKDGKDN-EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK 64
            + +     +  +    +    ++    L + +G G F +V L +    G   AVK I  
Sbjct: 173 MEGTVAAQDEFYRSGWALNMKELK----LLQTIGKGEFGDVMLGD--YRGNKVAVKCI-- 224

Query: 65  KALKGKEDSLE----NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET- 119
                K D+       E  V+ +                          H N+VQL+   
Sbjct: 225 -----KNDATAQAFLAEASVMTQLR------------------------HSNLVQLLGVI 255

Query: 120 FEDKHKVYLVMELVTGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            E+K  +Y+V E +  G L D  R   +              V EA++Y+    +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 30/117 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-------SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
           +K  L + LG GAF +V +AE         +     AVK++   A +     L +E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           +   +                       H NI+ L+        +Y+++E  + G L
Sbjct: 95  KMIGK-----------------------HKNIINLLGACTQDGPLYVIVEYASKGNL 128

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 28/148 (18%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +  +Y L   +G+G+F ++ L      G   A+K+   + +K K   L  E K+ +    
Sbjct: 7   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYKMMQG 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD-RIVEK 145
            V                        I  +     +     +VMEL+ G  L D      
Sbjct: 64  GVG-----------------------IPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCS 99

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYL 173
             ++ K   +L  Q++  ++Y+H   ++
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKNFI 127

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 49.5 bits (119), Expect = 8e-08
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 30/142 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
             + +G+G F  V L     N    A+K I ++    +ED +E E +V+ + S       
Sbjct: 12  FVQEIGSGQFGLVHLGYWL-NKDKVAIKTI-REGAMSEEDFIE-EAEVMMKLS------- 61

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
                            HP +VQL     ++  + LV E +  G L D  R  ++G +  
Sbjct: 62  -----------------HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAA 103

Query: 151 KDASMLIRQVLEAVDYMHEARY 172
           +    +   V E + Y+ EA  
Sbjct: 104 ETLLGMCLDVCEGMAYLEEACV 125

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 53/160 (33%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID--------KKALKGKEDSLENEI 78
           I   + LK LLG GA+  V  A  +  G + A+K I+         + L+        EI
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR--------EI 60

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI--------ETFEDKHKVYLVM 130
           K+L+ F                         H NI+ +         E F +   VY++ 
Sbjct: 61  KILKHFK------------------------HENIITIFNIQRPDSFENFNE---VYIIQ 93

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           EL+   +L  R++     ++      I Q L AV  +H +
Sbjct: 94  ELM-QTDL-HRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 49/164 (29%)

Query: 24  GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN-EIKVLR 82
           G   E  Y   +++G G+F  V  A+  E+    A+K    K L+ K    +N E++++R
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESD-EVAIK----KVLQDKRF--KNRELQIMR 87

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVMELVTGG 136
                                    + HPN+V L   F      +D+  + LV+E V   
Sbjct: 88  I------------------------VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV--P 121

Query: 137 ELFDRIVEKGSYTEKDASM---LIR----QVLEAVDYMHEARYL 173
           E   R      Y +   +M   LI+    Q+L ++ Y+H     
Sbjct: 122 ETVYRASR--HYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGIC 163

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 47/158 (29%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           + + YI+K L+G G++  V LA  +      A+K ++         K+ L+        E
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR--------E 75

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETFEDKHKVYLVMEL 132
           I +L R                             I++L      +      ++Y+V+E+
Sbjct: 76  ITILNRLK------------------------SDYIIRLYDLIIPDDLLKFDELYIVLEI 111

Query: 133 VTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
               +L          TE+    ++  +L   +++HE+
Sbjct: 112 A-DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 30/117 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-------SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
           +K  L + LG G F +V +AE         +     AVK++   A +     L +E++++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           +   +                       H NI+ L+        +Y+++E  + G L
Sbjct: 141 KMIGK-----------------------HKNIINLLGACTQDGPLYVIVEYASKGNL 174

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 33/149 (22%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L E +G G + EV     +  G   AVKI   +  K      E E+              
Sbjct: 12  LLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEK--SWFRETELYNTVM--------- 58

Query: 93  DETNDNNSNDKDKERLTHPNIVQLI----ETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                          L H NI+  I     +     +++L+      G L+D  ++  + 
Sbjct: 59  ---------------LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTL 102

Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSKPR 177
                  ++  +   + ++H   + ++ +
Sbjct: 103 DTVSCLRIVLSIASGLAHLHIEIFGTQGK 131

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 28/115 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           E     ++LG+GAF +V  A              AVK++ +KA   + ++L +E+K++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                                     H NIV L+        +YL+ E    G+L
Sbjct: 105 LGS-----------------------HENIVNLLGACTLSGPIYLIFEYCCYGDL 136

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 108 LTHPNIVQLIETFEDKHKVYLVMELVTG--GELFDRIVEKGSYTEKDASMLIRQVLEAVD 165
           L H NIV+L +    K ++ LV E +     +L D    +G      A   + Q+L  + 
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIA 114

Query: 166 YMHEARYL 173
           Y H+ R L
Sbjct: 115 YCHDRRVL 122

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 47/157 (29%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID--------KKALKGKEDSLENEI 78
           +  +Y     +G GA+  V  A    N    A+K I         ++ L+        EI
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR--------EI 76

Query: 79  KVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF-----EDKHKVYLVMELV 133
           K+L RF                         H NI+ + +       E    VY+V +L+
Sbjct: 77  KILLRFR------------------------HENIIGINDIIRAPTIEQMKDVYIVQDLM 112

Query: 134 TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
              +L  ++++    +       + Q+L  + Y+H A
Sbjct: 113 -ETDL-YKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 30/145 (20%)

Query: 33  LKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +++++G+G   EV   RL    +     A+K +     + +     +E  ++ +F     
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD---- 108

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGS 147
                               HPNI++L           +V E +  G L    R    G 
Sbjct: 109 --------------------HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ 147

Query: 148 YTEKDASMLIRQVLEAVDYMHEARY 172
           +T      ++R V   + Y+ +  Y
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGY 172

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 32/163 (19%)

Query: 17  GKD-NEIKGPSIEEKYI-LKELLGTGAFSEVRLA----ESRENGTMFAVKIIDKKALKGK 70
           G+  N+     ++E      ++LG+GAF  V       E  +     A+K + +      
Sbjct: 1   GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60

Query: 71  EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVM 130
              + +E  V+                            +P++ +L+        V L+ 
Sbjct: 61  NKEILDEAYVMASVD------------------------NPHVCRLLGICL-TSTVQLIT 95

Query: 131 ELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           +L+  G L D + E K +   +       Q+ + ++Y+ + R 
Sbjct: 96  QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 30/119 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-------SRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
           ++ +L + LG GAF +V LAE            T  AVK++   A +     L +E++++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           +   +                       H NI+ L+        +Y+++E  + G L +
Sbjct: 129 KMIGK-----------------------HKNIINLLGACTQDGPLYVIVEYASKGNLRE 164

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
                   +G GAF  V  A        E  TM AVK++ ++A    +   + E  ++  
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           F                         +PNIV+L+        + L+ E +  G+L
Sbjct: 107 FD------------------------NPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 30/142 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L + LG+G F  V+L + +      AVK+I K+    +++  + E + + + S       
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQ-YDVAVKMI-KEGSMSEDEFFQ-EAQTMMKLS------- 61

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
                            HP +V+       ++ +Y+V E ++ G L +  R         
Sbjct: 62  -----------------HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR-SHGKGLEP 103

Query: 151 KDASMLIRQVLEAVDYMHEARY 172
                +   V E + ++   ++
Sbjct: 104 SQLLEMCYDVCEGMAFLESHQF 125

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 32/158 (20%), Positives = 55/158 (34%), Gaps = 50/158 (31%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVK--------IID-KKALKGKEDSLENE 77
           +  KY L + LG GA+  V  +  R  G + AVK          D ++  +        E
Sbjct: 7   VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR--------E 58

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETFEDKHKVYLVMEL 132
           I +L   S                        H NIV L+     +   D   VYLV + 
Sbjct: 59  IMILTELSG-----------------------HENIVNLLNVLRADNDRD---VYLVFDY 92

Query: 133 VTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           +   +L   ++            ++ Q+++ + Y+H  
Sbjct: 93  M-ETDL-HAVIRANILEPVHKQYVVYQLIKVIKYLHSG 128

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 45/160 (28%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--EIKVLRRF 84
           +  +Y+  + LG G    V  A   +     A+K   K  L   +       EIK++RR 
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRL 65

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF--------------EDKHKVYLVM 130
                                    H NIV++ E                 + + VY+V 
Sbjct: 66  D------------------------HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQ 101

Query: 131 ELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           E +   +L   ++E+G   E+ A + + Q+L  + Y+H A
Sbjct: 102 EYM-ETDL-ANVLEQGPLLEEHARLFMYQLLRGLKYIHSA 139

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 25/114 (21%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENG--TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
                ++++G G F +V  A  +++G     A+K + + A K        E++VL +   
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
                                  HPNI+ L+   E +  +YL +E    G L D
Sbjct: 85  -----------------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 28/117 (23%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
                 + LG GAF +V  A        +     AVK++   A   ++++L +E+K++  
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
             Q                       H NIV L+        V ++ E    G+L +
Sbjct: 106 LGQ-----------------------HENIVNLLGACTHGGPVLVITEYCCYGDLLN 139

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 30/146 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E   L+  LG G F EV +        + A+K + K      E  L+ E +V+++     
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQ-EAQVMKKLR--- 320

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKG 146
                                H  +VQL     ++  +Y+V E ++ G L D  +     
Sbjct: 321 ---------------------HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGK 358

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
                    +  Q+   + Y+    Y
Sbjct: 359 YLRLPQLVDMAAQIASGMAYVERMNY 384

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 31/117 (26%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           ++  L + LG GAF +V  A+             AVK++ + A   +  +L +E+K+L  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELVTGGEL 138
                                     H N+V L+   T      + +++E    G L
Sbjct: 87  IGH-----------------------HLNVVNLLGACTKPGGP-LMVIVEFCKFGNL 119

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 36/171 (21%)

Query: 7   KDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEV---RLAESRENGTMFAVKIID 63
           +D  + + +  K  E+   +I     + +++G G F EV   RL    +     A+K + 
Sbjct: 29  EDPTQTVHEFAK--ELDATNIS----IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82

Query: 64  KKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDK 123
               + +      E  ++ +F                         HPNI++L       
Sbjct: 83  VGYTEKQRRDFLGEASIMGQFD------------------------HPNIIRLEGVVTKS 118

Query: 124 HKVYLVMELVTGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
             V +V E +  G L    R      +T      ++R +   + Y+ +  Y
Sbjct: 119 KPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 30/142 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
             + LGTG F  V+  + R      A+K+I K+    +++ +E E KV+   S       
Sbjct: 28  FLKELGTGQFGVVKYGKWRGQ-YDVAIKMI-KEGSMSEDEFIE-EAKVMMNLS------- 77

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
                            H  +VQL      +  ++++ E +  G L +  R   +  +  
Sbjct: 78  -----------------HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQT 119

Query: 151 KDASMLIRQVLEAVDYMHEARY 172
           +    + + V EA++Y+   ++
Sbjct: 120 QQLLEMCKDVCEAMEYLESKQF 141

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 33/142 (23%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNR 91
               L      E+     R  G    VK++  +    +       E   LR FS      
Sbjct: 14  FLTKLNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS------ 65

Query: 92  LDETNDNNSNDKDKERLTHPNIVQLI--ETFEDKHKVYLVMELVTGGELFDRIVEKGSYT 149
                             HPN++ ++            L+   +  G L++ + E  ++ 
Sbjct: 66  ------------------HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV 107

Query: 150 EKDASMLIR---QVLEAVDYMH 168
             D S  ++    +   + ++H
Sbjct: 108 V-DQSQAVKFALDMARGMAFLH 128

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 38/137 (27%)

Query: 12  KLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALK 68
           +LK+  +D  I     E+++ L  +LG G F  VR A+ ++        AVK++    + 
Sbjct: 10  ELKEKLEDVLIP----EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA 65

Query: 69  GKE-DSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI------ETFE 121
             + +    E   ++ F                         HP++ +L+          
Sbjct: 66  SSDIEEFLREAACMKEFD------------------------HPHVAKLVGVSLRSRAKG 101

Query: 122 DKHKVYLVMELVTGGEL 138
                 +++  +  G+L
Sbjct: 102 RLPIPMVILPFMKHGDL 118

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 25/154 (16%), Positives = 51/154 (33%), Gaps = 31/154 (20%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +   Y +   +G G+F  +    +  N    A+K    +  +     L +E +  +  + 
Sbjct: 8   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK---FEPRRSDAPQLRDEYRTYKLLAG 64

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD-RIVEK 145
                                     I  +    ++     LV++L  G  L D   +  
Sbjct: 65  CTG-----------------------IPNVYYFGQEGLHNVLVIDL-LGPSLEDLLDLCG 100

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYLS---KP 176
             ++ K  +M  +Q+L  V  +HE   +    KP
Sbjct: 101 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 134

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           +  +L + LG G F +V  A       R   T  AVK++ + A   +   L +E  VL++
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
            +                        HP++++L         + L++E    G L
Sbjct: 83  VN------------------------HPHVIKLYGACSQDGPLLLIVEYAKYGSL 113

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 33/167 (19%)

Query: 9   SAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAE--SRENGTMFAVKIIDKKA 66
           + ++++       +    +    +  + LG+G F  V+      ++     AVKI+  +A
Sbjct: 2   ALEEIRPKEV--YLDRKLLT---LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA 56

Query: 67  L-KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK 125
                +D L  E  V+++                          +P IV++I   E    
Sbjct: 57  NDPALKDELLAEANVMQQLD------------------------NPYIVRMIGICE-AES 91

Query: 126 VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
             LVME+   G L   + +     +K+   L+ QV   + Y+ E+ +
Sbjct: 92  WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 138

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 35/152 (23%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--EIKVLRRF 84
           +   Y   + +G+GA+  V  A     G   A+K +  +  + +  +     E+++L+  
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHM 81

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI------ETFEDKHKVYLVMELVTGGEL 138
                                    H N++ L+      ET +D    YLVM  + G +L
Sbjct: 82  R------------------------HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDL 116

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
             ++++     E     L+ Q+L+ + Y+H A
Sbjct: 117 -GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 28/148 (18%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +   + + + +G G F E+RL ++       A+K+   K+   +   L  E +  ++   
Sbjct: 7   VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGS 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD-RIVEK 145
                                     I Q+           +V+EL  G  L D   +  
Sbjct: 64  GDG-----------------------IPQVYYFGPCGKYNAMVLEL-LGPSLEDLFDLCD 99

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYL 173
            +++ K   M+  Q++  ++Y+H    +
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLI 127

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 29/149 (19%)

Query: 28  EEKYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
            E  +L  +LG G F EV        +      AVK   K      ++   +E  +++  
Sbjct: 11  REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-V 143
                                    HP+IV+LI   E +   +++MEL   GEL   +  
Sbjct: 71  D------------------------HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLER 105

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            K S       +   Q+ +A+ Y+     
Sbjct: 106 NKNSLKVLTLVLYSLQICKAMAYLESINC 134

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 45/161 (27%)

Query: 29  EKYILKELLGTGAFSEVRLA-ESRENGTMFAVKIIDKKALKGKEDSLEN--------EIK 79
           ++Y     +G GA+ +V  A + +  G   A+K +       +  + E         E+ 
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-------RVQTGEEGMPLSTIREVA 63

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE-----TFEDKHKVYLVMELVT 134
           VLR                           HPN+V+L +       + + K+ LV E V 
Sbjct: 64  VLRHLETF---------------------EHPNVVRLFDVCTVSRTDRETKLTLVFEHVD 102

Query: 135 G--GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                  D++ E G    +    ++ Q+L  +D++H  R +
Sbjct: 103 QDLTTYLDKVPEPGV-PTETIKDMMFQLLRGLDFLHSHRVV 142

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 46.7 bits (111), Expect = 8e-07
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 33/155 (21%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I    +L+E +G G F EV   + R  G   AVKI   +  +      E EI        
Sbjct: 40  IARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER--SWFREAEIYQTVM--- 92

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLI----ETFEDKHKVYLVMELVTGGELFDRI 142
                                L H NI+  I    +      +++LV +    G LFD  
Sbjct: 93  ---------------------LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-Y 130

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR 177
           + + + T +    L       + ++H     ++ +
Sbjct: 131 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 39/184 (21%), Positives = 61/184 (33%), Gaps = 61/184 (33%)

Query: 13  LKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED 72
           + K     E        KY     +G G F EV  A  R+ G   A+K +          
Sbjct: 1   MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---------- 50

Query: 73  SLEN-----------EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--- 118
            +EN           EIK+L+                         L H N+V LIE   
Sbjct: 51  LMENEKEGFPITALREIKILQL------------------------LKHENVVNLIEICR 86

Query: 119 -----TFEDKHKVYLVMELV----TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
                    K  +YLV +       G  L   ++ K  +T  +   +++ +L  + Y+H 
Sbjct: 87  TKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVK--FTLSEIKRVMQMLLNGLYYIHR 142

Query: 170 ARYL 173
            + L
Sbjct: 143 NKIL 146

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 46.8 bits (111), Expect = 8e-07
 Identities = 29/151 (19%), Positives = 47/151 (31%), Gaps = 35/151 (23%)

Query: 25  PSIEEKYI-LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           PS++   + L EL+G G +  V            AVK+           +  NE  + R 
Sbjct: 8   PSLDLDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN----RQNFINEKNIYR- 60

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETFEDKHKVYLVMELVTGGEL 138
                                   + H NI + I      T + + +  LVME    G L
Sbjct: 61  ---------------------VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSL 99

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
               +   +     +  L   V   + Y+H 
Sbjct: 100 XK-YLSLHTSDWVSSCRLAHSVTRGLAYLHT 129

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 46.5 bits (111), Expect = 8e-07
 Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 40/170 (23%)

Query: 5   GKKDSAK-KLKKDGKDN-EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKII 62
            K         +D  D+ EI    I     + + +G+G+F  V     + +G + AVK++
Sbjct: 2   KKGHHHHHHGSRDAADDWEIPDGQIT----VGQRIGSGSFGTVYKG--KWHGDV-AVKML 54

Query: 63  DKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--T 119
           +  A   +   + +NE+ VLR+                          H NI+  +   T
Sbjct: 55  NVTAPTPQQLQAFKNEVGVLRK------------------------TRHVNILLFMGYST 90

Query: 120 FEDKHKVYLVMELVTGGELFDRI-VEKGSYTEKDASMLIRQVLEAVDYMH 168
                ++ +V +   G  L+  +   +  +  K    + RQ    +DY+H
Sbjct: 91  ---APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 17/162 (10%)

Query: 18  KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLE 75
               +       ++ LK          +  A      T  +     K +LK   K+  L 
Sbjct: 31  PTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLF 90

Query: 76  NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE--TFEDKHKVYLVMELV 133
           NE    +R ++             +  K         I   +     +DK++ +LV+  +
Sbjct: 91  NEQNFFQRAAK---------PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYR-FLVLPSL 140

Query: 134 TGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            G  L     +  K   +E+    +  ++L+A++++HE  Y+
Sbjct: 141 -GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYV 181

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           EK  +   LG G+F  V           E  T  A+K +++ A   +     NE  V++ 
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           F+                          ++V+L+          ++MEL+T G+L
Sbjct: 85  FN------------------------CHHVVRLLGVVSQGQPTLVIMELMTRGDL 115

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 42/160 (26%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK-IIDKKALKGKEDSLENEIKVL 81
           +     +++ ++ + G G F  V+L + +  G   A+K +I     + +E      ++ L
Sbjct: 17  RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ---IMQDL 73

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF-----EDKHKVYL--VMELVT 134
                                       HPNIVQL   F      D+  +YL  VME V 
Sbjct: 74  AVLH------------------------HPNIVQLQSYFYTLGERDRRDIYLNVVMEYV- 108

Query: 135 GGELFDRIVEKGSYTEKDASML-----IRQVLEAVDYMHE 169
             +   R        +     +     + Q++ ++  +H 
Sbjct: 109 -PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 39/160 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
              +LK  LG GAF +V LAE       ++  + AVK + + +   ++D  + E ++L  
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD-FQREAELLTM 99

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL--FDR 141
                                     H +IV+      +   + +V E +  G+L  F R
Sbjct: 100 LQ------------------------HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 135

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEAR-------YLS 174
                +        +    L     +  A        YL+
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 26/152 (17%), Positives = 60/152 (39%), Gaps = 36/152 (23%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLEN--EIKVLRRF 84
           + + Y+    +G+GA+  V  A  + +G   A+K +  +  + +  +     E+ +L+  
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHM 80

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI------ETFEDKHKVYLVMELVTGGEL 138
                                    H N++ L+       +  + +  YLVM  +   +L
Sbjct: 81  Q------------------------HENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDL 115

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
              +     ++E+    L+ Q+L+ + Y+H A
Sbjct: 116 QKIM--GLKFSEEKIQYLVYQMLKGLKYIHSA 145

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 33/159 (20%)

Query: 18  KDNEIKGPSIEEKYILKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSL 74
           +D EI+   IE    L   +G G F +V               A+K           +  
Sbjct: 8   RDYEIQRERIE----LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 63

Query: 75  ENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVT 134
             E   +R+F                         HP+IV+LI     ++ V+++MEL T
Sbjct: 64  LQEALTMRQFD------------------------HPHIVKLIGVIT-ENPVWIIMELCT 98

Query: 135 GGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
            GEL   +   K S       +   Q+  A+ Y+   R+
Sbjct: 99  LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 30/142 (21%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L++ LG G F EV +A   ++  + AVK + K      E  L  E  V++          
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLA-EANVMKTLQ------- 241

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKGSYTE 150
                            H  +V+L      +  +Y++ E +  G L D  +  E      
Sbjct: 242 -----------------HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPL 283

Query: 151 KDASMLIRQVLEAVDYMHEARY 172
                   Q+ E + ++ +  Y
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRNY 305

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 30/146 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E   L E LG G F EV +     +  + AVK + K+     +  L  E  ++++     
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLA-EANLMKQLQ--- 66

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RIVEKG 146
                                H  +V+L      +  +Y++ E +  G L D  +     
Sbjct: 67  ---------------------HQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGI 104

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
             T      +  Q+ E + ++ E  Y
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNY 130

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 36/173 (20%)

Query: 2   PLFGKKDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKI 61
                K   + L KD    EI   S+     L+  LG G F EV +        + A+K 
Sbjct: 163 VCPTSKPQTQGLAKDAW--EIPRESLR----LEVKLGQGCFGEVWMGTWNGTTRV-AIKT 215

Query: 62  IDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFE 121
           + K      E  L+ E +V+++                          H  +VQL     
Sbjct: 216 L-KPGTMSPEAFLQ-EAQVMKKLR------------------------HEKLVQLYAVVS 249

Query: 122 DKHKVYLVMELVTGGELFD--RIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
           ++  +Y+V E ++ G L D  +              +  Q+   + Y+    Y
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 16/161 (9%)

Query: 25  PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVK-IIDKKALKGKEDSL------ENE 77
            +  +KY L + LGTG+F  V      E+G  FA+K ++     K +E  +       N 
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 78  IKVLRRF--SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG 135
           IK++  F  +     +  +  D+++    K    + +   +I        + ++ME V  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-- 120

Query: 136 GELFDRIVEKGSYTEKDASML-----IRQVLEAVDYMHEAR 171
            +   ++++    + +   M      I Q+  AV ++H   
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 29/148 (19%)

Query: 29  EKYILKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           E+  L   +G G F +V               A+K           +    E   +R+F 
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE- 144
                                   HP+IV+LI     ++ V+++MEL T GEL   +   
Sbjct: 450 ------------------------HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR 484

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           K S       +   Q+  A+ Y+   R+
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLESKRF 512

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 30/115 (26%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
              +LK  LG GAF +V LAE       ++  + AVK + K          + E ++L  
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTLAARKDFQREAELLTN 73

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                                     H +IV+      D   + +V E +  G+L
Sbjct: 74  LQ------------------------HEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 31/150 (20%)

Query: 29  EKYILKELLGTGAFSEVRLA----ESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
                ++++G G F EV        S +     A+K +     + +      E  ++ +F
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD--RI 142
           S                        H NI++L         + ++ E +  G L    R 
Sbjct: 104 S------------------------HHNIIRLEGVISKYKPMMIITEYMENGALDKFLR- 138

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            + G ++      ++R +   + Y+    Y
Sbjct: 139 EKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 31/159 (19%)

Query: 20  NEIKGPSIEEKYI-LKELLGTGAFSEVRLA----ESRENGTMFAVKIIDKKALKGKEDSL 74
           N+     ++E      ++LG+GAF  V       E  +     A+K + +         +
Sbjct: 5   NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64

Query: 75  ENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVT 134
            +E  V+                            +P++ +L+        V L+ +L+ 
Sbjct: 65  LDEAYVMASVD------------------------NPHVCRLLGICL-TSTVQLITQLMP 99

Query: 135 GGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
            G L D + E K +   +       Q+ + ++Y+ + R 
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 33/149 (22%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           + + +G G + EV + + R  G   AVK+             E EI              
Sbjct: 41  MVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEA--SWFRETEIYQTVL--------- 87

Query: 93  DETNDNNSNDKDKERLTHPNIVQLI----ETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                          + H NI+  I    +      ++YL+ +    G L+D +    + 
Sbjct: 88  ---------------MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TL 131

Query: 149 TEKDASMLIRQVLEAVDYMHEARYLSKPR 177
             K    L    +  + ++H   + ++ +
Sbjct: 132 DAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 32/160 (20%)

Query: 20  NEIKGPSIEEK----YILKELLGTGAFSEVRLAE-SRENGTMF-AVKIIDKKALKGKEDS 73
            E+K   +  K     I    LG G F  VR          +  A+K++ +   K   + 
Sbjct: 323 EELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE 382

Query: 74  LENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELV 133
           +  E +++ +                          +P IV+LI   +    + LVME+ 
Sbjct: 383 MMREAQIMHQLD------------------------NPYIVRLIGVCQ-AEALMLVMEMA 417

Query: 134 TGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
            GG L   +V  +      + + L+ QV   + Y+ E  +
Sbjct: 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           +   L   LG GAF EV   +     +  +    AVK + +   +  E     E  ++ +
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           F+                        H NIV+ I         ++++EL+ GG+L
Sbjct: 131 FN------------------------HQNIVRCIGVSLQSLPRFILLELMAGGDL 161

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 32/155 (20%)

Query: 25  PSIEEKYI-LKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV 80
                  +   E++G G F  V    L ++       AVK +++    G+      E  +
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET-FEDKHKVYLVMELVTGGEL- 138
           ++ FS                        HPN++ L+      +    +V+  +  G+L 
Sbjct: 80  MKDFS------------------------HPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115

Query: 139 -FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            F R  E  + T KD      QV + + Y+   ++
Sbjct: 116 NFIR-NETHNPTVKDLIGFGLQVAKGMKYLASKKF 149

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 28/144 (19%)

Query: 32  ILKELLGTGAFSEVRLAE--SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           I    LG G F  VR      R+     A+K++ +   K   + +  E +++ +      
Sbjct: 13  IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD---- 68

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGSY 148
                               +P IV+LI   +    + LVME+  GG L   +  ++   
Sbjct: 69  --------------------NPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEI 107

Query: 149 TEKDASMLIRQVLEAVDYMHEARY 172
              + + L+ QV   + Y+ E  +
Sbjct: 108 PVSNVAELLHQVSMGMKYLEEKNF 131

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           +   L   LG GAF EV   +     +  +    AVK + +   +  E     E  ++ +
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
           F+                        H NIV+ I         +++MEL+ GG+L
Sbjct: 90  FN------------------------HQNIVRCIGVSLQSLPRFILMELMAGGDL 120

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 16/175 (9%)

Query: 5   GKKDSAK-KLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID 63
           G++ SAK  L +     EI        + +   +G G F  + LA+   + ++ +     
Sbjct: 10  GRQSSAKRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCV 69

Query: 64  KKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI----ET 119
            K        L  E+K  +R ++          +         +L +  + +        
Sbjct: 70  VKVEPSDNGPLFTELKFYQRAAKP---------EQIQKWIRTRKLKYLGVPKYWGSGLHD 120

Query: 120 FEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYL 173
              K   +++M+   G +L          ++ K    L  ++L+ ++Y+HE  Y+
Sbjct: 121 KNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV 174

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 19/115 (16%), Positives = 32/115 (27%), Gaps = 29/115 (25%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
                 E LG   F +V           E     A+K +  KA     +   +E  +  R
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGEL 138
                                     HPN+V L+        + ++    + G+L
Sbjct: 69  LQ------------------------HPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 44/161 (27%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVK-IIDKKALKGKEDSLEN--------- 76
           ++  Y ++  + +G++  V      E G   A+K + +  +     + L +         
Sbjct: 20  MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78

Query: 77  EIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF-----EDKHKVYLVME 131
           EI++L  F                         HPNI+ L + F        HK+YLV E
Sbjct: 79  EIRLLNHFH------------------------HPNILGLRDIFVHFEEPAMHKLYLVTE 114

Query: 132 LVTGGELFDRIVEKGSYTEKDASM--LIRQVLEAVDYMHEA 170
           L+   +L  +++           +   +  +L  +  +HEA
Sbjct: 115 LM-RTDL-AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA 153

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 31/152 (20%)

Query: 27  IEEKYI-LKELLGTGAFSEVRLA----ESRENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
            +E  +   ++LG+G F  V       E         +K+I+ K+ +    ++ + +  +
Sbjct: 10  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
                                       H +IV+L+        + LV + +  G L D 
Sbjct: 70  GSLD------------------------HAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDH 104

Query: 142 IVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           + + +G+   +       Q+ + + Y+ E   
Sbjct: 105 VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 32/155 (20%)

Query: 25  PSIEEKYI-LKELLGTGAFSEV---RLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV 80
                  +   E++G G F  V    L ++       AVK +++    G+      E  +
Sbjct: 84  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET-FEDKHKVYLVMELVTGGEL- 138
           ++ FS                        HPN++ L+      +    +V+  +  G+L 
Sbjct: 144 MKDFS------------------------HPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179

Query: 139 -FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            F R  E  + T KD      QV + + ++   ++
Sbjct: 180 NFIR-NETHNPTVKDLIGFGLQVAKGMKFLASKKF 213

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 50/159 (31%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           + ++Y   + +G+GA   V  A         A+K +          K+A +        E
Sbjct: 23  VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR--------E 74

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVME 131
           + +++  +                        H NI+ L+  F      E+   VY+VME
Sbjct: 75  LVLMKCVN------------------------HKNIIGLLNVFTPQKSLEEFQDVYIVME 110

Query: 132 LVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           L+    L   I  +     +  S L+ Q+L  + ++H A
Sbjct: 111 LM-DANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSA 146

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 31/171 (18%)

Query: 7   KDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEV---RLAESRENGTMFAVKIID 63
           +D    L  + KD  I  P          ++G G F  V      +  +N    A+K + 
Sbjct: 1   RDLDSALLAEVKDVLI--PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS 58

Query: 64  KKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIET-FED 122
           +     + ++   E  ++R  +                        HPN++ LI      
Sbjct: 59  RITEMQQVEAFLREGLLMRGLN------------------------HPNVLALIGIMLPP 94

Query: 123 KHKVYLVMELVTGGELFDRI-VEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
           +   ++++  +  G+L   I   + + T KD      QV   ++Y+ E ++
Sbjct: 95  EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 50/159 (31%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIID---------KKALKGKEDSLENE 77
           + ++Y   + +G+GA   V  A         A+K +          K+A +        E
Sbjct: 60  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR--------E 111

Query: 78  IKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVME 131
           + +++  +                        H NI+ L+  F      E+   VYLVME
Sbjct: 112 LVLMKCVN------------------------HKNIISLLNVFTPQKTLEEFQDVYLVME 147

Query: 132 LVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA 170
           L+    L   I  +     +  S L+ Q+L  + ++H A
Sbjct: 148 LM-DANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSA 183

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 43.9 bits (104), Expect = 7e-06
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 33/141 (23%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           L E+   G F  V  A+        AVKI   +  +  ++  E E+  L           
Sbjct: 28  LLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQN--EYEVYSLPG--------- 74

Query: 93  DETNDNNSNDKDKERLTHPNIVQLI----ETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                          + H NI+Q I            ++L+      G L D  ++    
Sbjct: 75  ---------------MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSD-FLKANVV 118

Query: 149 TEKDASMLIRQVLEAVDYMHE 169
           +  +   +   +   + Y+HE
Sbjct: 119 SWNELCHIAETMARGLAYLHE 139

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 35/158 (22%)

Query: 21  EIKGPSIEEKYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLE-- 75
            I     E+   L E LG G+F  VR  E           AVK +    L   E   +  
Sbjct: 14  LIG----EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 69

Query: 76  NEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG 135
            E+  +                            H N+++L         + +V EL   
Sbjct: 70  REVNAMHSLD------------------------HRNLIRLYGVVL-TPPMKMVTELAPL 104

Query: 136 GELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARY 172
           G L DR+ + +G +     S    QV E + Y+   R+
Sbjct: 105 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 33/119 (27%)

Query: 29  EKYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
              IL ++LG G F  V               AVK +       +E +   +E   ++ F
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-----ETFEDKHKVYLVMELVTGGEL 138
           S                        HPN+++L+      + +   K  +++  +  G+L
Sbjct: 94  S------------------------HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL 128

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
            EK    E +G G F EV       + T  A+KII  +       S +   + +      
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQ------LIETFED----------------KHK 125
                  + +  +  +    L   + VQ      L++ ++                   +
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 126 VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           +++V+E   GG   +++  K S +   A  ++ Q+  ++     
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLS-SLATAKSILHQLTASLAVAEA 179

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 29/118 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           ++  L + LG GAF +V  A+             AVK++ + A   +  +L +E+K+L  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLI-ETFEDKHKVYLVMELVTGGELFD 140
                                     H N+V L+    +    + +++E    G L  
Sbjct: 82  IGH-----------------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.98
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.98
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.95
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.94
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.94
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.94
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.94
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.94
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.93
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.93
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.93
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.93
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.93
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.93
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.93
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.93
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.92
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.92
3niz_A	311	Rhodanese family protein; structural genomics, str	99.92
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.92
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.92
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.92
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.92
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.92
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.92
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.92
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.92
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.91
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.91
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.91
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.91
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.91
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.91
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.91
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.91
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.91
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.91
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.9
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.9
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.9
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.9
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.9
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.9
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.9
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.9
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.9
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.9
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.9
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.9
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.9
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.9
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.9
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.9
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.9
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.9
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.9
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.9
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.9
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.9
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.9
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.9
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.9
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.9
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.9
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.89
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.89
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.89
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.89
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.89
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.89
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.89
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.89
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.89
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.89
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.89
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.89
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.89
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.89
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.88
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.88
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.88
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.88
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.88
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.88
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.88
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.88
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.88
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.88
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.88
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.87
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.87
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.87
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.86
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.86
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.86
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.86
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.86
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.85
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.84
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.78
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.76
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.74
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.7
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.59
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.07
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.68
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.59
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.72
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.69
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.44
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.36
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.27
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.25
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.03
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.92
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.78
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.72
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.24
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	93.38
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	92.43
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.0
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	87.87
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	87.63
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	87.44
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	84.31
3mes_A	424	Choline kinase; malaria, structural genomics, stru	83.04
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	80.87
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	80.08

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3e-34  Score=213.21  Aligned_cols=128  Identities=29%  Similarity=0.513  Sum_probs=117.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||+|+||+||+|.++.+++.||||++.+....  .....+.+|+.+++.                    
T Consensus        29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~--------------------   88 (311)
T 4aw0_A           29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR--------------------   88 (311)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT--------------------
T ss_pred             CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHh--------------------
Confidence            3446799999999999999999999999999999999865432  233568899999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||++++++|++++.+|+|||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||
T Consensus        89 ----l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDl  158 (311)
T 4aw0_A           89 ----LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL  158 (311)
T ss_dssp             ----CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence                8999999999999999999999999999999999998889999999999999999999999999999997

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.9e-32  Score=206.53  Aligned_cols=125  Identities=30%  Similarity=0.559  Sum_probs=107.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+++.||+|+||.||+|.++.+++.||||++....... ....+.+|+.+++.                        
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~------------------------   79 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN------------------------   79 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHH------------------------
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHH------------------------
Confidence            58999999999999999999999999999999997654322 23567899999999                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++.+|+|||||+||+|.+++...+  .+++..++.|+.||+.||+|||++|||||||
T Consensus        80 l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  151 (350)
T 4b9d_A           80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI  151 (350)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTC
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            899999999999999999999999999999999997543  4789999999999999999999999999997

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.2e-32  Score=200.43  Aligned_cols=125  Identities=34%  Similarity=0.619  Sum_probs=109.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.+.....  ....+.+|+.+++.                      
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~----------------------   69 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL----------------------   69 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHH----------------------
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHH----------------------
Confidence            358999999999999999999999999999999997654332  23568899999999                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+++.+|+||||| +|+|.+++..++++++..++.++.||+.||+|||++||+||||
T Consensus        70 --l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDi  138 (275)
T 3hyh_A           70 --LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL  138 (275)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             --CCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence              89999999999999999999999999 6799999998889999999999999999999999999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=6.2e-32  Score=203.42  Aligned_cols=125  Identities=23%  Similarity=0.370  Sum_probs=114.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.|.+.++||+|+||.||+|.++.+++.||||++..... .....+.+|+.+++.                       
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~-----------------------  127 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRD-----------------------  127 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHH-----------------------
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHh-----------------------
Confidence            35679999999999999999999999999999999976542 334668899999999                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||++++++|.+++.+|+|||||+||+|.+++.. +.+++..++.++.||+.||+|||++|||||||
T Consensus       128 -l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  196 (346)
T 4fih_A          128 -YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI  196 (346)
T ss_dssp             -CCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence             8999999999999999999999999999999998865 56999999999999999999999999999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.98  E-value=2e-31  Score=205.26  Aligned_cols=126  Identities=23%  Similarity=0.368  Sum_probs=114.7

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...+.|.+.+.||+|+||.||+|.++.+++.||||++..... .....+.+|+.+++.                      
T Consensus       148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~----------------------  204 (423)
T 4fie_A          148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRD----------------------  204 (423)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHH----------------------
T ss_pred             ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHh----------------------
Confidence            345679999999999999999999999999999999976542 234668899999999                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||++++++|.+++.+|+|||||+||+|.+++.. +.+++..++.++.||+.||+|||++|||||||
T Consensus       205 --l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDi  273 (423)
T 4fie_A          205 --YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI  273 (423)
T ss_dssp             --CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --CCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence              8999999999999999999999999999999998865 45999999999999999999999999999998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.98  E-value=1.5e-31  Score=200.80  Aligned_cols=120  Identities=28%  Similarity=0.386  Sum_probs=110.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|.+.++||+|+||.||+|.++.+++.||||+++....      ..+|+.++..                        
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~------------------------  106 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAG------------------------  106 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTT------------------------
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHh------------------------
Confidence            4578999999999999999999999999999999965421      2457777777                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++.+|+|||||+||+|.+++...+++++..++.++.||+.||+|||++|||||||
T Consensus       107 l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  176 (336)
T 4g3f_A          107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV  176 (336)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            8999999999999999999999999999999999998889999999999999999999999999999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=1e-31  Score=199.35  Aligned_cols=125  Identities=27%  Similarity=0.530  Sum_probs=106.6

Q ss_pred             cceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ++|++++.||+|+||.||+|++.   .+++.||||++.+...... ...+.+|+.++..                     
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~---------------------   82 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE---------------------   82 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCC---------------------
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHH---------------------
Confidence            57999999999999999999984   4678999999976543222 2345566666665                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+++.+|+|||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||
T Consensus        83 ---l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  152 (304)
T 3ubd_A           83 ---VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDL  152 (304)
T ss_dssp             ---CCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             ---CCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence               8999999999999999999999999999999999998889999999999999999999999999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=8.7e-31  Score=193.33  Aligned_cols=127  Identities=23%  Similarity=0.367  Sum_probs=112.0

Q ss_pred             cccce-EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++| .+.+.||+|+||.||+|.+..+++.||+|.+....... ....+.+|+.+++.                     
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~---------------------   81 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG---------------------   81 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHT---------------------
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh---------------------
Confidence            34455 78889999999999999999999999999997654322 23567889999998                     


Q ss_pred             cccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCC
Q psy13106        105 KERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR--YLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~Dl  177 (177)
                         ++||||++++++|.+    .+.+|+|||||++|+|.+++.+.+.+++..++.++.||+.||+|||++|  ||||||
T Consensus        82 ---l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDl  157 (290)
T 3fpq_A           82 ---LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL  157 (290)
T ss_dssp             ---CCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCC
T ss_pred             ---CCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEeccc
Confidence               899999999999864    3568999999999999999998888999999999999999999999999  999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=2.6e-30  Score=191.85  Aligned_cols=125  Identities=22%  Similarity=0.364  Sum_probs=106.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+++.||+|+||.||+|.++.+++.||||.+...........+.+|+.+++.                        +
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~------------------------l   60 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK------------------------L   60 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTT------------------------C
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHh------------------------C
Confidence            4699999999999999999999999999999999755433334567889999988                        8


Q ss_pred             CCCCceeeEEEEecCC------------eEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        109 THPNIVQLIETFEDKH------------KVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~------------~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                      +||||++++++|.+.+            ++|++||||++|+|.+++.....   .+...++.++.||+.||+|||++|||
T Consensus        61 ~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~Ii  140 (299)
T 4g31_A           61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLM  140 (299)
T ss_dssp             CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCc
Confidence            9999999999987543            47999999999999999987654   34567889999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       141 HRDl  144 (299)
T 4g31_A          141 HRDL  144 (299)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            9997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=4e-30  Score=197.54  Aligned_cols=126  Identities=25%  Similarity=0.421  Sum_probs=111.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.++|.+++.||+|+||.||+|.++.+++.||||+++...... ....+.+|+.+++.                      
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~----------------------  109 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKH----------------------  109 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHH----------------------
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHh----------------------
Confidence            4568999999999999999999999999999999996543222 22457789999998                      


Q ss_pred             ccCCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++..      .+.+|+|||||+ |+|.+++...+++++..++.++.||+.||.|||++|||||||
T Consensus       110 --l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDl  184 (398)
T 4b99_A          110 --FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDL  184 (398)
T ss_dssp             --CCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             --cCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCc
Confidence              899999999998763      367999999995 689999998889999999999999999999999999999997

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=6.9e-30  Score=189.48  Aligned_cols=126  Identities=21%  Similarity=0.373  Sum_probs=107.7

Q ss_pred             cccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+.|.+.+.||+|+||.||+|.+.     .++..||||.+.... ......+.+|+.++.+                  
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~------------------   71 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTN------------------   71 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTT------------------
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHh------------------
Confidence            3457999999999999999999875     357889999986432 2233568899999998                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHH
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-------------GSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                            ++||||+++++++.+++.+|+|||||++|+|.+++...             ..+++..+..++.||+.||+|||
T Consensus        72 ------l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH  145 (299)
T 4asz_A           72 ------LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA  145 (299)
T ss_dssp             ------CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                  89999999999999999999999999999999999754             25899999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      +++||||||
T Consensus       146 ~~~iiHRDl  154 (299)
T 4asz_A          146 SQHFVHRDL  154 (299)
T ss_dssp             HTTCCCSCC
T ss_pred             hCCcccCcc
Confidence            999999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=2.1e-29  Score=187.56  Aligned_cols=128  Identities=20%  Similarity=0.307  Sum_probs=109.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+.+++.+.||+|+||.||+|.+.     .+++.||||.+...........+.+|+.++.+                 
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~-----------------   85 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR-----------------   85 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHH-----------------
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHh-----------------
Confidence            34457899999999999999999864     35689999998655433344678899999999                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHHHH
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLEAV  164 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l  164 (177)
                             ++||||+++++++.+++.+++|||||++|+|.+++...                ..+++..+..++.||+.||
T Consensus        86 -------l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  158 (308)
T 4gt4_A           86 -------LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM  158 (308)
T ss_dssp             -------CCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHH
T ss_pred             -------CCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence                   89999999999999999999999999999999999643                3488999999999999999


Q ss_pred             HHHHhCCccccCC
Q psy13106        165 DYMHEARYLSKPR  177 (177)
Q Consensus       165 ~~LH~~giiH~Dl  177 (177)
                      +|||+++||||||
T Consensus       159 ~yLH~~~iiHRDL  171 (308)
T 4gt4_A          159 EYLSSHHVVHKDL  171 (308)
T ss_dssp             HHHHHTTCCCSCC
T ss_pred             HHHHhCCCCCCCc
Confidence            9999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=4.3e-29  Score=200.81  Aligned_cols=132  Identities=25%  Similarity=0.416  Sum_probs=113.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+++.||+|+||.||+|.++.+++.||||++.+......  ......|..++..++.                
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~----------------  248 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST----------------  248 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS----------------
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh----------------
Confidence            4456689999999999999999999999999999999986543222  2334445444443222                


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||++++++|.+.+.+|+|||||+||+|.+++...+.+++..++.|+.||+.||+|||++|||||||
T Consensus       249 -----~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDL  318 (689)
T 3v5w_A          249 -----GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  318 (689)
T ss_dssp             -----SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             -----CCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                 7899999999999999999999999999999999998889999999999999999999999999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=4.9e-29  Score=187.20  Aligned_cols=126  Identities=22%  Similarity=0.364  Sum_probs=109.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..++|.+.++||+|+||.||+|.+.     .+++.||||.+.... ......+.+|+.++.+                  
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~------------------   99 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTM------------------   99 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTT------------------
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHh------------------
Confidence            3457899999999999999999875     357899999986432 2233568899999998                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc---------------CCCCHHHHHHHHHHHHHHHHH
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK---------------GSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~qi~~~l~~  166 (177)
                            ++||||+++++++.+++.+|+|||||++|+|.+++...               +++++..+..++.||+.||.|
T Consensus       100 ------l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~y  173 (329)
T 4aoj_A          100 ------LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY  173 (329)
T ss_dssp             ------CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHH
Confidence                  89999999999999999999999999999999998753               358999999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||+++||||||
T Consensus       174 LH~~~iiHRDL  184 (329)
T 4aoj_A          174 LAGLHFVHRDL  184 (329)
T ss_dssp             HHHTTCCCSCC
T ss_pred             HhcCCeecccc
Confidence            99999999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=4e-29  Score=185.74  Aligned_cols=127  Identities=20%  Similarity=0.319  Sum_probs=107.4

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .+....+++.+.+.||+|+||.||+|.+.   ..+|||+++...... ....+.+|+.++++                  
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~------------------   88 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRK------------------   88 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTT------------------
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHh------------------
Confidence            34455678999999999999999999865   359999986433221 23567889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++. .+.+|+|||||++|+|.+++... .++++..+..++.||+.||+|||++|||||||
T Consensus        89 ------l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDl  158 (307)
T 3omv_A           89 ------TRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM  158 (307)
T ss_dssp             ------CCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred             ------CCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCcc
Confidence                  89999999999875 45689999999999999999754 56999999999999999999999999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=1.4e-28  Score=196.88  Aligned_cols=130  Identities=31%  Similarity=0.565  Sum_probs=116.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+.+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .....+.+|+.+++.                   
T Consensus       151 ~~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~-------------------  210 (573)
T 3uto_A          151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSV-------------------  210 (573)
T ss_dssp             BSSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHH-------------------
T ss_pred             CCCcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHh-------------------
Confidence            344556789999999999999999999999999999999965432 223567889999998                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||++++++|.+++.+|++||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||
T Consensus       211 -----l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDl  281 (573)
T 3uto_A          211 -----LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL  281 (573)
T ss_dssp             -----TCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----CCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence                 8999999999999999999999999999999999864 457999999999999999999999999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=2.9e-28  Score=185.23  Aligned_cols=123  Identities=15%  Similarity=0.265  Sum_probs=108.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+.++|.+.+.||+|+||.||+|.++   .+++.||+|.+....   ....+.+|+.++...                  
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~------------------   76 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVA------------------   76 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHT------------------
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHh------------------
Confidence            46678999999999999999999876   357899999885432   335677899888872                  


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           .+||||++++++|.+++++|+|||||++++|.+++.   .+++.+++.++.||+.||+|||++|||||||
T Consensus        77 -----~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDi  143 (361)
T 4f9c_A           77 -----GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDV  143 (361)
T ss_dssp             -----CSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -----cCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcC
Confidence                 269999999999999999999999999999999883   4899999999999999999999999999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.95  E-value=5.6e-28  Score=182.91  Aligned_cols=129  Identities=21%  Similarity=0.295  Sum_probs=108.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCC-----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENG-----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....++|.+.+.||+|+||.||+|.+..++     +.||||.+...........+.+|+.++.+                
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~----------------  123 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH----------------  123 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH----------------
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHH----------------
Confidence            345678999999999999999999987653     57999998655433334568889999988                


Q ss_pred             CcccccccCCC-CCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHH
Q psy13106        100 SNDKDKERLTH-PNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVL  161 (177)
Q Consensus       100 ~~~~~~~~~~h-~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~  161 (177)
                              +.| |||+++++++.+ ++.+|+|||||++|+|.+++...                ..+++..+..++.||+
T Consensus       124 --------l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia  195 (353)
T 4ase_A          124 --------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA  195 (353)
T ss_dssp             --------HCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHH
T ss_pred             --------cCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHH
Confidence                    545 899999998865 46799999999999999999753                2378999999999999


Q ss_pred             HHHHHHHhCCccccCC
Q psy13106        162 EAVDYMHEARYLSKPR  177 (177)
Q Consensus       162 ~~l~~LH~~giiH~Dl  177 (177)
                      .||+|||+++||||||
T Consensus       196 ~gl~yLH~~~iiHRDL  211 (353)
T 4ase_A          196 KGMEFLASRKCIHRDL  211 (353)
T ss_dssp             HHHHHHHHTTCCCSCC
T ss_pred             HHHHhHhhCCeecCcc
Confidence            9999999999999997

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=2.2e-27  Score=175.29  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=114.3

Q ss_pred             hhhccCCCCCcccCc-ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhccc
Q psy13106         11 KKLKKDGKDNEIKGP-SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQS   87 (177)
Q Consensus        11 ~~~~~~~~~~~~~~~-~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~   87 (177)
                      .+...........+. .+.++|.+.+.||.|+||.||+|.+..+++.||||++.......  ....+.+|+.++..    
T Consensus        12 ~~~~~~~~~~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~----   87 (286)
T 3uqc_A           12 ESSAPPDDVQLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSR----   87 (286)
T ss_dssp             --------CCCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHT----
T ss_pred             cCCCCCCCCcCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhc----
Confidence            333444445556666 77789999999999999999999999999999999987543221  12556778887777    


Q ss_pred             ccccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy13106         88 VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~L  167 (177)
                                          ++||||+++++++.+++..|+||||+++++|.+++...  ....++..++.||+.||+||
T Consensus        88 --------------------l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~l  145 (286)
T 3uqc_A           88 --------------------IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAA  145 (286)
T ss_dssp             --------------------CCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred             --------------------CCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHH
Confidence                                89999999999999999999999999999999998543  45667888999999999999


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |++||+||||
T Consensus       146 H~~givH~Di  155 (286)
T 3uqc_A          146 HRAGVALSID  155 (286)
T ss_dssp             HHTTCCCCCC
T ss_pred             HHCCCccCCC
Confidence            9999999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=9.6e-27  Score=177.00  Aligned_cols=132  Identities=34%  Similarity=0.658  Sum_probs=119.0

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-----chhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-----EDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .....+.++|.+.+.||.|+||.||+|.+..+++.+|+|++........     ...+.+|+.++..             
T Consensus         5 ~~~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~-------------   71 (361)
T 2yab_A            5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ-------------   71 (361)
T ss_dssp             CBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTT-------------
T ss_pred             ccCCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHh-------------
Confidence            3445677899999999999999999999999999999999976543221     2567889999988             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                 ++||||+++++++.+...+|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+|||
T Consensus        72 -----------l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  140 (361)
T 2yab_A           72 -----------VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (361)
T ss_dssp             -----------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             -----------CCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence                       899999999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       141 l  141 (361)
T 2yab_A          141 L  141 (361)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=5.5e-27  Score=174.43  Aligned_cols=119  Identities=24%  Similarity=0.318  Sum_probs=98.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHH--HHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK--VLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|.+.+.||+|+||.||+|.+  +++.||||.+....    ......|.+  .+..                      
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~----------------------   53 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVM----------------------   53 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTT----------------------
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhc----------------------
Confidence            46799999999999999999987  48899999986432    122333333  3333                      


Q ss_pred             ccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------Ccc
Q psy13106        106 ERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA--------RYL  173 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------gii  173 (177)
                        ++||||+++++++.+++    .+|+|||||++|+|.+++... +++......++.|++.||+|||++        +||
T Consensus        54 --l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~Ii  130 (303)
T 3hmm_A           54 --LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA  130 (303)
T ss_dssp             --CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEE
T ss_pred             --CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEe
Confidence              79999999999987543    589999999999999999765 489999999999999999999987        999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       131 HRDl  134 (303)
T 3hmm_A          131 HRDL  134 (303)
T ss_dssp             CSCC
T ss_pred             eccC
Confidence            9997

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.95  E-value=1.7e-26  Score=173.55  Aligned_cols=129  Identities=37%  Similarity=0.630  Sum_probs=116.3

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||||++....... ....+.+|+.+++.                    
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   70 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI--------------------   70 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH--------------------
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHh--------------------
Confidence            345668999999999999999999999999999999997654322 23557789999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+.+|+||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        71 ----l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl  140 (328)
T 3fe3_A           71 ----LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL  140 (328)
T ss_dssp             ----CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ----CCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCC
Confidence                8999999999999999999999999999999999988888999999999999999999999999999997

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=2.2e-26  Score=170.39  Aligned_cols=132  Identities=29%  Similarity=0.405  Sum_probs=118.1

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..+..+.++|++.+.||.|+||.||+|.+..+++.+|+|.+.......  ....+.+|+.++..                
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~----------------   67 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ----------------   67 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTT----------------
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhc----------------
Confidence            456788899999999999999999999999999999999986543222  12456778888877                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.+++.+|++|||+++++|.+++...+++++..+..++.|++.||.|||++||+||||
T Consensus        68 --------l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dl  137 (294)
T 4eqm_A           68 --------LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDI  137 (294)
T ss_dssp             --------CCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             --------CCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                    8999999999999999999999999999999999998888999999999999999999999999999997

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=1.3e-26  Score=176.29  Aligned_cols=131  Identities=41%  Similarity=0.663  Sum_probs=117.4

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.++|.+.+.||.|+||.||+|.+..+++.+|+|++....... ....+.+|+.+++.                  
T Consensus        23 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~------------------   84 (362)
T 2bdw_A           23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK------------------   84 (362)
T ss_dssp             -CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHH------------------
T ss_pred             CCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHh------------------
Confidence            44566778999999999999999999999999999999997654322 22567789999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+.+..|++||++++++|.+.+.....+++..+..++.||+.||.|||++||+||||
T Consensus        85 ------l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dl  154 (362)
T 2bdw_A           85 ------LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNL  154 (362)
T ss_dssp             ------CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ------CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence                  8999999999999999999999999999999999988888999999999999999999999999999997

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=3.2e-26  Score=173.69  Aligned_cols=131  Identities=24%  Similarity=0.477  Sum_probs=112.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .....++|.+.+.||.|+||.||+|.++.+++.||+|++.+....  ........|..++...                 
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~-----------------   80 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA-----------------   80 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHT-----------------
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhc-----------------
Confidence            344567899999999999999999999999999999999764321  2234567788888762                 


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            .+||||+++++++.+.+.+|+|||||++++|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        81 ------~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  150 (353)
T 3txo_A           81 ------RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL  150 (353)
T ss_dssp             ------TTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ------cCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence                  2799999999999999999999999999999999988888999999999999999999999999999997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.94  E-value=1.9e-26  Score=172.85  Aligned_cols=128  Identities=32%  Similarity=0.477  Sum_probs=113.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|++.+.||.|+||.||+|.+..+++.||+|++...........+.+|+.+++.                      
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~----------------------   61 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM----------------------   61 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHH----------------------
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHh----------------------
Confidence            3567899999999999999999999999999999999755443344667889999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+.+..|++||||++++|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        62 --l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dl  131 (323)
T 3tki_A           62 --LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI  131 (323)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             --CCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence              8999999999999999999999999999999999988878999999999999999999999999999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.94  E-value=4.7e-26  Score=170.89  Aligned_cols=131  Identities=34%  Similarity=0.638  Sum_probs=118.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhccccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ....+.++|.+.+.||.|+||.||+|.+..+++.+|+|++.......     ....+.+|+.++..              
T Consensus         5 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~--------------   70 (326)
T 2y0a_A            5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE--------------   70 (326)
T ss_dssp             BCSCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHH--------------
T ss_pred             ccCCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHh--------------
Confidence            34567789999999999999999999999999999999997654322     23567889999998              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                ++||||+++++++.+...++++||++++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        71 ----------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dl  140 (326)
T 2y0a_A           71 ----------IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL  140 (326)
T ss_dssp             ----------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----------CCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCC
Confidence                      8999999999999999999999999999999999988888999999999999999999999999999997

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.94  E-value=6e-26  Score=167.21  Aligned_cols=135  Identities=37%  Similarity=0.640  Sum_probs=119.3

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ........+.++|.+.+.||.|+||.||+|.+..++..+++|.+...........+.+|+.+++.               
T Consensus        12 ~~~~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~---------------   76 (285)
T 3is5_A           12 ENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS---------------   76 (285)
T ss_dssp             -CCEESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHT---------------
T ss_pred             ccCCCCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHh---------------
Confidence            34445557788999999999999999999999999999999999766544444678899999988               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                               ++||||+++++++.+....+++||++++++|.+++...    ..+++..+..++.||+.||.|||++||+|
T Consensus        77 ---------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH  147 (285)
T 3is5_A           77 ---------LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH  147 (285)
T ss_dssp             ---------CCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ---------CCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence                     89999999999999999999999999999999988543    56999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       148 ~di  150 (285)
T 3is5_A          148 KDL  150 (285)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=6.2e-26  Score=171.09  Aligned_cols=126  Identities=27%  Similarity=0.497  Sum_probs=114.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|.+.+.||+|+||.||+|.++.+++.||+|++.+...  ......+.+|..++..                      
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~----------------------   61 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN----------------------   61 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS----------------------
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHh----------------------
Confidence            4689999999999999999999999999999999976532  2233567788888887                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+.+.+|+||||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        62 --l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  131 (337)
T 1o6l_A           62 --TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  131 (337)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             --CCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcC
Confidence              8999999999999999999999999999999999988888999999999999999999999999999997

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.94  E-value=8.5e-26  Score=171.76  Aligned_cols=129  Identities=29%  Similarity=0.517  Sum_probs=116.7

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      +.....++|.+.+.||.|+||.||++.+..+++.||+|.+....  .....+.+|+.+++.                   
T Consensus        14 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~-------------------   72 (361)
T 3uc3_A           14 PIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRS-------------------   72 (361)
T ss_dssp             CCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHH-------------------
T ss_pred             cCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHh-------------------
Confidence            34455679999999999999999999999999999999986533  233567889998888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+...+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        73 -----l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dl  142 (361)
T 3uc3_A           73 -----LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDL  142 (361)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCC
T ss_pred             -----CCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                 8999999999999999999999999999999999988888999999999999999999999999999997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.94  E-value=5e-26  Score=179.11  Aligned_cols=136  Identities=35%  Similarity=0.646  Sum_probs=120.4

Q ss_pred             CCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccc
Q psy13106         18 KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        18 ~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .+.......+.++|.+.+.||.|+||.||+|.+..+++.||||++....... ....+.+|+.+++.             
T Consensus        11 ~~~~~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-------------   77 (486)
T 3mwu_A           11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK-------------   77 (486)
T ss_dssp             ---CTTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHH-------------
T ss_pred             CccccccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHh-------------
Confidence            3344455678889999999999999999999999999999999997654322 33567899999999             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                 ++||||+++++++.+...+|++||+|.+++|.+.+.....+++..+..++.||+.||.|||++||+|||
T Consensus        78 -----------l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  146 (486)
T 3mwu_A           78 -----------LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD  146 (486)
T ss_dssp             -----------CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             -----------CCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence                       899999999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       147 l  147 (486)
T 3mwu_A          147 L  147 (486)
T ss_dssp             C
T ss_pred             C
Confidence            7

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=6.2e-26  Score=173.77  Aligned_cols=131  Identities=21%  Similarity=0.482  Sum_probs=117.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ......++|.+.+.||.|+||.||+|.+..+++.||+|++......  .....+.+|+.++..                 
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~-----------------   71 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG-----------------   71 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-----------------
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHh-----------------
Confidence            3455677999999999999999999999999999999999764322  223567789999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+...+|+||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        72 -------l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDl  141 (384)
T 4fr4_A           72 -------LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDM  141 (384)
T ss_dssp             -------CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -------CCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence                   8999999999999999999999999999999999998888999999999999999999999999999997

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.94  E-value=9.5e-26  Score=168.53  Aligned_cols=130  Identities=24%  Similarity=0.443  Sum_probs=114.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|.+.+.||.|+||.||+|.+..+++.||||++...........+.+|+.++..                    
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------------   63 (319)
T 4euu_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK--------------------   63 (319)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHH--------------------
T ss_pred             ccCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHh--------------------
Confidence            346678999999999999999999999999999999999765444444667789999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCC--eEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++....  .++++|||+++++|.+++.....   +++..+..++.||+.||+|||++||+||||
T Consensus        64 ----l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl  138 (319)
T 4euu_A           64 ----LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNI  138 (319)
T ss_dssp             ----CCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----cCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence                89999999999987654  78999999999999999976543   899999999999999999999999999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.94  E-value=1.1e-25  Score=172.92  Aligned_cols=130  Identities=21%  Similarity=0.436  Sum_probs=114.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||+|+||.||+|.++.+++.+|+|++.+.....  ....+..|..++...                  
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~------------------  109 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA------------------  109 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHH------------------
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhc------------------
Confidence            344568999999999999999999999999999999997654322  234567888888762                  


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           .+||||+++++++.+...+|+||||+++++|..++...+.+++..++.++.||+.||+|||++||+||||
T Consensus       110 -----~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDL  179 (396)
T 4dc2_A          110 -----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL  179 (396)
T ss_dssp             -----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             -----CCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence                 3799999999999999999999999999999999988888999999999999999999999999999997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=4.3e-26  Score=177.64  Aligned_cols=131  Identities=40%  Similarity=0.595  Sum_probs=115.7

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.++|.+.+.||.|+||.||+|.+..+++.+|+|++....... ....+.+|+.+++.                  
T Consensus         5 ~~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~------------------   66 (444)
T 3soa_A            5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL------------------   66 (444)
T ss_dssp             --CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHH------------------
T ss_pred             ccccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHh------------------
Confidence            44566789999999999999999999999999999999997654322 23567889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+.+..|++||+|++++|.+.+.....+++..+..++.||+.||.|||++||+||||
T Consensus        67 ------l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDl  136 (444)
T 3soa_A           67 ------LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNL  136 (444)
T ss_dssp             ------CCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ------CCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                  8999999999999999999999999999999999998888999999999999999999999999999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.94  E-value=8.9e-26  Score=170.72  Aligned_cols=130  Identities=25%  Similarity=0.459  Sum_probs=113.3

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||+|+||.||+|.++.+++.||+|++.+...  .........|..++...                  
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~------------------   74 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA------------------   74 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH------------------
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhc------------------
Confidence            3456789999999999999999999999999999999976532  22334566777777762                  


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           .+||||+++++++.+...+|+||||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        75 -----~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  144 (345)
T 1xjd_A           75 -----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL  144 (345)
T ss_dssp             -----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             -----CCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence                 3899999999999999999999999999999999988888999999999999999999999999999997

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.94  E-value=9.3e-26  Score=168.88  Aligned_cols=127  Identities=27%  Similarity=0.535  Sum_probs=114.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++|.+.+.||.|+||.||+|.+..+++.||+|++.+....  .....+.+|..++..                     
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~---------------------   62 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI---------------------   62 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS---------------------
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhh---------------------
Confidence            346899999999999999999999999999999999765322  223456778888877                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+...+|++|||+++++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        63 ---l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  132 (318)
T 1fot_A           63 ---VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL  132 (318)
T ss_dssp             ---CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             ---CCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence               8999999999999999999999999999999999998888999999999999999999999999999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.94  E-value=1.3e-25  Score=170.19  Aligned_cols=130  Identities=28%  Similarity=0.544  Sum_probs=116.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .....++|.+.+.||.|+||.||+|.+..+++.||+|++.+....  .....+.+|..++..                  
T Consensus        36 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~------------------   97 (350)
T 1rdq_E           36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA------------------   97 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT------------------
T ss_pred             cCCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHh------------------
Confidence            344567899999999999999999999999999999999765432  223566778888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+...+|+||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        98 ------l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  167 (350)
T 1rdq_E           98 ------VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL  167 (350)
T ss_dssp             ------CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ------CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence                  8999999999999999999999999999999999988888999999999999999999999999999997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.94  E-value=1.9e-25  Score=168.98  Aligned_cols=128  Identities=22%  Similarity=0.448  Sum_probs=113.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++|.+.+.||+|+||.||+|.++.+++.||+|++.+......  ...+.+|..++...                    
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~--------------------   66 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--------------------   66 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHT--------------------
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhc--------------------
Confidence            45689999999999999999999999999999999976543222  24466788888762                    


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .+||||+++++++.+...+|+||||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        67 ---~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  136 (345)
T 3a8x_A           67 ---SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL  136 (345)
T ss_dssp             ---TTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ---CCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence               2799999999999999999999999999999999988888999999999999999999999999999997

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=1.1e-25  Score=177.80  Aligned_cols=133  Identities=35%  Similarity=0.626  Sum_probs=115.5

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc------------ccchhHHHHHHHHHhhcccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK------------GKEDSLENEIKVLRRFSQSV   88 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~------------~~~~~~~~e~~~~~~~~~~~   88 (177)
                      ......+.++|.+++.||.|+||.||+|.+..+++.+|+|++......            .....+.+|+.+++.     
T Consensus        28 ~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----  102 (504)
T 3q5i_A           28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS-----  102 (504)
T ss_dssp             CEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHT-----
T ss_pred             eccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHh-----
Confidence            344556778999999999999999999999999999999999764422            123567789999988     


Q ss_pred             cccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         89 HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                         ++||||+++++++.+...+|+|||||++++|.+++.....+++..+..++.||+.||.|||
T Consensus       103 -------------------l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH  163 (504)
T 3q5i_A          103 -------------------LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH  163 (504)
T ss_dssp             -------------------CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                               8999999999999999999999999999999999988888999999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       164 ~~~ivH~Dl  172 (504)
T 3q5i_A          164 KHNIVHRDI  172 (504)
T ss_dssp             HTTEECSCC
T ss_pred             HCCeEeCCC
Confidence            999999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=6.3e-26  Score=171.37  Aligned_cols=126  Identities=33%  Similarity=0.597  Sum_probs=111.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.++|.+.+.||.|+||.||+|.++.+++.||+|++....     .....|+.++...                   
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~E~~~l~~~-------------------   72 (342)
T 2qr7_A           17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-----RDPTEEIEILLRY-------------------   72 (342)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-----CCCHHHHHHHHHH-------------------
T ss_pred             ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-----CChHHHHHHHHHh-------------------
Confidence            3456789999999999999999999999999999999986543     2235677777662                   


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          .+||||+++++++.+...+|+|||||++++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus        73 ----~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDl  142 (342)
T 2qr7_A           73 ----GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL  142 (342)
T ss_dssp             ----TTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----cCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccC
Confidence                3799999999999999999999999999999999988888999999999999999999999999999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.94  E-value=2.3e-25  Score=170.68  Aligned_cols=135  Identities=24%  Similarity=0.381  Sum_probs=117.1

Q ss_pred             CCcccCcccccceEEEeeeccc--ceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhccccccccccc
Q psy13106         19 DNEIKGPSIEEKYILKELLGTG--AFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g--~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      +....-....++|.+++.||.|  +||.||+|.+..+++.||||.+........ ...+.+|+.+++.            
T Consensus        15 ~~~s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~------------   82 (389)
T 3gni_B           15 QGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKL------------   82 (389)
T ss_dssp             C--CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH------------
T ss_pred             hhhhcccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHh------------
Confidence            3334444556789999999999  999999999999999999999976543222 2556779999988            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                  ++||||+++++++.+.+.+|+|||||++++|.+++...  ..+++..++.++.||+.||+|||++||+
T Consensus        83 ------------l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv  150 (389)
T 3gni_B           83 ------------FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV  150 (389)
T ss_dssp             ------------CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             ------------CCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence                        89999999999999999999999999999999999765  5699999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       151 HrDl  154 (389)
T 3gni_B          151 HRSV  154 (389)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            9997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=8.1e-26  Score=171.25  Aligned_cols=130  Identities=36%  Similarity=0.600  Sum_probs=113.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ...+.++|.+.+.||.|+||.||+|.+..+++.||||++.......    ....+.+|+.++..                
T Consensus        19 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~----------------   82 (351)
T 3c0i_A           19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM----------------   82 (351)
T ss_dssp             -CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHH----------------
T ss_pred             CCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHh----------------
Confidence            3456678999999999999999999999999999999997543221    23567889999988                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                              ++||||+++++++.+.+.+|+|||||++++|.+.+...    ..+++..+..++.||+.||.|||++||+||
T Consensus        83 --------l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHr  154 (351)
T 3c0i_A           83 --------LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR  154 (351)
T ss_dssp             --------CCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             --------CCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence                    89999999999999999999999999999998877543    248999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       155 Dl  156 (351)
T 3c0i_A          155 DV  156 (351)
T ss_dssp             CC
T ss_pred             cC
Confidence            97

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.7e-25  Score=167.58  Aligned_cols=126  Identities=25%  Similarity=0.448  Sum_probs=113.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.+|+|.+....  .....+.+|+.+++.                      
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~----------------------   57 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNI----------------------   57 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHH----------------------
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHh----------------------
Confidence            35679999999999999999999999999999999986432  233457789999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+.+.++++||||++++|.+++.... .+++..+..++.||+.||.|||++||+||||
T Consensus        58 --l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dl  128 (321)
T 1tki_A           58 --ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI  128 (321)
T ss_dssp             --SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --CCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence              899999999999999999999999999999999997653 6999999999999999999999999999997

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=1.8e-25  Score=169.30  Aligned_cols=128  Identities=41%  Similarity=0.668  Sum_probs=110.5

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+.+.++|.+.+.||.|+||.||+|.+..+++.||||++....   ....+.+|+.++..                   
T Consensus        47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~-------------------  104 (349)
T 2w4o_A           47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLR-------------------  104 (349)
T ss_dssp             BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHH-------------------
T ss_pred             ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHh-------------------
Confidence            34566778999999999999999999999999999999986432   23456778888888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           +.||||+++++++.+...++++|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus       105 -----l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Di  174 (349)
T 2w4o_A          105 -----LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL  174 (349)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             -----CCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence                 8999999999999999999999999999999999988888999999999999999999999999999997

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=1.7e-25  Score=167.39  Aligned_cols=132  Identities=33%  Similarity=0.634  Sum_probs=118.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .....+.++|.+.+.||.|+||.||+|.+..+++.+|+|++.......     ....+.+|+.++..             
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~-------------   71 (321)
T 2a2a_A            5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ-------------   71 (321)
T ss_dssp             CBCSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHH-------------
T ss_pred             ccchhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHh-------------
Confidence            344567789999999999999999999999999999999997654322     13457889999988             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                 +.||||+++++++.+...++++||++++++|.+++.....+++..+..++.|++.||.|||++||+|||
T Consensus        72 -----------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~d  140 (321)
T 2a2a_A           72 -----------VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (321)
T ss_dssp             -----------CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             -----------CCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence                       899999999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       141 i  141 (321)
T 2a2a_A          141 L  141 (321)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.94  E-value=2.2e-25  Score=165.25  Aligned_cols=128  Identities=26%  Similarity=0.430  Sum_probs=114.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.                    
T Consensus        15 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~--------------------   73 (297)
T 3fxz_A           15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRE--------------------   73 (297)
T ss_dssp             SSCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHH--------------------
T ss_pred             cCChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhc--------------------
Confidence            33456789999999999999999999999999999999865432 234567788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++...+.+|++|||+++++|.+++... .+++..+..++.|++.||.|||++||+||||
T Consensus        74 ----l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dl  142 (297)
T 3fxz_A           74 ----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (297)
T ss_dssp             ----CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----CCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCC
Confidence                89999999999999999999999999999999998765 5999999999999999999999999999997

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.94  E-value=1.3e-25  Score=171.46  Aligned_cols=132  Identities=27%  Similarity=0.507  Sum_probs=108.1

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ......++|.+.+.||+|+||.||+|.++.+++.||+|++.+......  ...+..|..++                   
T Consensus        32 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l-------------------   92 (373)
T 2r5t_A           32 NPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL-------------------   92 (373)
T ss_dssp             CTTCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC-------------------
T ss_pred             CCCCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH-------------------
Confidence            344556789999999999999999999999999999999976543221  12222332221                   


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          .+.++||||+++++++.+.+.+|+||||+++++|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        93 ----l~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  165 (373)
T 2r5t_A           93 ----LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL  165 (373)
T ss_dssp             ----BCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ----HHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence                2237999999999999999999999999999999999988888999999999999999999999999999997

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=1.5e-25  Score=168.31  Aligned_cols=132  Identities=20%  Similarity=0.314  Sum_probs=110.9

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..+.....++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----------------   89 (329)
T 3gbz_A           26 AAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE----------------   89 (329)
T ss_dssp             ------CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGG----------------
T ss_pred             cCCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHH----------------
Confidence            3445666779999999999999999999999999999999986543222 22456788888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.++..+++||||++ ++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        90 --------l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dl  158 (329)
T 3gbz_A           90 --------LQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDL  158 (329)
T ss_dssp             --------CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --------cCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCC
Confidence                    899999999999999999999999996 599999998888999999999999999999999999999997

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.93  E-value=1.5e-25  Score=176.72  Aligned_cols=131  Identities=39%  Similarity=0.631  Sum_probs=113.1

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.++|.+++.||.|+||.||+|.+..++..+|+|++....... ....+.+|+.+++.                  
T Consensus        31 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~------------------   92 (494)
T 3lij_A           31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL------------------   92 (494)
T ss_dssp             CBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTT------------------
T ss_pred             CCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHh------------------
Confidence            44456678999999999999999999999999999999997654322 34567889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+...+|+|||||++++|.+.+.....+++..+..++.||+.||.|||++||+||||
T Consensus        93 ------l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl  162 (494)
T 3lij_A           93 ------LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDL  162 (494)
T ss_dssp             ------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ------CCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence                  8999999999999999999999999999999999988888999999999999999999999999999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.4e-25  Score=168.21  Aligned_cols=133  Identities=18%  Similarity=0.309  Sum_probs=114.2

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ........++|.+.+.||.|+||.||+|.+..+++   .||||.+...........+.+|+.++..              
T Consensus        41 ~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------  106 (325)
T 3kul_A           41 SFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ--------------  106 (325)
T ss_dssp             --CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTT--------------
T ss_pred             hhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHh--------------
Confidence            34455667799999999999999999999986554   5999998654333334567889988888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                ++||||+++++++.+.+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+|||
T Consensus       107 ----------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  176 (325)
T 3kul_A          107 ----------FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD  176 (325)
T ss_dssp             ----------CCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ----------CCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence                      89999999999999999999999999999999999654 5699999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       177 l  177 (325)
T 3kul_A          177 L  177 (325)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.93  E-value=2.2e-25  Score=172.08  Aligned_cols=128  Identities=26%  Similarity=0.450  Sum_probs=113.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||+|+||.||+|.+..+++.||+|++.+....  .....+..|..++..                   
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~-------------------  125 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-------------------  125 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHH-------------------
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHh-------------------
Confidence            34567899999999999999999999999999999999764321  233557788888888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+...+|+|||||++|+|.+++... .+++..++.++.||+.||+|||++||+||||
T Consensus       126 -----l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDL  194 (410)
T 3v8s_A          126 -----ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDV  194 (410)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence                 89999999999999999999999999999999988654 5999999999999999999999999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.93  E-value=1.7e-25  Score=168.67  Aligned_cols=128  Identities=33%  Similarity=0.566  Sum_probs=115.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||+|++.......  ....+.+|+.+++.                   
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-------------------   65 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL-------------------   65 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTT-------------------
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHh-------------------
Confidence            345678999999999999999999999999999999997543322  23567889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+.+.++++|||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        66 -----l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dl  134 (336)
T 3h4j_B           66 -----LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL  134 (336)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             -----CCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence                 89999999999999999999999999 7899999988888999999999999999999999999999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=1.5e-25  Score=175.87  Aligned_cols=132  Identities=32%  Similarity=0.603  Sum_probs=118.5

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..+....++|.+.+.||.|+||.||+|.+..+++.||||++.......  ....+.+|+.+++.                
T Consensus         9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~----------------   72 (476)
T 2y94_A            9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL----------------   72 (476)
T ss_dssp             CCSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTT----------------
T ss_pred             cCCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHh----------------
Confidence            345566789999999999999999999999999999999997654322  23567889988888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.+...+|++|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        73 --------l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDL  142 (476)
T 2y94_A           73 --------FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDL  142 (476)
T ss_dssp             --------CCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             --------CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccc
Confidence                    8999999999999999999999999999999999988888999999999999999999999999999997

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.93  E-value=2.3e-25  Score=175.14  Aligned_cols=131  Identities=40%  Similarity=0.697  Sum_probs=118.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....+.++|.+.+.||.|+||.||+|.+..+++.||||++.......  ....+.+|+.+++.                 
T Consensus        20 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~-----------------   82 (484)
T 3nyv_A           20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ-----------------   82 (484)
T ss_dssp             CCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTT-----------------
T ss_pred             CCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHh-----------------
Confidence            44567789999999999999999999999999999999997654322  23567889999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+.+.+|++||+|.+++|.+.+.....+++..+..++.||+.||.|||++||+||||
T Consensus        83 -------l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl  152 (484)
T 3nyv_A           83 -------LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL  152 (484)
T ss_dssp             -------CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -------CCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence                   8999999999999999999999999999999999988888999999999999999999999999999997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.93  E-value=5.2e-25  Score=161.74  Aligned_cols=129  Identities=42%  Similarity=0.673  Sum_probs=116.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.+|+|++....... ....+.+|+.++..                    
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--------------------   61 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--------------------   61 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHH--------------------
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHH--------------------
Confidence            356789999999999999999999999999999999997654322 22556788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+..+++||++++++|.+.+.....+++..+..++.|++.||.|||++||+||||
T Consensus        62 ----l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di  131 (284)
T 3kk8_A           62 ----LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNL  131 (284)
T ss_dssp             ----CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----cCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCC
Confidence                8999999999999999999999999999999999988888999999999999999999999999999997

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=2.1e-25  Score=171.44  Aligned_cols=130  Identities=24%  Similarity=0.443  Sum_probs=114.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +....++|.+.+.||.|+||.||+|.+..+++.||||++...........+.+|+.++..                    
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~--------------------   63 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK--------------------   63 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHH--------------------
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHh--------------------
Confidence            446678999999999999999999999999999999999765444444667789999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCC--eEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+..  ..+++||||++++|.+++.....   +++..++.++.||+.||+|||++||+||||
T Consensus        64 ----l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  138 (396)
T 4eut_A           64 ----LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNI  138 (396)
T ss_dssp             ----CCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----cCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCc
Confidence                89999999999988654  78999999999999999875433   899999999999999999999999999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=3.7e-25  Score=172.02  Aligned_cols=128  Identities=25%  Similarity=0.454  Sum_probs=114.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++.+....  .....+..|..++..                    
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~--------------------  130 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN--------------------  130 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHH--------------------
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHh--------------------
Confidence            4457899999999999999999999999999999999764322  223457788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+.+|+|||||++|+|.+++.. ...+++..++.++.||+.||.|||++|||||||
T Consensus       131 ----~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDL  201 (437)
T 4aw2_A          131 ----GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDI  201 (437)
T ss_dssp             ----SCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----CCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence                8999999999999999999999999999999999986 467999999999999999999999999999997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.93  E-value=4.9e-25  Score=161.44  Aligned_cols=128  Identities=39%  Similarity=0.666  Sum_probs=116.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..++..+++|.+..... .....+.+|+.++..                     
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~---------------------   62 (277)
T 3f3z_A            5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKS---------------------   62 (277)
T ss_dssp             -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHT---------------------
T ss_pred             hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHh---------------------
Confidence            4567799999999999999999999999999999999875432 234667889999988                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+....+++|||+++++|.+++.....+++..+..++.|++.||.|||++||+||||
T Consensus        63 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl  132 (277)
T 3f3z_A           63 ---LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDL  132 (277)
T ss_dssp             ---CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---CCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence               8999999999999999999999999999999999988888999999999999999999999999999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=2.9e-25  Score=168.36  Aligned_cols=130  Identities=24%  Similarity=0.390  Sum_probs=112.3

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||+|++.+....  ........|..++...                  
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~------------------   77 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP------------------   77 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCT------------------
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhc------------------
Confidence            34456899999999999999999999999999999999765321  2234566777777651                  


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ..||+|+++++++.+.+.+|+||||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        78 -----~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  147 (353)
T 2i0e_A           78 -----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL  147 (353)
T ss_dssp             -----TCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             -----CCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccC
Confidence                 2799999999999999999999999999999999988888999999999999999999999999999997

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=4.5e-25  Score=165.64  Aligned_cols=130  Identities=26%  Similarity=0.484  Sum_probs=109.6

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhccccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .....++|.+.+.||.|+||.||++.+.   .+++.+|+|++......   .....+.+|+.++..              
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~--------------   77 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE--------------   77 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHH--------------
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHh--------------
Confidence            3455678999999999999999999985   67899999999754321   122456778888888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                ++||||+++++++...+.+|++|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        78 ----------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dl  147 (327)
T 3a62_A           78 ----------VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDL  147 (327)
T ss_dssp             ----------CCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ----------CCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccC
Confidence                      8999999999999999999999999999999999988888999999999999999999999999999997

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.93  E-value=3.8e-25  Score=170.79  Aligned_cols=129  Identities=27%  Similarity=0.487  Sum_probs=114.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||+|+||.||+|.++.+++.||+|++.+...  ......+..|..++..                   
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~-------------------  117 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-------------------  117 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHH-------------------
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-------------------
Confidence            3456789999999999999999999999999999999975432  1223457788888888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+.+.+|+||||+++|+|.+++...+ .+++..++.++.||+.||+|||++||+||||
T Consensus       118 -----~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDL  188 (412)
T 2vd5_A          118 -----GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDI  188 (412)
T ss_dssp             -----SCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----cCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence                 899999999999999999999999999999999998754 6999999999999999999999999999997

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.93  E-value=1e-24  Score=161.07  Aligned_cols=132  Identities=26%  Similarity=0.464  Sum_probs=117.2

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ...+...++|.+.+.||.|+||.||++.+..+++.+|+|++.......  ....+.+|+.+++.                
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~----------------   71 (294)
T 2rku_A            8 LVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS----------------   71 (294)
T ss_dssp             EEETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT----------------
T ss_pred             eeCCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHh----------------
Confidence            344566779999999999999999999999999999999987653222  23456778888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++|+||+++++++.+.+..+++||++++++|.+++.....+++..+..++.|++.||.|||++||+||||
T Consensus        72 --------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  141 (294)
T 2rku_A           72 --------LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL  141 (294)
T ss_dssp             --------CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --------CCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                    8999999999999999999999999999999999988788999999999999999999999999999997

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=8.5e-25  Score=164.53  Aligned_cols=132  Identities=26%  Similarity=0.464  Sum_probs=117.0

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      .......++|.+.+.||.|+||.||++.+..+++.+++|++.......  ....+.+|+.+++.                
T Consensus        34 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~----------------   97 (335)
T 2owb_A           34 LVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS----------------   97 (335)
T ss_dssp             EEETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT----------------
T ss_pred             ecCcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHh----------------
Confidence            344556678999999999999999999999999999999987653222  23556778888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++|+||+++++++.+.+.+|++|||+++++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        98 --------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  167 (335)
T 2owb_A           98 --------LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL  167 (335)
T ss_dssp             --------CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             --------CCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCC
Confidence                    8999999999999999999999999999999999988788999999999999999999999999999997

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.93  E-value=1e-25  Score=167.84  Aligned_cols=131  Identities=28%  Similarity=0.400  Sum_probs=110.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .+..+.++|.+.+.||.|+||.||+|.+..+++.||||++........  ...+.+|+.++..                 
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-----------------   68 (311)
T 3ork_A            6 TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-----------------   68 (311)
T ss_dssp             CCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCC-----------------
T ss_pred             CcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHc-----------------
Confidence            345678899999999999999999999999999999999865432211  1344556555555                 


Q ss_pred             cccccccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                             ++||||+++++++....    ..|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+|||
T Consensus        69 -------l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  141 (311)
T 3ork_A           69 -------LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRD  141 (311)
T ss_dssp             -------CCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             -------CCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence                   89999999999987543    3599999999999999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       142 l  142 (311)
T 3ork_A          142 V  142 (311)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=6.4e-25  Score=168.37  Aligned_cols=132  Identities=33%  Similarity=0.554  Sum_probs=116.1

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ......+.++|.+.+.||.|+||.||+|.+..+++.+|+|++..... .....+.+|+.++..                 
T Consensus        43 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~-----------------  104 (387)
T 1kob_A           43 EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQ-----------------  104 (387)
T ss_dssp             CCBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTT-----------------
T ss_pred             cccCCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHh-----------------
Confidence            34455667899999999999999999999999999999999865432 123467788888888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+...++++|||+.+++|.+++.... .+++..+..++.||+.||.|||++||+||||
T Consensus       105 -------l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDl  175 (387)
T 1kob_A          105 -------LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDI  175 (387)
T ss_dssp             -------CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -------CCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence                   899999999999999999999999999999999987553 6999999999999999999999999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=5.9e-25  Score=161.32  Aligned_cols=129  Identities=22%  Similarity=0.348  Sum_probs=112.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||+|+||.||+|.+..+++.+|+|.+....... ....+.+|+..+..                    
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~--------------------   66 (289)
T 1x8b_A            7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--------------------   66 (289)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHH--------------------
T ss_pred             ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHH--------------------
Confidence            345678999999999999999999999999999999987543222 23456677777776                    


Q ss_pred             ccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          + +||||+++++++.+.+..+++||++++++|.+++...    ..+++..++.++.||+.||.|||++||+||||
T Consensus        67 ----l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Di  141 (289)
T 1x8b_A           67 ----LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDI  141 (289)
T ss_dssp             ----SCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----hCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCC
Confidence                5 8999999999999999999999999999999999764    56899999999999999999999999999997

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.93  E-value=6.7e-25  Score=161.98  Aligned_cols=124  Identities=25%  Similarity=0.348  Sum_probs=108.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+........ ...+.+|+.+++.                        
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~------------------------   57 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE------------------------   57 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT------------------------
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhc------------------------
Confidence            579999999999999999999999999999999975543222 2556788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++.++++||++++ ++.+.+. ..+.+++..++.++.||+.||+|||++||+||||
T Consensus        58 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~di  127 (292)
T 3o0g_A           58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL  127 (292)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             CCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            8999999999999999999999999975 6666554 4567999999999999999999999999999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.93  E-value=4.5e-25  Score=165.10  Aligned_cols=127  Identities=21%  Similarity=0.333  Sum_probs=108.7

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.++|.+.+.||.|+||.||+|.+..+++.||||++...........+.+|+.++..                       
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-----------------------   60 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK-----------------------   60 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTS-----------------------
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHh-----------------------
Confidence            456899999999999999999999999999999999755433344678889999988                       


Q ss_pred             cCCCCCceeeEEEEecCC---------------------------------------------------------eEEEE
Q psy13106        107 RLTHPNIVQLIETFEDKH---------------------------------------------------------KVYLV  129 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~---------------------------------------------------------~~~lv  129 (177)
                       ++||||+++++++.+..                                                         +++++
T Consensus        61 -l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  139 (332)
T 3qd2_B           61 -LEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQ  139 (332)
T ss_dssp             -CCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEE
T ss_pred             -CCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEE
Confidence             89999999999885433                                                         38999


Q ss_pred             EeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        130 MELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       130 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||||++++|.+++.....   .+...+..++.||+.||+|||++||+||||
T Consensus       140 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  190 (332)
T 3qd2_B          140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDL  190 (332)
T ss_dssp             EECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             EEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            999999999999986543   456678999999999999999999999997

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=8.6e-25  Score=160.50  Aligned_cols=127  Identities=39%  Similarity=0.717  Sum_probs=115.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +.++|.+.+.||.|+||.||+|.+..+++.+|+|++.......     ....+.+|+.++..                  
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~------------------   64 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE------------------   64 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHH------------------
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHh------------------
Confidence            4568999999999999999999999999999999997654322     13567889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+....+++||++++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        65 ------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  134 (283)
T 3bhy_A           65 ------IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDL  134 (283)
T ss_dssp             ------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ------CCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence                  8999999999999999999999999999999999988888999999999999999999999999999997

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.93  E-value=7.5e-25  Score=162.99  Aligned_cols=125  Identities=22%  Similarity=0.432  Sum_probs=112.3

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ......+.+|+.++..                        
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~------------------------   63 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRC------------------------   63 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTT------------------------
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHh------------------------
Confidence            568999999999999999999999999999999884322 2233567889988888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++||+||||
T Consensus        64 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dl  134 (310)
T 3s95_A           64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL  134 (310)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence            8999999999999999999999999999999999987 456999999999999999999999999999997

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.93  E-value=7.9e-25  Score=162.44  Aligned_cols=129  Identities=50%  Similarity=0.816  Sum_probs=113.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.++|.+.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+|+.++..                    
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~--------------------   62 (304)
T 2jam_A            4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKK--------------------   62 (304)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHH--------------------
T ss_pred             ccchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHh--------------------
Confidence            45667899999999999999999999999999999999875432 233567889999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+...++++||++++++|.+++...+.+++..+..++.|++.||.|||++||+||||
T Consensus        63 ----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~di  132 (304)
T 2jam_A           63 ----IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL  132 (304)
T ss_dssp             ----CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSC
T ss_pred             ----CCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                8999999999999999999999999999999999988888999999999999999999999999999997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.93  E-value=1e-24  Score=162.46  Aligned_cols=129  Identities=29%  Similarity=0.525  Sum_probs=114.1

Q ss_pred             cccccceEEE-eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILK-ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+. +.||.|+||.||+|.+..+++.||||++.... ......+.+|+.++...                   
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~-------------------   67 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQC-------------------   67 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHT-------------------
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHh-------------------
Confidence            4566789985 78999999999999999999999999986543 22345678888888762                   


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          .+||||+++++++.+.+.+|++||++++++|.+++.....+++..+..++.||+.||+|||++||+||||
T Consensus        68 ----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dl  137 (316)
T 2ac3_A           68 ----QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL  137 (316)
T ss_dssp             ----CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ----cCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCC
Confidence                3799999999999999999999999999999999988888999999999999999999999999999997

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.93  E-value=4.9e-25  Score=161.17  Aligned_cols=127  Identities=32%  Similarity=0.479  Sum_probs=115.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.++|.+.+.||.|+||.||+|.+..+++.+|+|++...........+.+|+.+++.                       
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-----------------------   61 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----------------------   61 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHT-----------------------
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHh-----------------------
Confidence            456899999999999999999999999999999999755433344667888888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+.+..+++||++++++|.+++.....+++..+..++.|++.||.|||++||+|+||
T Consensus        62 -l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  131 (276)
T 2yex_A           62 -LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI  131 (276)
T ss_dssp             -CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -cCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence             8999999999999999999999999999999999987778999999999999999999999999999997

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=7.3e-25  Score=167.11  Aligned_cols=129  Identities=22%  Similarity=0.383  Sum_probs=111.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ....++|.+.+.||.|+||.||+|.+..       ++..||||++...........+.+|+.++..              
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------  142 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--------------  142 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHH--------------
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHH--------------
Confidence            4456789999999999999999999753       3457999998654333334567889999988              


Q ss_pred             CCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHH
Q psy13106         98 NNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQV  160 (177)
Q Consensus        98 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi  160 (177)
                                + +||||+++++++.+.+.+|+||||+++++|.+++....                .++...+..++.||
T Consensus       143 ----------l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  212 (370)
T 2psq_A          143 ----------IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL  212 (370)
T ss_dssp             ----------SCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHH
T ss_pred             ----------hcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHH
Confidence                      6 79999999999999999999999999999999997643                37889999999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+|||++||+||||
T Consensus       213 ~~aL~~LH~~~ivHrDl  229 (370)
T 2psq_A          213 ARGMEYLASQKCIHRDL  229 (370)
T ss_dssp             HHHHHHHHHTTEECSCC
T ss_pred             HHHHHHHHhCCeecccc
Confidence            99999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=6.3e-25  Score=161.74  Aligned_cols=133  Identities=35%  Similarity=0.637  Sum_probs=118.8

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....+.+.++|.+.+.||.|+||.||+|.+..+++.|++|++....... ....+.+|+.+++.                
T Consensus        14 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~----------------   77 (287)
T 2wei_A           14 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK----------------   77 (287)
T ss_dssp             HHHTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHT----------------
T ss_pred             hhHHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHh----------------
Confidence            3445567789999999999999999999999999999999997654332 23567889998888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.+.+.++++||++++++|.+.+.....+++..+..++.||+.||.|||++||+|+||
T Consensus        78 --------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl  147 (287)
T 2wei_A           78 --------LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL  147 (287)
T ss_dssp             --------CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --------ccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                    8999999999999999999999999999999999988788999999999999999999999999999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=7.1e-25  Score=164.44  Aligned_cols=123  Identities=40%  Similarity=0.661  Sum_probs=110.7

Q ss_pred             cccceEEE---eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         27 IEEKYILK---ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        27 ~~~~y~~~---~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +.++|.+.   +.||.|+||.||+|.+..+++.||||++...    ......+|+.++..                    
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~--------------------   61 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKL--------------------   61 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHH--------------------
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHH--------------------
Confidence            44578775   7899999999999999999999999998643    23456778888887                    


Q ss_pred             ccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          +. ||||+++++++.+....|++||++++++|.+++.....+++..++.++.||+.||.|||++||+||||
T Consensus        62 ----l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  132 (325)
T 3kn6_A           62 ----CEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL  132 (325)
T ss_dssp             ----TTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----hcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence                54 99999999999999999999999999999999998888999999999999999999999999999997

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.93  E-value=1.2e-24  Score=159.14  Aligned_cols=131  Identities=33%  Similarity=0.609  Sum_probs=116.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .+....++|.+.+.||.|+||.||+|.+..+++.+++|++.......  ....+.+|+.+++.                 
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------   67 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL-----------------   67 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-----------------
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhc-----------------
Confidence            45566789999999999999999999999999999999997543221  23467788888888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+....+++||++++++|.+++.....+++..+..++.||+.||.|||++||+|+||
T Consensus        68 -------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  137 (276)
T 2h6d_A           68 -------FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL  137 (276)
T ss_dssp             -------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCC
T ss_pred             -------CCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence                   8999999999999999999999999999999999988888999999999999999999999999999997

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.93  E-value=2.1e-24  Score=159.84  Aligned_cols=133  Identities=23%  Similarity=0.314  Sum_probs=111.2

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEE----EecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      ..+.....++|++.+.||.|+||.||+|.    +..+++.||+|.+...........+.+|+.++..             
T Consensus        13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------   79 (302)
T 4e5w_A           13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-------------   79 (302)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHT-------------
T ss_pred             cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHh-------------
Confidence            34444556679999999999999999999    4667899999999755433344677889999988             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                 ++||||+++++++...  +.++++||++++++|.+++... ..+++..+..++.|++.||+|||++||+
T Consensus        80 -----------l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  148 (302)
T 4e5w_A           80 -----------LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV  148 (302)
T ss_dssp             -----------CCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             -----------CCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcc
Confidence                       8999999999999866  6799999999999999999544 5699999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       149 H~di  152 (302)
T 4e5w_A          149 HRDL  152 (302)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9997

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=1.2e-24  Score=159.50  Aligned_cols=129  Identities=26%  Similarity=0.495  Sum_probs=115.3

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||+|.+..++..+|+|++.......  ....+.+|+.++..                   
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-------------------   65 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH-------------------   65 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTT-------------------
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHc-------------------
Confidence            345678999999999999999999999999999999986543222  23557788888887                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+....+++|||+++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        66 -----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dl  135 (279)
T 3fdn_A           66 -----LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI  135 (279)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred             -----CCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence                 8999999999999999999999999999999999988888999999999999999999999999999997

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=4.8e-25  Score=168.48  Aligned_cols=129  Identities=26%  Similarity=0.450  Sum_probs=113.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||||.+...........+.+|+.+++.                     
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------------------  168 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ---------------------  168 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTT---------------------
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHh---------------------
Confidence            34456899999999999999999999989999999998644322233567788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.....+|+||||+++++|.+++...+ .++...+..++.||+.||+|||++||+||||
T Consensus       169 ---l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDl  239 (377)
T 3cbl_A          169 ---YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL  239 (377)
T ss_dssp             ---CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---CCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCccc
Confidence               899999999999998899999999999999999997654 5999999999999999999999999999997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.93  E-value=1.3e-24  Score=161.58  Aligned_cols=126  Identities=25%  Similarity=0.371  Sum_probs=112.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.+|+|.+........ ...+.+|+.++..                       
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-----------------------   58 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ-----------------------   58 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHH-----------------------
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHh-----------------------
Confidence            4689999999999999999999999999999999865432221 2456788888888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+.+..+++||++++++|.+++.....+++..+..++.|++.||.|||++||+||||
T Consensus        59 -l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dl  128 (311)
T 4agu_A           59 -LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV  128 (311)
T ss_dssp             -CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -CCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence             8999999999999999999999999999999998887778999999999999999999999999999997

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.93  E-value=1.8e-24  Score=159.24  Aligned_cols=127  Identities=21%  Similarity=0.270  Sum_probs=112.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCC-------cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENG-------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ...++|.+.+.||.|+||.||+|.+..++       ..+++|.+.... ......+.+|+.++..               
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~---------------   68 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSK---------------   68 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHT---------------
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHh---------------
Confidence            45678999999999999999999998876       479999986433 2234567888888888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS-YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++||||+++++++.+.+..+++|||+++++|.+++..... +++..+..++.||+.||.|||++||+||||
T Consensus        69 ---------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl  139 (289)
T 4fvq_A           69 ---------LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNV  139 (289)
T ss_dssp             ---------SCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ---------CCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCc
Confidence                     8999999999999999999999999999999999987654 999999999999999999999999999997

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.93  E-value=1.5e-24  Score=159.46  Aligned_cols=131  Identities=27%  Similarity=0.570  Sum_probs=115.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ......++|.+.+.||.|+||.||+|.+..+++.+|+|++.......  ....+.+|+.++..                 
T Consensus         8 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-----------------   70 (284)
T 2vgo_A            8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH-----------------   70 (284)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-----------------
T ss_pred             ccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhc-----------------
Confidence            34455678999999999999999999999999999999997543222  23567788888888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+.+.++++||++++++|.+++...+.+++..+..++.||+.||.|||++||+||||
T Consensus        71 -------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  140 (284)
T 2vgo_A           71 -------LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDI  140 (284)
T ss_dssp             -------CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             -------CCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence                   8999999999999999999999999999999999988888999999999999999999999999999997

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.93  E-value=4.3e-25  Score=172.08  Aligned_cols=129  Identities=26%  Similarity=0.475  Sum_probs=107.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||||++.......  ....+.+|+.++..                   
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-------------------  204 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-------------------  204 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCC-------------------
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHh-------------------
Confidence            345678999999999999999999999999999999997543211  12334445544444                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                           ++||||+++++++.+.+.+|+||||+++++|.+++.....+++..++.++.||+.||+|||+ +||+||||
T Consensus       205 -----l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDl  275 (446)
T 4ejn_A          205 -----SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL  275 (446)
T ss_dssp             -----CSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             -----CCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCC
Confidence                 89999999999999999999999999999999999888889999999999999999999998 99999997

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=7.6e-25  Score=166.84  Aligned_cols=129  Identities=22%  Similarity=0.306  Sum_probs=110.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEE-----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAES-----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....++|.+.+.||.|+||.||+|.+     ..+++.||||.+...........+.+|+.++..                
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~----------------  130 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK----------------  130 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHH----------------
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHh----------------
Confidence            45567899999999999999999994     456789999998644333334567788888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-------SYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                              ++||||+++++++.+....++|||||++++|.+++....       .++...+..++.||+.||.|||++||
T Consensus       131 --------l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  202 (367)
T 3l9p_A          131 --------FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF  202 (367)
T ss_dssp             --------CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             --------CCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence                    899999999999999999999999999999999997643       48899999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       203 vHrDl  207 (367)
T 3l9p_A          203 IHRDI  207 (367)
T ss_dssp             CCSCC
T ss_pred             eCCCC
Confidence            99997

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.92  E-value=6.2e-25  Score=171.64  Aligned_cols=128  Identities=23%  Similarity=0.354  Sum_probs=102.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.++..                    
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~--------------------  108 (458)
T 3rp9_A           49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNR--------------------  108 (458)
T ss_dssp             CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHH--------------------
T ss_pred             CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHh--------------------
Confidence            345678999999999999999999999999999999986432211 22567789999998                    


Q ss_pred             ccccCCCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++++..     ...+|+|||++ +++|.+++.....+++..++.++.||+.||.|||++|||||||
T Consensus       109 ----l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDl  182 (458)
T 3rp9_A          109 ----LNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDL  182 (458)
T ss_dssp             ----CCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ----CCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCC
Confidence                899999999999843     35799999998 5799999988888999999999999999999999999999997

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=7.2e-25  Score=169.67  Aligned_cols=129  Identities=33%  Similarity=0.616  Sum_probs=112.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-------cchhHHHHHHHHHhhcccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-------KEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      ...+.++|.+.+.||.|+||.||+|.+..+++.||||++.......       ....+.+|+.++..             
T Consensus       130 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-------------  196 (419)
T 3i6u_A          130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK-------------  196 (419)
T ss_dssp             CHHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHH-------------
T ss_pred             chhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHh-------------
Confidence            3455678999999999999999999999999999999997653221       12356789999998             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                 ++||||+++++++. ....|++|||+++++|.+++.....+++..++.++.|++.||+|||++||+|||
T Consensus       197 -----------l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  264 (419)
T 3i6u_A          197 -----------LNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD  264 (419)
T ss_dssp             -----------CCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             -----------CCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence                       89999999999985 456899999999999999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       265 l  265 (419)
T 3i6u_A          265 L  265 (419)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.92  E-value=1.1e-24  Score=165.20  Aligned_cols=132  Identities=20%  Similarity=0.300  Sum_probs=116.9

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+....++|.+.+.||.|+||.||+|.+..+++.+|+|++...........+.+|+.++..                  
T Consensus        26 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~------------------   87 (360)
T 3eqc_A           26 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE------------------   87 (360)
T ss_dssp             TCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGG------------------
T ss_pred             cccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHH------------------
Confidence            34566778999999999999999999999999999999998754322333556777777777                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                            ++||||+++++++.+++.++++|||+++++|.+++...+.+++..+..++.|++.||.|||+. ||+||||
T Consensus        88 ------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dl  158 (360)
T 3eqc_A           88 ------CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV  158 (360)
T ss_dssp             ------CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             ------CCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCc
Confidence                  899999999999999999999999999999999998888899999999999999999999996 9999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.92  E-value=7.6e-25  Score=164.83  Aligned_cols=131  Identities=21%  Similarity=0.299  Sum_probs=114.1

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ......++|.+.+.||.|+||.||+|.+..     +++.||+|.+...........+.+|+.++..              
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------  106 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE--------------  106 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHT--------------
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHh--------------
Confidence            345667799999999999999999999873     4589999998654333334567889999888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc------------------------CCCCHHHH
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK------------------------GSYTEKDA  153 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~  153 (177)
                                ++||||+++++++.+.+.++++|||+++++|.+++...                        ..+++..+
T Consensus       107 ----------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  176 (343)
T 1luf_A          107 ----------FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ  176 (343)
T ss_dssp             ----------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHH
T ss_pred             ----------CCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHH
Confidence                      89999999999999999999999999999999999763                        45899999


Q ss_pred             HHHHHHHHHHHHHHHhCCccccCC
Q psy13106        154 SMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       154 ~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.++.||+.||.|||++||+||||
T Consensus       177 ~~i~~qi~~~l~~LH~~~ivH~Dl  200 (343)
T 1luf_A          177 LCIARQVAAGMAYLSERKFVHRDL  200 (343)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCC
Confidence            999999999999999999999997

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=1.1e-24  Score=161.93  Aligned_cols=133  Identities=23%  Similarity=0.326  Sum_probs=113.6

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ........++|.+.+.||.|+||.||+|.+.     .+++.+|+|.+...........+.+|+.++..            
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~------------   82 (314)
T 2ivs_A           15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ------------   82 (314)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTT------------
T ss_pred             CcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhh------------
Confidence            3445566779999999999999999999984     34588999998654332333567788888888            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC------------------------CCHH
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS------------------------YTEK  151 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------------------------~~~~  151 (177)
                                  ++||||+++++++.+.+..+++|||+++++|.+++.....                        +++.
T Consensus        83 ------------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (314)
T 2ivs_A           83 ------------VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG  150 (314)
T ss_dssp             ------------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHH
T ss_pred             ------------CCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHH
Confidence                        8999999999999999999999999999999999976432                        8899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        152 DASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       152 ~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .+..++.||+.||.|||++||+||||
T Consensus       151 ~~~~i~~qi~~~l~~lH~~~ivH~di  176 (314)
T 2ivs_A          151 DLISFAWQISQGMQYLAEMKLVHRDL  176 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCccccc
Confidence            99999999999999999999999997

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=2.2e-24  Score=160.54  Aligned_cols=133  Identities=23%  Similarity=0.341  Sum_probs=112.9

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ........++|.+.+.||.|+||.||+|.+..+++.||+|++........  ...+.+|+.++..               
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~---------------   90 (309)
T 2h34_A           26 ESREGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR---------------   90 (309)
T ss_dssp             --------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTT---------------
T ss_pred             ccCCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhh---------------
Confidence            34455667789999999999999999999999999999999865432221  2556778888887               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++||||+++++++...+.+|++||++++++|.+++.....+++..+..++.|++.||.|||++||+||||
T Consensus        91 ---------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  160 (309)
T 2h34_A           91 ---------LQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDV  160 (309)
T ss_dssp             ---------CCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---------cCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCC
Confidence                     8999999999999999999999999999999999988888999999999999999999999999999997

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=2.2e-24  Score=172.11  Aligned_cols=129  Identities=27%  Similarity=0.456  Sum_probs=114.8

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||+|++.+.....  ....+.+|+.++..                   
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~-------------------  240 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-------------------  240 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-------------------
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHH-------------------
Confidence            355678999999999999999999999999999999997654322  23456789999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+...+|+||||+++|+|.+++...+.  +++..++.++.||+.||.|||++||+||||
T Consensus       241 -----l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDL  312 (576)
T 2acx_A          241 -----VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL  312 (576)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----cCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCC
Confidence                 8999999999999999999999999999999999876543  999999999999999999999999999997

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.92  E-value=1.2e-24  Score=161.13  Aligned_cols=127  Identities=28%  Similarity=0.582  Sum_probs=106.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-------------------------cchhHHHHHHH
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-------------------------KEDSLENEIKV   80 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-------------------------~~~~~~~e~~~   80 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||||++.......                         ....+.+|+.+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            44578999999999999999999999999999999997543211                         12456788888


Q ss_pred             HHhhcccccccccccccCCCcccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHH
Q psy13106         81 LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIR  158 (177)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  158 (177)
                      ++.                        ++||||+++++++.+  ...+|++||++++++|.+++. ...+++..+..++.
T Consensus        90 l~~------------------------l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~  144 (298)
T 2zv2_A           90 LKK------------------------LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQ  144 (298)
T ss_dssp             HHT------------------------CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHH
T ss_pred             HHh------------------------CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHH
Confidence            888                        899999999999986  568999999999999988653 45699999999999


Q ss_pred             HHHHHHHHHHhCCccccCC
Q psy13106        159 QVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       159 qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+.||.|||++||+||||
T Consensus       145 qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A          145 DLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             HHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHHHHHHHCCeeccCC
Confidence            9999999999999999997

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.92  E-value=2e-24  Score=161.04  Aligned_cols=133  Identities=26%  Similarity=0.377  Sum_probs=109.9

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhccccccccccccc
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ......+.+.++|++.+.||.|+||.||+|.+. +++.+|+|.+....... ....+.+|+.+++.              
T Consensus        11 ~~~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--------------   75 (311)
T 3niz_A           11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKE--------------   75 (311)
T ss_dssp             ----CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHH--------------
T ss_pred             ccceeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHH--------------
Confidence            334466678899999999999999999999985 48899999986543222 22567789999988              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                ++||||+++++++.+.+.++++|||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+|||
T Consensus        76 ----------l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~D  144 (311)
T 3niz_A           76 ----------LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRD  144 (311)
T ss_dssp             ----------CCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ----------cCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence                      8999999999999999999999999975 888877654 3499999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       145 i  145 (311)
T 3niz_A          145 L  145 (311)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=9.7e-25  Score=165.26  Aligned_cols=132  Identities=21%  Similarity=0.304  Sum_probs=111.3

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEE-----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAES-----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .......++|.+.+.||.|+||.||+|.+     ..+++.||||.+...........+.+|+.++..             
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------   81 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-------------   81 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH-------------
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHh-------------
Confidence            34455677999999999999999999994     445689999999654433334567889999888             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCC-eEEEEEeccCCcchhHHHHhcCC---------------------------
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKH-KVYLVMELVTGGELFDRIVEKGS---------------------------  147 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~---------------------------  147 (177)
                                 + +||||+++++++.+.+ .++++||||++++|.+++.....                           
T Consensus        82 -----------l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (359)
T 3vhe_A           82 -----------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK  150 (359)
T ss_dssp             -----------HCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------
T ss_pred             -----------hcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhh
Confidence                       5 7999999999988654 59999999999999999976432                           


Q ss_pred             ---------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        148 ---------------------------------------YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       148 ---------------------------------------~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                                             +++..+..++.||+.||.|||++||+||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Di  219 (359)
T 3vhe_A          151 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL  219 (359)
T ss_dssp             ---------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                                                   889999999999999999999999999997

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.92  E-value=4e-24  Score=163.58  Aligned_cols=134  Identities=22%  Similarity=0.388  Sum_probs=114.6

Q ss_pred             CcccCcccccceEEEeeecccceeEEEEEEEecCC-------cEEEEEEEecccccccchhHHHHHHHHHhhcccccccc
Q psy13106         20 NEIKGPSIEEKYILKELLGTGAFSEVRLAESRENG-------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        20 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      .........++|.+.+.||.|+||.||+|.+..++       ..+|+|++...........+.+|+.++..         
T Consensus        60 ~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------  130 (382)
T 3tt0_A           60 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM---------  130 (382)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH---------
T ss_pred             cCcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHH---------
Confidence            33445666789999999999999999999986433       57999998655433333567889999888         


Q ss_pred             cccccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHH
Q psy13106         93 DETNDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASM  155 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~  155 (177)
                                     + +||||+++++++.+.+.+++|||++++++|.+++....                .+++..+..
T Consensus       131 ---------------l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  195 (382)
T 3tt0_A          131 ---------------IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS  195 (382)
T ss_dssp             ---------------HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHH
T ss_pred             ---------------hcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHH
Confidence                           5 89999999999999999999999999999999997653                489999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCC
Q psy13106        156 LIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       156 ~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.||+.||.|||++||+||||
T Consensus       196 i~~qi~~aL~~LH~~~ivH~Dl  217 (382)
T 3tt0_A          196 CAYQVARGMEYLASKKCIHRDL  217 (382)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHHHHHHhCCEecCCC
Confidence            9999999999999999999997

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.92  E-value=1.6e-24  Score=162.07  Aligned_cols=128  Identities=34%  Similarity=0.640  Sum_probs=110.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-------ccchhHHHHHHHHHhhccccccccccccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-------GKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||++......       .....+.+|+.++..              
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--------------   71 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK--------------   71 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHH--------------
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHh--------------
Confidence            45667899999999999999999999999999999998654321       112356789999988              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                                ++||||+++++++.... .|++||++++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        72 ----------l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  140 (322)
T 2ycf_A           72 ----------LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDL  140 (322)
T ss_dssp             ----------CCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----------CCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                      89999999999987654 8999999999999999988888999999999999999999999999999997

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.92  E-value=4.3e-24  Score=156.49  Aligned_cols=127  Identities=33%  Similarity=0.560  Sum_probs=112.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++|.+.+.||.|+||.||+|.+..+++.+|+|.+.......  ....+.+|+.++..                     
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~---------------------   67 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ---------------------   67 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT---------------------
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHh---------------------
Confidence            3457999999999999999999999999999999997543222  22567788888887                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+.+..+++||++++++|.+++... ..+++..+..++.|++.||.|||++||+||||
T Consensus        68 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  138 (278)
T 3cok_A           68 ---LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDL  138 (278)
T ss_dssp             ---BCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSC
T ss_pred             ---CCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence               89999999999999999999999999999999998865 56999999999999999999999999999997

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.92  E-value=3.4e-24  Score=158.37  Aligned_cols=130  Identities=33%  Similarity=0.517  Sum_probs=113.1

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--------ccchhHHHHHHHHHhhccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--------GKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--------~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ...+.++|.+.+.||.|+||.||+|.+..+++.||+|++......        .....+.+|+.++..            
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~------------   79 (298)
T 1phk_A           12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK------------   79 (298)
T ss_dssp             ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHH------------
T ss_pred             CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHH------------
Confidence            445678999999999999999999999999999999999754311        112445678888877            


Q ss_pred             ccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106         96 NDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus        96 ~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                                  + +||||+++++++..++..+++||++++++|.+++.....+++..+..++.||+.||.|||++||+|
T Consensus        80 ------------l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  147 (298)
T 1phk_A           80 ------------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH  147 (298)
T ss_dssp             ------------HTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             ------------hcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence                        5 599999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      +||
T Consensus       148 ~dl  150 (298)
T 1phk_A          148 RDL  150 (298)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            997

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=1.6e-24  Score=161.87  Aligned_cols=125  Identities=22%  Similarity=0.376  Sum_probs=97.7

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||.|+||.||+|.+..+++.||+|.+...........+.+|+.+++.                        
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------------   59 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE------------------------   59 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTT------------------------
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHh------------------------
Confidence            45899999999999999999999999999999999765433444677889999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK------GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+.+.++++|||++ ++|.+++...      ..+++..++.++.||+.||.|||++||+||||
T Consensus        60 l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dl  134 (317)
T 2pmi_A           60 LKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDL  134 (317)
T ss_dssp             CCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             cCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence            899999999999999999999999997 5999988654      24899999999999999999999999999997

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.92  E-value=5e-24  Score=157.99  Aligned_cols=128  Identities=24%  Similarity=0.487  Sum_probs=114.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....+.|.+.+.||.|+||.||+|.+..+++.+|+|++...........+.+|+.++..                     
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~---------------------   76 (303)
T 3a7i_A           18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ---------------------   76 (303)
T ss_dssp             ECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHH---------------------
T ss_pred             CChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHh---------------------
Confidence            34566899999999999999999999999999999999765544444677889998888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+...++++||++++++|.+++.. ..+++..+..++.|++.||.|||++||+|+||
T Consensus        77 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  145 (303)
T 3a7i_A           77 ---CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDI  145 (303)
T ss_dssp             ---CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---CCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence               8999999999999999999999999999999998865 46999999999999999999999999999997

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.92  E-value=2.5e-24  Score=161.58  Aligned_cols=124  Identities=20%  Similarity=0.292  Sum_probs=111.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||++....   ....+..|+.+++.                      
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~----------------------   60 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQ----------------------   60 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHH----------------------
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHH----------------------
Confidence            45678999999999999999999999999999999986442   33567889999988                      


Q ss_pred             ccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        + +|+||+++++++......+++||++ +++|.+++... ..+++..+..++.||+.||+|||++||+||||
T Consensus        61 --l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDl  131 (330)
T 2izr_A           61 --LGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDV  131 (330)
T ss_dssp             --HCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --hhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence              6 8999999999999999999999999 89999998763 56999999999999999999999999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.92  E-value=3.5e-24  Score=166.39  Aligned_cols=131  Identities=22%  Similarity=0.382  Sum_probs=114.1

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...-.+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                 
T Consensus        19 ~~~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~-----------------   81 (432)
T 3n9x_A           19 IKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR-----------------   81 (432)
T ss_dssp             GGGCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHH-----------------
T ss_pred             CCcceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHH-----------------
Confidence            344556789999999999999999999999999999999986432211 22567789999998                 


Q ss_pred             cccccccCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                             ++|+||+++++++...     ..+|+|||++. ++|.+++.....+++..++.++.||+.||.|||++||+||
T Consensus        82 -------l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHr  153 (432)
T 3n9x_A           82 -------LKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR  153 (432)
T ss_dssp             -------CCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             -------cCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence                   8999999999999765     57999999995 6999999888789999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       154 Dl  155 (432)
T 3n9x_A          154 DL  155 (432)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.92  E-value=1.3e-24  Score=163.66  Aligned_cols=129  Identities=31%  Similarity=0.428  Sum_probs=114.9

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-------cchhHHHHHHHHHhhccccccccccccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-------KEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||.+.......       ....+.+|+.++..              
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--------------   85 (335)
T 3dls_A           20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR--------------   85 (335)
T ss_dssp             THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTT--------------
T ss_pred             cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHh--------------
Confidence            346679999999999999999999999999999999997653211       22456788998888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCc-chhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG-ELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                                ++||||+++++++.+.+.++++||++.++ +|.+++.....+++..+..++.||+.||.|||++||+|||
T Consensus        86 ----------l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  155 (335)
T 3dls_A           86 ----------VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRD  155 (335)
T ss_dssp             ----------CCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ----------CCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEec
Confidence                      89999999999999999999999998766 9999998888899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       156 l  156 (335)
T 3dls_A          156 I  156 (335)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.92  E-value=1.8e-24  Score=159.84  Aligned_cols=130  Identities=22%  Similarity=0.369  Sum_probs=110.5

Q ss_pred             cCcccccceEEEeeecccceeEEEEEE----EecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +.....++|++.+.||.|+||.||+|+    ...+++.||||.+.... ......+.+|+.++..               
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~---------------   67 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKS---------------   67 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHT---------------
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHh---------------
Confidence            345667899999999999999999998    45678999999986432 1223567789999988               


Q ss_pred             CCcccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                               ++||||+++++++..  ...++++|||+++++|.+++.... .+++..+..++.|++.||.|||++||+||
T Consensus        68 ---------l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~  138 (295)
T 3ugc_A           68 ---------LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR  138 (295)
T ss_dssp             ---------CCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             ---------CCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence                     899999999999854  456899999999999999997654 49999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       139 Di  140 (295)
T 3ugc_A          139 DL  140 (295)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.92  E-value=4.3e-24  Score=157.12  Aligned_cols=130  Identities=22%  Similarity=0.343  Sum_probs=115.7

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .......++|.+.+.||.|+||.||+|.+..++..+|+|.+....  .....+.+|+.+++.                  
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~------------------   65 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKE------------------   65 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHH------------------
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHh------------------
Confidence            455667789999999999999999999999999999999986432  233567889999998                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.+.+.++++||++++++|.+++...  ..+++..+..++.|++.||.|||++||+||||
T Consensus        66 ------l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~di  137 (288)
T 3kfa_A           66 ------IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL  137 (288)
T ss_dssp             ------CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCC
T ss_pred             ------CCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence                  89999999999999999999999999999999999764  34899999999999999999999999999997

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=5.7e-24  Score=156.19  Aligned_cols=129  Identities=22%  Similarity=0.395  Sum_probs=110.2

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .......++|.+.+.||.|+||.||++.+. ++..+|+|.+.....  ....+.+|+.++..                  
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~------------------   75 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM--SEDEFIEEAKVMMN------------------   75 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB--CHHHHHHHHHHHHT------------------
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC--CHHHHHHHHHHHhc------------------
Confidence            344566779999999999999999999876 567899999865432  33567889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++|+||+++++++.+.+.++++||++++++|.+++.. ...+++..+..++.|++.||.|||++||+||||
T Consensus        76 ------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di  146 (283)
T 3gen_A           76 ------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL  146 (283)
T ss_dssp             ------CCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             ------CCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence                  8899999999999999999999999999999999976 456999999999999999999999999999997

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=3e-24  Score=159.61  Aligned_cols=133  Identities=23%  Similarity=0.300  Sum_probs=114.2

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEE-----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAES-----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ........++|.+.+.||.|+||.||+|.+     ..+++.+|+|.+...........+.+|+.++..            
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~------------   82 (313)
T 1t46_A           15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY------------   82 (313)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH------------
T ss_pred             ccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhh------------
Confidence            344556667999999999999999999986     346789999998754432334667889988888            


Q ss_pred             ccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC------------------CCCHHHHHHH
Q psy13106         96 NDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG------------------SYTEKDASML  156 (177)
Q Consensus        96 ~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~  156 (177)
                                  + +||||+++++++.+.+..+++||++++++|.+++....                  .+++..+..+
T Consensus        83 ------------l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (313)
T 1t46_A           83 ------------LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF  150 (313)
T ss_dssp             ------------HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHH
T ss_pred             ------------cccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHH
Confidence                        6 89999999999999999999999999999999997653                  3899999999


Q ss_pred             HHHHHHHHHHHHhCCccccCC
Q psy13106        157 IRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       157 ~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+.||.|||++||+||||
T Consensus       151 ~~qi~~~l~~lH~~~i~H~dl  171 (313)
T 1t46_A          151 SYQVAKGMAFLASKNCIHRDL  171 (313)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHHHHHHCCeecCCC
Confidence            999999999999999999997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=3.2e-24  Score=161.67  Aligned_cols=132  Identities=25%  Similarity=0.366  Sum_probs=111.1

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .......++|.+.+.||.|+||.||+|.+.     .++..||+|.+...........+.+|+.++..             
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------  104 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ-------------  104 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHH-------------
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHh-------------
Confidence            344556679999999999999999999973     35668999999755433445678899999988             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----------------------CCCHHH
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----------------------SYTEKD  152 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~  152 (177)
                                 + +||||+++++++...+.++++|||+++++|.+++....                       .+++..
T Consensus       105 -----------l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  173 (344)
T 1rjb_A          105 -----------LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED  173 (344)
T ss_dssp             -----------HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHH
T ss_pred             -----------hcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHH
Confidence                       6 89999999999999999999999999999999997643                       278999


Q ss_pred             HHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        153 ASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       153 ~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +..++.||+.||.|||++||+||||
T Consensus       174 ~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          174 LLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999999999999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.92  E-value=4.1e-24  Score=159.29  Aligned_cols=131  Identities=23%  Similarity=0.398  Sum_probs=111.5

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....+...++|.+.+.||.|+||.||+|.+  +++.+|||++....... ....+.+|+.++..                
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~----------------   90 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKR----------------   90 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHH----------------
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHh----------------
Confidence            344455567899999999999999999976  47889999986543222 22457789999988                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHEAR--YLS  174 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~g--iiH  174 (177)
                              ++||||+++++++.+...++++|||+++++|.+++.....   +++..+..++.||+.||+|||++|  |+|
T Consensus        91 --------l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH  162 (309)
T 3p86_A           91 --------LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH  162 (309)
T ss_dssp             --------CCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred             --------CCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEC
Confidence                    8999999999999999999999999999999999976543   899999999999999999999999  999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       163 ~Di  165 (309)
T 3p86_A          163 RNL  165 (309)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            997

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=8.1e-24  Score=158.55  Aligned_cols=128  Identities=23%  Similarity=0.440  Sum_probs=110.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEE--EEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMF--AVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~--avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||.|+||.||+|.+..++..+  ++|.+...........+.+|+.++..                    
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~--------------------   81 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK--------------------   81 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTT--------------------
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHh--------------------
Confidence            34468999999999999999999999888765  89988654333344667889988888                    


Q ss_pred             ccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHHHHHHHH
Q psy13106        104 DKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus       104 ~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~  166 (177)
                          + +||||+++++++.+.+.+|++||++++++|.+++....                .+++..++.++.||+.||.|
T Consensus        82 ----l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  157 (327)
T 1fvr_A           82 ----LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY  157 (327)
T ss_dssp             ----CCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence                6 89999999999999999999999999999999997653                68999999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||++||+||||
T Consensus       158 LH~~~ivH~dl  168 (327)
T 1fvr_A          158 LSQKQFIHRDL  168 (327)
T ss_dssp             HHHTTEECSCC
T ss_pred             HHhCCccCCCC
Confidence            99999999997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.92  E-value=1.4e-23  Score=156.07  Aligned_cols=132  Identities=25%  Similarity=0.376  Sum_probs=112.4

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ..+....++|.+.+.||.|+||.||+|.+..+++.+|+|.+.......  ....+.+|+.++..                
T Consensus        25 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~----------------   88 (310)
T 2wqm_A           25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ----------------   88 (310)
T ss_dssp             GGTTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHT----------------
T ss_pred             CcccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHh----------------
Confidence            344556678999999999999999999999999999999986533221  22456788888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                              ++||||+++++++...+..+++||++++++|.+++..    ...+++..+..++.||+.||.|||++||+||
T Consensus        89 --------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~  160 (310)
T 2wqm_A           89 --------LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR  160 (310)
T ss_dssp             --------CCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             --------CCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence                    8999999999999999999999999999999998864    3458999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       161 dl  162 (310)
T 2wqm_A          161 DI  162 (310)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.92  E-value=5.6e-24  Score=159.73  Aligned_cols=129  Identities=23%  Similarity=0.330  Sum_probs=113.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      -...++|++.+.||.|+||.||+|.+..+++.||+|.+........ ...+.+|+.++..                    
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   80 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ--------------------   80 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHH--------------------
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhh--------------------
Confidence            3445689999999999999999999999999999999865432221 2446688888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+..+++||++++++|.++......+++..+..++.||+.||.|||++||+||||
T Consensus        81 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dl  150 (331)
T 4aaa_A           81 ----LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI  150 (331)
T ss_dssp             ----CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ----CCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCc
Confidence                8999999999999999999999999999888888777777999999999999999999999999999997

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=1.5e-24  Score=165.62  Aligned_cols=131  Identities=17%  Similarity=0.313  Sum_probs=112.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ......++|.+.+.||.|+||.||+|.+.   .++..||||.+...........+.+|+.++..                
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----------------  102 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ----------------  102 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTT----------------
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHh----------------
Confidence            33445568999999999999999999987   45778999998654322333567888888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.+.+.+++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||
T Consensus       103 --------l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  173 (373)
T 2qol_A          103 --------FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL  173 (373)
T ss_dssp             --------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --------CCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCC
Confidence                    899999999999999999999999999999999997654 5999999999999999999999999999997

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=6.2e-24  Score=168.79  Aligned_cols=129  Identities=26%  Similarity=0.418  Sum_probs=114.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ....+.|.+.+.||+|+||.||+|.++.+++.||+|++.+.....  ....+..|..++..                   
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~-------------------  241 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-------------------  241 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-------------------
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHh-------------------
Confidence            345678999999999999999999999999999999997654322  23567789999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+...+|+||||++|++|.+++...    ..+++..++.++.||+.||.|||++||+||||
T Consensus       242 -----l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDL  315 (543)
T 3c4z_A          242 -----VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL  315 (543)
T ss_dssp             -----CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----cCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence                 89999999999999999999999999999999998753    35999999999999999999999999999997

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=4.2e-24  Score=159.54  Aligned_cols=133  Identities=18%  Similarity=0.295  Sum_probs=113.0

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      ........++|.+.+.||.|+||.||+|.+.     .+++.+|+|.+...........+.+|+.+++.            
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------   84 (322)
T 1p4o_A           17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE------------   84 (322)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG------------
T ss_pred             hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHh------------
Confidence            4455667789999999999999999999887     45788999998644322233456778888887            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------CCCCHHHHHHHHHHHHHHHH
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------GSYTEKDASMLIRQVLEAVD  165 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~  165 (177)
                                  ++||||+++++++.+.+..+++||++++++|.+++...          ..+++..+..++.||+.||.
T Consensus        85 ------------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  152 (322)
T 1p4o_A           85 ------------FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA  152 (322)
T ss_dssp             ------------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHH
Confidence                        89999999999999999999999999999999998753          34689999999999999999


Q ss_pred             HHHhCCccccCC
Q psy13106        166 YMHEARYLSKPR  177 (177)
Q Consensus       166 ~LH~~giiH~Dl  177 (177)
                      |||++||+||||
T Consensus       153 ~lH~~~i~H~di  164 (322)
T 1p4o_A          153 YLNANKFVHRDL  164 (322)
T ss_dssp             HHHHTTCBCSCC
T ss_pred             HHHHCCCccCCC
Confidence            999999999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.92  E-value=1.1e-23  Score=155.94  Aligned_cols=131  Identities=27%  Similarity=0.492  Sum_probs=113.2

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .......++|.+.+.||.|+||.||+|.+..+++.+++|++.... ......+.+|+.++..                  
T Consensus        12 ~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~------------------   72 (302)
T 2j7t_A           12 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILAT------------------   72 (302)
T ss_dssp             BSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHH------------------
T ss_pred             ccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhc------------------
Confidence            344567789999999999999999999999999999999986543 2233567788888888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++...+.++++||++++++|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus        73 ------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  143 (302)
T 2j7t_A           73 ------CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDL  143 (302)
T ss_dssp             ------CCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ------CCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence                  8999999999999999999999999999999998875 456999999999999999999999999999997

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=5.3e-24  Score=160.04  Aligned_cols=134  Identities=22%  Similarity=0.379  Sum_probs=112.6

Q ss_pred             CcccCcccccceEEEeeecccceeEEEEEEEe-------cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccc
Q psy13106         20 NEIKGPSIEEKYILKELLGTGAFSEVRLAESR-------ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        20 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      .........++|.+.+.||.|+||.||+|.+.       .++..||+|.+...........+.+|+.++..         
T Consensus        26 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------   96 (334)
T 2pvf_A           26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM---------   96 (334)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHH---------
T ss_pred             CCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHH---------
Confidence            34445566789999999999999999999975       35678999998654332333567788888888         


Q ss_pred             cccccCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHH
Q psy13106         93 DETNDNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASM  155 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~  155 (177)
                                     + +||||+++++++.+.+.++++||++++++|.+++....                .++...+..
T Consensus        97 ---------------l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (334)
T 2pvf_A           97 ---------------IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS  161 (334)
T ss_dssp             ---------------HCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred             ---------------hhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence                           5 79999999999999999999999999999999997653                388999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCC
Q psy13106        156 LIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       156 ~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.||+.||.|||++||+||||
T Consensus       162 i~~qi~~aL~~LH~~~ivH~Dl  183 (334)
T 2pvf_A          162 CTYQLARGMEYLASQKCIHRDL  183 (334)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHHHHHHHHHHHhCCeeCCCC
Confidence            9999999999999999999997

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.92  E-value=6.7e-24  Score=160.85  Aligned_cols=136  Identities=20%  Similarity=0.380  Sum_probs=116.1

Q ss_pred             CcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         20 NEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        20 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ....+..+.++|.+.+.||.|+||.||+|.+..+++.||||++....  ........|..++..+...            
T Consensus        26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~------------   91 (360)
T 3llt_A           26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQND------------   91 (360)
T ss_dssp             CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCC------------
T ss_pred             eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhccc------------
Confidence            34667778889999999999999999999999999999999985322  2234566788888874321            


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             .++||||+++++++...+.++++||++ +++|.+++....  .+++..++.++.||+.||+|||++||+||||
T Consensus        92 -------~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  163 (360)
T 3llt_A           92 -------DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDL  163 (360)
T ss_dssp             -------STTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -------CCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence                   146999999999999999999999999 889999997654  4899999999999999999999999999997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.2e-23  Score=153.55  Aligned_cols=126  Identities=25%  Similarity=0.364  Sum_probs=110.8

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||.|+||.||+|.+. +++.+|+|.+.....  ....+.+|+.++..                     
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~---------------------   61 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM--SEEDFIEEAEVMMK---------------------   61 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB--CHHHHHHHHHHHHT---------------------
T ss_pred             EeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc--CHHHHHHHHHHHHh---------------------
Confidence            344568999999999999999999986 467799999865432  33567889999998                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+.+..+++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||
T Consensus        62 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~di  132 (269)
T 4hcu_A           62 ---LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL  132 (269)
T ss_dssp             ---CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCc
Confidence               88999999999999999999999999999999998654 45899999999999999999999999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.92  E-value=2.1e-24  Score=161.71  Aligned_cols=124  Identities=24%  Similarity=0.396  Sum_probs=105.6

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+++.||.|+||.||+|.+..+++.||+|.+...........+.+|+.++..                        +
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~------------------------l   57 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD------------------------L   57 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSC------------------------C
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHh------------------------c
Confidence            5799999999999999999999999999999998654433333344567777776                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+.+.++++|||++ ++|.+++...+ .+++..++.++.||+.||.|||++||+||||
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Di  126 (324)
T 3mtl_A           58 KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL  126 (324)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred             CCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCc
Confidence            99999999999999999999999996 59999887654 4899999999999999999999999999997

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.92  E-value=6.9e-24  Score=158.08  Aligned_cols=138  Identities=24%  Similarity=0.278  Sum_probs=111.1

Q ss_pred             CCCCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccc
Q psy13106         16 DGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        16 ~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      .+.+....+..+.++|.+.+.||.|+||+||+|.+..+++.||||.+........ ......|+..+...          
T Consensus        44 ~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~----------  113 (311)
T 3p1a_A           44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV----------  113 (311)
T ss_dssp             TTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH----------
T ss_pred             CCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh----------
Confidence            3444555666677899999999999999999999999999999998754322111 12233344333331          


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                   ..|+||+++++++.+.+.+|++||++ +++|.+++...+ .+++..++.++.||+.||+|||++||+
T Consensus       114 -------------~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  179 (311)
T 3p1a_A          114 -------------GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV  179 (311)
T ss_dssp             -------------CCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             -------------cCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence                         48999999999999999999999999 669988876544 599999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       180 H~Di  183 (311)
T 3p1a_A          180 HLDV  183 (311)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            9997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=9.4e-24  Score=155.60  Aligned_cols=123  Identities=28%  Similarity=0.415  Sum_probs=107.5

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|+||.||+|.+ .+++.+|+|.+....... ....+.+|+.+++.                        
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~------------------------   56 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKE------------------------   56 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG------------------------
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHh------------------------
Confidence            5799999999999999999998 678899999986543222 23567788888887                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+.+.++++||++++ +|.+++... +.+++..++.++.||+.||.|||++||+||||
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  126 (288)
T 1ob3_A           57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL  126 (288)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            8999999999999999999999999965 999988754 56999999999999999999999999999997

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=4.5e-24  Score=159.96  Aligned_cols=130  Identities=23%  Similarity=0.310  Sum_probs=108.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEE-----EecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      .....++|.+.+.||.|+||.||+|.     ...+++.||||.+...........+.+|+.++..               
T Consensus        25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------------   89 (327)
T 2yfx_A           25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK---------------   89 (327)
T ss_dssp             CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHH---------------
T ss_pred             ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhh---------------
Confidence            34567799999999999999999999     4567889999998644333334567788888888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-------SYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                               ++||||+++++++.+....|++||++++++|.+++....       .++...+..++.||+.||.|||++|
T Consensus        90 ---------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  160 (327)
T 2yfx_A           90 ---------FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  160 (327)
T ss_dssp             ---------CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ---------CCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence                     899999999999999999999999999999999998653       3889999999999999999999999


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+||||
T Consensus       161 i~H~dl  166 (327)
T 2yfx_A          161 FIHRDI  166 (327)
T ss_dssp             CCCSCC
T ss_pred             eecCcC
Confidence            999997

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.92  E-value=1.4e-24  Score=160.59  Aligned_cols=131  Identities=29%  Similarity=0.486  Sum_probs=95.6

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      +.....++|.+.+.||.|+||.||+|.+..+++.||||.+...........+.+|+.++..                   
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-------------------   69 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ-------------------   69 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCC-------------------
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhh-------------------
Confidence            4455677999999999999999999999989999999988654322233445555555554                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--------KGSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                           +.||||+++++++...+..+++||++++++|.+++..        ...+++..+..++.||+.||.|||++||+|
T Consensus        70 -----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H  144 (303)
T 2vwi_A           70 -----CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIH  144 (303)
T ss_dssp             -----CCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             -----cCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence                 8999999999999999999999999999999998864        345899999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       145 ~dl  147 (303)
T 2vwi_A          145 RDV  147 (303)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            997

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.4e-24  Score=161.64  Aligned_cols=139  Identities=25%  Similarity=0.404  Sum_probs=104.7

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhccccccccc
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVHNRLD   93 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~~~   93 (177)
                      ........+.++|.+.+.||.|+||.||+|.+..+++.||+|++.......     ....+..|+.++..+...      
T Consensus        21 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~------   94 (312)
T 2iwi_A           21 PGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG------   94 (312)
T ss_dssp             ------------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS------
T ss_pred             CCccchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc------
Confidence            334456677889999999999999999999999999999999986543221     223456788888773211      


Q ss_pred             ccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEec-cCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106         94 ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMEL-VTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus        94 ~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                                    .+|+||+++++++...+..+++||+ +.+++|.+++.....+++..+..++.||+.||.|||++||
T Consensus        95 --------------~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  160 (312)
T 2iwi_A           95 --------------GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGV  160 (312)
T ss_dssp             --------------CCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTE
T ss_pred             --------------CCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence                          2899999999999988999999999 7889999999888889999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       161 ~H~dl  165 (312)
T 2iwi_A          161 VHRDI  165 (312)
T ss_dssp             ECCCC
T ss_pred             eecCC
Confidence            99997

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=1.7e-24  Score=163.17  Aligned_cols=129  Identities=31%  Similarity=0.582  Sum_probs=111.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc----ccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK----GKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.+|+|++......    .....+.+|+.++..                 
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~-----------------   84 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK-----------------   84 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHH-----------------
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHh-----------------
Confidence            34567899999999999999999999999999999999765322    223567889999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh------------------------------------
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE------------------------------------  144 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------------------------------------  144 (177)
                             ++||||+++++++.+.+..++|||||++++|.+++..                                    
T Consensus        85 -------l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (345)
T 3hko_A           85 -------LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGF  157 (345)
T ss_dssp             -------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--C
T ss_pred             -------CCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence                   8999999999999999999999999999999998842                                    


Q ss_pred             ----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        145 ----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       145 ----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ...+++..++.++.||+.||.|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  194 (345)
T 3hko_A          158 RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI  194 (345)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence                112467888899999999999999999999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=7.8e-24  Score=161.61  Aligned_cols=126  Identities=37%  Similarity=0.648  Sum_probs=105.0

Q ss_pred             cccceEE--EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYIL--KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~--~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....|.+  .+.||.|+||.||+|.+..+++.+|+|++..... .....+.+|+.++..                     
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~---------------------  142 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQ---------------------  142 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTT---------------------
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHh---------------------
Confidence            4445665  6789999999999999999999999999875432 233567889998888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+.+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||
T Consensus       143 ---l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  213 (373)
T 2x4f_A          143 ---LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDL  213 (373)
T ss_dssp             ---CCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence               89999999999999999999999999999999988654 45999999999999999999999999999997

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=1.5e-23  Score=154.79  Aligned_cols=127  Identities=20%  Similarity=0.283  Sum_probs=112.4

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+..+.++|.+.+.||.|+||.||+|.+..+++.||+|++....   ....+.+|+.++..                   
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~-------------------   61 (298)
T 1csn_A            4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKL-------------------   61 (298)
T ss_dssp             --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHH-------------------
T ss_pred             cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHH-------------------
Confidence            45667889999999999999999999999999999999985432   33567888888888                   


Q ss_pred             cccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           + .|++++.+++++.+....+++||++ +++|.+++...+ ++++..+..++.||+.||.|||++||+||||
T Consensus        62 -----l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl  132 (298)
T 1csn_A           62 -----LAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI  132 (298)
T ss_dssp             -----TTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             -----HhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence                 4 7999999999999999999999999 999999998654 5999999999999999999999999999997

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.91  E-value=1.5e-23  Score=156.14  Aligned_cols=129  Identities=22%  Similarity=0.407  Sum_probs=106.7

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .......++|.+.+.||.|+||.||+|.+..+++.||+|.+....   ....+.+|+.++..                  
T Consensus        22 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~------------------   80 (314)
T 3com_A           22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQ------------------   80 (314)
T ss_dssp             --------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHT------------------
T ss_pred             hhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHh------------------
Confidence            334556778999999999999999999999999999999986532   34667889998888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++...+.++++||++++++|.+++. ....+++..+..++.||+.||.|||++||+|+||
T Consensus        81 ------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl  151 (314)
T 3com_A           81 ------CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI  151 (314)
T ss_dssp             ------CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ------CCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCc
Confidence                  899999999999999999999999999999999987 4456999999999999999999999999999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.91  E-value=1.4e-23  Score=152.91  Aligned_cols=126  Identities=21%  Similarity=0.411  Sum_probs=111.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||.|+||.||+|.+. ++..+|+|.+.....  ....+.+|+.++..                     
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~---------------------   59 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM--SEDEFFQEAQTMMK---------------------   59 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB--CHHHHHHHHHHHHH---------------------
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC--cHHHHHHHHHHHHh---------------------
Confidence            345678999999999999999999776 566899999864432  33567889999998                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+.+..+++||++++++|.+++.... .+++..+..++.|++.||.|||++||+||||
T Consensus        60 ---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di  130 (268)
T 3sxs_A           60 ---LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL  130 (268)
T ss_dssp             ---CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred             ---CCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence               889999999999999999999999999999999997654 4999999999999999999999999999997

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.91  E-value=1.7e-23  Score=154.20  Aligned_cols=129  Identities=22%  Similarity=0.327  Sum_probs=112.4

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ......|.+.+.||.|+||.||+|.+..++..+++|.+....... ....+.+|+.+++.                    
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~--------------------   81 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG--------------------   81 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT--------------------
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHh--------------------
Confidence            344557899999999999999999999999999999987554322 23557788888888                    


Q ss_pred             ccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCC
Q psy13106        104 DKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR--YLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~Dl  177 (177)
                          ++||||+++++++..    ...++++|||+++++|.+++.....+++..+..++.||+.||.|||++|  |+||||
T Consensus        82 ----l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~di  157 (290)
T 1t4h_A           82 ----LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL  157 (290)
T ss_dssp             ----CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCC
T ss_pred             ----CCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCC
Confidence                899999999998864    4569999999999999999988888999999999999999999999999  999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.91  E-value=8.6e-24  Score=162.74  Aligned_cols=123  Identities=28%  Similarity=0.549  Sum_probs=104.5

Q ss_pred             ccccceEEE-eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILK-ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.+.|.+. +.||.|+||.||+|.+..+++.||||++..      .....+|+.++...                    
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~--------------------  111 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRA--------------------  111 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHH--------------------
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHh--------------------
Confidence            445567766 789999999999999999999999999852      23456777766442                    


Q ss_pred             cccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .+||||+++++++..    ...+|+|||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||
T Consensus       112 ---~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  187 (400)
T 1nxk_A          112 ---SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV  187 (400)
T ss_dssp             ---TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence               579999999998875    567999999999999999998653  4999999999999999999999999999997

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.1e-23  Score=159.77  Aligned_cols=126  Identities=25%  Similarity=0.527  Sum_probs=111.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .++|.+.+.||.|+||.||+|.+.   .+++.||||++......   .....+.+|+.++..                  
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~------------------  114 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH------------------  114 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHH------------------
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHH------------------
Confidence            368999999999999999999985   47899999998654321   223456678888887                  


Q ss_pred             ccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            + +||||+++++++...+.+++||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus       115 ------l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl  185 (355)
T 1vzo_A          115 ------IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDI  185 (355)
T ss_dssp             ------HHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ------ccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                  5 699999999999999999999999999999999988888999999999999999999999999999997

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=1.2e-23  Score=157.94  Aligned_cols=131  Identities=23%  Similarity=0.345  Sum_probs=112.5

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCc-----EEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGT-----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ......++|.+.+.||.|+||.||+|.+..++.     .+|+|.+...........+.+|+.++..              
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------  105 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH--------------  105 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHH--------------
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHh--------------
Confidence            345556789999999999999999999876654     7999998654433334567889999988              


Q ss_pred             CCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--------------CCCCHHHHHHHHHHHHH
Q psy13106         98 NNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--------------GSYTEKDASMLIRQVLE  162 (177)
Q Consensus        98 ~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~qi~~  162 (177)
                                + +||||+++++++.+.+.++++||++++++|.+++...              ..+++..+..++.||+.
T Consensus       106 ----------l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~  175 (333)
T 2i1m_A          106 ----------LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ  175 (333)
T ss_dssp             ----------HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHH
T ss_pred             ----------hcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHH
Confidence                      6 7999999999999999999999999999999998753              34789999999999999


Q ss_pred             HHHHHHhCCccccCC
Q psy13106        163 AVDYMHEARYLSKPR  177 (177)
Q Consensus       163 ~l~~LH~~giiH~Dl  177 (177)
                      ||.|||++||+||||
T Consensus       176 ~l~~lH~~~ivH~Dl  190 (333)
T 2i1m_A          176 GMAFLASKNCIHRDV  190 (333)
T ss_dssp             HHHHHHHTTEECSCC
T ss_pred             HHHHHhcCCcccCCc
Confidence            999999999999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.91  E-value=9.9e-24  Score=157.79  Aligned_cols=141  Identities=25%  Similarity=0.369  Sum_probs=115.0

Q ss_pred             cCCCCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----cchhHHHHHHHHHhhccccc
Q psy13106         15 KDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----KEDSLENEIKVLRRFSQSVH   89 (177)
Q Consensus        15 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~e~~~~~~~~~~~~   89 (177)
                      ..........+.+.++|.+.+.||.|+||.||+|.+..+++.||||.+.......     ....+..|+.++..+.    
T Consensus        29 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----  104 (320)
T 3a99_A           29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS----  104 (320)
T ss_dssp             -----------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHC----
T ss_pred             hhccCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhc----
Confidence            3344445666778889999999999999999999999999999999997654322     2245678888888832    


Q ss_pred             ccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCC-cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         90 NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                        ..|+||+++++++...+..+++||++.+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus       105 ------------------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH  166 (320)
T 3a99_A          105 ------------------SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH  166 (320)
T ss_dssp             ------------------SSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------cCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence                              1479999999999999999999999976 899999988888999999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       167 ~~~ivH~Dl  175 (320)
T 3a99_A          167 NCGVLHRDI  175 (320)
T ss_dssp             HTTEECCCC
T ss_pred             HCCcEeCCC
Confidence            999999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.91  E-value=1.5e-23  Score=155.86  Aligned_cols=132  Identities=26%  Similarity=0.392  Sum_probs=107.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +....++|.+.+.||.|+||.||+|.+..+++.||+|.+.......    ......+|+.+++.+..             
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------------   70 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA-------------   70 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHH-------------
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhh-------------
Confidence            4566789999999999999999999999999999999987543211    12456778888777433             


Q ss_pred             CcccccccCCCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                              ++||||+++++++....     .++++||++. ++|.+++.....  +++..++.++.||+.||+|||++||
T Consensus        71 --------~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  141 (308)
T 3g33_A           71 --------FEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCI  141 (308)
T ss_dssp             --------HCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             --------cCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence                    57999999999998654     5899999996 599999987654  8999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       142 vH~Dl  146 (308)
T 3g33_A          142 VHRDL  146 (308)
T ss_dssp             CCSCC
T ss_pred             ccCCC
Confidence            99997

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=7.5e-24  Score=158.27  Aligned_cols=135  Identities=26%  Similarity=0.355  Sum_probs=110.8

Q ss_pred             CCCcccCcccccce-EEEeeecccceeEEEEEEE----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccc
Q psy13106         18 KDNEIKGPSIEEKY-ILKELLGTGAFSEVRLAES----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        18 ~~~~~~~~~~~~~y-~~~~~lg~g~~g~v~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      ...+.....+.++| ++++.||.|+||.||++.+    ..+++.||||++...........+.+|+.+++.         
T Consensus        19 ~~~pg~~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------   89 (318)
T 3lxp_A           19 FQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT---------   89 (318)
T ss_dssp             -----CCCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHH---------
T ss_pred             ecCCCCCceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHh---------
Confidence            33445556677777 9999999999999988764    357889999999755332334567889999998         


Q ss_pred             cccccCCCcccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106         93 DETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                                     ++||||+++++++.+  ...++++||++++++|.+++.... +++..+..++.||+.||.|||++
T Consensus        90 ---------------l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~  153 (318)
T 3lxp_A           90 ---------------LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ  153 (318)
T ss_dssp             ---------------CCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---------------CCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC
Confidence                           899999999999986  467999999999999999987654 99999999999999999999999


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       154 ~ivH~Di  160 (318)
T 3lxp_A          154 HYIHRDL  160 (318)
T ss_dssp             TEECSCC
T ss_pred             CccCCCC
Confidence            9999997

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.91  E-value=8.7e-24  Score=172.10  Aligned_cols=129  Identities=24%  Similarity=0.402  Sum_probs=112.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||||++.+...  .........|..++...                   
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~-------------------  398 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP-------------------  398 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCT-------------------
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhc-------------------
Confidence            345689999999999999999999999999999999976432  22234566777777652                   


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ..|++|+.+++++.+.+.+|+||||+++++|.+++...+.+++..++.++.||+.||+|||++|||||||
T Consensus       399 ----~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDL  468 (674)
T 3pfq_A          399 ----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL  468 (674)
T ss_dssp             ----TCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCC
T ss_pred             ----cCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccC
Confidence                3799999999999999999999999999999999998888999999999999999999999999999997

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.91  E-value=3.3e-23  Score=154.95  Aligned_cols=130  Identities=22%  Similarity=0.424  Sum_probs=113.3

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .......++|.+.+.||.|+||.||+|.+..+++.+|+|++....  .....+.+|+.++..                  
T Consensus        17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~------------------   76 (326)
T 2x7f_A           17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKK------------------   76 (326)
T ss_dssp             CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHH------------------
T ss_pred             hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHh------------------
Confidence            344456779999999999999999999999999999999986432  234667888888888                  


Q ss_pred             ccccccC-CCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        102 DKDKERL-THPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       102 ~~~~~~~-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                            + .||||+++++++..      ...++++||++++++|.+++...  ..+++..++.++.||+.||.|||++||
T Consensus        77 ------l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  150 (326)
T 2x7f_A           77 ------YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV  150 (326)
T ss_dssp             ------HCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ------ccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence                  5 79999999999976      46899999999999999999764  458999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +|+||
T Consensus       151 vH~dl  155 (326)
T 2x7f_A          151 IHRDI  155 (326)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            99997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.91  E-value=1.5e-23  Score=159.36  Aligned_cols=135  Identities=22%  Similarity=0.375  Sum_probs=112.2

Q ss_pred             CCCCcccCcccc--cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccc
Q psy13106         17 GKDNEIKGPSIE--EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        17 ~~~~~~~~~~~~--~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      +.+....++.+.  ++|++++.||.|+||.||+|.+..+++.||||.+...........+.+|+.++..           
T Consensus        13 ~~~~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-----------   81 (364)
T 3qyz_A           13 AGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR-----------   81 (364)
T ss_dssp             --CCBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHH-----------
T ss_pred             cceEEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHh-----------
Confidence            344444555544  6899999999999999999999999999999998654333333567789999988           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                                   ++||||+++++++...     ..+|++||++. ++|.+++... .+++..+..++.||+.||.|||+
T Consensus        82 -------------l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~  146 (364)
T 3qyz_A           82 -------------FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS  146 (364)
T ss_dssp             -------------CCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------cCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence                         8999999999998654     46899999996 5999988664 59999999999999999999999


Q ss_pred             CCccccCC
Q psy13106        170 ARYLSKPR  177 (177)
Q Consensus       170 ~giiH~Dl  177 (177)
                      +||+||||
T Consensus       147 ~~ivH~Di  154 (364)
T 3qyz_A          147 ANVLHRDL  154 (364)
T ss_dssp             TTEECCCC
T ss_pred             CCeecCCC
Confidence            99999997

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.91  E-value=1.7e-23  Score=165.13  Aligned_cols=128  Identities=21%  Similarity=0.349  Sum_probs=113.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....+.|.+.+.||.|+||.||+|.+..++..||||.+....  .....+.+|+.+++.                    
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~--------------------  272 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKE--------------------  272 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHH--------------------
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHh--------------------
Confidence            3445668999999999999999999999999999999986432  234668889999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+...+|+||||+++++|.+++...  ..+++..+..++.||+.||+|||++||+||||
T Consensus       273 ----l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  344 (495)
T 1opk_A          273 ----IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL  344 (495)
T ss_dssp             ----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----cCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence                89999999999999999999999999999999999764  34899999999999999999999999999997

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.91  E-value=1.8e-23  Score=158.88  Aligned_cols=127  Identities=17%  Similarity=0.186  Sum_probs=107.2

Q ss_pred             ccccceEEEeeecccceeEEEEEE-----EecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAE-----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...++|.+.+.||.|+||.||+|.     +..+++.||+|++...    ....+..|..++..+..              
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~--------------  123 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKP--------------  123 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCG--------------
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhh--------------
Confidence            345689999999999999999994     6678899999998543    23456777877777432              


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-----KGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                             ..|+|++.+++++...+..|+|||||++|+|.+++..     ...+++..+..++.||+.||+|||++||+||
T Consensus       124 -------~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHr  196 (365)
T 3e7e_A          124 -------SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG  196 (365)
T ss_dssp             -------GGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred             -------hhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecC
Confidence                   4599999999999999999999999999999999973     4569999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       197 Di  198 (365)
T 3e7e_A          197 DI  198 (365)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=1.4e-23  Score=154.08  Aligned_cols=129  Identities=22%  Similarity=0.328  Sum_probs=108.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .....++|.+.+.||.|+||.||+|.+..+   +..+++|.+...........+.+|+.++..                 
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-----------------   72 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-----------------   72 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-----------------
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHh-----------------
Confidence            455677999999999999999999998654   456999987543322233567788888888                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++. .+..|++||++++++|.+++.... .+++..+..++.|++.||.|||++||+||||
T Consensus        73 -------l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  142 (281)
T 1mp8_A           73 -------FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI  142 (281)
T ss_dssp             -------CCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -------CCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence                   89999999999984 567899999999999999997654 5999999999999999999999999999997

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.91  E-value=1.6e-23  Score=159.38  Aligned_cols=128  Identities=34%  Similarity=0.593  Sum_probs=112.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------chhHHHHHHHHHhhcccccccccccccC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------EDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||++........       ...+.+|+.++..               
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~---------------  155 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ---------------  155 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHH---------------
Confidence            344689999999999999999999998999999999865432111       2345678888877               


Q ss_pred             CCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               + +||||+++++++......|+||||+++++|.+++.....+++..+..++.||+.||.|||+.||+|+||
T Consensus       156 ---------l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dl  226 (365)
T 2y7j_A          156 ---------VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDL  226 (365)
T ss_dssp             ---------HTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---------hcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                     5 799999999999999999999999999999999988888999999999999999999999999999997

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=2.1e-23  Score=153.42  Aligned_cols=131  Identities=20%  Similarity=0.357  Sum_probs=111.3

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc------hhHHHHHHHHHhhcccccccccc
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE------DSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~------~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      ...+....++|.+.+.||.|+||.||+|.+..+++.||+|.+.........      ..+.+|+.++..           
T Consensus        11 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----------   79 (287)
T 4f0f_A           11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-----------   79 (287)
T ss_dssp             -CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTT-----------
T ss_pred             hhhhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHh-----------
Confidence            344556678999999999999999999999999999999998654332211      467788888888           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEAR--  171 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~g--  171 (177)
                                   ++||||+++++++.+..  +++|||+++++|.+.+... ..+++..+..++.|++.||+|||++|  
T Consensus        80 -------------l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~  144 (287)
T 4f0f_A           80 -------------LNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP  144 (287)
T ss_dssp             -------------CCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred             -------------CCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence                         89999999999987665  6899999999999888654 46999999999999999999999999  


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+||||
T Consensus       145 ivH~di  150 (287)
T 4f0f_A          145 IVHRDL  150 (287)
T ss_dssp             CBCSCC
T ss_pred             eecCCC
Confidence            999997

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.91  E-value=2.1e-23  Score=157.43  Aligned_cols=126  Identities=22%  Similarity=0.302  Sum_probs=109.7

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||.|+||.||++.+. +++.||||.+....... ....+.+|+.++..                     
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   63 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK---------------------   63 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHH---------------------
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHh---------------------
Confidence            45678999999999999999999884 58899999987543222 22567789999988                     


Q ss_pred             cccCCC--CCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTH--PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.|  +||+++++++.+...++++||+ .+++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        64 ---l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDi  134 (343)
T 3dbq_A           64 ---LQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDL  134 (343)
T ss_dssp             ---HTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ---hhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence               544  9999999999999999999995 58899999998888999999999999999999999999999997

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.91  E-value=2.3e-23  Score=155.98  Aligned_cols=124  Identities=23%  Similarity=0.404  Sum_probs=110.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ...|...+.||+|+||.||+|.+..+++.||||++.... ......+.+|+.++..                        
T Consensus        44 ~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~------------------------   98 (321)
T 2c30_A           44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRD------------------------   98 (321)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTT------------------------
T ss_pred             hhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHh------------------------
Confidence            345888899999999999999999899999999986543 2233567788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++...+..+++|||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||
T Consensus        99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl  167 (321)
T 2c30_A           99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDI  167 (321)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            8999999999999999999999999999999998865 45999999999999999999999999999997

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.9e-23  Score=157.04  Aligned_cols=130  Identities=16%  Similarity=0.291  Sum_probs=110.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCC----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENG----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      .....++|.+.+.||+|+||.||+|.+..++    ..+|+|.+...........+.+|+.++..                
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~----------------  102 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ----------------  102 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT----------------
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHh----------------
Confidence            3455678999999999999999999987553    35999998654322233457788888888                


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              ++||||+++++++.+.+.++++||++++++|.+++... ..+++..+..++.||+.||.|||++||+||||
T Consensus       103 --------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  173 (333)
T 1mqb_A          103 --------FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDL  173 (333)
T ss_dssp             --------CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --------CCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence                    89999999999999999999999999999999999764 56999999999999999999999999999997

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.91  E-value=4.3e-23  Score=152.86  Aligned_cols=126  Identities=28%  Similarity=0.539  Sum_probs=107.5

Q ss_pred             cCcccccceEEE-eeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILK-ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.++|.+. +.||.|+||.||+|.+..+++.||+|++..      .....+|+.++...                 
T Consensus        11 ~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~-----------------   67 (299)
T 3m2w_A           11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRA-----------------   67 (299)
T ss_dssp             BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHH-----------------
T ss_pred             cccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHh-----------------
Confidence            344555667776 789999999999999999999999999853      23456777776442                 


Q ss_pred             ccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        102 DKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                            .+||||+++++++..    ...++++|||+++++|.+++....  .+++..++.++.|++.||.|||++||+||
T Consensus        68 ------~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~  141 (299)
T 3m2w_A           68 ------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR  141 (299)
T ss_dssp             ------TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             ------ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence                  689999999999876    678999999999999999998754  59999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       142 dl  143 (299)
T 3m2w_A          142 DV  143 (299)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.91  E-value=1.4e-23  Score=157.47  Aligned_cols=134  Identities=28%  Similarity=0.459  Sum_probs=115.6

Q ss_pred             cccCcccccceEEE-eeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccC
Q psy13106         21 EIKGPSIEEKYILK-ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        21 ~~~~~~~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ....+.+.++|.+. +.||.|+||.||+|.+..+++.||+|++....... ....+.+|+.++..+              
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--------------   85 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA--------------   85 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHT--------------
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhc--------------
Confidence            44556677889988 89999999999999999999999999997654322 235677888888872              


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                               ..||||+++++++.+...++++|||+++++|.+++...  ..+++..++.++.||+.||+|||++||+|||
T Consensus        86 ---------~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~D  156 (327)
T 3lm5_A           86 ---------KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLD  156 (327)
T ss_dssp             ---------TTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ---------cCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence                     25799999999999999999999999999999988643  5699999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       157 i  157 (327)
T 3lm5_A          157 L  157 (327)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.91  E-value=1.8e-23  Score=155.83  Aligned_cols=126  Identities=25%  Similarity=0.436  Sum_probs=107.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||++.+..+++.||+|.+.... ......+.+|+.++..                       
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-----------------------   82 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRL-----------------------   82 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHT-----------------------
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhh-----------------------
Confidence            3468999999999999999999999999999999986432 2233567788888888                       


Q ss_pred             cCCCCCceeeEEEEe----cCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFE----DKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.    .....+++||++++++|.+++..    ...+++..++.++.||+.||.|||++||+||||
T Consensus        83 -l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dl  160 (317)
T 2buj_A           83 -FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDL  160 (317)
T ss_dssp             -CCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -cCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence             89999999999886    33578999999999999998875    356999999999999999999999999999997

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=1.9e-23  Score=153.23  Aligned_cols=125  Identities=25%  Similarity=0.431  Sum_probs=109.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +..+..+|.+.+.||.|+||.||+|.+..+++.+|+|.+...     ...+.+|+.++..                    
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~e~~~l~~--------------------   60 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----NEKAEREVKALAK--------------------   60 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-----SGGGHHHHHHHHH--------------------
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-----cHHHHHHHHHHHh--------------------
Confidence            345667899999999999999999999999999999998643     2456789999988                    


Q ss_pred             ccccCCCCCceeeEEEEec----------------CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q psy13106        104 DKERLTHPNIVQLIETFED----------------KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVD  165 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~  165 (177)
                          ++||||+++++++..                ...++++|||+++++|.+++...  ..+++..+..++.||+.||.
T Consensus        61 ----l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  136 (284)
T 2a19_B           61 ----LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD  136 (284)
T ss_dssp             ----CCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence                899999999998854                34589999999999999999754  46999999999999999999


Q ss_pred             HHHhCCccccCC
Q psy13106        166 YMHEARYLSKPR  177 (177)
Q Consensus       166 ~LH~~giiH~Dl  177 (177)
                      |||++||+|+||
T Consensus       137 ~lH~~~i~H~dl  148 (284)
T 2a19_B          137 YIHSKKLINRDL  148 (284)
T ss_dssp             HHHHTTEECSCC
T ss_pred             HHHhCCeeeccC
Confidence            999999999997

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.91  E-value=1.2e-23  Score=153.28  Aligned_cols=127  Identities=14%  Similarity=0.212  Sum_probs=107.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ....++|.+.+.||.|+||.||+|.+.  ++.+|+|++....... ....+.+|+.++..                    
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   63 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRI--------------------   63 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCC--------------------
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHh--------------------
Confidence            445678999999999999999999985  7889999986543221 12345666666655                    


Q ss_pred             ccccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEAR--YLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~Dl  177 (177)
                          ++||||+++++++.+.  +..+++|||+++++|.+++....  .+++..+..++.||+.||.|||++|  |+||||
T Consensus        64 ----l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~di  139 (271)
T 3kmu_A           64 ----FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHAL  139 (271)
T ss_dssp             ----CSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCC
T ss_pred             ----cCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence                8899999999999876  78999999999999999998765  4899999999999999999999999  999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.91  E-value=1.3e-23  Score=157.03  Aligned_cols=131  Identities=15%  Similarity=0.338  Sum_probs=100.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ......++|.+.+.||.|+||.||+|.+..++.   .+|||++....... ....+.+|+.+++.               
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~---------------   81 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE---------------   81 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTT---------------
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHH---------------
Confidence            344556789999999999999999999887665   89999986543222 23567788888888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeE------EEEEeccCCcchhHHHHhcC------CCCHHHHHHHHHHHHHHHHH
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKV------YLVMELVTGGELFDRIVEKG------SYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~  166 (177)
                               ++||||+++++++......      +++|||+++++|.+++....      .+++..+..++.||+.||.|
T Consensus        82 ---------l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~  152 (323)
T 3qup_A           82 ---------FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY  152 (323)
T ss_dssp             ---------CCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHH
Confidence                     8999999999999876554      99999999999999886432      58999999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||++||+||||
T Consensus       153 LH~~~ivH~Di  163 (323)
T 3qup_A          153 LSSRNFIHRDL  163 (323)
T ss_dssp             HHHTTCCCSCC
T ss_pred             HHcCCcccCCC
Confidence            99999999997

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=3.5e-23  Score=156.64  Aligned_cols=127  Identities=23%  Similarity=0.390  Sum_probs=110.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.|.+.+.||.|+||.||+|.+..+++.||||.+.......  ....+.+|+.++..                    
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~--------------------  110 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK--------------------  110 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHH--------------------
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHh--------------------
Confidence            34567999999999999999999999999999999986543221  12457789999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+..++||||+. |+|.+++. ....+++..+..++.|++.||.|||++||+||||
T Consensus       111 ----l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  180 (348)
T 1u5q_A          111 ----LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV  180 (348)
T ss_dssp             ----CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ----CCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence                899999999999999999999999996 58888775 4456999999999999999999999999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.90  E-value=2.4e-23  Score=152.44  Aligned_cols=127  Identities=24%  Similarity=0.406  Sum_probs=109.3

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ..++|.+.+.||.|+||.||++.+..+++.+++|.+....... ....+.+|+.++..                      
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~----------------------   61 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE----------------------   61 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHH----------------------
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHh----------------------
Confidence            4568999999999999999999999999999999997543222 23557788888888                      


Q ss_pred             ccCCCCCceeeEEEEe--cCCeEEEEEeccCCcchhHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccc
Q psy13106        106 ERLTHPNIVQLIETFE--DKHKVYLVMELVTGGELFDRIVEK----GSYTEKDASMLIRQVLEAVDYMHEAR-----YLS  174 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~g-----iiH  174 (177)
                        ++||||+++++++.  .+..++++|||+++++|.+++...    ..+++..+..++.|++.||.|||++|     |+|
T Consensus        62 --l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH  139 (279)
T 2w5a_A           62 --LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH  139 (279)
T ss_dssp             --CCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CC
T ss_pred             --cCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEE
Confidence              89999999999874  467899999999999999998753    24899999999999999999999999     999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       140 ~dl  142 (279)
T 2w5a_A          140 RDL  142 (279)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            997

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=6.8e-23  Score=149.09  Aligned_cols=124  Identities=25%  Similarity=0.374  Sum_probs=110.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||+|.+. +++.+++|.+.....  ....+.+|+.++..                       
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~-----------------------   59 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM--SEEDFIEEAEVMMK-----------------------   59 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB--CHHHHHHHHHHHHT-----------------------
T ss_pred             chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC--CHHHHHHHHHHHHh-----------------------
Confidence            3568999999999999999999986 567899999865432  23567889998888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+.+..+++||++++++|.+++... ..+++..+..++.|++.||.|||++||+||||
T Consensus        60 -l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  130 (267)
T 3t9t_A           60 -LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL  130 (267)
T ss_dssp             -CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             -CCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence             89999999999999999999999999999999999765 45899999999999999999999999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.90  E-value=4.4e-23  Score=155.95  Aligned_cols=127  Identities=27%  Similarity=0.379  Sum_probs=108.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||+|.+....... ....+.+|+.++..                     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   72 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL---------------------   72 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHH---------------------
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHh---------------------
Confidence            45678999999999999999999999999999999986543322 23467789999998                     


Q ss_pred             cccCCCCCceeeEEEEec--------CCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        105 KERLTHPNIVQLIETFED--------KHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                         ++||||+++++++..        .+.+|+||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||
T Consensus        73 ---l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~  148 (351)
T 3mi9_A           73 ---LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR  148 (351)
T ss_dssp             ---CCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             ---ccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence               899999999999876        4568999999965 777766543 569999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       149 Dl  150 (351)
T 3mi9_A          149 DM  150 (351)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.3e-23  Score=160.06  Aligned_cols=127  Identities=22%  Similarity=0.378  Sum_probs=103.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                    
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   80 (367)
T 1cm8_A           21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH--------------------   80 (367)
T ss_dssp             ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHH--------------------
T ss_pred             eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHh--------------------
Confidence            345678999999999999999999999999999999985432211 22456789999988                    


Q ss_pred             ccccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++...      ..+|++||++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||
T Consensus        81 ----l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dl  154 (367)
T 1cm8_A           81 ----MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDL  154 (367)
T ss_dssp             ----CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----CCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence                8999999999999765      3469999999 8899998876 46999999999999999999999999999997

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.90  E-value=4.6e-23  Score=154.62  Aligned_cols=127  Identities=19%  Similarity=0.284  Sum_probs=102.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEE----EEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMF----AVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.+    ++|.+...........+.+|+.++..                  
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------   73 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS------------------   73 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHH------------------
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHh------------------
Confidence            44568999999999999999999988776654    77766443333334678889999998                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++.++. .+++++++.+++|.+++... ..+++..+..++.||+.||.|||++||+||||
T Consensus        74 ------l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Di  143 (327)
T 3poz_A           74 ------VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL  143 (327)
T ss_dssp             ------CCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ------CCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCC
Confidence                  89999999999998654 77889999999999998764 56999999999999999999999999999997

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=2.2e-23  Score=159.73  Aligned_cols=127  Identities=26%  Similarity=0.406  Sum_probs=100.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ......+|+.++..                    
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~--------------------   64 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE--------------------   64 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHH--------------------
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHh--------------------
Confidence            345678999999999999999999999999999999985432211 22456788888887                    


Q ss_pred             ccccCC-CCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLT-HPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          +. ||||+++++++...  ..+|+|||||+ ++|.+++... .+++..+..++.||+.||+|||++||+||||
T Consensus        65 ----l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  135 (388)
T 3oz6_A           65 ----LSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDM  135 (388)
T ss_dssp             ----TTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----ccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence                55 99999999999754  37999999996 5899988764 5999999999999999999999999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.90  E-value=1.4e-23  Score=156.25  Aligned_cols=132  Identities=21%  Similarity=0.296  Sum_probs=110.9

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      .......++|.+.+.||.|+||.||+|.+.     .+++.||+|.+...........+.+|+.++..             
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------   86 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-------------   86 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH-------------
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHh-------------
Confidence            344556779999999999999999999864     45689999998654433333567788888888             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecC-CeEEEEEeccCCcchhHHHHhcCC----------------CCHHHHHHHHH
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDK-HKVYLVMELVTGGELFDRIVEKGS----------------YTEKDASMLIR  158 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~  158 (177)
                                 + +||||+++++++... ..++++|||+++++|.+++.....                +++..+..++.
T Consensus        87 -----------l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (316)
T 2xir_A           87 -----------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF  155 (316)
T ss_dssp             -----------HCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHH
T ss_pred             -----------cccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHH
Confidence                       5 699999999998765 459999999999999999986543                88999999999


Q ss_pred             HHHHHHHHHHhCCccccCC
Q psy13106        159 QVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       159 qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+.||.|||++||+||||
T Consensus       156 qi~~al~~lH~~~i~H~di  174 (316)
T 2xir_A          156 QVAKGMEFLASRKCIHRDL  174 (316)
T ss_dssp             HHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHHHhCCcccccC
Confidence            9999999999999999997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=4.3e-23  Score=157.87  Aligned_cols=122  Identities=26%  Similarity=0.385  Sum_probs=101.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||||.+....     ....+|+.+++.                      
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~E~~il~~----------------------   56 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKV----------------------   56 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHTT----------------------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHH----------------------
Confidence            34568999999999999999999999999999999885432     223468888888                      


Q ss_pred             ccCCCCCceeeEEEEe--------------------------------------cCCeEEEEEeccCCcchhHHHH----
Q psy13106        106 ERLTHPNIVQLIETFE--------------------------------------DKHKVYLVMELVTGGELFDRIV----  143 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~--------------------------------------~~~~~~lv~e~~~~~~L~~~l~----  143 (177)
                        ++||||+++++++.                                      ...++++||||++ ++|.+.+.    
T Consensus        57 --l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~  133 (383)
T 3eb0_A           57 --LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR  133 (383)
T ss_dssp             --CCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHH
T ss_pred             --cCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh
Confidence              89999999999984                                      3345899999997 47776654    


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        144 EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       144 ~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ....+++..++.++.||+.||.|||++||+||||
T Consensus       134 ~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Di  167 (383)
T 3eb0_A          134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDI  167 (383)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCcc
Confidence            3466999999999999999999999999999997

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.90  E-value=1.4e-23  Score=158.30  Aligned_cols=130  Identities=17%  Similarity=0.336  Sum_probs=113.9

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccc----------------hhHHHHHHHHHhhc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE----------------DSLENEIKVLRRFS   85 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~----------------~~~~~e~~~~~~~~   85 (177)
                      ...+...++|.+.+.||.|+||.||+|.+  +++.||+|.+.........                ..+.+|+.++..  
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--   99 (348)
T 2pml_X           24 KEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD--   99 (348)
T ss_dssp             SSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTT--
T ss_pred             hhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHh--
Confidence            34455667999999999999999999998  8999999999765433221                667889998888  


Q ss_pred             ccccccccccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHH------HHh--cCCCCHHHHHHHH
Q psy13106         86 QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR------IVE--KGSYTEKDASMLI  157 (177)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~--~~~~~~~~~~~~~  157 (177)
                                            ++||||+++++++.+.+.++++|||+++++|.++      +..  ...+++..+..++
T Consensus       100 ----------------------l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~  157 (348)
T 2pml_X          100 ----------------------IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII  157 (348)
T ss_dssp             ----------------------CCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHH
T ss_pred             ----------------------CCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHH
Confidence                                  8999999999999999999999999999999998      655  4569999999999


Q ss_pred             HHHHHHHHHHHh-CCccccCC
Q psy13106        158 RQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       158 ~qi~~~l~~LH~-~giiH~Dl  177 (177)
                      .||+.||.|||+ +||+||||
T Consensus       158 ~qi~~~l~~lH~~~~i~H~dl  178 (348)
T 2pml_X          158 KSVLNSFSYIHNEKNICHRDV  178 (348)
T ss_dssp             HHHHHHHHHHHHTSCEECCCC
T ss_pred             HHHHHHHHHHhccCCEeecCC
Confidence            999999999999 99999997

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.90  E-value=6.4e-23  Score=151.60  Aligned_cols=124  Identities=25%  Similarity=0.390  Sum_probs=107.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+.+.||.|+||.||+|.+..+++.+|+|.+....... ....+.+|+.++..                        
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~------------------------   58 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------------------------   58 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTT------------------------
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHH------------------------
Confidence            57999999999999999999999999999999986543222 23567788888888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++...+..+++||++. ++|.+++...  ..+++..+..++.|++.||.|||++||+||||
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  129 (299)
T 2r3i_A           59 LNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  129 (299)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             cCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence            899999999999999999999999996 5999988765  45899999999999999999999999999997

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.90  E-value=3e-23  Score=155.44  Aligned_cols=127  Identities=19%  Similarity=0.280  Sum_probs=107.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcE----EEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTM----FAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ...++|++.+.||.|+||.||+|.+..+++.    +++|.+...........+.+|+.++..                  
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~------------------   71 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS------------------   71 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHT------------------
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhc------------------
Confidence            3456899999999999999999999887776    667766443323333566778888887                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++. ....+++|||+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||
T Consensus        72 ------l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Di  141 (325)
T 3kex_A           72 ------LDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNL  141 (325)
T ss_dssp             ------CCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ------CCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence                  89999999999886 46689999999999999998764 46999999999999999999999999999997

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.90  E-value=4.6e-23  Score=158.19  Aligned_cols=126  Identities=21%  Similarity=0.302  Sum_probs=108.7

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .+.|.+.+.||.|+||.||+|.+.. ++.||||++....... ....+.+|+.++..+.                     
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~---------------------  112 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ---------------------  112 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT---------------------
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcc---------------------
Confidence            4569999999999999999998865 8899999997544322 2356788999998832                     


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       -.|+||+++++++...+.+|+||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus       113 -~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDl  181 (390)
T 2zmd_A          113 -QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDL  181 (390)
T ss_dssp             -TTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred             -cCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence             136999999999999999999999 558899999998888999999999999999999999999999997

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.90  E-value=5.1e-23  Score=151.83  Aligned_cols=126  Identities=25%  Similarity=0.382  Sum_probs=107.2

Q ss_pred             cccceEEEe-eecccceeEEEEEEE--ecCCcEEEEEEEeccccccc-chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         27 IEEKYILKE-LLGTGAFSEVRLAES--RENGTMFAVKIIDKKALKGK-EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        27 ~~~~y~~~~-~lg~g~~g~v~~~~~--~~~~~~~avK~i~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..++|.+.+ .||.|+||.||+|.+  ..+++.+|||++........ ...+.+|+.++..                   
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-------------------   74 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-------------------   74 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHT-------------------
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHh-------------------
Confidence            345899988 999999999999965  45678999999865432222 3567788888888                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++ ..+..+++||++++++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        75 -----l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~di  143 (291)
T 1xbb_A           75 -----LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL  143 (291)
T ss_dssp             -----CCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -----CCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCC
Confidence                 8999999999998 56778999999999999999998888999999999999999999999999999997

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.90  E-value=3.6e-23  Score=152.82  Aligned_cols=125  Identities=25%  Similarity=0.430  Sum_probs=108.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.++|.+.+.||.|+||.||+|.+..+++.+|+|.+....  .....+.+|+.++..                       
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~-----------------------   58 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLAS-----------------------   58 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTT-----------------------
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHh-----------------------
Confidence            4568999999999999999999999999999999985432  223567788888888                       


Q ss_pred             cCCCCCceeeEEEEec-------------CCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        107 RLTHPNIVQLIETFED-------------KHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                       ++||||+++++++.+             ...+|++||++++++|.+++.... .+++..++.++.|++.||+|||++||
T Consensus        59 -l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  137 (303)
T 1zy4_A           59 -LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI  137 (303)
T ss_dssp             -CCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             -cCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCe
Confidence             899999999998754             356899999999999999997543 57889999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       138 ~H~dl  142 (303)
T 1zy4_A          138 IHRDL  142 (303)
T ss_dssp             CCSCC
T ss_pred             ecccC
Confidence            99997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.1e-23  Score=171.81  Aligned_cols=129  Identities=23%  Similarity=0.331  Sum_probs=106.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEec-CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRE-NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .++.+.++|.+.+.||.|+||.||++.+.. +++.|+||.+...........+.+|+.++..                  
T Consensus        74 ~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------  135 (681)
T 2pzi_A           74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE------------------  135 (681)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGG------------------
T ss_pred             CCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHh------------------
Confidence            455677899999999999999999999976 6899999988543222222445677777766                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCe-----EEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHK-----VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                            ++||||+++++++...+.     .|+||||+++++|.+++..  .+++..+..++.||+.||.|||++||||||
T Consensus       136 ------l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrD  207 (681)
T 2pzi_A          136 ------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYND  207 (681)
T ss_dssp             ------CCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ------cCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Confidence                  899999999999986654     7999999999999987755  699999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       208 l  208 (681)
T 2pzi_A          208 L  208 (681)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.90  E-value=7.3e-23  Score=153.31  Aligned_cols=122  Identities=29%  Similarity=0.415  Sum_probs=108.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|++.+.||.|+||.||+|.+..+++.||+|++...    ....+.+|+.++..                     
T Consensus        32 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~---------------------   86 (330)
T 3nsz_A           32 WGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILEN---------------------   86 (330)
T ss_dssp             CEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHH---------------------
T ss_pred             ccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHH---------------------
Confidence            34457899999999999999999999999999999998532    23567889999988                     


Q ss_pred             cccCC-CCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLT-HPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +. ||||+++++++.+  ....+++||++++++|.+++..   +++..++.++.||+.||+|||++||+||||
T Consensus        87 ---l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Di  156 (330)
T 3nsz_A           87 ---LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDV  156 (330)
T ss_dssp             ---HTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---cCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence               54 9999999999987  6779999999999999988743   899999999999999999999999999997

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.90  E-value=4.5e-23  Score=156.76  Aligned_cols=138  Identities=16%  Similarity=0.253  Sum_probs=107.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      +...++|.+.+.||.|+||.||+|.+..+     ++.||||++....     .....|+.++......         ...
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~~~~~~~~---------~~~   96 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN-----GPLFTELKFYQRAAKP---------EQI   96 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC-----HHHHHHHHHHHHHCCH---------HHH
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc-----hhHHHHHHHHHhhhhh---------HHH
Confidence            34445999999999999999999998764     5789999985432     3455566665553321         011


Q ss_pred             CcccccccCCCCCceeeEEEEecC----CeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDK----HKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLS  174 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH  174 (177)
                      .+....+.++|+||+++++++...    ...|++|||+ +++|.+++... ..+++..+..++.||+.||+|||++||+|
T Consensus        97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiH  175 (364)
T 3op5_A           97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVH  175 (364)
T ss_dssp             HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEE
Confidence            122223347899999999998754    5689999999 99999999765 56999999999999999999999999999


Q ss_pred             cCC
Q psy13106        175 KPR  177 (177)
Q Consensus       175 ~Dl  177 (177)
                      |||
T Consensus       176 rDl  178 (364)
T 3op5_A          176 GDI  178 (364)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            997

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.90  E-value=8e-23  Score=159.50  Aligned_cols=124  Identities=26%  Similarity=0.434  Sum_probs=108.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||.|+||.||+|.+.  ++.||||.+....   ....+.+|+.+++.                     
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~---~~~~~~~E~~~l~~---------------------  242 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA---TAQAFLAEASVMTQ---------------------  242 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT---TSHHHHHHHHHHHT---------------------
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch---HHHHHHHHHHHHHh---------------------
Confidence            345578999999999999999999875  6799999986432   44678899999998                     


Q ss_pred             cccCCCCCceeeEEEEecCC-eEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKH-KVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.... .+|+||||+++++|.+++...+.  ++...+..++.||+.||+|||++||+||||
T Consensus       243 ---l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDl  315 (450)
T 1k9a_A          243 ---LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL  315 (450)
T ss_dssp             ---CCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---ccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence               89999999999876554 79999999999999999987653  789999999999999999999999999997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.90  E-value=7.5e-24  Score=161.77  Aligned_cols=130  Identities=13%  Similarity=0.092  Sum_probs=104.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||||++.......  ....+.+|+.++..+++                 
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----------------  132 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG-----------------  132 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT-----------------
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc-----------------
Confidence            34578999999999999999999999999999999997543222  22556788866555433                 


Q ss_pred             ccccCCCCCceeeE-------EEEecCC-----------------eEEEEEeccCCcchhHHHHhcCCCCH-------HH
Q psy13106        104 DKERLTHPNIVQLI-------ETFEDKH-----------------KVYLVMELVTGGELFDRIVEKGSYTE-------KD  152 (177)
Q Consensus       104 ~~~~~~h~~i~~~~-------~~~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~~~~-------~~  152 (177)
                          ++||||++++       +++.+++                 ..|++|||+ +|+|.+++...+.+++       ..
T Consensus       133 ----l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~  207 (377)
T 3byv_A          133 ----IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHA  207 (377)
T ss_dssp             ----CCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHH
T ss_pred             ----cCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHH
Confidence                7899999988       6666553                 389999999 6799999987655555       77


Q ss_pred             HHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        153 ASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       153 ~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +..++.||+.||+|||++||+||||
T Consensus       208 ~~~i~~qi~~aL~~LH~~~ivHrDi  232 (377)
T 3byv_A          208 RLQLTLQVIRLLASLHHYGLVHTYL  232 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCC
Confidence            7889999999999999999999997

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.90  E-value=4.9e-23  Score=153.29  Aligned_cols=128  Identities=27%  Similarity=0.412  Sum_probs=105.1

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+..+.++|.+.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.                   
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~-------------------   64 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRR-------------------   64 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHT-------------------
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHh-------------------
Confidence            45677889999999999999999999999999999999986442 1223567788888888                   


Q ss_pred             cccccCCCCCceeeEEEEe--------------cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106        103 KDKERLTHPNIVQLIETFE--------------DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~--------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                           ++||||+++++++.              +...++++||++. ++|.+++.. +++++..++.++.||+.||+|||
T Consensus        65 -----l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH  137 (320)
T 2i6l_A           65 -----LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIH  137 (320)
T ss_dssp             -----CCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHH
Confidence                 89999999999873              3467999999996 699998864 56999999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       138 ~~~i~H~dl  146 (320)
T 2i6l_A          138 SANVLHRDL  146 (320)
T ss_dssp             HTTCBCCCC
T ss_pred             hCCEecCCC
Confidence            999999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=6.8e-23  Score=153.51  Aligned_cols=127  Identities=21%  Similarity=0.337  Sum_probs=109.4

Q ss_pred             ccccceEEEeeecccceeEEEEEE----EecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAE----SRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ...++|++.+.||.|+||.||+|.    ...+++.||||.+.... ......+.+|+.++..                  
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~------------------   80 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKA------------------   80 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHT------------------
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHh------------------
Confidence            334689999999999999999999    45678999999986442 1223557889999988                  


Q ss_pred             ccccccCCCCCceeeEEEEe--cCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFE--DKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++|+||+++++++.  +.+.++++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||
T Consensus        81 ------l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Di  153 (327)
T 3lxl_A           81 ------LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL  153 (327)
T ss_dssp             ------CCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ------cCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence                  89999999999886  456799999999999999999763 45999999999999999999999999999997

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.90  E-value=2.9e-23  Score=156.74  Aligned_cols=139  Identities=19%  Similarity=0.298  Sum_probs=101.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEec---CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .+...++|.+.+.||.|+||.||+|.+..   ++..+|+|.+....     .....|..++......         ....
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~~~~~~~~---------~~~~   97 (345)
T 2v62_A           32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-----GPLFSELKFYQRVAKK---------DCIK   97 (345)
T ss_dssp             ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC------CHHHHHHHHHHHHCCH---------HHHH
T ss_pred             ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-----cchHHHHHHHHHHhhh---------HHHH
Confidence            33445689999999999999999999987   78899999986432     1223333333332110         0001


Q ss_pred             cccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        101 NDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                      ++...+.++||||+++++++..    ...+|++||++ +++|.+++...+.+++..+..++.||+.||+|||++||+|||
T Consensus        98 e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  176 (345)
T 2v62_A           98 KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGD  176 (345)
T ss_dssp             HHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            1222223899999999999987    78899999999 999999998777899999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       177 l  177 (345)
T 2v62_A          177 I  177 (345)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.90  E-value=7.9e-23  Score=154.43  Aligned_cols=128  Identities=26%  Similarity=0.379  Sum_probs=109.8

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.++|.+.+.||.|+||.||+|.+..+++.||||.+...........+.+|+.++..                    
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~--------------------   65 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH--------------------   65 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHH--------------------
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHh--------------------
Confidence            345677999999999999999999999999999999998643322233456788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++...     ...+++||++. ++|.+++.. ..+++..+..++.|++.||.|||++||+||||
T Consensus        66 ----l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dl  138 (353)
T 2b9h_A           66 ----FKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL  138 (353)
T ss_dssp             ----CCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----CcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence                8999999999987653     67999999996 699998876 45999999999999999999999999999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.90  E-value=4.2e-23  Score=157.96  Aligned_cols=146  Identities=23%  Similarity=0.373  Sum_probs=115.4

Q ss_pred             hccCCCCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccc
Q psy13106         13 LKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL   92 (177)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (177)
                      ..+.+......++.+.++|.+.+.||.|+||.||+|.+..+++.||||++....  .....+.+|+.++..+.....   
T Consensus        21 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~---   95 (397)
T 1wak_A           21 YCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDP---   95 (397)
T ss_dssp             -CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCT---
T ss_pred             CCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCC---
Confidence            334445556677788899999999999999999999999999999999986432  233567788888888543110   


Q ss_pred             cccccCCCcccccccCCCCCceeeEEEEe----cCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q psy13106         93 DETNDNNSNDKDKERLTHPNIVQLIETFE----DKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus        93 ~~~~~~~~~~~~~~~~~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~  166 (177)
                                   ...+|+||+++++.+.    ....+|+|||++ ++++.+.+...  ..+++..++.++.||+.||.|
T Consensus        96 -------------~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  161 (397)
T 1wak_A           96 -------------NDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY  161 (397)
T ss_dssp             -------------TCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence                         0024889999999987    556899999999 56777766544  459999999999999999999


Q ss_pred             HHhC-CccccCC
Q psy13106        167 MHEA-RYLSKPR  177 (177)
Q Consensus       167 LH~~-giiH~Dl  177 (177)
                      ||++ ||+||||
T Consensus       162 lH~~~givHrDi  173 (397)
T 1wak_A          162 LHTKCRIIHTDI  173 (397)
T ss_dssp             HHHTTCEECCCC
T ss_pred             HHHhCCEecCCC
Confidence            9998 9999997

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.90  E-value=7e-25  Score=164.97  Aligned_cols=134  Identities=18%  Similarity=0.223  Sum_probs=102.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-------ccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-------GKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ...++|.+.+.||+|+||.||+|.+  +++.||||++......       .....+.+|+.+++.+......        
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~--------   86 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGE--------   86 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGC--------
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhcc--------
Confidence            4457899999999999999999988  5799999999765321       1125678899988885421100        


Q ss_pred             CCcccccccCCCCCceeeEEE-----------------Eec-------------CCeEEEEEeccCCcchhHHHHhcCCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIET-----------------FED-------------KHKVYLVMELVTGGELFDRIVEKGSY  148 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~-----------------~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~  148 (177)
                             ...+|+||+++.+.                 +.+             ...+|+|||||++|++.+.+.. ..+
T Consensus        87 -------~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~  158 (336)
T 2vuw_A           87 -------VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLS  158 (336)
T ss_dssp             -------SSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCC
T ss_pred             -------ccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCC
Confidence                   00135555555544                 433             6889999999999987776644 458


Q ss_pred             CHHHHHHHHHHHHHHHHHHH-hCCccccCC
Q psy13106        149 TEKDASMLIRQVLEAVDYMH-EARYLSKPR  177 (177)
Q Consensus       149 ~~~~~~~~~~qi~~~l~~LH-~~giiH~Dl  177 (177)
                      ++..++.++.||+.||+||| ++||+||||
T Consensus       159 ~~~~~~~i~~qi~~aL~~lH~~~~ivHrDl  188 (336)
T 2vuw_A          159 SLATAKSILHQLTASLAVAEASLRFEHRDL  188 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCBCSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCEeECCC
Confidence            99999999999999999999 999999997

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.90  E-value=7.2e-24  Score=158.63  Aligned_cols=132  Identities=17%  Similarity=0.288  Sum_probs=111.4

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ........++|.+.+.||.|+||.||+|... +++.||||.+...........+.+|+.++..                 
T Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-----------------   83 (326)
T 3uim_A           22 LRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISM-----------------   83 (326)
T ss_dssp             THHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGT-----------------
T ss_pred             HHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHh-----------------
Confidence            3444556778999999999999999999754 6889999998765443344567788888877                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----SYTEKDASMLIRQVLEAVDYMHEA---RYL  173 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---gii  173 (177)
                             +.||||+++++++.+.+..+++|||+++++|.+++....    .+++..+..++.|++.||+|||++   ||+
T Consensus        84 -------l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv  156 (326)
T 3uim_A           84 -------AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII  156 (326)
T ss_dssp             -------CCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEE
T ss_pred             -------ccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence                   889999999999999999999999999999999997543    389999999999999999999999   999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       157 H~Dl  160 (326)
T 3uim_A          157 HRDV  160 (326)
T ss_dssp             CCCC
T ss_pred             eCCC
Confidence            9997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.90  E-value=3.6e-23  Score=162.02  Aligned_cols=125  Identities=23%  Similarity=0.340  Sum_probs=106.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+++.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                     
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------  117 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC---------------------  117 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHH---------------------
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHh---------------------
Confidence            34578999999999999999999999999999999997543222 23567789999988                     


Q ss_pred             cccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++...      ..+|+||||+++ ++.+.+..  .+++..++.++.||+.||+|||++||+||||
T Consensus       118 ---l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDl  190 (464)
T 3ttj_A          118 ---VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  190 (464)
T ss_dssp             ---CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ---CCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence               8999999999999654      457999999965 67776643  3899999999999999999999999999997

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.90  E-value=1.1e-22  Score=153.17  Aligned_cols=127  Identities=28%  Similarity=0.513  Sum_probs=104.8

Q ss_pred             cccCcccccceEEEe-eecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHH-HHhhcccccccccccccC
Q psy13106         21 EIKGPSIEEKYILKE-LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV-LRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~-~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~   98 (177)
                      ......+.++|.+.+ .||.|+||.||+|.+..+++.||||++...      .....|+.. +..               
T Consensus        20 ~~~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~e~~~~~~~---------------   78 (336)
T 3fhr_A           20 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------PKARQEVDHHWQA---------------   78 (336)
T ss_dssp             CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS------HHHHHHHHHHHHH---------------
T ss_pred             CCCCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------HHHHHHHHHHHHh---------------
Confidence            445556778999965 699999999999999999999999998532      122233332 333               


Q ss_pred             CCcccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                               ++||||+++++++..    ...++++|||+++++|.+++....  .+++..++.++.||+.||.|||++||
T Consensus        79 ---------~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i  149 (336)
T 3fhr_A           79 ---------SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI  149 (336)
T ss_dssp             ---------TTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ---------cCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                     689999999999875    456899999999999999998654  59999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       150 vH~dl  154 (336)
T 3fhr_A          150 AHRDV  154 (336)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99997

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.90  E-value=9.6e-23  Score=149.97  Aligned_cols=128  Identities=17%  Similarity=0.224  Sum_probs=103.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHH-HHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK-VLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +...++|.+.+.||.|+||.||+|.+..+++.||+|.+..............|.. .++.                    
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~--------------------   62 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT--------------------   62 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTT--------------------
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHh--------------------
Confidence            3456789999999999999999999999999999999865432222222222322 2333                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                          ++||||+++++++.+.+..+++||+++ ++|.+++..    ...+++..++.++.|++.||.|||++ ||+||||
T Consensus        63 ----~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl  136 (290)
T 3fme_A           63 ----VDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV  136 (290)
T ss_dssp             ----CCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCC
T ss_pred             ----CCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence                789999999999999999999999996 488776653    45699999999999999999999998 9999997

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.90  E-value=1.2e-22  Score=157.70  Aligned_cols=136  Identities=16%  Similarity=0.348  Sum_probs=114.5

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ..+.+.+..+|.+.+.||.|+||.||+|.+..+++.||||++....  .....+..|+.++..+....            
T Consensus        89 ~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~------------  154 (429)
T 3kvw_A           89 QVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQD------------  154 (429)
T ss_dssp             CCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTC------------
T ss_pred             ccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhcc------------
Confidence            3456677789999999999999999999999999999999986432  22345667888887754311            


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ..+|+||+.+++.+...+.++++||++. ++|.+++....  .+++..++.++.||+.||+|||++||+||||
T Consensus       155 ------~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  226 (429)
T 3kvw_A          155 ------KDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDL  226 (429)
T ss_dssp             ------TTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCC
T ss_pred             ------ccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence                  1479999999999999999999999995 69999887654  4899999999999999999999999999997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=4.2e-23  Score=155.90  Aligned_cols=128  Identities=25%  Similarity=0.418  Sum_probs=103.8

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc----cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG----KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ....++|.+.+.||.|+||.||+|.+..+++.||+|.+.......    ....+.+|+.++..                 
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~-----------------   68 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE-----------------   68 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH-----------------
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhh-----------------
Confidence            345678999999999999999999999999999999986533211    12467789999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+....+++||++++ +|.+++.... .+++..+..++.|++.||.|||++||+||||
T Consensus        69 -------l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  138 (346)
T 1ua2_A           69 -------LSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL  138 (346)
T ss_dssp             -------CCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             -------CCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCC
Confidence                   8999999999999999999999999975 8888887543 5899999999999999999999999999997

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.90  E-value=6.1e-23  Score=151.33  Aligned_cols=132  Identities=20%  Similarity=0.320  Sum_probs=106.4

Q ss_pred             CCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccc
Q psy13106         18 KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        18 ~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      ......++...++|++.+.||+|+||.||+|.+.   ..+|+|++....... ....+.+|+.+++.             
T Consensus        13 ~~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-------------   76 (289)
T 3og7_A           13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-------------   76 (289)
T ss_dssp             -----CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTT-------------
T ss_pred             CCCCCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHh-------------
Confidence            3445566777889999999999999999999764   359999986543221 22557788888888             


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                                 ++|+||++++++. .....+++||++++++|.+++... ..+++..+..++.|++.||.|||++||+||
T Consensus        77 -----------l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~  144 (289)
T 3og7_A           77 -----------TRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR  144 (289)
T ss_dssp             -----------CCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             -----------CCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence                       8999999999965 566789999999999999988643 459999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       145 Dl  146 (289)
T 3og7_A          145 DL  146 (289)
T ss_dssp             CC
T ss_pred             cC
Confidence            97

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.90  E-value=7.2e-23  Score=153.41  Aligned_cols=136  Identities=24%  Similarity=0.395  Sum_probs=113.8

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEE-ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAES-RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      ...++.+.++|.+.+.||.|+||.||+|.+ ..+++.||+|++....  .....+.+|+.++..+...-           
T Consensus         6 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~-----------   72 (339)
T 1z57_A            6 CQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTD-----------   72 (339)
T ss_dssp             CSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHC-----------
T ss_pred             eecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcC-----------
Confidence            456778889999999999999999999998 5678999999985432  22356778888888743210           


Q ss_pred             CcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        100 SNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ...|++++++++++...+.++++||++ +++|.+++...+  ++++..+..++.||+.||+|||++||+||||
T Consensus        73 -------~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  144 (339)
T 1z57_A           73 -------PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDL  144 (339)
T ss_dssp             -------TTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -------CCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence                   135667999999999999999999999 889999998765  5889999999999999999999999999997

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.90  E-value=1.1e-22  Score=152.60  Aligned_cols=127  Identities=19%  Similarity=0.284  Sum_probs=107.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEE----EEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMF----AVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.+    ++|.+...........+.+|+.++..                  
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~------------------   73 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS------------------   73 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTT------------------
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHh------------------
Confidence            44568999999999999999999998887765    55555433322334667889998888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++..+. .+++++++.+++|.+++... ..+++..+..++.||+.||.|||++||+||||
T Consensus        74 ------l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  143 (327)
T 3lzb_A           74 ------VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL  143 (327)
T ss_dssp             ------CCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ------CCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCC
Confidence                  89999999999998654 78889999999999998764 46999999999999999999999999999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=1.7e-22  Score=148.29  Aligned_cols=129  Identities=24%  Similarity=0.344  Sum_probs=108.9

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .....++|.+.+.||.|+||.||+|.+...   +..+|+|.+...........+.+|+.++..                 
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-----------------   69 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN-----------------   69 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHH-----------------
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHh-----------------
Confidence            345567899999999999999999997643   346999998654333334667889999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||+++++++.+ +..+++||++++++|.+++.... .+++..+..++.|++.||.|||++||+||||
T Consensus        70 -------l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  139 (281)
T 3cc6_A           70 -------LDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI  139 (281)
T ss_dssp             -------HCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             -------CCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence                   789999999999865 45689999999999999997654 5999999999999999999999999999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=8.4e-23  Score=150.97  Aligned_cols=129  Identities=19%  Similarity=0.275  Sum_probs=106.2

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +....+|.+.+.||+|+||.||+|.+..+   ...+++|.+...........+.+|+.+++.                  
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~------------------   82 (298)
T 3f66_A           21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD------------------   82 (298)
T ss_dssp             CGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHT------------------
T ss_pred             CccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHh------------------
Confidence            33455799999999999999999997543   345899987643322233567788888888                  


Q ss_pred             ccccccCCCCCceeeEEEE-ecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETF-EDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++ ..++..+++||++++++|.+++... ..++...+..++.|++.||.|||++||+||||
T Consensus        83 ------l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~di  154 (298)
T 3f66_A           83 ------FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDL  154 (298)
T ss_dssp             ------CCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ------CCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence                  8999999999985 4567889999999999999999753 45889999999999999999999999999997

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.90  E-value=1.5e-22  Score=158.08  Aligned_cols=127  Identities=22%  Similarity=0.350  Sum_probs=109.5

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ......++|.+.+.||.|+||.||+|.+. .+..||||.+....  .....+.+|+.+++.                   
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~-------------------  239 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--MSVEAFLAEANVMKT-------------------  239 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS--BCHHHHHHHHHHHTT-------------------
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC--ccHHHHHHHHHHHhh-------------------
Confidence            34556678999999999999999999886 46789999986533  234678889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++. ...+++||||+++|+|.+++...  ..++...+..++.||+.||+|||++||+||||
T Consensus       240 -----l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDl  310 (454)
T 1qcf_A          240 -----LQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL  310 (454)
T ss_dssp             -----CCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             -----CCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence                 89999999999886 56789999999999999999754  35889999999999999999999999999997

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=6.5e-23  Score=153.48  Aligned_cols=124  Identities=20%  Similarity=0.211  Sum_probs=103.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|++.+.||+|+||.||+|.+.  ++.||||++.....  .......|+.++..                     
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~--~~~~~~~E~~~l~~---------------------   74 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK--QSWQNEYEVYSLPG---------------------   74 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH--HHHHHHHHHHTSTT---------------------
T ss_pred             ccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch--HHHHHHHHHHHHhc---------------------
Confidence            344568999999999999999999875  78999999854321  22334456665655                     


Q ss_pred             cccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC----------
Q psy13106        105 KERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA----------  170 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~----------  170 (177)
                         ++||||+++++++....    .++++|||+++++|.+++... .+++..+..++.|++.||.|||+.          
T Consensus        75 ---l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~  150 (322)
T 3soc_A           75 ---MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP  150 (322)
T ss_dssp             ---CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEEC
T ss_pred             ---CCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCC
Confidence               89999999999998643    479999999999999999765 499999999999999999999999          


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       151 ~ivH~Dl  157 (322)
T 3soc_A          151 AISHRDI  157 (322)
T ss_dssp             EEECSCC
T ss_pred             CEEeCCC
Confidence            9999997

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.2e-22  Score=149.95  Aligned_cols=126  Identities=20%  Similarity=0.294  Sum_probs=106.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .-.|.+.+.||.|+||.||+|.+..++.   .+|+|.+...........+.+|+.+++.                     
T Consensus        20 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~---------------------   78 (298)
T 3pls_A           20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG---------------------   78 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHT---------------------
T ss_pred             ceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHh---------------------
Confidence            3367888999999999999999865554   7999998643322233567788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeE-EEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKV-YLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+.+.. +++||++.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||
T Consensus        79 ---l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~di  150 (298)
T 3pls_A           79 ---LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDL  150 (298)
T ss_dssp             ---CCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence               8999999999999866554 999999999999999976 345889999999999999999999999999997

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=2e-22  Score=148.34  Aligned_cols=126  Identities=25%  Similarity=0.450  Sum_probs=106.9

Q ss_pred             cccceEEEe-eecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         27 IEEKYILKE-LLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        27 ~~~~y~~~~-~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..++|.+.+ .||.|+||.||+|.+.  .++..+|+|.+...........+.+|+.++..                    
T Consensus         7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--------------------   66 (287)
T 1u59_A            7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ--------------------   66 (287)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHH--------------------
T ss_pred             cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHh--------------------
Confidence            345777776 9999999999999864  46778999998754333334667889999988                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++ ..+.++++||++++++|.+++... ..+++..+..++.|++.||.|||++||+||||
T Consensus        67 ----l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  136 (287)
T 1u59_A           67 ----LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL  136 (287)
T ss_dssp             ----CCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ----CCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCC
Confidence                8999999999999 456789999999999999998644 45999999999999999999999999999997

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.89  E-value=1.7e-22  Score=147.41  Aligned_cols=124  Identities=23%  Similarity=0.316  Sum_probs=103.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc---cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG---KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..++|.+.+.||.|+||.||+|.+.  ++.+|+|++.......   ....+.+|+.++..                    
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--------------------   62 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAM--------------------   62 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHH--------------------
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHh--------------------
Confidence            3568999999999999999999975  7899999986543222   22567788888888                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR---YLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g---iiH~Dl  177 (177)
                          ++||||+++++++.+.+..+++|||+++++|.+++.. ..+++..+..++.|++.||.|||++|   |+||||
T Consensus        63 ----l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~di  134 (271)
T 3dtc_A           63 ----LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL  134 (271)
T ss_dssp             ----CCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCC
T ss_pred             ----cCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCC
Confidence                8999999999999999999999999999999998854 46999999999999999999999999   999997

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.89  E-value=2e-22  Score=153.59  Aligned_cols=125  Identities=22%  Similarity=0.324  Sum_probs=107.0

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                     
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   80 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC---------------------   80 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHH---------------------
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHh---------------------
Confidence            34678999999999999999999999999999999986543221 22456788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++....      .+|+|||+++ ++|.+.+.  ..+++..+..++.||+.||.|||++||+||||
T Consensus        81 ---l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dl  153 (371)
T 2xrw_A           81 ---VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  153 (371)
T ss_dssp             ---CCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---cCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence               89999999999997654      7899999996 58888875  34899999999999999999999999999997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=154.11  Aligned_cols=119  Identities=18%  Similarity=0.252  Sum_probs=102.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEec--------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCC
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRE--------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNN   99 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~--------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   99 (177)
                      .++|.+.+.||.|+||.||+|.+..        .++.||+|.+...      ..+.+|+.++..                
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~----------------   98 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQR----------------   98 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHH----------------
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHH----------------
Confidence            5799999999999999999999987        4789999998533      457788988888                


Q ss_pred             CcccccccCCCCCcee---------------eEEEEec-CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHH
Q psy13106        100 SNDKDKERLTHPNIVQ---------------LIETFED-KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVL  161 (177)
Q Consensus       100 ~~~~~~~~~~h~~i~~---------------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~  161 (177)
                              +.||||++               +++++.. +..+|++|||+ +++|.+++...  ..+++..+..++.||+
T Consensus        99 --------l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~  169 (352)
T 2jii_A           99 --------AAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLL  169 (352)
T ss_dssp             --------HCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred             --------hcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHH
Confidence                    56776665               6777765 78899999999 99999999875  6799999999999999


Q ss_pred             HHHHHHHhCCccccCC
Q psy13106        162 EAVDYMHEARYLSKPR  177 (177)
Q Consensus       162 ~~l~~LH~~giiH~Dl  177 (177)
                      .||.|||++||+||||
T Consensus       170 ~~L~~LH~~~ivH~Di  185 (352)
T 2jii_A          170 DALEFLHENEYVHGNV  185 (352)
T ss_dssp             HHHHHHHHTTCBCSCC
T ss_pred             HHHHHHHhCCccCCCC
Confidence            9999999999999997

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.89  E-value=1.8e-22  Score=147.92  Aligned_cols=127  Identities=23%  Similarity=0.365  Sum_probs=109.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ......++|.+.+.||.|+||.||+|.+. ++..+|+|.+....  .....+.+|+.++..                   
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~-------------------   64 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS--MSPDAFLAEANLMKQ-------------------   64 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS--SCHHHHHHHHHHHHH-------------------
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc--ccHHHHHHHHHHHHh-------------------
Confidence            34566789999999999999999999875 56789999986433  234567889999998                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++. .+..+++||++++++|.+++....  .+++..+..++.|++.||.|||++||+||||
T Consensus        65 -----l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di  135 (279)
T 1qpc_A           65 -----LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL  135 (279)
T ss_dssp             -----CCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -----CCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence                 89999999999886 456899999999999999987543  5999999999999999999999999999997

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.89  E-value=1.6e-22  Score=151.56  Aligned_cols=130  Identities=22%  Similarity=0.356  Sum_probs=109.0

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEE----ecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAES----RENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +.....++|.+.+.||.|+||.||+|.+    ..+++.||+|.+.... ......+.+|+.+++.               
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~---------------   98 (326)
T 2w1i_A           35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKS---------------   98 (326)
T ss_dssp             --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHT---------------
T ss_pred             ccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHh---------------
Confidence            3445567899999999999999999984    5678999999986432 2223567889999888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecC--CeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDK--HKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                               ++||||+++++++...  ..++++||++++++|.+++... ..+++..+..++.||+.||.|||++||+||
T Consensus        99 ---------l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  169 (326)
T 2w1i_A           99 ---------LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR  169 (326)
T ss_dssp             ---------CCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             ---------CCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence                     8899999999988654  4789999999999999999865 359999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       170 di  171 (326)
T 2w1i_A          170 DL  171 (326)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.89  E-value=8.4e-23  Score=151.36  Aligned_cols=126  Identities=31%  Similarity=0.555  Sum_probs=104.8

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +.++|.+.+.||.|+||.||++.+..+++.+|+|++......   .....+.+|+.++..                    
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~--------------------   62 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR--------------------   62 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTT--------------------
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHh--------------------
Confidence            457899999999999999999999999999999999765322   123567788888888                    


Q ss_pred             ccccCCCCCceeeEEEE--ecCCeEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETF--EDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++++  .+....+++||+++++ |.+++..  ...+++..+..++.||+.||.|||++||+||||
T Consensus        63 ----l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl  135 (305)
T 2wtk_C           63 ----LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDI  135 (305)
T ss_dssp             ----CCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----cCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence                8999999999998  4556899999999765 7777654  345999999999999999999999999999997

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.89  E-value=2.6e-23  Score=158.42  Aligned_cols=127  Identities=25%  Similarity=0.434  Sum_probs=101.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||.+...... .....+.+|+.+++.                    
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~--------------------   84 (367)
T 2fst_X           25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH--------------------   84 (367)
T ss_dssp             EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHH--------------------
T ss_pred             cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHh--------------------
Confidence            34567999999999999999999999999999999998643211 122456789999988                    


Q ss_pred             ccccCCCCCceeeEEEEecC------CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDK------HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++...      ..+|++|+++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||
T Consensus        85 ----l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dl  158 (367)
T 2fst_X           85 ----MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDL  158 (367)
T ss_dssp             ----CCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ----CCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence                8999999999998654      5689999999 7899998865 46999999999999999999999999999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.89  E-value=1.9e-22  Score=148.70  Aligned_cols=123  Identities=25%  Similarity=0.397  Sum_probs=105.7

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.....||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.++..                        ++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~------------------------l~   77 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKH------------------------LK   77 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHT------------------------CC
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHh------------------------CC
Confidence            3444458999999999999999999999999986543 2234567788888888                        89


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||||+++++++.+.+..+++||++++++|.+++....   .+++..+..++.||+.||.|||++||+|+||
T Consensus        78 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  148 (295)
T 2clq_A           78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI  148 (295)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             CCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCC
Confidence            9999999999999999999999999999999987652   4678899999999999999999999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.89  E-value=2.2e-22  Score=149.79  Aligned_cols=132  Identities=15%  Similarity=0.281  Sum_probs=105.0

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEec---CCcEEEEEEEecccccc-cchhHHHHHHHHHhhccccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .......++|.+.+.||.|+||.||+|.+..   ++..+|+|.+....... ....+.+|+.++..              
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--------------   92 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD--------------   92 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHT--------------
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhc--------------
Confidence            3344455689999999999999999998875   45589999986543221 22457788888888              


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHh------cCCCCHHHHHHHHHHHHHHHHH
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVE------KGSYTEKDASMLIRQVLEAVDY  166 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~  166 (177)
                                ++||||+++++++.+..     ..+++||++++++|.+++..      ...+++..++.++.||+.||.|
T Consensus        93 ----------l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  162 (313)
T 3brb_A           93 ----------FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY  162 (313)
T ss_dssp             ----------CCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHH
Confidence                      89999999999987654     45999999999999998842      3458999999999999999999


Q ss_pred             HHhCCccccCC
Q psy13106        167 MHEARYLSKPR  177 (177)
Q Consensus       167 LH~~giiH~Dl  177 (177)
                      ||++||+||||
T Consensus       163 LH~~~ivH~di  173 (313)
T 3brb_A          163 LSNRNFLHRDL  173 (313)
T ss_dssp             HHTTTCCCCCC
T ss_pred             HHhCCcccCCC
Confidence            99999999997

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.89  E-value=2.6e-22  Score=148.36  Aligned_cols=125  Identities=19%  Similarity=0.294  Sum_probs=103.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+.++|.+.+.||+|+||.||+|.+  +++.||||++....    ......|.+++....                  
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~------------------   58 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD----EKSWFRETELYNTVM------------------   58 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHHHTC------------------
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc----chhhHHHHHHHHHhh------------------
Confidence            356778999999999999999999987  58899999985432    234455666665532                  


Q ss_pred             ccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------hCC
Q psy13106        104 DKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH--------EAR  171 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH--------~~g  171 (177)
                          ++||||+++++++..    ...++++|||+++++|.+++.. ..+++..+..++.||+.||+|||        +.|
T Consensus        59 ----l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~  133 (301)
T 3q4u_A           59 ----LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA  133 (301)
T ss_dssp             ----CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE
T ss_pred             ----ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Confidence                689999999998643    3568999999999999999954 45999999999999999999999        999


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+||||
T Consensus       134 ivH~Dl  139 (301)
T 3q4u_A          134 IAHRDL  139 (301)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=2.7e-22  Score=150.46  Aligned_cols=131  Identities=19%  Similarity=0.284  Sum_probs=108.6

Q ss_pred             CCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         18 KDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        18 ~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .........+.++|.+.+.||.|+||.||+|.+.  ++.||||++....    ......|.+++....            
T Consensus        26 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~e~~~~~~~~------------   87 (337)
T 3mdy_A           26 GLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE----EASWFRETEIYQTVL------------   87 (337)
T ss_dssp             SSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG----HHHHHHHHHHHTSTT------------
T ss_pred             CCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc----cchhhhHHHHHHHHh------------
Confidence            3344566777889999999999999999999875  8899999985332    233445555554421            


Q ss_pred             CCCcccccccCCCCCceeeEEEEecC----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDK----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA---  170 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---  170 (177)
                                ++||||+++++++...    ..++++|||+++++|.+++... .+++..+..++.|++.||.|||++   
T Consensus        88 ----------~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~  156 (337)
T 3mdy_A           88 ----------MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFS  156 (337)
T ss_dssp             ----------CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCS
T ss_pred             ----------hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence                      5899999999999876    7899999999999999999665 599999999999999999999999   


Q ss_pred             -----CccccCC
Q psy13106        171 -----RYLSKPR  177 (177)
Q Consensus       171 -----giiH~Dl  177 (177)
                           ||+||||
T Consensus       157 ~~~~~~ivH~Di  168 (337)
T 3mdy_A          157 TQGKPAIAHRDL  168 (337)
T ss_dssp             TTCBCCEECSCC
T ss_pred             hccCCCEEeccc
Confidence                 9999997

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.89  E-value=5.9e-23  Score=153.49  Aligned_cols=128  Identities=20%  Similarity=0.311  Sum_probs=109.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|.+.+.||.|+||.||+|.+. +++.+|+|.+.... ......+.+|+.++..                    
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~--------------------   91 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES-SQGIEEFETEIETLSF--------------------   91 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC-SSHHHHHHHHHHGGGS--------------------
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC-hHHHHHHHHHHHHHHh--------------------
Confidence            3445678999999999999999999964 68899999875432 1223556778877777                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+..+++|||+++++|.+++....    .+++..+..++.|++.||.|||++||+||||
T Consensus        92 ----l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dl  165 (321)
T 2qkw_B           92 ----CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV  165 (321)
T ss_dssp             ----CCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ----CCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCC
Confidence                899999999999999999999999999999999886543    4889999999999999999999999999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=2.1e-22  Score=157.26  Aligned_cols=126  Identities=21%  Similarity=0.342  Sum_probs=109.0

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|.+.+.||+|+||.||+|.+.. +..||||.+....  .....+.+|+.+++.                    
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~--------------------  235 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT--MSPEAFLQEAQVMKK--------------------  235 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS--SCHHHHHHHHHHHHH--------------------
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC--CCHHHHHHHHHHHHh--------------------
Confidence            44556789999999999999999999875 4679999986433  233568899999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+ +.+++||||+++++|.+++...  ..+++..+..++.||+.||+|||++||+||||
T Consensus       236 ----l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDl  306 (452)
T 1fmk_A          236 ----LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  306 (452)
T ss_dssp             ----CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ----CCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence                899999999999865 6789999999999999999743  45899999999999999999999999999997

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=2.2e-22  Score=160.04  Aligned_cols=126  Identities=21%  Similarity=0.342  Sum_probs=109.2

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|.+.+.||.|+||.||+|.+.. +..||||.+....  .....+.+|+.+++.                    
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~--------------------  318 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT--MSPEAFLQEAQVMKK--------------------  318 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS--SCHHHHHHHHHHHHH--------------------
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC--CCHHHHHHHHHHHHh--------------------
Confidence            44556789999999999999999999875 4679999986543  233568899999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++|+||+++++++.+ ..+|+||||+.+++|.+++...  ..+++..+..++.||+.||+|||++||+||||
T Consensus       319 ----l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  389 (535)
T 2h8h_A          319 ----LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  389 (535)
T ss_dssp             ----CCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ----CCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence                899999999999865 6789999999999999999743  45899999999999999999999999999997

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.89  E-value=1.8e-22  Score=151.10  Aligned_cols=133  Identities=18%  Similarity=0.219  Sum_probs=108.2

Q ss_pred             CcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHH-HHHhhcccccccccccccC
Q psy13106         20 NEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK-VLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        20 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~   98 (177)
                      .........++|.+.+.||.|+||.||+|.+..+++.||||.+..............|.. +++.               
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~---------------   77 (327)
T 3aln_A           13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS---------------   77 (327)
T ss_dssp             CCEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSS---------------
T ss_pred             hHHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHc---------------
Confidence            344556667899999999999999999999999999999999965432222233444444 3333               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-Cc
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-----KGSYTEKDASMLIRQVLEAVDYMHEA-RY  172 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~-gi  172 (177)
                               ++||||+++++++.+.+..+++||++.+ +|.+++..     ...+++..+..++.|++.||.|||+. ||
T Consensus        78 ---------~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~i  147 (327)
T 3aln_A           78 ---------SDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKI  147 (327)
T ss_dssp             ---------CCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ---------CCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCE
Confidence                     7899999999999999999999999965 88777653     45689999999999999999999999 99


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       148 vH~dl  152 (327)
T 3aln_A          148 IHRDI  152 (327)
T ss_dssp             CCSCC
T ss_pred             eECCC
Confidence            99997

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.89  E-value=2e-22  Score=147.70  Aligned_cols=124  Identities=27%  Similarity=0.434  Sum_probs=105.1

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||.|+||.||++.+.  ++.+|+|.+....   ....+.+|+.++..                     
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~~E~~~l~~---------------------   70 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA---TAQAFLAEASVMTQ---------------------   70 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC-----HHHHHTHHHHTT---------------------
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh---HHHHHHHHHHHHHh---------------------
Confidence            345678999999999999999999874  7899999985432   34567788888888                     


Q ss_pred             cccCCCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEKGS--YTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+ .+.++++||++++++|.+++.....  +++..+..++.|++.||.|||++||+||||
T Consensus        71 ---l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  143 (278)
T 1byg_A           71 ---LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL  143 (278)
T ss_dssp             ---CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence               899999999998754 4579999999999999999976543  889999999999999999999999999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.89  E-value=6.9e-22  Score=147.68  Aligned_cols=130  Identities=23%  Similarity=0.361  Sum_probs=108.2

Q ss_pred             ccccceEEEeeecccceeEEEEEEEe-cCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESR-ENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...++|.+.+.||.|+||.||+|.+. .+++.||+|.+....... ......+|+.+++.+..                 
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~-----------------   70 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET-----------------   70 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH-----------------
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhc-----------------
Confidence            34578999999999999999999995 678899999987544322 23456678888777432                 


Q ss_pred             ccccCCCCCceeeEEEEe-----cCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        104 DKERLTHPNIVQLIETFE-----DKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                          +.||||+++++++.     ....++++||++. ++|.+++....  .+++..+..++.||+.||.|||++||+|||
T Consensus        71 ----~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~d  145 (326)
T 1blx_A           71 ----FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD  145 (326)
T ss_dssp             ----TCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             ----cCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence                58999999999986     4567999999996 59999987653  389999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       146 l  146 (326)
T 1blx_A          146 L  146 (326)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.89  E-value=7e-22  Score=159.43  Aligned_cols=124  Identities=25%  Similarity=0.455  Sum_probs=105.5

Q ss_pred             cceEEEe-eecccceeEEEEEEEec--CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         29 EKYILKE-LLGTGAFSEVRLAESRE--NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        29 ~~y~~~~-~lg~g~~g~v~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.+.+.+ .||.|+||.||+|.+..  ++..||||++...........+.+|+.++..                      
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~----------------------  392 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ----------------------  392 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTT----------------------
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHh----------------------
Confidence            3455555 89999999999998863  4567999998755433344678899999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.. +.+++|||||.+++|.+++... ..+++..+..++.||+.||+|||++||+||||
T Consensus       393 --l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDl  462 (613)
T 2ozo_A          393 --LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNL  462 (613)
T ss_dssp             --CCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --CCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcC
Confidence              899999999999876 5699999999999999998754 45999999999999999999999999999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.89  E-value=3.6e-22  Score=151.41  Aligned_cols=127  Identities=24%  Similarity=0.426  Sum_probs=106.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc----------chhHHHHHHHHHhhcccccccccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK----------EDSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~----------~~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      ..+.++|.+.+.||.|+||.||+|.+.. ++.||||.+........          ...+.+|+.++..           
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-----------   85 (362)
T 3pg1_A           18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH-----------   85 (362)
T ss_dssp             HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHH-----------
T ss_pred             HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHh-----------
Confidence            3556789999999999999999998865 88999999865432211          1557789999988           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEe-----cCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFE-----DKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                                   ++||||+++++++.     ....+|++||++. ++|.+.+... ..+++..+..++.||+.||.|||
T Consensus        86 -------------l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  151 (362)
T 3pg1_A           86 -------------FHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH  151 (362)
T ss_dssp             -------------CCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence                         89999999999984     3347899999996 5888877654 36999999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       152 ~~~ivH~Dl  160 (362)
T 3pg1_A          152 EAGVVHRDL  160 (362)
T ss_dssp             HTTCCCCCC
T ss_pred             HCcCEecCC
Confidence            999999997

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.89  E-value=9.2e-22  Score=145.09  Aligned_cols=124  Identities=21%  Similarity=0.331  Sum_probs=105.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||+|++....   ....+.+|+.++..                      
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~----------------------   60 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKM----------------------   60 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHH----------------------
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHH----------------------
Confidence            45678999999999999999999999999999999986433   33567889999988                      


Q ss_pred             ccCCCCCcee-eEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQ-LIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.|++++. +..++......+++||++ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus        61 --l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dl  131 (296)
T 3uzp_A           61 --MQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDV  131 (296)
T ss_dssp             --HTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             --hhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence              66766554 444446778899999999 8899999873 456999999999999999999999999999997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=4.5e-22  Score=148.12  Aligned_cols=132  Identities=21%  Similarity=0.278  Sum_probs=111.3

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      .......++|.+.+.||.|+||.||++.+. +++.+|+|.+....... ....+.+|+.++..+..              
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~--------------   85 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------------   85 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG--------------
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc--------------
Confidence            334455668999999999999999999885 48899999986543222 23567788888888321              


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                              .|+||+++++++.....++++|| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||
T Consensus        86 --------~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl  153 (313)
T 3cek_A           86 --------HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDL  153 (313)
T ss_dssp             --------GCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             --------cCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence                    26999999999999999999999 558899999998888999999999999999999999999999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.89  E-value=1.1e-21  Score=158.90  Aligned_cols=122  Identities=27%  Similarity=0.397  Sum_probs=104.6

Q ss_pred             eEEE-eeecccceeEEEEEEEe--cCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         31 YILK-ELLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        31 y~~~-~~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.+. +.||.|+||.||+|.+.  .+++.||||++....... ....+.+|+.++..                       
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~-----------------------  426 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-----------------------  426 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHH-----------------------
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHh-----------------------
Confidence            4443 47999999999999664  456889999987543322 23568899999999                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.. +..++||||+++++|.+++.....+++..+..++.||+.||+|||++||+||||
T Consensus       427 -l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDL  495 (635)
T 4fl3_A          427 -LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL  495 (635)
T ss_dssp             -CCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -CCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCC
Confidence             899999999999864 568899999999999999988888999999999999999999999999999997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.88  E-value=6e-22  Score=148.40  Aligned_cols=127  Identities=23%  Similarity=0.363  Sum_probs=106.7

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .....+|++.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.++..                     
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~---------------------   81 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKK---------------------   81 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHH---------------------
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHH---------------------
Confidence            344558999999999999999999999999999999985432 1223567788888887                     


Q ss_pred             cccC-CCCCceeeEEEEe--------cCCeEEEEEeccCCcchhHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-
Q psy13106        105 KERL-THPNIVQLIETFE--------DKHKVYLVMELVTGGELFDRIVE---KGSYTEKDASMLIRQVLEAVDYMHEAR-  171 (177)
Q Consensus       105 ~~~~-~h~~i~~~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~g-  171 (177)
                         + +||||+++++++.        ....++++||++. |+|.+++..   .+.+++..+..++.||+.||.|||++| 
T Consensus        82 ---l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~  157 (337)
T 3ll6_A           82 ---LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP  157 (337)
T ss_dssp             ---HTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             ---hccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence               5 5999999999983        3455899999995 699888764   456999999999999999999999999 


Q ss_pred             -ccccCC
Q psy13106        172 -YLSKPR  177 (177)
Q Consensus       172 -iiH~Dl  177 (177)
                       |+||||
T Consensus       158 ~ivH~Di  164 (337)
T 3ll6_A          158 PIIHRDL  164 (337)
T ss_dssp             CCBCCCC
T ss_pred             CEEEccC
Confidence             999997

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.88  E-value=7.4e-22  Score=145.53  Aligned_cols=124  Identities=22%  Similarity=0.337  Sum_probs=100.8

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||++....   ....+..|+.++..                      
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~----------------------   60 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKM----------------------   60 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHH----------------------
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHH----------------------
Confidence            45678999999999999999999999999999999875433   33457788888888                      


Q ss_pred             ccCCCCCceeeE-EEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLI-ETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~-~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +.|++++..+ .++......+++||++ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus        61 --l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  131 (296)
T 4hgt_A           61 --MQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDV  131 (296)
T ss_dssp             --HTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             --hcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence              5666655554 4556788899999999 8899999874 456999999999999999999999999999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.88  E-value=3e-22  Score=152.65  Aligned_cols=125  Identities=22%  Similarity=0.427  Sum_probs=107.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.+++.                     
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   97 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH---------------------   97 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHH---------------------
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHh---------------------
Confidence            45679999999999999999999999999999999986543221 23566788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCeE------EEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKV------YLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++......      |++||++. ++|.+.+..  .+++..+..++.||+.||.|||++||+||||
T Consensus        98 ---l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  170 (371)
T 4exu_A           98 ---MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDL  170 (371)
T ss_dssp             ---CCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---cCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCc
Confidence               8999999999999876654      99999996 588887633  4999999999999999999999999999997

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.88  E-value=5.9e-23  Score=153.06  Aligned_cols=135  Identities=16%  Similarity=0.263  Sum_probs=110.3

Q ss_pred             CCCCCcccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccc
Q psy13106         16 DGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDE   94 (177)
Q Consensus        16 ~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~   94 (177)
                      .............++|.+.+.||.|+||.||+|.+..   .+++|.+....... ....+.+|+.++..           
T Consensus        20 ~~~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~-----------   85 (319)
T 2y4i_B           20 QTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQ-----------   85 (319)
T ss_dssp             --CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTT-----------
T ss_pred             ccccccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhc-----------
Confidence            3344556667777899999999999999999998753   48999986443211 12334455555555           


Q ss_pred             cccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         95 TNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        95 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                   ++|+||+++++++.+.+.++++||++++++|.+++...+ .+++..+..++.||+.||+|||++||+
T Consensus        86 -------------l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~  152 (319)
T 2y4i_B           86 -------------TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGIL  152 (319)
T ss_dssp             -------------CCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             -------------CCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                         899999999999999999999999999999999997654 589999999999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       153 H~dl  156 (319)
T 2y4i_B          153 HKDL  156 (319)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            9997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.88  E-value=6.3e-22  Score=149.26  Aligned_cols=138  Identities=21%  Similarity=0.299  Sum_probs=112.0

Q ss_pred             CCcccCcccccceEEEeeecccceeEEEEEEEecCC-cEEEEEEEecccccccchhHHHHHHHHHhhccccccccccccc
Q psy13106         19 DNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENG-TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETND   97 (177)
Q Consensus        19 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (177)
                      .....++.+.++|.+.+.||.|+||.||+|.+..++ +.||+|++....  .....+..|+.+++.+....         
T Consensus         9 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~---------   77 (355)
T 2eu9_A            9 LVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKD---------   77 (355)
T ss_dssp             BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHC---------
T ss_pred             cccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcC---------
Confidence            344567778899999999999999999999998776 789999986432  23355677888888744211         


Q ss_pred             CCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         98 NNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        98 ~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                               ..++.+++.+.+++...+.++++||++ ++++.+.+....  .+++..++.++.||+.||.|||++||+||
T Consensus        78 ---------~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~  147 (355)
T 2eu9_A           78 ---------KENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHT  147 (355)
T ss_dssp             ---------TTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred             ---------CCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence                     034455899999999999999999999 667877776553  59999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       148 Dl  149 (355)
T 2eu9_A          148 DL  149 (355)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=2.9e-22  Score=152.92  Aligned_cols=126  Identities=19%  Similarity=0.278  Sum_probs=103.2

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC---cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...|.+.+.||.|+||.||+|.+..++   ..+|+|.+...........+.+|+.+++.                     
T Consensus        88 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~---------------------  146 (373)
T 3c1x_A           88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD---------------------  146 (373)
T ss_dssp             TEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTT---------------------
T ss_pred             hceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh---------------------
Confidence            346889999999999999999986543   46899987543222233556677777766                     


Q ss_pred             cccCCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++. ..+..+++|||+++++|.+++.... .++...+..++.||+.||.|||++||+||||
T Consensus       147 ---l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  218 (373)
T 3c1x_A          147 ---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL  218 (373)
T ss_dssp             ---CCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCcc
Confidence               89999999999864 4567899999999999999997543 4889999999999999999999999999997

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.88  E-value=5.2e-22  Score=153.69  Aligned_cols=121  Identities=21%  Similarity=0.339  Sum_probs=101.1

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ...+|.+.+.||.|+||.||+|.+..+++.||||.+....     ....+|+.+++.                       
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~-----------------------  103 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRK-----------------------  103 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHT-----------------------
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHH-----------------------
Confidence            3447999999999999999999999999999999985432     233468888888                       


Q ss_pred             cCCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy13106        107 RLTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIV----EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP  176 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~D  176 (177)
                       ++|+||+++++++..      ..+++++|||+++ ++.+.+.    ....+++..++.++.||+.||.|||++||+|||
T Consensus       104 -l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  181 (420)
T 1j1b_A          104 -LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD  181 (420)
T ss_dssp             -CCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             -cCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence             899999999998843      2347899999965 6666554    345699999999999999999999999999999


Q ss_pred             C
Q psy13106        177 R  177 (177)
Q Consensus       177 l  177 (177)
                      |
T Consensus       182 l  182 (420)
T 1j1b_A          182 I  182 (420)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.88  E-value=5.1e-22  Score=146.16  Aligned_cols=129  Identities=27%  Similarity=0.383  Sum_probs=100.2

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEec-CCc--EEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRE-NGT--MFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-~~~--~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      .....++|++.+.||.|+||.||+|.+.. ++.  .+|+|++.......  ....+.+|+.++..               
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~---------------   77 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS---------------   77 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHH---------------
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHh---------------
Confidence            34445689999999999999999998753 333  68999986543222  23567788888888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++||||+++++++.++. .+++||++++++|.+++... ..+++..+..++.|++.||.|||++||+|+||
T Consensus        78 ---------l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di  147 (291)
T 1u46_A           78 ---------LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL  147 (291)
T ss_dssp             ---------CCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---------CCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence                     89999999999997654 88999999999999988764 56999999999999999999999999999997

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.88  E-value=9.3e-22  Score=154.62  Aligned_cols=125  Identities=26%  Similarity=0.349  Sum_probs=107.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+.++|.+.+.||.|+||.||+|.+..+++.||||++....   ....+..|+.++..                     
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~il~~---------------------   58 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRI---------------------   58 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC---SSCCHHHHHHHHHH---------------------
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc---ccHHHHHHHHHHHH---------------------
Confidence            356779999999999999999999999999999999875443   33567889998888                     


Q ss_pred             cccCCC-CCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTH-PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         +.| ++++.+..++.+....+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++|||||||
T Consensus        59 ---L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDI  129 (483)
T 3sv0_A           59 ---LQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI  129 (483)
T ss_dssp             ---TTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---hcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence               555 56666666777888999999999 8899999974 456999999999999999999999999999997

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.88  E-value=2.5e-22  Score=154.69  Aligned_cols=125  Identities=25%  Similarity=0.423  Sum_probs=99.2

Q ss_pred             cccccceEE-EeeecccceeEEEEEEEe--cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         25 PSIEEKYIL-KELLGTGAFSEVRLAESR--ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        25 ~~~~~~y~~-~~~lg~g~~g~v~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+.+.|.+ .++||.|+||.||+|.+.  .+++.||+|.+...   .....+.+|+.+++.                  
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~E~~~l~~------------------   74 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIALLRE------------------   74 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS---SCCHHHHHHHHHHHH------------------
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---CCCHHHHHHHHHHHh------------------
Confidence            455667887 558999999999999976  56889999998533   234567889999999                  


Q ss_pred             ccccccCCCCCceeeEEEEe--cCCeEEEEEeccCCcchhHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        102 DKDKERLTHPNIVQLIETFE--DKHKVYLVMELVTGGELFDRIVEK---------GSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                            ++||||+++++++.  ....+|++|||+. ++|.+++...         ..+++..++.++.||+.||.|||++
T Consensus        75 ------l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  147 (405)
T 3rgf_A           75 ------LKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN  147 (405)
T ss_dssp             ------CCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ------cCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                  89999999999995  4678999999995 5888877532         1489999999999999999999999


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       148 ~ivH~Dl  154 (405)
T 3rgf_A          148 WVLHRDL  154 (405)
T ss_dssp             TCCCCCC
T ss_pred             CEeCCCc
Confidence            9999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.88  E-value=4.6e-22  Score=150.47  Aligned_cols=125  Identities=22%  Similarity=0.420  Sum_probs=106.6

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+.++|.+.+.||.|+||.||+|.+..+++.||||.+....... ....+.+|+.++..                     
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   79 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH---------------------   79 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHH---------------------
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHh---------------------
Confidence            45678999999999999999999999999999999986533211 12456788888888                     


Q ss_pred             cccCCCCCceeeEEEEecCCe------EEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHK------VYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.....      +|++||++. ++|.+++..  .+++..+..++.||+.||.|||++||+||||
T Consensus        80 ---l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dl  152 (353)
T 3coi_A           80 ---MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDL  152 (353)
T ss_dssp             ---CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             ---cCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence               899999999999986653      599999996 588887643  4899999999999999999999999999997

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=8.7e-22  Score=148.04  Aligned_cols=128  Identities=23%  Similarity=0.338  Sum_probs=108.7

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+..+.++|.+.+.||.|+||.||+|.+  +++.||||.+...    ....+.+|.+++....               
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~---------------   92 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR----EERSWFREAEIYQTVM---------------   92 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHHHSC---------------
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch----hHHHHHHHHHHHHHhh---------------
Confidence            344455678999999999999999999987  4889999998543    2345667777776632               


Q ss_pred             cccccccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH--------  168 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH--------  168 (177)
                             ++||||+++++++....    .++++|||+++++|.+++... .+++..+..++.|++.||.|||        
T Consensus        93 -------l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~  164 (342)
T 1b6c_B           93 -------LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQG  164 (342)
T ss_dssp             -------CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTC
T ss_pred             -------cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence                   68999999999998765    799999999999999999764 5999999999999999999999        


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      +.||+||||
T Consensus       165 ~~~ivH~Dl  173 (342)
T 1b6c_B          165 KPAIAHRDL  173 (342)
T ss_dssp             BCEEECSCC
T ss_pred             cCCeeeCCC
Confidence            899999997

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.88  E-value=1.6e-23  Score=169.26  Aligned_cols=132  Identities=24%  Similarity=0.347  Sum_probs=107.7

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..++...++|.+.+.||.|+||.||+|.+..+++.||||++...........+.+|+.++..                  
T Consensus         7 ~~pg~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~------------------   68 (676)
T 3qa8_A            7 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKK------------------   68 (676)
T ss_dssp             ----------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHH------------------
T ss_pred             CCCCCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHh------------------
Confidence            33444557899999999999999999999999999999998654322334567889999998                  


Q ss_pred             ccccccCCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        102 DKDKERLTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVEKG---SYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                            ++||||+++++++..      ++..+++||||++++|.+++....   .+++..++.++.|++.||.|||++||
T Consensus        69 ------L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gI  142 (676)
T 3qa8_A           69 ------LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI  142 (676)
T ss_dssp             ------CCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTB
T ss_pred             ------CCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence                  899999999998765      677899999999999999997644   58999999999999999999999999


Q ss_pred             cccCC
Q psy13106        173 LSKPR  177 (177)
Q Consensus       173 iH~Dl  177 (177)
                      +||||
T Consensus       143 VHrDL  147 (676)
T 3qa8_A          143 IHRDL  147 (676)
T ss_dssp             CCCCC
T ss_pred             ccCCC
Confidence            99997

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.88  E-value=1.4e-21  Score=158.74  Aligned_cols=128  Identities=23%  Similarity=0.342  Sum_probs=107.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....++|.+.+.||.|+||.||+|.+..+   +..+|+|.+...........+.+|+.++..                  
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~------------------  447 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ------------------  447 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHH------------------
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHh------------------
Confidence            34456899999999999999999998654   457899987543322233567788888888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++||||+++++++. .+.+|+||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||
T Consensus       448 ------l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDi  517 (656)
T 2j0j_A          448 ------FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI  517 (656)
T ss_dssp             ------CCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ------CCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence                  89999999999985 466899999999999999997654 5899999999999999999999999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.88  E-value=1.4e-21  Score=145.53  Aligned_cols=130  Identities=21%  Similarity=0.281  Sum_probs=98.2

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHH-HHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEI-KVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ......++|.+.+.||.|+||.||+|.+..+++.||||++..............|. .++..                  
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~------------------   80 (318)
T 2dyl_A           19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS------------------   80 (318)
T ss_dssp             EEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHT------------------
T ss_pred             hhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHh------------------
Confidence            34445678999999999999999999999999999999986543222222233333 33444                  


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                            ++||||+++++++.+++.++++||++ ++.+..+... ...+++..+..++.||+.||.|||++ ||+|+||
T Consensus        81 ------~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl  151 (318)
T 2dyl_A           81 ------HDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV  151 (318)
T ss_dssp             ------TTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred             ------cCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCC
Confidence                  78999999999999999999999999 5555555543 45699999999999999999999995 9999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.87  E-value=1.2e-21  Score=145.25  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=104.0

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      |...+.||.|+||.||+|.+  +++.+|+|.+......   .....+.+|+.++..                        
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~------------------------   86 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK------------------------   86 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH------------------------
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHh------------------------
Confidence            45568999999999999986  5789999998643221   123567789999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE---KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+.+..+++||++++++|.+++..   ..++++..+..++.||+.||.|||++||+||||
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl  159 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI  159 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence            8999999999999999999999999999999998863   345899999999999999999999999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.87  E-value=2.1e-21  Score=149.13  Aligned_cols=125  Identities=22%  Similarity=0.314  Sum_probs=100.6

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+.....+|.+.+.||.|+||.||+|.+..+++ +|+|.+....     ....+|+.+++.                  
T Consensus        33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~-----~~~~~E~~il~~------------------   88 (394)
T 4e7w_A           33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK-----RFKNRELQIMRI------------------   88 (394)
T ss_dssp             SSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT-----TSCCHHHHHHHT------------------
T ss_pred             CCCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc-----chHHHHHHHHHh------------------
Confidence            3455667789999999999999999999887665 7888764322     223468888888                  


Q ss_pred             ccccccCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIV----EKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                            ++||||+++++++....      +++++|||+++ ++...+.    ....+++..++.++.||+.||.|||++|
T Consensus        89 ------l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (394)
T 4e7w_A           89 ------VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG  161 (394)
T ss_dssp             ------CCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ------CCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                  89999999999985433      48999999976 4444332    3456999999999999999999999999


Q ss_pred             ccccCC
Q psy13106        172 YLSKPR  177 (177)
Q Consensus       172 iiH~Dl  177 (177)
                      |+||||
T Consensus       162 ivHrDl  167 (394)
T 4e7w_A          162 ICHRDI  167 (394)
T ss_dssp             EECSCC
T ss_pred             ccCCCC
Confidence            999997

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.87  E-value=1.9e-21  Score=144.63  Aligned_cols=120  Identities=29%  Similarity=0.434  Sum_probs=103.4

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||.|+||.||++.+.  ++.+|+|.+...   .....+.+|+.++..                       
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~~E~~~l~~-----------------------   57 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE---SERKAFIVELRQLSR-----------------------   57 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST---THHHHHHHHHHHHHH-----------------------
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh---hHHHHHHHHHHHHhc-----------------------
Confidence            3468999999999999999999875  678999998532   233567889999888                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh---CCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS---YTEKDASMLIRQVLEAVDYMHE---ARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~---~giiH~Dl  177 (177)
                       ++||||+++++++.  +..+++|||+++++|.+++.....   ++...+..++.|++.||.|||+   +||+||||
T Consensus        58 -l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dl  131 (307)
T 2eva_A           58 -VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL  131 (307)
T ss_dssp             -CCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCC
T ss_pred             -CCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCC
Confidence             89999999999876  347899999999999999986543   6889999999999999999999   89999997

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.87  E-value=1.7e-21  Score=148.11  Aligned_cols=136  Identities=28%  Similarity=0.424  Sum_probs=109.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.+.+.||.|+||.||+|.+..+++.||||++....  .....+.+|+.++..+....             ....
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~-------------~~~~   80 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDAD-------------NTKE   80 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTC-------------CSHH
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhccc-------------ccch
Confidence            34568999999999999999999999999999999986432  12355678888888754210             0000


Q ss_pred             ccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEA-RYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~-giiH~Dl  177 (177)
                      ..+.|+||+++++++....    .++++||++ +++|.+++...  ..+++..+..++.||+.||+|||++ ||+||||
T Consensus        81 ~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Di  158 (373)
T 1q8y_A           81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDI  158 (373)
T ss_dssp             HHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCC
T ss_pred             hccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence            1135899999999987543    799999999 88999998763  4599999999999999999999998 9999997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.86  E-value=2.5e-21  Score=145.26  Aligned_cols=124  Identities=22%  Similarity=0.265  Sum_probs=98.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ....++|.+.+.||+|+||.||+|.+  +++.||||++....    ......|.++...                     
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~---------------------   61 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN----RQNFINEKNIYRV---------------------   61 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG----HHHHHHHHHHHTS---------------------
T ss_pred             CcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc----hhhHHHHHHHHHH---------------------
Confidence            34567899999999999999999976  58899999986432    1223333333321                     


Q ss_pred             cccCCCCCceeeEEEEe-----cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------
Q psy13106        105 KERLTHPNIVQLIETFE-----DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA---------  170 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---------  170 (177)
                       ..+.|+||+++++.+.     ....++++||||++++|.+++.... .+...+..++.||+.||.|||+.         
T Consensus        62 -~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~  139 (336)
T 3g2f_A           62 -PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP  139 (336)
T ss_dssp             -TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBC
T ss_pred             -HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence             1178999999997553     2346799999999999999997654 68899999999999999999999         


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       140 ~ivH~Di  146 (336)
T 3g2f_A          140 AISHRDL  146 (336)
T ss_dssp             CEECSSC
T ss_pred             ceeeccc
Confidence            9999997

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.86  E-value=4e-21  Score=145.45  Aligned_cols=127  Identities=20%  Similarity=0.279  Sum_probs=91.7

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .....++|.+.+.||.|+||.||+|.+..+++.||||.+....  ........++..+..                    
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~--------------------   75 (360)
T 3e3p_A           18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAV--------------------   75 (360)
T ss_dssp             HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHH--------------------
T ss_pred             chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHh--------------------
Confidence            3344568999999999999999999999999999999885432  122344455555665                    


Q ss_pred             ccccCCCCCceeeEEEEecCC-------eEEEEEeccCCcchhHHH----HhcCCCCHHHHHHHHHHHHHHHHHHH--hC
Q psy13106        104 DKERLTHPNIVQLIETFEDKH-------KVYLVMELVTGGELFDRI----VEKGSYTEKDASMLIRQVLEAVDYMH--EA  170 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~-------~~~lv~e~~~~~~L~~~l----~~~~~~~~~~~~~~~~qi~~~l~~LH--~~  170 (177)
                          ++||||+++++++....       +++++|||+++ +|...+    .....+++..+..++.|++.||.|||  ++
T Consensus        76 ----l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~  150 (360)
T 3e3p_A           76 ----LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV  150 (360)
T ss_dssp             ----HCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred             ----cCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence                78999999999986433       38999999976 554433    34556899999999999999999999  99


Q ss_pred             CccccCC
Q psy13106        171 RYLSKPR  177 (177)
Q Consensus       171 giiH~Dl  177 (177)
                      ||+||||
T Consensus       151 ~ivH~Dl  157 (360)
T 3e3p_A          151 NVCHRDI  157 (360)
T ss_dssp             CCBCSCC
T ss_pred             CeecCcC
Confidence            9999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.86  E-value=7.6e-21  Score=145.36  Aligned_cols=135  Identities=21%  Similarity=0.294  Sum_probs=110.3

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ..+..+.++|.+.+.||.|+||.||+|.+..+++.||||++....  ........|+.++..+....             
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~-------------  111 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHD-------------  111 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCS-------------
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcc-------------
Confidence            455667789999999999999999999999999999999986432  12345667777777643210             


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--hCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMH--EARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH--~~giiH~Dl  177 (177)
                           ...+++++.+.+.+...+.+|+|||++. ++|.+++...  ..+++..++.++.|++.||.|||  +.||+||||
T Consensus       112 -----~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDl  185 (382)
T 2vx3_A          112 -----TEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDL  185 (382)
T ss_dssp             -----SGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCC
T ss_pred             -----cccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCC
Confidence                 0335569999999999999999999995 5999998765  35899999999999999999999  579999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.86  E-value=2.2e-21  Score=147.78  Aligned_cols=127  Identities=18%  Similarity=0.132  Sum_probs=89.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...|.+.+.||.|+||.||+|.+..+++.||||++......  .....+..|+.++..+.                    
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~--------------------  120 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL--------------------  120 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhc--------------------
Confidence            34599999999999999999999999999999999765421  12245566766666522                    


Q ss_pred             ccCCCCCceeeE-------EEEecC-----------------CeEEEEEeccCCcchhHHHHhcC-CCCHHHH------H
Q psy13106        106 ERLTHPNIVQLI-------ETFEDK-----------------HKVYLVMELVTGGELFDRIVEKG-SYTEKDA------S  154 (177)
Q Consensus       106 ~~~~h~~i~~~~-------~~~~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~------~  154 (177)
                        -+||||++++       +.+..+                 ..+|+||||++ ++|.+++.... .++....      .
T Consensus       121 --~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~  197 (371)
T 3q60_A          121 --GESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALH  197 (371)
T ss_dssp             --C----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred             --ccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHH
Confidence              1599977755       444322                 34899999997 89999997643 3444444      5


Q ss_pred             HHHHHHHHHHHHHHhCCccccCC
Q psy13106        155 MLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       155 ~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .++.||+.||+|||++||+||||
T Consensus       198 ~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          198 ILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTC
T ss_pred             HHHHHHHHHHHHHHHCCCccCcC
Confidence            66799999999999999999997

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.86  E-value=4.7e-21  Score=148.85  Aligned_cols=119  Identities=21%  Similarity=0.308  Sum_probs=99.9

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .+|.+.+.||.|+||+|+. ....+++.||||.+....    .....+|+.+++.                        +
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~------------------------l   74 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC----FSFADREVQLLRE------------------------S   74 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT----EEECHHHHHHHHH------------------------S
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH----HHHHHHHHHHHHh------------------------c
Confidence            3699999999999999763 344578999999985432    2345678888888                        5


Q ss_pred             -CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 -THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 -~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       +||||+++++++.+...+|++||+|. ++|.+++.... ...+..+..++.||+.||.|||++||+||||
T Consensus        75 ~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  144 (432)
T 3p23_A           75 DEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDL  144 (432)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             cCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCC
Confidence             79999999999999999999999995 59999987654 3556667889999999999999999999997

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.85  E-value=1.9e-20  Score=145.49  Aligned_cols=124  Identities=23%  Similarity=0.287  Sum_probs=99.0

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+.+.|.+.+.||.|+||+||.+ ...+++.||||.+....    .....+|+.++...                    
T Consensus        11 ~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l--------------------   65 (434)
T 2rio_A           11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF----CDIALMEIKLLTES--------------------   65 (434)
T ss_dssp             CSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG----HHHHHHHHHHHHHH--------------------
T ss_pred             hhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH----HHHHHHHHHHHHhc--------------------
Confidence            345667888899999999999865 44578999999985432    24567788888762                    


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCC-------HHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYT-------EKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .+||||+++++++.+.+.+|++||+|+ ++|.+++.......       +..+..++.||+.||+|||++||+||||
T Consensus        66 ---~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDL  141 (434)
T 2rio_A           66 ---DDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDL  141 (434)
T ss_dssp             ---TTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---cCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCC
Confidence               379999999999999999999999995 69999997654322       2345679999999999999999999997

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.84  E-value=1.3e-20  Score=150.82  Aligned_cols=115  Identities=17%  Similarity=0.152  Sum_probs=89.8

Q ss_pred             ecccceeEEEEEEEecCCcEEEEEEEeccccc---------ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         37 LGTGAFSEVRLAESRENGTMFAVKIIDKKALK---------GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        37 lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~---------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|+.|....++....++.+++|++......         .....+.+|+.+++++                       
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~-----------------------  298 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQP-----------------------  298 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSC-----------------------
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhc-----------------------
Confidence            45666666666667778899999999754221         1124578899999883                       


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      -.|+||++++++++++..+|||||||+|++|.+++...+++++.   .++.||+.||+|+|++|||||||
T Consensus       299 ~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDI  365 (569)
T 4azs_A          299 PAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDV  365 (569)
T ss_dssp             CTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCC
T ss_pred             CCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccC
Confidence            16999999999999999999999999999999999988888765   47899999999999999999998

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.78  E-value=7.6e-19  Score=129.32  Aligned_cols=109  Identities=20%  Similarity=0.197  Sum_probs=82.5

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-----------------cchhHHHHHHHHHhhccccccccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-----------------KEDSLENEIKVLRRFSQSVHNRLDET   95 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-----------------~~~~~~~e~~~~~~~~~~~~~~~~~~   95 (177)
                      +.+.||.|+||.||+|.+ .+++.+|+|.++......                 ....+.+|+.++..            
T Consensus        94 ~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~------------  160 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK------------  160 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH------------
T ss_pred             ecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh------------
Confidence            449999999999999999 789999999986432111                 12346788888888            


Q ss_pred             ccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106         96 NDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus        96 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                                  +.|.   .+++.+.. +..|++|||+++++|.+ +..      .....++.|++.||.|||++||+||
T Consensus       161 ------------l~~~---~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHr  217 (282)
T 1zar_A          161 ------------LQGL---AVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHG  217 (282)
T ss_dssp             ------------TTTS---SSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             ------------ccCC---CcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeC
Confidence                        6644   44444433 45699999999999988 421      2345799999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       218 Dl  219 (282)
T 1zar_A          218 DL  219 (282)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.76  E-value=1.5e-18  Score=138.08  Aligned_cols=112  Identities=17%  Similarity=0.139  Sum_probs=82.5

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-------chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-------EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...+.||+|+||.||++.  ..++.+++|..........       ...+.+|+.+++.                     
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~---------------------  395 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLAL---------------------  395 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH---------------------
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHh---------------------
Confidence            346689999999999994  4577899998654322111       1346788999988                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++..+.......|++|||+++++|.+++..        +..++.|++.||+|||++||+||||
T Consensus       396 ---l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDi  457 (540)
T 3en9_A          396 ---VKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDL  457 (540)
T ss_dssp             ---GGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTC
T ss_pred             ---cCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCC
Confidence               8899999554444466677999999999999998865        5689999999999999999999997

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.74  E-value=9.9e-18  Score=129.44  Aligned_cols=147  Identities=13%  Similarity=0.062  Sum_probs=90.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...|...+.||+|+||.||+|.+..+++.||||++.......  ....+.+|+.++..+.....-.......  ......
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~--~~~~~~  154 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL--RFIFPF  154 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHT--CBCCCC
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhc--ccccch
Confidence            345889999999999999999999999999999986433222  2355677777777643200000000000  000000


Q ss_pred             ccCCCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106        106 ERLTHPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIVE-------KGSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                      .....++...+...+..     ...++++|+.+ +++|.+++..       ...+++.....++.||+.||+|||++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii  233 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  233 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            00111222222222222     23478888877 6799988841       22377788889999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       234 HrDi  237 (413)
T 3dzo_A          234 HTYL  237 (413)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            9997

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.70  E-value=5.2e-17  Score=118.04  Aligned_cols=117  Identities=23%  Similarity=0.194  Sum_probs=84.2

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcE--EEEEEEeccccccc-----------------------chhHHHHHHHHHhh
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTM--FAVKIIDKKALKGK-----------------------EDSLENEIKVLRRF   84 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~--~avK~i~~~~~~~~-----------------------~~~~~~e~~~~~~~   84 (177)
                      -|.+.+.||.|+||.||+|.+..+++.  +|||++........                       ...+.+|..++.. 
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-  126 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER-  126 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH-
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH-
Confidence            378899999999999999999778888  99999754311100                       0246678888877 


Q ss_pred             cccccccccccccCCCcccccccCCCCC--ceeeEEEEecCCeEEEEEeccCC-c----chhHHHHhcCCCCHHHHHHHH
Q psy13106         85 SQSVHNRLDETNDNNSNDKDKERLTHPN--IVQLIETFEDKHKVYLVMELVTG-G----ELFDRIVEKGSYTEKDASMLI  157 (177)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~  157 (177)
                                             +.|++  ++.++..    ...++||||+.+ |    +|.+....   .++..+..++
T Consensus       127 -----------------------l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~  176 (258)
T 1zth_A          127 -----------------------AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIF  176 (258)
T ss_dssp             -----------------------HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHH
T ss_pred             -----------------------HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHH
Confidence                                   44443  3444432    246899999942 3    56555332   3355678899


Q ss_pred             HHHHHHHHHHH-hCCccccCC
Q psy13106        158 RQVLEAVDYMH-EARYLSKPR  177 (177)
Q Consensus       158 ~qi~~~l~~LH-~~giiH~Dl  177 (177)
                      .|++.+|.||| +.||+||||
T Consensus       177 ~qi~~~l~~lH~~~givHrDl  197 (258)
T 1zth_A          177 NDVVENVKRLYQEAELVHADL  197 (258)
T ss_dssp             HHHHHHHHHHHHTSCEECSSC
T ss_pred             HHHHHHHHHHHHHCCEEeCCC
Confidence            99999999999 999999997

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.59  E-value=5.4e-16  Score=118.09  Aligned_cols=112  Identities=15%  Similarity=0.197  Sum_probs=75.9

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-----cc--------chh--------HHHHHHHHHhhccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-----GK--------EDS--------LENEIKVLRRFSQSVH   89 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-----~~--------~~~--------~~~e~~~~~~~~~~~~   89 (177)
                      |.+...||.|++|.||+|.+. +++.+|||+++.....     ..        ...        ...|...+..      
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r------  169 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA------  169 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH------
Confidence            889999999999999999875 5889999997543211     00        001        1233444444      


Q ss_pred             ccccccccCCCcccccccCCCCC--ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy13106         90 NRLDETNDNNSNDKDKERLTHPN--IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYM  167 (177)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~L  167 (177)
                                        +.+.+  ++.++...    ..++||||++|++|.++.      ..+....++.||+.+|.+|
T Consensus       170 ------------------L~~~gv~vp~p~~~~----~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~l  221 (397)
T 4gyi_A          170 ------------------LYEEGFPVPEPIAQS----RHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRL  221 (397)
T ss_dssp             ------------------HHHTTCSCCCEEEEE----TTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHH
T ss_pred             ------------------HHhcCCCCCeeeecc----CceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHH
Confidence                              22222  33334321    237999999988886543      1234567889999999999


Q ss_pred             HhCCccccCC
Q psy13106        168 HEARYLSKPR  177 (177)
Q Consensus       168 H~~giiH~Dl  177 (177)
                      |++|||||||
T Consensus       222 H~~gIVHrDL  231 (397)
T 4gyi_A          222 AKHGLIHGDF  231 (397)
T ss_dssp             HHTTEECSCC
T ss_pred             HHCCCcCCCC
Confidence            9999999997

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.07  E-value=2e-09  Score=77.79  Aligned_cols=110  Identities=15%  Similarity=0.118  Sum_probs=84.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+...++.|+.+.||++...  ++.+++|..+.... .....+.+|..++..+.                       
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~-----------------------   67 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYK-GTTYDVEREKDMMLWLE-----------------------   67 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHT-----------------------
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHh-----------------------
Confidence            46888999999999999998743  67899999764321 23356888998888742                       


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                      .+..+++++++....+..|++||+++|.+|.+.+.     +......++.++..+|+.||+
T Consensus        68 ~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           68 GKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             TTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhC
Confidence            35678889998888889999999999998877531     122234678899999999998

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.68  E-value=1.5e-07  Score=71.08  Aligned_cols=112  Identities=17%  Similarity=0.303  Sum_probs=77.0

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEe--cccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIID--KKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      ...+.++.|.++.+|+....  +..+++|..+  ..........+.+|..+++.+..                      .
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~----------------------~   96 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAG----------------------T   96 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTT----------------------S
T ss_pred             ceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhc----------------------C
Confidence            34678899999999988754  4678888765  32222233567889998888432                      2


Q ss_pred             CCCceeeEEEEecC---CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        110 HPNIVQLIETFEDK---HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       110 h~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                      +.++++++.+..+.   +..|++||+++|..+.+..  ...++......++.++...|..||.
T Consensus        97 ~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A           97 DVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             SSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            44578888877655   4589999999987775422  1236778888899999999999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.59  E-value=1.2e-06  Score=62.66  Aligned_cols=107  Identities=13%  Similarity=0.129  Sum_probs=71.1

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|.+....+.|..+.||++.. .++..+++|.....    ....+..|..+++.+..                      .
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~----------------------~   73 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG----ALNELQDEAARLSWLAT----------------------T   73 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC----TTSCHHHHHHHHHHHHT----------------------T
T ss_pred             CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc----cchhhhHHHHHHHHHHh----------------------C
Confidence            466655545677789999854 45677999986432    22457788888887431                      1


Q ss_pred             CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        110 HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       110 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      .-.+++++.+....+..+++||+++|.++.  ..   ..+.   ..++.++...|..||+..
T Consensus        74 ~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~---~~~~---~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           74 GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS---HLAP---AEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             TCCBCCEEEEEECSSCEEEEEECCSSEETT--TS---CCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             CCCCCeEEEeccCCCCCEEEEEecCCcccC--cC---cCCH---hHHHHHHHHHHHHHhCCC
Confidence            223677888887777899999999998883  21   1221   245667777777777643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.44  E-value=0.0044  Score=45.54  Aligned_cols=107  Identities=18%  Similarity=0.157  Sum_probs=75.0

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.++.|....+|..     +..+++|+....   .....+..|..++..+...                     ..-.+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~---~~~~~~~~E~~~L~~L~~~---------------------~~v~V   74 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKSQ---QGADELNKEIQLLPLLVGC---------------------VKVNI   74 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTT---------------------CSSBC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCCc---hHHHHHHHHHHHHHHHHhc---------------------CCCCC
Confidence            445788888888877     467888874211   1235678899988884321                     01235


Q ss_pred             eeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        114 VQLIETFE-DKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       114 ~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      +.++.+.. ..+..|++|++++|.++.+....  .++......+..++...|.-||+..
T Consensus        75 P~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~--~l~~~~~~~~~~~lg~~La~LH~~~  131 (306)
T 3tdw_A           75 PQYVYIGKRSDGNPFVGYRKVQGQILGEDGMA--VLPDDAKDRLALQLAEFMNELSAFP  131 (306)
T ss_dssp             CCEEEEEECTTSCEEEEEECCCSEECHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CCeEeecccCCCceEEEEeccCCeECchhhhh--hCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            66666664 45567899999999888764322  3677888889999999999999864

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.36  E-value=0.0069  Score=43.32  Aligned_cols=103  Identities=10%  Similarity=0.141  Sum_probs=73.0

Q ss_pred             eccccee-EEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCcee
Q psy13106         37 LGTGAFS-EVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQ  115 (177)
Q Consensus        37 lg~g~~g-~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~  115 (177)
                      +..|..+ .||+......+..+.+|.-+..    ....+.+|..+++.+.                       .+-.+++
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~-----------------------~~vPVP~   84 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLT-----------------------AFMPLPT   84 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHT-----------------------TTSCCCC
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhc-----------------------cCCCcCe
Confidence            3344444 6888777767778899975432    3355778888887643                       2334778


Q ss_pred             eEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        116 LIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       116 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      ++.+..+.+..|++|++++|.++.+.....    ......+..++...|.-||..
T Consensus        85 v~~~~~~~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~  135 (272)
T 4gkh_A           85 IKHFIRTPDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSI  135 (272)
T ss_dssp             EEEEEEETTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTS
T ss_pred             EEEEEEECCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCC
Confidence            888888888999999999998887765432    223345778888999999975

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.27  E-value=0.006  Score=45.12  Aligned_cols=98  Identities=16%  Similarity=0.196  Sum_probs=70.5

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      -.+.|+.|....+|+...  .+..+.+|..+..    ....+..|...++.+..                     .....
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~---------------------~~~v~   92 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS----YRSMFRAEADQLALLAK---------------------TNSIN   92 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHH---------------------TTSSB
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHh---------------------hCCCC
Confidence            356789999999998874  4678888986432    23456788887777432                     12456


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      +++++.+....+..|++||++++..+..              ....++...|+-||..+
T Consensus        93 VP~vl~~~~~~g~~~lvme~l~G~~~~~--------------~~~~~lG~~LA~LH~~~  137 (312)
T 3jr1_A           93 VPLVYGIGNSQGHSFLLLEALNKSKNKQ--------------SSFTIFAEKIAQLHQIQ  137 (312)
T ss_dssp             CCCEEEEEECSSEEEEEEECCCCCCCCT--------------THHHHHHHHHHHHHHCC
T ss_pred             cceEEEEeecCCceEEEEEeccCCCCCc--------------hhHHHHHHHHHHHHcCC
Confidence            7888888777788999999998865421              23457888889999864

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.25  E-value=0.0018  Score=47.48  Aligned_cols=106  Identities=14%  Similarity=0.160  Sum_probs=72.0

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      ++.++.|....+|...     ..+++|+.+..   .....+.+|..++..+...                     ..-.+
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~---------------------~~v~v   75 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNK---------------------LPLPI   75 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTS---------------------SSSCC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc---chHHHHHHHHHHHHHHHhc---------------------CCCCC
Confidence            3458889999998763     46888875322   1235678888888774221                     11124


Q ss_pred             eeeEEEEecCC---eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        114 VQLIETFEDKH---KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       114 ~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +.++.......   ..|++|++++|.++.+....  .++..+...++.++...|..||+.
T Consensus        76 P~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~--~l~~~~~~~~~~~l~~~la~LH~~  133 (304)
T 3sg8_A           76 PEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLN--NLPKQSQNQAAKDLARFLSELHSI  133 (304)
T ss_dssp             CCEEEECCCCSSCSCSCEEEECCCCEECCHHHHH--TSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CceEeecCCCCCCCcceEEEcccCCeECCccccc--cCCHHHHHHHHHHHHHHHHHHHcC
Confidence            45554433332   35889999999888764332  378888899999999999999974

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.03  E-value=0.0073  Score=45.90  Aligned_cols=83  Identities=17%  Similarity=0.079  Sum_probs=50.4

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccc--c----ccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--K----GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..+.+|.|..+.||++.....++.+++|.......  .    ........|.+++..+..                    
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~--------------------   93 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE--------------------   93 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHT--------------------
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhh--------------------
Confidence            36689999999999997665677899998653211  0    122445678888876432                    


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcch
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGEL  138 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  138 (177)
                       .....++.++.+  +....+++||++++...
T Consensus        94 -~~~~~vP~~~~~--d~~~~~lvmE~l~g~~~  122 (397)
T 2olc_A           94 -HVPHLVPRVFYS--DTEMAVTVMEDLSHLKI  122 (397)
T ss_dssp             -TCGGGSCCEEEE--ETTTTEEEECCCTTSEE
T ss_pred             -hCCCCcCeEEEE--cCCccEEEEEeCCCcch
Confidence             112245566644  34456799999976433

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.78  E-value=0.021  Score=42.55  Aligned_cols=120  Identities=13%  Similarity=0.112  Sum_probs=76.5

Q ss_pred             eEEEeee-cccceeEEEEEEEe--c----CCcEEEEEEEecccc--cccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         31 YILKELL-GTGAFSEVRLAESR--E----NGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        31 y~~~~~l-g~g~~g~v~~~~~~--~----~~~~~avK~i~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.| +.|....+|+....  .    .++.+++|..+....  ......+.+|..++..+...              
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~--------------   87 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGEL--------------   87 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHH--------------
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhc--------------
Confidence            3445677 88888999987643  1    156788887543220  00124577888888774321              


Q ss_pred             ccccccCCCCCceeeEEEEecC---CeEEEEEeccCCcchhHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDK---HKVYLVMELVTGGELFDRIVEK------GSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                             ..-.+++++.+..+.   +..|++||+++|..+.+.+...      ..++......+..++...|.-||+..
T Consensus        88 -------~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A           88 -------TDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             -------CCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             -------CCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence                   123467777766544   3568999999987776532110      12456666778899999999999753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.72  E-value=0.35  Score=34.79  Aligned_cols=103  Identities=17%  Similarity=0.046  Sum_probs=64.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .....-++.+|.|..+.||+.+.. +++.+.+|..+... ......+.+|...++.+..                     
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~---------------------   70 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDA-PALDGLFRAEALGLDWLGR---------------------   70 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTC---------------------
T ss_pred             CCCeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHh---------------------
Confidence            345667889999999999998754 57889999764332 2223456788888887432                     


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      ...-.+++++...  .  -+++||+++++...          ...    ..++...|.-+|...
T Consensus        71 ~~~vpvP~v~~~~--~--~~lv~e~l~~~~~~----------~~~----~~~lg~~La~lH~~~  116 (288)
T 3f7w_A           71 SFGSPVPQVAGWD--D--RTLAMEWVDERPPT----------PEA----AERFGHQLAAMHLAG  116 (288)
T ss_dssp             STTCCSCCEEEEE--T--TEEEEECCCCCCCC----------HHH----HHHHHHHHHHHHHTC
T ss_pred             hCCCCcceEEecc--C--ceEEEEeecccCCC----------hHH----HHHHHHHHHhhhhcc
Confidence            1122345555542  2  36889998764322          222    234566677788653

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.24  E-value=0.6  Score=35.61  Aligned_cols=108  Identities=11%  Similarity=0.076  Sum_probs=59.0

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccc--ccc----chhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGK----EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~--~~~----~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      -.+.+|.|..+.||++..  .++.++||.......  ...    ......|.+++.....                    
T Consensus        38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~--------------------   95 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGN--------------------   95 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHH--------------------
T ss_pred             EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHh--------------------
Confidence            356789999999999853  467889995432110  111    1222334443333211                    


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEecc-CC-cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELV-TG-GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                       .....+++++.+.  ....+++||++ ++ ..+.+.+...... .    ..+.++...|+-+|..
T Consensus        96 -~~~~~vP~v~~~~--~~~~~lv~e~l~~g~~~l~~~l~~~~~~-~----~~~~~lg~~La~lH~~  153 (420)
T 2pyw_A           96 -LSPDHVPEVYHFD--RTMALIGMRYLEPPHIILRKGLIAGIEY-P----FLADHMSDYMAKTLFF  153 (420)
T ss_dssp             -HSGGGSCCEEEEE--TTTTEEEECCCCTTCEEHHHHHHHTCCC-T----THHHHHHHHHHHHHHT
T ss_pred             -hCCCCCCeEEEEC--CCccEEEEeecCCcchhHHHHHhcCCCC-H----HHHHHHHHHHHHHHHh
Confidence             1234567777664  45678999999 87 3443333322111 1    2345566667777753

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=93.38  E-value=0.65  Score=35.20  Aligned_cols=102  Identities=12%  Similarity=0.047  Sum_probs=58.8

Q ss_pred             EeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         34 KELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++.+..|....+|++....       .++.+.+|+....  ........+|..+++.++.                    
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~--------------------  112 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAE--------------------  112 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHH--------------------
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHh--------------------
Confidence            4567778888899887642       3468888875221  1123445678888877543                    


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                         +.-.+++++.+.+    .++|+|++|.+|..--     +..+   .+..+++..|+-||+..+
T Consensus       113 ---~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~-----l~~p---~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          113 ---RSLGPQLYGVFPE----GRLEQYIPSRPLKTQE-----LREP---VLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             ---TTSSCCEEEEETT----EEEEECCSEEECCGGG-----GGCH---HHHHHHHHHHHHHHTCCC
T ss_pred             ---cCCCCeEEEEcCC----ccEEEEecCccCChhH-----hCCH---HHHHHHHHHHHHHhCCCC
Confidence               1113566666543    2899999986664211     1112   355678899999997643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=92.43  E-value=0.86  Score=33.24  Aligned_cols=100  Identities=11%  Similarity=0.134  Sum_probs=50.9

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.|+.|..+.+|++...  +..+++|.....     ...+..|..++..+...-                   +.-|.+
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g-------------------~~vp~~   90 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP-----EKKALFSIFAQDYLAKKG-------------------MNVPGI   90 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC-----HHHHHHHHHHHHHHHHHT-------------------CSSCCB
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC-----HHHHHHHHHHHHHHHHcC-------------------CCCCce
Confidence            445666778899988653  345889987531     133444555555432210                   111222


Q ss_pred             eeeE-E--EEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        114 VQLI-E--TFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       114 ~~~~-~--~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +... +  +....+..+++|+|++|..+..       .+..    .+.++...|+-||..
T Consensus        91 ~~~~~g~~~~~~~~~~~~l~~~i~G~~~~~-------~~~~----~~~~~g~~La~lH~~  139 (346)
T 2q83_A           91 LPNKKGSLYSKHGSFLFVVYDWIEGRPFEL-------TVKQ----DLEFIMKGLADFHTA  139 (346)
T ss_dssp             CCCTTSCSCEEETTEEEEEEECCCCBCCCT-------TSHH----HHHHHHHHHHHHHHH
T ss_pred             eecCCCCEEEEECCEEEEEEEeecCccCCC-------CCHH----HHHHHHHHHHHHHHh
Confidence            2100 0  1123567899999998865531       1111    246677777777753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.00  E-value=3.1  Score=31.90  Aligned_cols=101  Identities=13%  Similarity=0.073  Sum_probs=61.9

Q ss_pred             EEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      -++.|+.|....+|++....       .+..+.+|+....   .....+..|..++..++.                   
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~-------------------  134 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSE-------------------  134 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHH-------------------
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHh-------------------
Confidence            45678888889999997642       2568888886321   111345578877776442                   


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                          +.-.+++++.+.  +  .++++|++|.++..--     +..   ..++.+++..|+-||...
T Consensus       135 ----~g~~P~l~~~~~--~--g~v~e~l~G~~l~~~~-----l~~---~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          135 ----RHLGPKLYGIFS--G--GRLEEYIPSRPLSCHE-----ISL---AHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             ----TTSSSCEEEEET--T--EEEECCCCEEECCTTG-----GGS---HHHHHHHHHHHHHHTTCC
T ss_pred             ----CCCCCcEEEEeC--C--CEEEEEeCCcccChhh-----cCC---HHHHHHHHHHHHHHhCCc
Confidence                111356666543  2  2889999875553210     111   134677888899999754

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=87.87  E-value=5.4  Score=30.97  Aligned_cols=103  Identities=10%  Similarity=0.136  Sum_probs=61.1

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      -.+.|+.|....+|++.....+..+.+|+.....  ...-....|..++..++.                       +.-
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~-----------------------~gl  166 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYN-----------------------KNI  166 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTT-----------------------SSS
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHh-----------------------cCC
Confidence            3567888888999998765434778888763221  111122578888877432                       122


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                      .+++++.+.  +.  ++|+|++|.+|..     ..+...   .++.+++..|+-||....
T Consensus       167 ~P~ll~~~~--~G--~v~e~I~G~~l~~-----~~l~~~---~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          167 AKKIYVFFT--NG--RIEEFMDGYALSR-----EDIKNP---KFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             BCCEEEEET--TE--EEEECCCSEECCT-----TTTTSH---HHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeC--Ce--EEEEeeCCccCCh-----hhcCCH---HHHHHHHHHHHHHhcCCc
Confidence            356666652  22  4999998866532     112211   356778889999997643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=87.63  E-value=1.3  Score=31.93  Aligned_cols=98  Identities=12%  Similarity=-0.018  Sum_probs=57.3

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNI  113 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i  113 (177)
                      .+.|+.|....+|++      ..+.+|+.....  ........|..++..++.                     .+-+  
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~--~~~~~r~~E~~~l~~l~~---------------------~g~~--   71 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGT--EEYINRANEAVAAREAAK---------------------AGVS--   71 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC------CCCHHHHHHHHHHHHH---------------------TTSS--
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCc--cceeCHHHHHHHHHHHHH---------------------cCCC--
Confidence            677888999999988      468888764321  111223567777766432                     1111  


Q ss_pred             eeeEEEEecCCeEEEEEecc-CCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        114 VQLIETFEDKHKVYLVMELV-TGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       114 ~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      ++++...  +..-+++++|+ ++.++.......       ...++.+++..|+-||+.+
T Consensus        72 P~~~~~~--~~~~~~v~e~i~~g~~l~~~~~~~-------~~~~~~~~~~~La~lH~~~  121 (301)
T 3dxq_A           72 PEVLHVD--PATGVMVTRYIAGAQTMSPEKFKT-------RPGSPARAGEAFRKLHGSG  121 (301)
T ss_dssp             CCEEEEC--TTTCCEEEECCTTCEECCHHHHHH-------STTHHHHHHHHHHHHHTSC
T ss_pred             CceEEEE--CCCCEEEEeecCCCccCCHhhHhh-------hHHHHHHHHHHHHHHhCCC
Confidence            4555443  33346889999 665553311110       0135677888888899764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=87.44  E-value=5.9  Score=28.84  Aligned_cols=105  Identities=13%  Similarity=0.122  Sum_probs=54.5

Q ss_pred             EeeecccceeE-EEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCC
Q psy13106         34 KELLGTGAFSE-VRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPN  112 (177)
Q Consensus        34 ~~~lg~g~~g~-v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  112 (177)
                      .+.|+.|.... +|+... .+++.+.+|..+..    ....+..|..++..+..                     . .-.
T Consensus        23 ~~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~----~~~~~~~e~~~l~~L~~---------------------~-g~~   75 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRS-PTGAKAVLMDWSPE----EGGDTQPFVDLAQYLRN---------------------L-DIS   75 (333)
T ss_dssp             ECC--------CCEEEEC-TTCCEEEEEECCTT----TTCCSHHHHHHHHHHHH---------------------T-TCB
T ss_pred             eeECCCCCCCceEEEEEc-CCCCeEEEEECCCC----CCccccHHHHHHHHHHh---------------------C-CCC
Confidence            34555554444 445532 12556666653221    11345567777666432                     1 223


Q ss_pred             ceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        113 IVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       113 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      +++++.+-.+.+  +++||.+.+..+.+.+.... ...   .....++...|.-||...
T Consensus        76 vP~v~~~d~~~g--~ll~e~l~~~~l~~~l~~~~-~~~---~~~~~~~~~~La~lH~~~  128 (333)
T 3csv_A           76 APEIYAEEHARG--LLLIEDLGDALFTEVINNDP-AQE---MPLYRAAVDLLIHLHDAQ  128 (333)
T ss_dssp             CCCEEEEETTTT--EEEECCCCSCBHHHHHHHCG-GGH---HHHHHHHHHHHHHHHTSC
T ss_pred             CCceeeecCCCC--EEEEeeCCCcchHHHhcCCC-ccH---HHHHHHHHHHHHHHhcCC
Confidence            556665533333  68999997777777665432 221   346678888899999753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=84.31  E-value=9.6  Score=27.46  Aligned_cols=100  Identities=13%  Similarity=0.078  Sum_probs=53.6

Q ss_pred             EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      .-.+.|+.|....+|+....  +..+++|.....   .....+..|..++..+...-                   +.  
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~---~~~~~l~~e~~~l~~L~~~g-------------------~~--   78 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTT--KDPLILTLYEKR---VEKNDLPFFLGLMQHLAAKG-------------------LS--   78 (322)
T ss_dssp             EEEEEECC---EEEEEEEES--SCCEEEEEECC------CCHHHHHHHHHHHHHHTT-------------------CC--
T ss_pred             eEeeccCCCcccceEEEEeC--CccEEEEEeCCC---CCHHHHHHHHHHHHHHHHCC-------------------CC--
Confidence            34567788888889988643  336888987542   12345666777776644210                   11  


Q ss_pred             CceeeEEE------EecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        112 NIVQLIET------FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       112 ~i~~~~~~------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                       ++.++..      ....+..+++|++++|..+..       .+.    ..+.++...|+-||.
T Consensus        79 -vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~-------~~~----~~~~~~g~~La~lH~  130 (322)
T 2ppq_A           79 -CPLPLPRKDGELLGELSGRPAALISFLEGMWLRK-------PEA----KHCREVGKALAAMHL  130 (322)
T ss_dssp             -CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSS-------CCH----HHHHHHHHHHHHHHH
T ss_pred             -CCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCC-------CCH----HHHHHHHHHHHHHHH
Confidence             2222211      112356789999998865421       121    234566667777775

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=83.04  E-value=14  Score=28.37  Aligned_cols=103  Identities=16%  Similarity=0.156  Sum_probs=61.1

Q ss_pred             EEeeecccceeEEEEEEEecC-------CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         33 LKELLGTGAFSEVRLAESREN-------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      -++.+..|....+|++.....       +..+.+++.....  ...-...+|..+++.++.                   
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~-------------------  132 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSN-------------------  132 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHH-------------------
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHh-------------------
Confidence            355677788888998876521       5778888753221  111234578887777542                   


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY  172 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gi  172 (177)
                          ..-.+++++.+  .+  +++|+|++|..|..--     +..+   .+..+++..|+-||+..+
T Consensus       133 ----~gi~P~l~~~~--~~--~~I~efI~G~~l~~~~-----l~~~---~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          133 ----INIAPNIIADF--PE--GRIEEFIDGEPLTTKQ-----LQLT---HICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             ----TTSSCCEEEEE--TT--EEEEECCCSEECCTGG-----GGSH---HHHHHHHHHHHHHHTHHH
T ss_pred             ----cCCCCCEEEEc--CC--CEEEEEeCCccCChhh-----cCCH---HHHHHHHHHHHHHhcCch
Confidence                12245555533  22  6889999986553211     1111   256788888999997543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=80.87  E-value=6.2  Score=28.58  Aligned_cols=97  Identities=13%  Similarity=0.124  Sum_probs=52.7

Q ss_pred             eecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCcee
Q psy13106         36 LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQ  115 (177)
Q Consensus        36 ~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~  115 (177)
                      .++ |....+|+.... .++.+++|......  .....+..|..++..+....                   +   .++.
T Consensus        33 ~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g-------------------~---~vp~   86 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDE-DRRRFVVKFYRPER--WTADQILEEHQFALQLVNDE-------------------V---PVAA   86 (328)
T ss_dssp             EEC-CSSSEEEEECCT-TCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTT-------------------C---SBCC
T ss_pred             eec-CcccceEEEEcC-CCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcC-------------------C---eecc
Confidence            455 667788876542 35578999875321  12345666777776644210                   1   1122


Q ss_pred             eEEE-----EecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        116 LIET-----FEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       116 ~~~~-----~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                      ++..     ....+..+++|++++|..+..       .+..    .+.++...|.-||.
T Consensus        87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~-------~~~~----~~~~~g~~La~lH~  134 (328)
T 1zyl_A           87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEA-------DNID----QMEAVGRYLGRMHQ  134 (328)
T ss_dssp             CCCBTTBSCEEETTEEEEEEECCCCEECCS-------SCHH----HHHHHHHHHHHHHH
T ss_pred             eeecCCcEEEEECCEEEEEEEecCCCCCCC-------CCHH----HHHHHHHHHHHHHH
Confidence            2111     112456788999998755431       1221    24556666666775

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=80.08  E-value=16  Score=27.03  Aligned_cols=100  Identities=16%  Similarity=0.142  Sum_probs=54.3

Q ss_pred             EEeeecccceeEEEEEEEecC--------CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         33 LKELLGTGAFSEVRLAESREN--------GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~--------~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      -.+.++.|....+|++.....        +..+.+|+.....  ........|..++..+..                  
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~------------------   96 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSK------------------   96 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHH------------------
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHh------------------
Confidence            355778888889998876531        2678888754321  111123567777776432                  


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE  169 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~  169 (177)
                           +.-.++++..+  ++  +++|+|++|..+...-     +..   ...+.+++..|+-||.
T Consensus        97 -----~g~~P~~~~~~--~~--~~v~e~i~G~~l~~~~-----~~~---~~~~~~~a~~La~lH~  144 (369)
T 3c5i_A           97 -----YKIAPQLLNTF--NG--GRIEEWLYGDPLRIDD-----LKN---PTILIGIANVLGKFHT  144 (369)
T ss_dssp             -----TTSSCCEEEEE--TT--EEEEECCCSEECCGGG-----GGC---HHHHHHHHHHHHHHHT
T ss_pred             -----cCCCCceEEec--CC--cEEEEEecCCcCChhh-----cCC---hHHHHHHHHHHHHHHc
Confidence                 11145566543  22  6899999886543210     111   1245677778888885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-36
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-31
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-30
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-30
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-30
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-30
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-29
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-29
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-28
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-28
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-28
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-27
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-27
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-27
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-26
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-26
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-25
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-25
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-23
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-22
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-22
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-22
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-22
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-22
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-21
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-21
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-21
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-21
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-21
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-20
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-20
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-20
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-20
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-19
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-19
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-19
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-18
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-15
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-14
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-14
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-08

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  126 bits (317), Expect = 2e-36
 Identities = 70/147 (47%), Positives = 92/147 (62%), Gaps = 24/147 (16%)

Query: 23  KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLR 82
           +   I + Y  +++LGTGAFSEV LAE +    + A+K I KKAL+GKE S+ENEI VL 
Sbjct: 3   QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 62

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
           +                        + HPNIV L + +E    +YL+M+LV+GGELFDRI
Sbjct: 63  K------------------------IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
           VEKG YTE+DAS LI QVL+AV Y+H+
Sbjct: 99  VEKGFYTERDASRLIFQVLDAVKYLHD 125

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  114 bits (287), Expect = 1e-31
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 26/154 (16%)

Query: 21  EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV 80
           E+K  S+ + Y + E LG+GAF  V     +  G +F  K I+      K  +++NEI +
Sbjct: 21  EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY-TVKNEISI 79

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           + +                        L HP ++ L + FEDK+++ L++E ++GGELFD
Sbjct: 80  MNQ------------------------LHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 115

Query: 141 RIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYL 173
           RI  +    +E +    +RQ  E + +MHE   +
Sbjct: 116 RIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 149

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  111 bits (278), Expect = 2e-30
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 26/154 (16%)

Query: 21  EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKV 80
           EIK   + + Y + E LGTGAF  V     R  G  FA K +       KE  +  EI+ 
Sbjct: 18  EIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQT 76

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           +                          L HP +V L + FED +++ ++ E ++GGELF+
Sbjct: 77  MSV------------------------LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 112

Query: 141 RIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYL 173
           ++ ++    +E +A   +RQV + + +MHE  Y+
Sbjct: 113 KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 146

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 4e-30
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 24/146 (16%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           ++ +     LG G    V     + +G + A K+I  +      + +  E++VL      
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE---- 60

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                                  P IV     F    ++ + ME + GG L   + + G 
Sbjct: 61  --------------------CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 100

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
             E+    +   V++ + Y+ E   +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKI 126

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  109 bits (272), Expect = 4e-30
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 31/152 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDK--------KALKGKEDSLENEIKV 80
           E Y  KE+LG G  S VR    +     +AVKIID         + ++   ++   E+ +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           LR+ S                        HPNI+QL +T+E     +LV +L+  GELFD
Sbjct: 63  LRKVSG-----------------------HPNIIQLKDTYETNTFFFLVFDLMKKGELFD 99

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            + EK + +EK+   ++R +LE +  +H+   
Sbjct: 100 YLTEKVTLSEKETRKIMRALLEVICALHKLNI 131

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 4e-30
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 24/145 (16%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E + L + LG GA+ EV+LA +R      AVKI+D K      ++++ EI + +      
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM----- 59

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              L H N+V+      + +  YL +E  +GGELFDRI      
Sbjct: 60  -------------------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100

Query: 149 TEKDASMLIRQVLEAVDYMHEARYL 173
            E DA     Q++  V Y+H     
Sbjct: 101 PEPDAQRFFHQLMAGVVYLHGIGIT 125

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 3e-29
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQ 86
           E +   ++LG G+FS V LA        +A+KI++K+ +  + K   +  E  V+ R   
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR--- 64

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HP  V+L  TF+D  K+Y  +     GEL   I + G
Sbjct: 65  ---------------------LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
           S+ E        +++ A++Y+H    +
Sbjct: 104 SFDETCTRFYTAEIVSALEYLHGKGII 130

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 8e-29
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 26/146 (17%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
            ++KY   E +G GA   V  A     G   A++ ++ +    KE  + NEI V+R    
Sbjct: 18  PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRE--- 73

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  +PNIV  ++++    ++++VME + GG L D +V + 
Sbjct: 74  ---------------------NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTET 111

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
              E   + + R+ L+A++++H  + 
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQV 137

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 1e-28
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 29/149 (19%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-----SLENEIKV 80
           ++++ Y   E LG+G F+ V+    +  G  +A K I K+  K          +E E+ +
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 81  LRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFD 140
           L+                         + HPN++ L E +E+K  V L++ELV GGELFD
Sbjct: 67  LKE------------------------IQHPNVITLHEVYENKTDVILILELVAGGELFD 102

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
            + EK S TE++A+  ++Q+L  V Y+H 
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHS 131

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (263), Expect = 2e-28
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 26/148 (17%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFS 85
           E+ +     +G G+F  V  A    N  + A+K +     +  E    +  E++ L++  
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-- 71

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                 L HPN +Q    +  +H  +LVME   G       V K
Sbjct: 72  ----------------------LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK 109

Query: 146 GSYTEKDASMLIRQVLEAVDYMHEARYL 173
               E + + +    L+ + Y+H    +
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMI 137

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  103 bits (257), Expect = 6e-28
 Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 30/153 (19%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRF 84
           + ++Y L E+LG G  SEV LA         AVK++     +          E +     
Sbjct: 5   LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA-- 62

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK----VYLVMELVTGGELFD 140
                                  L HP IV + +T E +       Y+VME V G  L D
Sbjct: 63  ----------------------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 100

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            +  +G  T K A  +I    +A+++ H+   +
Sbjct: 101 IVHTEGPMTPKRAIEVIADACQALNFSHQNGII 133

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 3e-27
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 26/147 (17%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           E+ + +   LG GAF +V  A+++E   + A K+ID K+ +  ED    EI +L      
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILAS---- 65

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-G 146
                                 HPNIV+L++ F  ++ +++++E   GG +   ++E   
Sbjct: 66  --------------------CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 105

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
             TE    ++ +Q L+A++Y+H+ + +
Sbjct: 106 PLTESQIQVVCKQTLDALNYLHDNKII 132

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 3e-27
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL--KGKEDSLENEIKVLRRFSQ 86
           E + +   LG G F  V LA  +++  + A+K++ K  L   G E  L  E+++      
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--- 62

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                L HPNI++L   F D  +VYL++E    G ++  + +  
Sbjct: 63  ---------------------LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 101

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
            + E+  +  I ++  A+ Y H  R +
Sbjct: 102 KFDEQRTATYITELANALSYCHSKRVI 128

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 4e-27
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 25/143 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           E +IL ++LG G+F +V LAE ++    FA+K + K  +   +D      E +VL     
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL--- 58

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +  +  TF+ K  ++ VME + GG+L   I    
Sbjct: 59  --------------------AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH 98

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            +    A+    +++  + ++H 
Sbjct: 99  KFDLSRATFYAAEIILGLQFLHS 121

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-26
 Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 36/159 (22%)

Query: 21  EIKGPSIEEKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIK 79
           +IK  +I + Y +  ++LG G   +V    ++     FA+K++              E++
Sbjct: 3   QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVE 56

Query: 80  VLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTG 135
           +  R SQ                        P+IV++++ +E+    +  + +VME + G
Sbjct: 57  LHWRASQ-----------------------CPHIVRIVDVYENLYAGRKCLLIVMECLDG 93

Query: 136 GELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARY 172
           GELF RI ++G  ++TE++AS +++ + EA+ Y+H    
Sbjct: 94  GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 132

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 27/144 (18%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           + EKY++ E LG G F  V       +   +  K +  K     +  ++ EI +L     
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNI--- 57

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  H NI+ L E+FE   ++ ++ E ++G ++F+RI    
Sbjct: 58  ---------------------ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSA 96

Query: 147 -SYTEKDASMLIRQVLEAVDYMHE 169
               E++    + QV EA+ ++H 
Sbjct: 97  FELNEREIVSYVHQVCEALQFLHS 120

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 97.9 bits (243), Expect = 2e-25
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 23/143 (16%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQ 86
             + +  ++G G F EV      + G M+A+K +DKK +K K  E    NE  +L   S 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                   P IV +   F    K+  +++L+ GG+L   + + G
Sbjct: 64  ---------------------GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG 102

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
            ++E D      +++  +++MH 
Sbjct: 103 VFSEADMRFYAAEIILGLEHMHN 125

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 3e-25
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 31/155 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
           E Y +   +GTG++   +    + +G +   K +D  ++   E   L +E+ +LR     
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR----- 58

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH--KVYLVMELVTGGELFDRIV-- 143
                               L HPNIV+  +   D+    +Y+VME   GG+L   I   
Sbjct: 59  -------------------ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG 99

Query: 144 --EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKP 176
             E+    E+    ++ Q+  A+   H        
Sbjct: 100 TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 134

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 9e-24
 Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 28/153 (18%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED-----SLENEIKVL 81
           +E +Y +  LLG+G F  V       +    A+K ++K  +    +      +  E+ +L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGG-ELFD 140
           ++ S                           +++L++ FE      L++E      +LFD
Sbjct: 62  KKVSSG----------------------FSGVIRLLDWFERPDSFVLILERPEPVQDLFD 99

Query: 141 RIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            I E+G+  E+ A     QVLEAV + H    L
Sbjct: 100 FITERGALQEELARSFFWQVLEAVRHCHNCGVL 132

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 4e-23
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 46/168 (27%)

Query: 29  EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
            +    + LG GAF +V  A +      +     AVK++   A   + ++L +E+KVL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                     H NIV L+          ++ E    G+L + + 
Sbjct: 83  LGN-----------------------HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

Query: 144 EKGS------------------YTEKDASMLIRQVLEAVDYMHEARYL 173
            K                       +D      QV + + ++     +
Sbjct: 120 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 7e-23
 Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 30/152 (19%)

Query: 24  GPSIEEKYI-LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVL 81
           G S + +++     +G G+F  V      E     A   +  + L K +    + E ++L
Sbjct: 3   GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGE 137
           +                         L HPNIV+  +++E     K  + LV EL+T G 
Sbjct: 63  KG------------------------LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGT 98

Query: 138 LFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           L   +        K      RQ+L+ + ++H 
Sbjct: 99  LKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 130

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 1e-22
 Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 29/149 (19%)

Query: 29  EKYILKEL-LGTGAFSEVRLAESRE--NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           +  ++ ++ LG G F  VR    R        A+K++ +   K   + +  E +++    
Sbjct: 8   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMH--- 64

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                +L +P IV+LI   +    + LVME+  GG L   +V K
Sbjct: 65  ---------------------QLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGK 102

Query: 146 -GSYTEKDASMLIRQVLEAVDYMHEARYL 173
                  + + L+ QV   + Y+ E  ++
Sbjct: 103 REEIPVSNVAELLHQVSMGMKYLEEKNFV 131

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 89.1 bits (220), Expect = 2e-22
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 33/157 (21%)

Query: 15  KDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSL 74
            D + + ++  + ++ Y L   LG G +SEV  A +  N     VKI+       K+  +
Sbjct: 22  WDYESHVVEWGNQDD-YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKI 76

Query: 75  ENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--KHKVYLVMEL 132
           + EIK+L                             PNI+ L +  +D       LV E 
Sbjct: 77  KREIKILENLRG-----------------------GPNIITLADIVKDPVSRTPALVFEH 113

Query: 133 VTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
           V   +         + T+ D    + ++L+A+DY H 
Sbjct: 114 VNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHS 147

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 3e-22
 Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 32/148 (21%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           ++  L + +G G F +V L      G   AVK I   A      +   E  V+ +     
Sbjct: 7   KELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDA---TAQAFLAEASVMTQ----- 56

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETF-EDKHKVYLVMELVTGGELFDRIVEKG- 146
                              L H N+VQL+    E+K  +Y+V E +  G L D +  +G 
Sbjct: 57  -------------------LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 97

Query: 147 -SYTEKDASMLIRQVLEAVDYMHEARYL 173
                         V EA++Y+    ++
Sbjct: 98  SVLGGDCLLKFSLDVCEAMEYLEGNNFV 125

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 4e-22
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 28/139 (20%)

Query: 35  ELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLE----NEIKVLRRFSQSVHN 90
           + LG G F+ V  A  +    + A+K I        +D +      EIK+L+        
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE------- 56

Query: 91  RLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTE 150
                            L+HPNI+ L++ F  K  + LV + +               T 
Sbjct: 57  -----------------LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP 99

Query: 151 KDASMLIRQVLEAVDYMHE 169
                 +   L+ ++Y+H+
Sbjct: 100 SHIKAYMLMTLQGLEYLHQ 118

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.0 bits (217), Expect = 5e-22
 Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +  +Y L   +G+G+F ++ L      G   A+K+   K    K   L  E K+ +    
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQG 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                     I  +     +     +VMEL+             
Sbjct: 62  -----------------------GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR 98

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
            ++ K   +L  Q++  ++Y+H   ++
Sbjct: 99  KFSLKTVLLLADQMISRIEYIHSKNFI 125

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (216), Expect = 6e-22
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 30/142 (21%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFSQS 87
            +  + + +G+G+F  V   +   +    AVK+++  A   ++  + +NE+ VLR+    
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRK---- 60

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKG 146
                                 H NI+  +  +    ++ +V +   G  L+  + + + 
Sbjct: 61  --------------------TRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIET 99

Query: 147 SYTEKDASMLIRQVLEAVDYMH 168
            +       + RQ  + +DY+H
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLH 121

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 9e-22
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 51/173 (29%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENG-----TMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           E     ++LG+GAF +V  A +            AVK++ +KA   + ++L +E+K++ +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                     H NIV L+        +YL+ E    G+L + + 
Sbjct: 97  LGS-----------------------HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 133

Query: 144 EK-----------------------GSYTEKDASMLIRQVLEAVDYMHEARYL 173
            K                          T +D      QV + ++++     +
Sbjct: 134 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 186

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-21
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 28/146 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           +     + LGTG F  V+  + R      A+K+I + ++   ED    E KV+       
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS--EDEFIEEAKVMMN----- 55

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI-VEKGS 147
                              L+H  +VQL      +  ++++ E +  G L + +   +  
Sbjct: 56  -------------------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR 96

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
           +  +    + + V EA++Y+   ++L
Sbjct: 97  FQTQQLLEMCKDVCEAMEYLESKQFL 122

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.9 bits (212), Expect = 4e-21
 Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 26/147 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
           + + +   LGTG+F  V L  SR NG  +A+K++ K+ +   +      +E  +L     
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI--- 60

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                +THP I+++  TF+D  +++++M+ + GGELF  + +  
Sbjct: 61  ---------------------VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ 99

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
            +    A     +V  A++Y+H    +
Sbjct: 100 RFPNPVAKFYAAEVCLALEYLHSKDII 126

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 4e-21
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 26/146 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKED--SLENEIKVLRRFSQ 86
             +   +LLG G F +V L   +  G  +A+KI+ K+ +  K++      E +VL+    
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN--- 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                  HP +  L   F+   ++  VME   GGELF  +  + 
Sbjct: 62  ---------------------TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER 100

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARY 172
            +TE+ A     +++ A++Y+H    
Sbjct: 101 VFTEERARFYGAEIVSALEYLHSRDV 126

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 5e-21
 Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 29/151 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAE---SRENGTMFAVKIIDKKALKGKEDSLE---NEIKVLR 82
           E + L ++LGTGA+ +V L       + G ++A+K++ K  +  K  + E    E +VL 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
              Q                        P +V L   F+ + K++L+++ + GGELF  +
Sbjct: 84  HIRQ-----------------------SPFLVTLHYAFQTETKLHLILDYINGGELFTHL 120

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            ++  +TE +  + + +++ A++++H+   +
Sbjct: 121 SQRERFTEHEVQIYVGEIVLALEHLHKLGII 151

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 84.6 bits (208), Expect = 7e-21
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 26/146 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQS 87
           EKY   E +G G +  V  A++   G  FA+K I  +   +G   +   EI +L+     
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKE---- 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L H NIV+L +    K ++ LV E +         V +G 
Sbjct: 57  --------------------LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG 96

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
                A   + Q+L  + Y H+ R L
Sbjct: 97  LESVTAKSFLLQLLNGIAYCHDRRVL 122

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 1e-20
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 33/150 (22%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGT--MFAVKIIDKKALKGK-EDSLENEIKVLR 82
           ++E+K      LG+G F  V+    +        AVKI+  +A     +D L  E  V++
Sbjct: 9   TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
           +                        L +P IV++I   E +    LVME+   G L   +
Sbjct: 64  Q------------------------LDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYL 98

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            +     +K+   L+ QV   + Y+ E+ +
Sbjct: 99  QQNRHVKDKNIIELVHQVSMGMKYLEESNF 128

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 1e-20
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 33/153 (21%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFS 85
           +   Y   + +G+GA+  V  A     G   A+K + +             E+++L+   
Sbjct: 16  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLK--- 72

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHK------VYLVMELVTGGELF 139
                                 + H N++ L++ F            YLVM  +  G   
Sbjct: 73  ---------------------HMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDL 109

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            ++++     E     L+ Q+L+ + Y+H A  
Sbjct: 110 GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 142

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.6 bits (206), Expect = 2e-20
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 28/147 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
               +K  LG G + EV     ++     AVK + +  ++ +E     E  V++      
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMK------ 68

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                              + HPN+VQL+     +   Y++ E +T G L D + E    
Sbjct: 69  ------------------EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 110

Query: 149 --TEKDASMLIRQVLEAVDYMHEARYL 173
             +      +  Q+  A++Y+ +  ++
Sbjct: 111 EVSAVVLLYMATQISSAMEYLEKKNFI 137

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-20
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 30/147 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E   L E LG G F EV +       T  AVK + + ++    D+   E  +++      
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM--SPDAFLAEANLMK------ 63

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSY 148
                             +L H  +V+L      +  +Y++ E +  G L D +      
Sbjct: 64  ------------------QLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGI 104

Query: 149 --TEKDASMLIRQVLEAVDYMHEARYL 173
             T      +  Q+ E + ++ E  Y+
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYI 131

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (202), Expect = 6e-20
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 25/146 (17%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQS 87
           +KY   E +G G +  V  A++RE   + A+K +      +G   S   EI +L+     
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE---- 57

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS 147
                               L H NIV+L +      K+ LV E              G 
Sbjct: 58  --------------------LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARYL 173
              +     + Q+L+ + + H    L
Sbjct: 98  LDPEIVKSFLFQLLKGLGFCHSRNVL 123

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.1 bits (202), Expect = 7e-20
 Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 28/149 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
               +++++G G F EV     +  G      A+K +     + +     +E  ++ +  
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-- 83

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                   HPN++ L         V ++ E +  G L   + + 
Sbjct: 84  ----------------------FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN 121

Query: 146 -GSYTEKDASMLIRQVLEAVDYMHEARYL 173
            G +T      ++R +   + Y+ +  Y+
Sbjct: 122 DGQFTVIQLVGMLRGIAAGMKYLADMNYV 150

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 8e-20
 Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +  +Y     +G GA+  V  A    N    A+K I     +        EIK+L     
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL---- 61

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIE-----TFEDKHKVYLVMELVTGGELFDR 141
                               R  H NI+ + +     T E    VYLV  L+  G    +
Sbjct: 62  --------------------RFRHENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYK 99

Query: 142 IVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
           +++    +       + Q+L  + Y+H A  L
Sbjct: 100 LLKTQHLSNDHICYFLYQILRGLKYIHSANVL 131

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 1e-19
 Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 33/147 (22%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           I    +L+E +G G F EV     +  G   AVKI   +  + +    E EI        
Sbjct: 1   IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSR--EERSWFREAEIYQTVM--- 53

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRI 142
                                L H NI+  I      +    +++LV +    G LFD +
Sbjct: 54  ---------------------LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92

Query: 143 VEKGSYTEKDASMLIRQVLEAVDYMHE 169
             + + T +    L       + ++H 
Sbjct: 93  -NRYTVTVEGMIKLALSTASGLAHLHM 118

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 2e-19
 Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 38/155 (24%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQS 87
           E  Y   +++G G+F  V  A+  ++G + A+K + +      +     E++++R     
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMR----- 68

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVMELVTGG---EL 138
                              +L H NIV+L   F      +D+  + LV++ V        
Sbjct: 69  -------------------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
                 K +       + + Q+  ++ Y+H     
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.7 bits (198), Expect = 2e-19
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 46/168 (27%)

Query: 29  EKYILKELLGTGAFSEVRLAESR-------ENGTMFAVKIIDKKALKGKEDSLENEIKVL 81
           ++ +L + LG GAF +V LAE+           T  AVK++   A +     L +E++++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
           +   +                       H NI+ L+        +Y+++E  + G L + 
Sbjct: 73  KMIGK-----------------------HKNIINLLGACTQDGPLYVIVEYASKGNLREY 109

Query: 142 IVEKGS----------------YTEKDASMLIRQVLEAVDYMHEARYL 173
           +  +                   + KD      QV   ++Y+   + +
Sbjct: 110 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI 157

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 3e-19
 Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRE---NGTMFAVKIIDKKALKGKE--DSLENEIKVLR 82
           E+   L E LG G+F  VR  E           AVK +    L   E  D    E+  + 
Sbjct: 7   EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66

Query: 83  RFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRI 142
                                    L H N+++L         + +V EL   G L DR+
Sbjct: 67  S------------------------LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 101

Query: 143 VEK-GSYTEKDASMLIRQVLEAVDYMHEARYL 173
            +  G +     S    QV E + Y+   R++
Sbjct: 102 RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 28/145 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
            +    + +G+G F  V L     N    A+K I + A+   E+    E +V+ +     
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMK----- 56

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GS 147
                              L+HP +VQL     ++  + LV E +  G L D +  + G 
Sbjct: 57  -------------------LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL 97

Query: 148 YTEKDASMLIRQVLEAVDYMHEARY 172
           +  +    +   V E + Y+ EA  
Sbjct: 98  FAAETLLGMCLDVCEGMAYLEEACV 122

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 3e-19
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 29/149 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFS 85
           E+  L   +G G F +V               A+K           +    E   +R+  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-- 64

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK 145
                                   HP+IV+LI    +   V+++MEL T GEL   +  +
Sbjct: 65  ----------------------FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 101

Query: 146 -GSYTEKDASMLIRQVLEAVDYMHEARYL 173
             S       +   Q+  A+ Y+   R++
Sbjct: 102 KYSLDLASLILYAYQLSTALAYLESKRFV 130

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 5e-19
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQS 87
            KY     +G G F EV  A  R+ G   A+K +  +  K G   +   EIK+L+     
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ----- 64

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFED--------KHKVYLVMELVTGGELF 139
                               L H N+V LIE            K  +YLV +        
Sbjct: 65  -------------------LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG 105

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHE 169
                   +T  +   +++ +L  + Y+H 
Sbjct: 106 LLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 135

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.8 bits (196), Expect = 8e-19
 Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 27/169 (15%)

Query: 7   KDSAKKLKKDGKDNEIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKA 66
             + +   K  +        ++ ++   + LGTG+F  V L + +E+G  +A+KI+DK+ 
Sbjct: 20  AKAKEDFLKKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78

Query: 67  LKGKED--SLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKH 124
           +   +      NE ++L+                         +  P +V+L  +F+D  
Sbjct: 79  VVKLKQIEHTLNEKRILQA------------------------VNFPFLVKLEFSFKDNS 114

Query: 125 KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
            +Y+VME V GGE+F  +   G ++E  A     Q++   +Y+H    +
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 8e-19
 Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 33/153 (21%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRFS 85
           + E+Y     +G+GA+  V  A   + G   AVK + +             E+++L+   
Sbjct: 16  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK--- 72

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFE------DKHKVYLVMELVTGGELF 139
                                 + H N++ L++ F       + + VYLV  L+  G   
Sbjct: 73  ---------------------HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADL 109

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
           + IV+    T+     LI Q+L  + Y+H A  
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 78.7 bits (193), Expect = 1e-18
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 26/147 (17%)

Query: 27  IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQ 86
           +   Y +   +G G+F  +    +  N    A+K   +++       L +E +  +  + 
Sbjct: 3   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAG 59

Query: 87  SVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG 146
                                     I  +    ++     LV++L+         +   
Sbjct: 60  -----------------------CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR 96

Query: 147 SYTEKDASMLIRQVLEAVDYMHEARYL 173
            ++ K  +M  +Q+L  V  +HE   +
Sbjct: 97  KFSVKTVAMAAKQMLARVQSIHEKSLV 123

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 2e-18
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 42/168 (25%)

Query: 25  PSIE-EKYILKELLGTGAFSEVRLAESRENGTMF--AVKIIDKKALKGKEDSLENEIKVL 81
           P ++      ++++G G F +V  A  +++G     A+K + + A K        E++VL
Sbjct: 5   PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 64

Query: 82  RRFSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDR 141
            +                          HPNI+ L+   E +  +YL +E    G L D 
Sbjct: 65  CKLGH-----------------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 101

Query: 142 IVEK----------------GSYTEKDASMLIRQVLEAVDYMHEARYL 173
           + +                  + + +        V   +DY+ + +++
Sbjct: 102 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI 149

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 3e-18
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 26/143 (18%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFSQS 87
           E +   E +G G +  V  A ++  G + A+K I      +G   +   EI +L+     
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK----- 56

Query: 88  VHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELV-TGGELFDRIVEKG 146
                               L HPNIV+L++    ++K+YLV E +    + F       
Sbjct: 57  -------------------ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT 97

Query: 147 SYTEKDASMLIRQVLEAVDYMHE 169
                     + Q+L+ + + H 
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHS 120

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 8e-17
 Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 29/154 (18%)

Query: 28  EEKYILKELLGTGAFSEVRLAESREN-GTMFAVKIIDKKAL-KGKEDSLENEIKVLRRFS 85
           +++Y     +G GA+ +V  A   +N G   A+K +  +   +G   S   E+ VLR   
Sbjct: 6   DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 65

Query: 86  QSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF-----EDKHKVYLVMELVTGGEL-F 139
                                   HPN+V+L +       + + K+ LV E V      +
Sbjct: 66  ---------------------TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 104

Query: 140 DRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL 173
              V +     +    ++ Q+L  +D++H  R +
Sbjct: 105 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVV 138

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 1e-16
 Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 39/160 (24%)

Query: 29  EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           EK  +   LG G+F  V    ++     E  T  A+K +++ A   +     NE  V++ 
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
           F+                          ++V+L+          ++MEL+T G+L   + 
Sbjct: 80  FN------------------------CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 115

Query: 144 EKGS----------YTEKDASMLIRQVLEAVDYMHEARYL 173
                          +      +  ++ + + Y++  +++
Sbjct: 116 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV 155

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (178), Expect = 2e-16
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 34/154 (22%)

Query: 26  SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKE-DSLENEIKVLRRF 84
           ++ ++Y   + +G+GA   V  A         A+K + +             E+ +++  
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-- 71

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETF------EDKHKVYLVMELVTGGEL 138
                                  + H NI+ L+  F      E+   VYLVMEL+     
Sbjct: 72  ----------------------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 109

Query: 139 FDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARY 172
                 +     +  S L+ Q+L  + ++H A  
Sbjct: 110 QVI---QMELDHERMSYLLYQMLCGIKHLHSAGI 140

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 4e-16
 Identities = 23/149 (15%), Positives = 50/149 (33%), Gaps = 29/149 (19%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENG----TMFAVKIIDKKALKGKEDSLENEIKVLRRF 84
                ++++G G F EV     + +        A+K +     + +      E  ++ +F
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 85  SQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE 144
           S                        H NI++L         + ++ E +  G L   + E
Sbjct: 67  S------------------------HHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE 102

Query: 145 K-GSYTEKDASMLIRQVLEAVDYMHEARY 172
           K G ++      ++R +   + Y+    Y
Sbjct: 103 KDGEFSVLQLVGMLRGIAAGMKYLANMNY 131

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.4 bits (174), Expect = 6e-16
 Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 53/174 (30%)

Query: 29  EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
                   +G GAF  V  A +      E  TM AVK++ ++A    +   + E  ++  
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                     +PNIV+L+        + L+ E +  G+L + + 
Sbjct: 73  ------------------------FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR 108

Query: 144 EKGSY------------------------TEKDASMLIRQVLEAVDYMHEARYL 173
               +                        +  +   + RQV   + Y+ E +++
Sbjct: 109 SMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV 162

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 1e-15
 Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 29  EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSV 88
           E   L+  LG G F EV +       T  A+K +    +    ++   E +V++      
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM--SPEAFLQEAQVMK------ 67

Query: 89  HNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGS- 147
                             +L H  +VQL     ++  +Y+V E ++ G L D +  +   
Sbjct: 68  ------------------KLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGK 108

Query: 148 -YTEKDASMLIRQVLEAVDYMHEARYL 173
                    +  Q+   + Y+    Y+
Sbjct: 109 YLRLPQLVDMAAQIASGMAYVERMNYV 135

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 2e-15
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 45/167 (26%)

Query: 29  EKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRR 83
           ++  L + LG GAF +V  A++            AVK++ + A   +  +L +E+K+L  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIE-TFEDKHKVYLVMELVTGGELFDRI 142
                                     H N+V L+    +    + +++E    G L   +
Sbjct: 73  IGH-----------------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 109

Query: 143 VEKGSY----------------TEKDASMLIRQVLEAVDYMHEARYL 173
             K +                 T +       QV + ++++   + +
Sbjct: 110 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 156

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (170), Expect = 3e-15
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 20/147 (13%)

Query: 30  KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
           +YIL   LG G FS V LA+   N T  A+KI+     K   ++ E+EIK+L+R      
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRV----- 66

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVT-----GGELFDRIVE 144
                   N++++  ++ +   +I++L++ F  K    + + +V            +  E
Sbjct: 67  --------NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 118

Query: 145 KGSYTEKDASMLIRQVLEAVDYMHEAR 171
                      + +Q+L  +DYMH   
Sbjct: 119 HRGIPLIYVKQISKQLLLGLDYMHRRC 145

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 1e-14
 Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 28/149 (18%)

Query: 28  EEKYILKELLGTGAFSEVRLAESRENGTMF----AVKIIDKKALKGKEDSLENEIKVLRR 83
           E ++   ++LG+GAF  V        G       A+K + +         + +E  V+  
Sbjct: 8   ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 67

Query: 84  FSQSVHNRLDETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV 143
                                   + +P++ +L+          +   +  G  L     
Sbjct: 68  ------------------------VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE 103

Query: 144 EKGSYTEKDASMLIRQVLEAVDYMHEARY 172
            K +   +       Q+ + ++Y+ + R 
Sbjct: 104 HKDNIGSQYLLNWCVQIAKGMNYLEDRRL 132

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 29/145 (20%)

Query: 33  LKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVH 89
             E++G G F  V      +N       AVK +++    G+      E  +++       
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK------- 83

Query: 90  NRLDETNDNNSNDKDKERLTHPNIVQLIET-FEDKHKVYLVMELVTGGELFD-RIVEKGS 147
                              +HPN++ L+      +    +V+  +  G+L +    E  +
Sbjct: 84  -----------------DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 126

Query: 148 YTEKDASMLIRQVLEAVDYMHEARY 172
            T KD      QV + + ++   ++
Sbjct: 127 PTVKDLIGFGLQVAKGMKFLASKKF 151

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.2 bits (114), Expect = 5e-08
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 19/137 (13%)

Query: 33  LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRL 92
           + +L+G G  S V    S E      VK   K      +   E        FS       
Sbjct: 4   IGKLMGEGKESAVFNCYS-EKFGECVVKFH-KVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 93  DETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKD 152
                         +L    + ++     +     ++MEL+   EL+           ++
Sbjct: 62  RNEFRALQ------KLQGLAVPKVYAWEGN----AVLMELIDAKELYR-------VRVEN 104

Query: 153 ASMLIRQVLEAVDYMHE 169
              ++  +LE V   + 
Sbjct: 105 PDEVLDMILEEVAKFYH 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.98
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.95
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.95
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.95
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.95
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.94
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.94
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.94
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.94
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.94
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.93
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.93
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.92
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.91
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.84
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.77
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.51
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.91
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.2
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	86.87

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-33  Score=202.99  Aligned_cols=127  Identities=32%  Similarity=0.479  Sum_probs=113.9

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.++|++.+.||+|+||.||+|.++.+++.||||++...........+.+|+.+++.                       
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~-----------------------   59 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----------------------   59 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHT-----------------------
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHh-----------------------
Confidence            356899999999999999999999999999999999765544445678899999998                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+++.+|+|||||++|+|.+++..+..+++..++.++.||+.||+|||++||+||||
T Consensus        60 -l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDi  129 (271)
T d1nvra_          60 -LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI  129 (271)
T ss_dssp             -CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -CCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcc
Confidence             8999999999999999999999999999999999988888999999999999999999999999999997

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-32  Score=203.33  Aligned_cols=129  Identities=54%  Similarity=0.850  Sum_probs=113.5

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +.+.+.|.+.+.||+|+||+||+|.++.+++.||||++...........+.+|+.++..                     
T Consensus         5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~---------------------   63 (307)
T d1a06a_           5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK---------------------   63 (307)
T ss_dssp             SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHT---------------------
T ss_pred             CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHh---------------------
Confidence            45677899999999999999999999999999999999876554455667889999988                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+++.+|+|||||+||+|.+++...+.+++..+..++.||+.||+|||++||+||||
T Consensus        64 ---l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDi  133 (307)
T d1a06a_          64 ---IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL  133 (307)
T ss_dssp             ---CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEe
Confidence               8999999999999999999999999999999999998888999999999999999999999999999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-32  Score=198.15  Aligned_cols=130  Identities=35%  Similarity=0.636  Sum_probs=118.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-----chhHHHHHHHHHhhcccccccccccccC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-----EDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ...+.++|.+.+.||+|+||.||+|.++.+++.||||++.+......     .+.+.+|+.+++.               
T Consensus         5 ~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~---------------   69 (293)
T d1jksa_           5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE---------------   69 (293)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHH---------------
T ss_pred             CCCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHh---------------
Confidence            34567899999999999999999999999999999999976543222     2567899999999               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++||||+++++++.+.+.+|+|||||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||
T Consensus        70 ---------l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDi  139 (293)
T d1jksa_          70 ---------IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL  139 (293)
T ss_dssp             ---------CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---------CCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeeccc
Confidence                     8999999999999999999999999999999999998888999999999999999999999999999997

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.2e-31  Score=194.13  Aligned_cols=126  Identities=27%  Similarity=0.518  Sum_probs=115.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|.+.+.||+|+||.||+|.++.+++.||+|++.+.....  ....+.+|+.+++.                      
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~----------------------   62 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----------------------   62 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT----------------------
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHh----------------------
Confidence            467999999999999999999999999999999997654322  23567889999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+++.+|+|||||++|+|.+++...+++++..++.++.||+.||+|||++||+||||
T Consensus        63 --l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDi  132 (263)
T d2j4za1          63 --LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI  132 (263)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             --cCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeee
Confidence              8999999999999999999999999999999999998888999999999999999999999999999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=195.66  Aligned_cols=126  Identities=29%  Similarity=0.527  Sum_probs=115.7

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|++.+.||+|+||+||+|.++.+++.||||++.+....  .....+.+|+.+++.                      
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~----------------------   64 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR----------------------   64 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH----------------------
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHH----------------------
Confidence            36799999999999999999999999999999999765432  233567899999998                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+++.+|+|||||++|+|.+++...+.+++..++.++.|++.||+|||++|||||||
T Consensus        65 --l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDi  134 (288)
T d1uu3a_          65 --LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL  134 (288)
T ss_dssp             --CCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             --cCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcC
Confidence              8999999999999999999999999999999999998889999999999999999999999999999997

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=198.36  Aligned_cols=126  Identities=25%  Similarity=0.447  Sum_probs=114.7

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|.+++.||+|+||.||+|.++.+++.||||+++....  ....+.+|+.+++.                      
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~--~~~~~~~Ei~il~~----------------------   57 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNI----------------------   57 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH--HHHHHHHHHHHHHH----------------------
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc--cHHHHHHHHHHHHh----------------------
Confidence            456789999999999999999999999999999999965432  23457789999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||++++++|.+++.+|+|||||+|++|.+++...+ .+++.+++.++.||+.||+|||++||+||||
T Consensus        58 --l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDl  128 (321)
T d1tkia_          58 --ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI  128 (321)
T ss_dssp             --SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --CCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence              899999999999999999999999999999999998665 6999999999999999999999999999997

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-31  Score=194.52  Aligned_cols=125  Identities=26%  Similarity=0.449  Sum_probs=113.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|.+.+.||+|+||.||+|.++.+++.||||++..... ...+.+.+|+.+++.                       
T Consensus        18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~-----------------------   73 (293)
T d1yhwa1          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRE-----------------------   73 (293)
T ss_dssp             TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHH-----------------------
T ss_pred             cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC-hHHHHHHHHHHHHHh-----------------------
Confidence            45689999999999999999999999999999999976542 234568899999998                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+++.+|+|||||++|+|.+++.. .++++..++.++.||+.||+|||++||+||||
T Consensus        74 -l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDi  142 (293)
T d1yhwa1          74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDI  142 (293)
T ss_dssp             -CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -CCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence             8999999999999999999999999999999998765 45999999999999999999999999999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=5.4e-31  Score=191.95  Aligned_cols=127  Identities=34%  Similarity=0.540  Sum_probs=114.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--------chhHHHHHHHHHhhcccccccccccccC
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--------EDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--------~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +.++|.+.+.||+|+||+||+|++..+++.||||++++......        ...+.+|+.++++               
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~---------------   65 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK---------------   65 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHH---------------
Confidence            35789999999999999999999999999999999976543221        1346778888888               


Q ss_pred             CCcccccccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106         99 NSNDKDKERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus        99 ~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                               ++ ||||+++++++.+++.+|+|||||++|+|.+++..++++++..++.++.||+.||+|||++||+||||
T Consensus        66 ---------l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDl  136 (277)
T d1phka_          66 ---------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDL  136 (277)
T ss_dssp             ---------HTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---------hcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence                     65 99999999999999999999999999999999998889999999999999999999999999999997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=198.64  Aligned_cols=128  Identities=20%  Similarity=0.303  Sum_probs=115.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|+++..........+.+|+.+++.                      
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~----------------------   60 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE----------------------   60 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGG----------------------
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHh----------------------
Confidence            3467899999999999999999999999999999999765433334567788888887                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~Dl  177 (177)
                        ++||||+++++++.+++.+|+|||||++|+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||
T Consensus        61 --l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDi  131 (322)
T d1s9ja_          61 --CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV  131 (322)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             --CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcccc
Confidence              89999999999999999999999999999999999988889999999999999999999997 59999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.5e-31  Score=192.19  Aligned_cols=125  Identities=28%  Similarity=0.531  Sum_probs=113.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.|++++.||+|+||.||+|.++.+++.||||++.... ......+.+|+.+++.                        
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~E~~il~~------------------------   65 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILAS------------------------   65 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS-SGGGGGTHHHHHHHHH------------------------
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHh------------------------
Confidence            457999999999999999999999999999999997543 2334678899999998                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++.+|+|||||++|+|.+++... .++++..++.++.||+.||.|||++||+||||
T Consensus        66 l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDi  136 (288)
T d2jfla1          66 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL  136 (288)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             CCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeec
Confidence            89999999999999999999999999999999987654 56999999999999999999999999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=6.1e-31  Score=197.37  Aligned_cols=130  Identities=32%  Similarity=0.567  Sum_probs=115.9

Q ss_pred             cCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         23 KGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        23 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+.+.++|.+++.||+|+||.||+|.++.+++.||||++..... .....+.+|+.+++.                   
T Consensus        20 ~~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~E~~il~~-------------------   79 (350)
T d1koaa2          20 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSV-------------------   79 (350)
T ss_dssp             BCSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH-HHHHHHHHHHHHHHH-------------------
T ss_pred             CCCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch-hhHHHHHHHHHHHHh-------------------
Confidence            344556789999999999999999999999999999999965432 233567889999998                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+.+.+|+|||||++|+|.+++. ..+.+++..++.++.||+.||+|||++|||||||
T Consensus        80 -----l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDi  150 (350)
T d1koaa2          80 -----LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL  150 (350)
T ss_dssp             -----TCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----CCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeee
Confidence                 899999999999999999999999999999999885 4456999999999999999999999999999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=5.5e-31  Score=197.76  Aligned_cols=132  Identities=33%  Similarity=0.554  Sum_probs=116.2

Q ss_pred             cccCcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         21 EIKGPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        21 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ......+.++|++++.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+++.                 
T Consensus        21 ~~~~~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~Ei~il~~-----------------   82 (352)
T d1koba_          21 EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQ-----------------   82 (352)
T ss_dssp             CCBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTT-----------------
T ss_pred             cCCCCCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch-hHHHHHHHHHHHHHh-----------------
Confidence            33444566789999999999999999999999999999999875432 223567789999988                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                             ++||||++++++|.+++.+|+|||||++|+|.+++...+ ++++.+++.++.||+.||+|||++|||||||
T Consensus        83 -------l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDi  153 (352)
T d1koba_          83 -------LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDI  153 (352)
T ss_dssp             -------CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -------CCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence                   899999999999999999999999999999999876554 6999999999999999999999999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=6.9e-31  Score=194.09  Aligned_cols=127  Identities=22%  Similarity=0.353  Sum_probs=113.9

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+.|...+.||+|+||.||+|.+..+++.||||++........  ...+.+|+.+++.                     
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~---------------------   71 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK---------------------   71 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTT---------------------
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHH---------------------
Confidence            34579999999999999999999999999999999976543222  2457889999988                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.+++.+|+|||||.+|+|..++...+++++..++.++.||+.||.|||++|||||||
T Consensus        72 ---l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDi  141 (309)
T d1u5ra_          72 ---LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV  141 (309)
T ss_dssp             ---CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             ---CCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCC
Confidence               8999999999999999999999999999999887777788999999999999999999999999999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=1.2e-30  Score=190.28  Aligned_cols=129  Identities=29%  Similarity=0.397  Sum_probs=114.6

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+.++|.+.+.||+|+||.||+|.+..+++.||||++........  ...+.+|+.+++.                   
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~-------------------   63 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-------------------   63 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHT-------------------
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh-------------------
Confidence            4567899999999999999999999999999999999976543322  2457889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++...+    .+|+|||||++++|.+++...+++++.+++.++.||+.||+|||++||+||||
T Consensus        64 -----~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDi  137 (277)
T d1o6ya_          64 -----LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV  137 (277)
T ss_dssp             -----CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -----cCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccc
Confidence                 89999999999987543    48999999999999999988888999999999999999999999999999997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-30  Score=193.67  Aligned_cols=126  Identities=26%  Similarity=0.483  Sum_probs=115.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.|.+++.||+|+||.||+|+++.+++.||||++.+....  .....+.+|+.+++.                      
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~----------------------   61 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN----------------------   61 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS----------------------
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh----------------------
Confidence            45799999999999999999999999999999999865432  233567889999988                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+.+.+|+|||||++|+|.+++...+.+++..++.++.||+.||+|||++|||||||
T Consensus        62 --l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDl  131 (337)
T d1o6la_          62 --TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  131 (337)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             --CCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCcccccc
Confidence              8999999999999999999999999999999999999889999999999999999999999999999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-30  Score=186.45  Aligned_cols=126  Identities=23%  Similarity=0.377  Sum_probs=110.9

Q ss_pred             ccce-EEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKY-ILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +++| ++.++||+|+||+||+|.+..+++.||+|.+....... ....+.+|+.+++.                      
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~----------------------   64 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG----------------------   64 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT----------------------
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh----------------------
Confidence            4455 78889999999999999999999999999997654322 23567889999988                      


Q ss_pred             ccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCC
Q psy13106        106 ERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR--YLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g--iiH~Dl  177 (177)
                        ++||||+++++++.+    +..+|++||||++|+|.+++.+...+++..++.++.||+.||+|||++|  |+||||
T Consensus        65 --l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDi  140 (270)
T d1t4ha_          65 --LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL  140 (270)
T ss_dssp             --CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCC
T ss_pred             --CCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCc
Confidence              899999999999864    4568999999999999999998888999999999999999999999999  999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=8.5e-30  Score=186.50  Aligned_cols=128  Identities=21%  Similarity=0.350  Sum_probs=114.4

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +....++|.+.+.||+|+||.||+|.+..+++.||||.++...  ...+.+.+|+.++..                    
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~--~~~~~~~~E~~il~~--------------------   69 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKE--------------------   69 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC--SCHHHHHHHHHHHHH--------------------
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc--chHHHHHHHHHHHHh--------------------
Confidence            3345568999999999999999999999999999999986433  234668899999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+++.++++||||++|+|.+++...  ..+++..+..++.||+.||+|||++||+||||
T Consensus        70 ----l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDl  141 (287)
T d1opja_          70 ----IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL  141 (287)
T ss_dssp             ----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ----CCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCcc
Confidence                89999999999999999999999999999999998754  45899999999999999999999999999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-29  Score=188.03  Aligned_cols=125  Identities=26%  Similarity=0.501  Sum_probs=110.8

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHH-hhcccccccccccccCCCccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLR-RFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.|.+.+.||+|+||+||+|.++.+++.||||++.+....  ........|..++. .                      
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~----------------------   59 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----------------------   59 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH----------------------
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHh----------------------
Confidence            5799999999999999999999999999999999764322  22234556665554 4                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+++.+|+|||||++|+|.+++.....+++..++.++.||+.||+|||++||+||||
T Consensus        60 --~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDi  129 (320)
T d1xjda_          60 --WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL  129 (320)
T ss_dssp             --TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             --CCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence              7999999999999999999999999999999999998888999999999999999999999999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1e-29  Score=188.28  Aligned_cols=125  Identities=27%  Similarity=0.555  Sum_probs=114.4

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc--ccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK--GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +.|.+++.||+|+||+||+|+++.+++.||||++.+....  .....+.+|+.+++.                       
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~-----------------------   60 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-----------------------   60 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-----------------------
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHh-----------------------
Confidence            5699999999999999999999999999999999765432  223567889999988                       


Q ss_pred             cCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++.+++.+|+|||||+|++|.+++.....+++..++.++.||+.||+|||++|||||||
T Consensus        61 -l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDi  130 (316)
T d1fota_          61 -VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL  130 (316)
T ss_dssp             -CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             -ccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEcccc
Confidence             8999999999999999999999999999999999998888999999999999999999999999999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.4e-29  Score=188.64  Aligned_cols=126  Identities=29%  Similarity=0.562  Sum_probs=115.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc--cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG--KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .++|.+++.||+|+||.||+|.++.+++.||||++.+.....  ....+.+|+.+++.                      
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~----------------------   97 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA----------------------   97 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT----------------------
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHH----------------------
Confidence            468999999999999999999999999999999997543322  23567789999888                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+...++++||++.+|+|.+++...+.+++..++.++.||+.||.|||++|||||||
T Consensus        98 --l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDI  167 (350)
T d1rdqe_          98 --VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL  167 (350)
T ss_dssp             --CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --cCCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcC
Confidence              8999999999999999999999999999999999998888999999999999999999999999999997

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=183.46  Aligned_cols=126  Identities=25%  Similarity=0.438  Sum_probs=103.4

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .+.|.+.+.||+|+||.||+|.++.+++.||+|.+....... ..+.+.+|+.+++.                       
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-----------------------   59 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-----------------------   59 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTS-----------------------
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHH-----------------------
Confidence            467999999999999999999999999999999997654322 23457788888887                       


Q ss_pred             cCCCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC-----cccc
Q psy13106        107 RLTHPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVE----KGSYTEKDASMLIRQVLEAVDYMHEAR-----YLSK  175 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~g-----iiH~  175 (177)
                       ++||||+++++++.+  ++.+|++||||++|+|.+++..    ...+++..++.++.||+.||+|||++|     ||||
T Consensus        60 -l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHr  138 (269)
T d2java1          60 -LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR  138 (269)
T ss_dssp             -CCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred             -CCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeC
Confidence             899999999998864  5679999999999999998863    356999999999999999999999976     9999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       139 Di  140 (269)
T d2java1         139 DL  140 (269)
T ss_dssp             -C
T ss_pred             cC
Confidence            97

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=4.1e-29  Score=188.29  Aligned_cols=129  Identities=26%  Similarity=0.435  Sum_probs=110.6

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.|.+.+.||+|+||.||+|.+..+++.||||++.+......  .....+|..++..++.                   
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~-------------------   63 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-------------------   63 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS-------------------
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc-------------------
Confidence            3579999999999999999999999999999999976543222  2334445444443222                   


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+.+.+|+|||||++|+|.+++.....+++..++.++.||+.||.|||++|||||||
T Consensus        64 --~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDl  133 (364)
T d1omwa3          64 --GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  133 (364)
T ss_dssp             --SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --CCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceee
Confidence              7899999999999999999999999999999999998888999999999999999999999999999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=181.58  Aligned_cols=124  Identities=25%  Similarity=0.384  Sum_probs=106.3

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      +.|.+++.||+|+||+||+|.+..+++.||||+++...... ....+.+|+.+++.                        
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~------------------------   57 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------------------------   57 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTT------------------------
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHh------------------------
Confidence            57999999999999999999999999999999996543322 34678889999998                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++.+|+|||+|.+ ++.+++..  ...+++..++.++.||+.||+|||++|||||||
T Consensus        58 l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDi  128 (298)
T d1gz8a_          58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  128 (298)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCcEEEeccccccccceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEcccc
Confidence            8999999999999999999999999965 55555532  345999999999999999999999999999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.8e-29  Score=182.65  Aligned_cols=128  Identities=17%  Similarity=0.354  Sum_probs=109.5

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCc---EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGT---MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...++|.+.+.||+|+||+||+|.++.+++   .+|||.+...........+.+|+.++++                   
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-------------------   83 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-------------------   83 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTT-------------------
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh-------------------
Confidence            345689999999999999999999876654   5888887544333334567889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+++.++++||||++|+|.+++... +.+++..+..++.||+.||+|||++||+||||
T Consensus        84 -----l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDl  154 (299)
T d1jpaa_          84 -----FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDL  154 (299)
T ss_dssp             -----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -----CCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCcc
Confidence                 89999999999999999999999999999999988764 46999999999999999999999999999997

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-28  Score=179.16  Aligned_cols=129  Identities=27%  Similarity=0.412  Sum_probs=113.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-----chhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-----EDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      +.++|++.+.||+|+||.||+|.+..+++.||||.+.+......     ...+.+|+.+++.++                
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~----------------   65 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS----------------   65 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHC----------------
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhc----------------
Confidence            45689999999999999999999999999999999976543221     234678999998843                


Q ss_pred             ccccccCCCCCceeeEEEEecCCeEEEEEeccCC-cchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTHPNIVQLIETFEDKHKVYLVMELVTG-GELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ..||||+++++++.+++.+|++||++.+ +++.+++..+..+++..++.++.||+.||+|||++||+||||
T Consensus        66 ------~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDi  136 (273)
T d1xwsa_          66 ------SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDI  136 (273)
T ss_dssp             ------SSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ------cCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccC
Confidence                  2499999999999999999999999976 678888888888999999999999999999999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-28  Score=183.77  Aligned_cols=126  Identities=27%  Similarity=0.515  Sum_probs=107.9

Q ss_pred             cCcccccceEEEe-eecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIEEKYILKE-LLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~~~y~~~~-~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ....+.+.|.+.. .||+|+||.||+|.+..+++.||||++..      .....+|+.++.+.                 
T Consensus         5 ~~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~------~~~~~~E~~~~~~~-----------------   61 (335)
T d2ozaa1           5 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRA-----------------   61 (335)
T ss_dssp             BCSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHH-----------------
T ss_pred             CCCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC------cHHHHHHHHHHHHh-----------------
Confidence            3445567898875 59999999999999999999999999853      24567788876542                 


Q ss_pred             ccccccCCCCCceeeEEEEec----CCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy13106        102 DKDKERLTHPNIVQLIETFED----KHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSK  175 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~  175 (177)
                            .+||||++++++|.+    ...+|+|||||+||+|.+++...  .++++.+++.++.||+.||+|||++||+||
T Consensus        62 ------~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHR  135 (335)
T d2ozaa1          62 ------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR  135 (335)
T ss_dssp             ------TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             ------cCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence                  579999999999875    46799999999999999999764  359999999999999999999999999999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       136 Di  137 (335)
T d2ozaa1         136 DV  137 (335)
T ss_dssp             CC
T ss_pred             cc
Confidence            97

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.3e-28  Score=181.71  Aligned_cols=131  Identities=24%  Similarity=0.337  Sum_probs=109.3

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCCc-----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENGT-----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +....++|.+.+.||+|+||+||+|.+..+++     .||+|.+...........+.+|+.++.++              
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--------------   97 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL--------------   97 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHH--------------
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHh--------------
Confidence            34455789999999999999999999876543     69999986554444456778899988882              


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-----------------------CCCHHHHHH
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-----------------------SYTEKDASM  155 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~  155 (177)
                               .+||||+++++++.+++.+|+|||||++|+|.+++....                       .+++..++.
T Consensus        98 ---------~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  168 (325)
T d1rjba_          98 ---------GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC  168 (325)
T ss_dssp             ---------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHH
T ss_pred             ---------cCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHH
Confidence                     279999999999999999999999999999999997542                       478999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCC
Q psy13106        156 LIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       156 ~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++.||+.||+|||++|||||||
T Consensus       169 i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         169 FAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             HHHHHHHHHHHHHHTTEEETTC
T ss_pred             HHHHHHHHHHHHHhCCeeeccC
Confidence            9999999999999999999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-28  Score=177.68  Aligned_cols=125  Identities=24%  Similarity=0.293  Sum_probs=114.1

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|++++.||+|+||+||+|.+..+++.||||+++...... ....+.+|+.+++.                        
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~------------------------   57 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE------------------------   57 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT------------------------
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHh------------------------
Confidence            58999999999999999999999999999999997554322 23567889999988                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.++...+++|+++.++++..++...+.+++..++.++.|++.||+|||++||+||||
T Consensus        58 l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDi  127 (292)
T d1unla_          58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL  127 (292)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             cCcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecc
Confidence            8999999999999999999999999999999998888888999999999999999999999999999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=4.4e-28  Score=177.21  Aligned_cols=124  Identities=29%  Similarity=0.394  Sum_probs=110.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccc-ccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALK-GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      ++|.+++.||+|+||+||+|.++ +++.||||++...... .....+.+|+.+++.                        
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~------------------------   56 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKE------------------------   56 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG------------------------
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHh------------------------
Confidence            58999999999999999999985 7799999999654322 224677889998888                        


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ++||||+++++++.+++..+++|+++.++.+..+....+.+++..++.++.||+.||+|||++|||||||
T Consensus        57 l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDi  126 (286)
T d1ob3a_          57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL  126 (286)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCC
Confidence            8999999999999999999999999988777777776778999999999999999999999999999997

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.3e-28  Score=176.67  Aligned_cols=124  Identities=25%  Similarity=0.470  Sum_probs=105.2

Q ss_pred             cceEEEee-ecccceeEEEEEEEecC--CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         29 EKYILKEL-LGTGAFSEVRLAESREN--GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        29 ~~y~~~~~-lg~g~~g~v~~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.|.+.+. ||+|+||.||+|.++.+  +..||||++...........+.+|+.++..                      
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~----------------------   65 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ----------------------   65 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHH----------------------
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHh----------------------
Confidence            56888884 99999999999987643  457999998654433334678899999998                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+ +.+|+|||||++|+|.+++... ..+++..+..++.||+.||+|||++||+||||
T Consensus        66 --l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDl  135 (285)
T d1u59a_          66 --LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL  135 (285)
T ss_dssp             --CCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --CCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcC
Confidence              899999999999865 5689999999999999987653 56999999999999999999999999999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.7e-28  Score=174.71  Aligned_cols=122  Identities=25%  Similarity=0.380  Sum_probs=108.7

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      ++|.+.+.||+|+||.||+|.+. +++.||||.+....  .....+.+|+.++..                        +
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~--~~~~~~~~E~~~l~~------------------------l   57 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA--MSEEDFIEEAEVMMK------------------------L   57 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS--SCHHHHHHHHHHHHH------------------------C
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCc--CcHHHHHHHHHHHHh------------------------c
Confidence            47999999999999999999986 46789999986432  234678899999998                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+++.+++|||||++|+|.+++... ..++++.+..++.||+.||+|||+++|+||||
T Consensus        58 ~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDl  127 (263)
T d1sm2a_          58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL  127 (263)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred             CCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeeccc
Confidence            9999999999999999999999999999999988654 45889999999999999999999999999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=180.25  Aligned_cols=121  Identities=23%  Similarity=0.359  Sum_probs=104.1

Q ss_pred             EEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc----chhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         33 LKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK----EDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~----~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .++.||+|+||+||+|.++.+++.||||+++.......    ...+.+|+.+++.                        +
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~------------------------l   57 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE------------------------L   57 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH------------------------C
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHh------------------------C
Confidence            46789999999999999999999999999865433221    2467889999998                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+++.+|+|||||.++++..+......+++..++.++.||+.||+|||++||+||||
T Consensus        58 ~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDi  126 (299)
T d1ua2a_          58 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL  126 (299)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccC
Confidence            999999999999999999999999988877777666677999999999999999999999999999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.95  E-value=1.5e-27  Score=177.47  Aligned_cols=120  Identities=29%  Similarity=0.438  Sum_probs=106.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|++++.||.|+||+||+|++..+++.||||+++..    ....+.+|+.++..                       
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~----~~~~~~~Ei~il~~-----------------------   85 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILEN-----------------------   85 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS----CHHHHHHHHHHHHH-----------------------
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH----HHHHHHHHHHHHHh-----------------------
Confidence            456899999999999999999999999999999998543    23567889999988                       


Q ss_pred             cC-CCCCceeeEEEEec--CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RL-THPNIVQLIETFED--KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~-~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       + +||||+++++++..  ...+++|||||.+++|..+.   ..+++..++.++.||+.||+|||++||+||||
T Consensus        86 -l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDi  155 (328)
T d3bqca1          86 -LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDV  155 (328)
T ss_dssp             -HTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -ccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence             5 59999999999974  46799999999999987763   45999999999999999999999999999997

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-27  Score=173.29  Aligned_cols=118  Identities=27%  Similarity=0.389  Sum_probs=100.6

Q ss_pred             eeecccceeEEEEEEEec--CCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCC
Q psy13106         35 ELLGTGAFSEVRLAESRE--NGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHP  111 (177)
Q Consensus        35 ~~lg~g~~g~v~~~~~~~--~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  111 (177)
                      ++||+|+||.||+|.+..  +++.||||+++...... ....+.+|+.++++                        ++||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~------------------------l~Hp   68 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ------------------------LDNP   68 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHT------------------------CCCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHh------------------------CCCC
Confidence            469999999999998754  45789999986543222 23567899999988                        8999


Q ss_pred             CceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        112 NIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       112 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      ||+++++++.+ +..++|||||++|+|.+++....++++..+..++.||+.||+|||++|||||||
T Consensus        69 nIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDl  133 (277)
T d1xbba_          69 YIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL  133 (277)
T ss_dssp             TBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCC
Confidence            99999999865 467899999999999999998888999999999999999999999999999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-27  Score=172.43  Aligned_cols=122  Identities=24%  Similarity=0.459  Sum_probs=108.8

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|.+.+.||+|+||.||+|+++ +++.||||.++....  ....+.+|+.++..                        +
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~Ev~~~~~------------------------l   56 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM--SEDEFIEEAKVMMN------------------------L   56 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS--CHHHHHHHHHHHHT------------------------C
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC--CHHHHHHHHHHHHh------------------------c
Confidence            47899999999999999999985 678899999875432  34678899999998                        8


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+++.+++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||
T Consensus        57 ~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dl  126 (258)
T d1k2pa_          57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL  126 (258)
T ss_dssp             CCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCC
T ss_pred             CCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccc
Confidence            999999999999999999999999999999998764 456899999999999999999999999999997

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-27  Score=174.31  Aligned_cols=126  Identities=23%  Similarity=0.456  Sum_probs=107.5

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcE--EEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTM--FAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.|.+.+.||+|+||.||+|.++.++..  ||||.+...........+.+|+.++..                      
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----------------------   66 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK----------------------   66 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTT----------------------
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHh----------------------
Confidence            36899999999999999999999988764  667776544333344678899999988                      


Q ss_pred             ccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHH
Q psy13106        106 ERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       106 ~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                        + +||||+++++++.+.+.+++|||||++|+|.+++...                ..+++..+..++.||+.||.|||
T Consensus        67 --l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH  144 (309)
T d1fvra_          67 --LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS  144 (309)
T ss_dssp             --CCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh
Confidence              6 6999999999999999999999999999999998643                45899999999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      ++||+||||
T Consensus       145 ~~~iiHrDl  153 (309)
T d1fvra_         145 QKQFIHRDL  153 (309)
T ss_dssp             HTTEECSCC
T ss_pred             cCCcccccc
Confidence            999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.1e-28  Score=179.84  Aligned_cols=125  Identities=24%  Similarity=0.387  Sum_probs=104.5

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      +..+|.+++.||+|+||+||+|.+..+++.||||++...........+.+|+.+++.                       
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~-----------------------   62 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR-----------------------   62 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHH-----------------------
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHH-----------------------
Confidence            456899999999999999999999999999999999754433334567889999999                       


Q ss_pred             cCCCCCceeeEEEEecCC-----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDKH-----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++.+..+.     .+|++|+ +.+++|.+++... .+++..++.++.||+.||+|||++|||||||
T Consensus        63 -l~hp~iv~~~~~~~~~~~~~~~~~~l~~~-~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDI  135 (345)
T d1pmea_          63 -FRHENIIGINDIIRAPTIEQMKDVYLVTH-LMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDL  135 (345)
T ss_dssp             -CCCTTBCCCCEEECCSSTTTCCCEEEEEE-CCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -cCCCCCCcEEEEEeeccccccceEEEEEe-ecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence             89999999999987543     3566655 5589999998765 5999999999999999999999999999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.3e-28  Score=175.21  Aligned_cols=124  Identities=19%  Similarity=0.318  Sum_probs=105.4

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ...++|.+.+.||+|+||.||+|...   ..||||++....... ....+.+|+.++.+                     
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~---------------------   60 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK---------------------   60 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTT---------------------
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHh---------------------
Confidence            44568999999999999999999754   469999986543222 23567789999988                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||++++++.. .+.++++||||++|+|.+++... .++++..+..++.||+.||+|||++|||||||
T Consensus        61 ---l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDl  130 (276)
T d1uwha_          61 ---TRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL  130 (276)
T ss_dssp             ---CCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEecccc
Confidence               89999999999764 45689999999999999999754 56999999999999999999999999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-27  Score=173.01  Aligned_cols=125  Identities=23%  Similarity=0.366  Sum_probs=107.3

Q ss_pred             cccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         25 PSIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        25 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      +...++|++.+.||+|+||.||+|.++ +++.||||.+....  ...+.+.+|+.++.+                     
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~---------------------   64 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS--MSPDAFLAEANLMKQ---------------------   64 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS--SCHHHHHHHHHHHHH---------------------
T ss_pred             ecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc--CCHHHHHHHHHHHHh---------------------
Confidence            344578999999999999999999975 56789999986433  234568899999999                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK--GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++. .+.+|+|||||++|+|.+++...  .++++..+..++.||+.||.|||++||+||||
T Consensus        65 ---l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDi  135 (272)
T d1qpca_          65 ---LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL  135 (272)
T ss_dssp             ---CCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ---CCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCcc
Confidence               89999999999875 45679999999999999977543  35899999999999999999999999999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.8e-27  Score=174.84  Aligned_cols=132  Identities=23%  Similarity=0.291  Sum_probs=113.0

Q ss_pred             ccCcccccceEEEeeecccceeEEEEEEEe-----cCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         22 IKGPSIEEKYILKELLGTGAFSEVRLAESR-----ENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        22 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      ..++...++|.+.+.||+|+||.||+|.+.     .+++.||||.+...........+.+|+.++..             
T Consensus        16 ~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~-------------   82 (311)
T d1t46a_          16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY-------------   82 (311)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH-------------
T ss_pred             ccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHh-------------
Confidence            345556689999999999999999999874     34578999999754433334567788888888             


Q ss_pred             cCCCcccccccC-CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC------------------CCCHHHHHHHH
Q psy13106         97 DNNSNDKDKERL-THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG------------------SYTEKDASMLI  157 (177)
Q Consensus        97 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~~  157 (177)
                                 + +||||+++++++.++..++++||||++|+|.+++....                  .+++..+..++
T Consensus        83 -----------l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  151 (311)
T d1t46a_          83 -----------LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS  151 (311)
T ss_dssp             -----------HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHH
T ss_pred             -----------ccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHH
Confidence                       5 69999999999999999999999999999999987543                  48899999999


Q ss_pred             HHHHHHHHHHHhCCccccCC
Q psy13106        158 RQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       158 ~qi~~~l~~LH~~giiH~Dl  177 (177)
                      .||+.||+|||++|||||||
T Consensus       152 ~qi~~gl~~LH~~~ivHrDL  171 (311)
T d1t46a_         152 YQVAKGMAFLASKNCIHRDL  171 (311)
T ss_dssp             HHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHHHHHhCCeeeccc
Confidence            99999999999999999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.9e-27  Score=173.86  Aligned_cols=131  Identities=23%  Similarity=0.371  Sum_probs=106.1

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEecCC-------cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccc
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRENG-------TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETN   96 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~   96 (177)
                      +....++|.+.+.||+|+||.||+|+...++       ..||||.+...........+.+|...+..+            
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~------------   75 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI------------   75 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH------------
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHh------------
Confidence            4556789999999999999999999987554       479999986554333345667777777763            


Q ss_pred             cCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC----------------CCCHHHHHHHHHHH
Q psy13106         97 DNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG----------------SYTEKDASMLIRQV  160 (177)
Q Consensus        97 ~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~qi  160 (177)
                                 .+||||+++++++.+++.++++||||++|+|.+++....                .+++..+..++.||
T Consensus        76 -----------~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  144 (299)
T d1fgka_          76 -----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV  144 (299)
T ss_dssp             -----------CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHH
T ss_pred             -----------cCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHH
Confidence                       279999999999999999999999999999999997543                48999999999999


Q ss_pred             HHHHHHHHhCCccccCC
Q psy13106        161 LEAVDYMHEARYLSKPR  177 (177)
Q Consensus       161 ~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+|||++|||||||
T Consensus       145 ~~al~ylH~~~ivHrDi  161 (299)
T d1fgka_         145 ARGMEYLASKKCIHRDL  161 (299)
T ss_dssp             HHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHhhhCCEEeeee
Confidence            99999999999999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6e-27  Score=170.94  Aligned_cols=126  Identities=17%  Similarity=0.314  Sum_probs=108.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCC----cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENG----TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDK  103 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      .++|.+.+.||+|+||.||+|.++.++    ..||||.+...........+.+|+.++.+                    
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~--------------------   65 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ--------------------   65 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT--------------------
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHh--------------------
Confidence            457999999999999999999987654    47999998654433333567889999998                    


Q ss_pred             ccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        104 DKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       104 ~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                          ++||||+++++++.+.+.++++||+|.++++.+++... ..+++..+..++.||+.||+|||++||+||||
T Consensus        66 ----l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDl  136 (283)
T d1mqba_          66 ----FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDL  136 (283)
T ss_dssp             ----CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ----cCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCcc
Confidence                89999999999999999999999999999999877654 56999999999999999999999999999997

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-27  Score=171.05  Aligned_cols=127  Identities=24%  Similarity=0.335  Sum_probs=107.1

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCC---cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...++|.+.+.||+|+||.||+|.+..++   ..+|||.+...........+.+|+.+++.                   
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~-------------------   64 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-------------------   64 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-------------------
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHh-------------------
Confidence            34568999999999999999999987543   46888887544333334567889999988                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE-KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++. .+.+|+|||||++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||
T Consensus        65 -----l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDl  134 (273)
T d1mp8a_          65 -----FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI  134 (273)
T ss_dssp             -----CCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -----CCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeecccc
Confidence                 89999999999985 4678999999999999998764 446999999999999999999999999999997

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-27  Score=177.81  Aligned_cols=125  Identities=22%  Similarity=0.399  Sum_probs=102.0

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.++|.+++.||+|+||+||+|.++.+++.||||++....... ....+.+|+.+++.                      
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~----------------------   73 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH----------------------   73 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHH----------------------
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHh----------------------
Confidence            6789999999999999999999999999999999996543221 23567889999998                      


Q ss_pred             ccCCCCCceeeEEEEecCC------eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKH------KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++...+      .+|++|||| +.+|..++. +..+++..++.++.||+.||+|||++||+||||
T Consensus        74 --l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDi  147 (346)
T d1cm8a_          74 --MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDL  147 (346)
T ss_dssp             --CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             --cCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence              89999999999997654      579999999 667777664 456999999999999999999999999999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-27  Score=178.79  Aligned_cols=125  Identities=22%  Similarity=0.375  Sum_probs=105.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .++|++++.||+|+||+||+|.+..+++.||||++....... ....+.+|+.+++.                       
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-----------------------   73 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-----------------------   73 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHH-----------------------
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHh-----------------------
Confidence            578999999999999999999999999999999997543222 22467789999998                       


Q ss_pred             cCCCCCceeeEEEEecC-----CeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFEDK-----HKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|||++++++++...     ...+++|+++.+++|.+++.. .++++..++.++.||+.||+|||++||+||||
T Consensus        74 -l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDi  147 (348)
T d2gfsa1          74 -MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDL  147 (348)
T ss_dssp             -CCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             -cCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence             8999999999998633     233555666779999998855 45999999999999999999999999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-27  Score=175.39  Aligned_cols=119  Identities=21%  Similarity=0.303  Sum_probs=100.6

Q ss_pred             ceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCC
Q psy13106         30 KYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLT  109 (177)
Q Consensus        30 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (177)
                      .|..++.||+|+||+||+|.+..+++.||||++....     ....+|+.+++.                        ++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~------------------------l~   71 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRK------------------------LD   71 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----SSCCHHHHHHHH------------------------CC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-----hHHHHHHHHHHh------------------------cC
Confidence            7999999999999999999999999999999986432     233578999988                        89


Q ss_pred             CCCceeeEEEEec------CCeEEEEEeccCCcchhHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        110 HPNIVQLIETFED------KHKVYLVMELVTGGELFDR---IVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       110 h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      |+||+++++++..      ..++|+|||||+++.+..+   ......+++..++.++.||+.||+|||++||+||||
T Consensus        72 h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDi  148 (350)
T d1q5ka_          72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDI  148 (350)
T ss_dssp             CTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             CCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            9999999999853      3468999999976533332   234556999999999999999999999999999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.7e-27  Score=169.24  Aligned_cols=122  Identities=26%  Similarity=0.438  Sum_probs=104.7

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ..++|++.+.||.|+||.||+|.++  +..||||.++..   ...+.+.+|+.+++.                       
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~---~~~~~~~~E~~~l~~-----------------------   56 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND---ATAQAFLAEASVMTQ-----------------------   56 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC---C--HHHHHTHHHHTT-----------------------
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH---HHHHHHHHHHHHHHh-----------------------
Confidence            3457999999999999999999985  678999998543   234678899999988                       


Q ss_pred             cCCCCCceeeEEEEe-cCCeEEEEEeccCCcchhHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFE-DKHKVYLVMELVTGGELFDRIVEKG--SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++||||+++++++. +++.+|+||||+++|+|.+++....  .+++..++.++.||+.||.|||+++|+||||
T Consensus        57 -l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dl  129 (262)
T d1byga_          57 -LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL  129 (262)
T ss_dssp             -CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             -CCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceecccc
Confidence             89999999999885 4567899999999999999987543  4899999999999999999999999999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.7e-27  Score=175.08  Aligned_cols=124  Identities=23%  Similarity=0.322  Sum_probs=103.6

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      +.++|++++.||+|+||+||+|.++.+++.||||+++...... ....+.+|+.+++.                      
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~----------------------   72 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC----------------------   72 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHH----------------------
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHh----------------------
Confidence            3478999999999999999999999999999999997544322 22457789999988                      


Q ss_pred             ccCCCCCceeeEEEEec------CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFED------KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||++++++|..      .+.+|+|||||.+ ++.+.+.  ..+++..++.++.||+.||.|||++||+||||
T Consensus        73 --l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDl  145 (355)
T d2b1pa1          73 --VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDL  145 (355)
T ss_dssp             --CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --cCCCCeeEEEEEEecccccccCceeEEEEeccch-HHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccC
Confidence              899999999999953      4689999999965 5555443  45899999999999999999999999999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.1e-26  Score=168.15  Aligned_cols=124  Identities=22%  Similarity=0.358  Sum_probs=107.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      ...++|++.+.||+|+||.||+|.+..+ +.||||++....  .....+.+|+.++..                      
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~--~~~~~~~~E~~~l~~----------------------   68 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT--MSPEAFLQEAQVMKK----------------------   68 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS--SCHHHHHHHHHHHHH----------------------
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECccc--CCHHHHHHHHHHHHh----------------------
Confidence            3457899999999999999999998755 579999986443  234678899999998                      


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVE--KGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        ++||||+++++++.+ +.+++|||||++|+|..++..  ...+++..+..++.||+.||+|||++||+||||
T Consensus        69 --l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~Dl  139 (285)
T d1fmka3          69 --LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL  139 (285)
T ss_dssp             --CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             --cccCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccc
Confidence              899999999999854 567999999999999988754  346999999999999999999999999999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.5e-27  Score=172.95  Aligned_cols=126  Identities=25%  Similarity=0.530  Sum_probs=111.8

Q ss_pred             ccceEEEeeecccceeEEEEEEEe---cCCcEEEEEEEeccccc---ccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESR---ENGTMFAVKIIDKKALK---GKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~~avK~i~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .++|.+++.||+|+||+||+|.+.   .+++.||||++......   .....+.+|+.++++                  
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~------------------   84 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH------------------   84 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHH------------------
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHh------------------
Confidence            367999999999999999999974   46889999999754322   123567789999998                  


Q ss_pred             ccccccCCC-CCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        102 DKDKERLTH-PNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       102 ~~~~~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                            ++| |||+++++++.++..++++||++.+++|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        85 ------l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDi  155 (322)
T d1vzoa_          85 ------IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDI  155 (322)
T ss_dssp             ------HHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ------ccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccC
Confidence                  655 8999999999999999999999999999999999888999999999999999999999999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=171.06  Aligned_cols=126  Identities=26%  Similarity=0.318  Sum_probs=105.9

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      .++|.+++.||+|+||+||+|.+..+++.||||++....... ....+.+|+.+++.                       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-----------------------   65 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL-----------------------   65 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHH-----------------------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHH-----------------------
Confidence            579999999999999999999999999999999986554322 33567899999999                       


Q ss_pred             cCCCCCceeeEEEEec--------CCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPNIVQLIETFED--------KHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       ++|+|++++++.+..        .+.+|++||+|.++.+.........+++..++.++.||+.||.|||++||+||||
T Consensus        66 -l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDl  143 (318)
T d3blha1          66 -LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDM  143 (318)
T ss_dssp             -CCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             -hcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCc
Confidence             899999999998854        3468999999987766655555667999999999999999999999999999997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.8e-26  Score=169.17  Aligned_cols=124  Identities=19%  Similarity=0.291  Sum_probs=102.2

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCc----EEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGT----MFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+|++++.||+|+||.||+|.+..+++    .||+|.+...........+.+|+.++..                     
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~---------------------   67 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS---------------------   67 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHH---------------------
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHh---------------------
Confidence            369999999999999999999987766    5778877544333344678899999998                     


Q ss_pred             cccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         ++||||+++++++.++ ..+++|+++.+++|.+.+... ..+++..+..++.||+.||+|||++|||||||
T Consensus        68 ---l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDl  137 (317)
T d1xkka_          68 ---VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL  137 (317)
T ss_dssp             ---CCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ---CCCCCEeeEEEEEecC-CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcc
Confidence               8999999999999765 567778889899999887654 46999999999999999999999999999997

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=3.1e-26  Score=168.48  Aligned_cols=128  Identities=21%  Similarity=0.324  Sum_probs=111.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+.|.+.+.||+|+||.||+|+++.     +++.||||.+...........+.+|+.+++.                 
T Consensus        10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~-----------------   72 (301)
T d1lufa_          10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE-----------------   72 (301)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHT-----------------
T ss_pred             CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHh-----------------
Confidence            345689999999999999999999864     4578999998654433334668899999998                 


Q ss_pred             cccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC------------------------CCCHHHHHHH
Q psy13106        101 NDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG------------------------SYTEKDASML  156 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------------~~~~~~~~~~  156 (177)
                             ++||||+++++++.+.+..+++||++++|+|.+++....                        .++...+..+
T Consensus        73 -------l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  145 (301)
T d1lufa_          73 -------FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI  145 (301)
T ss_dssp             -------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHH
T ss_pred             -------cCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHH
Confidence                   899999999999999999999999999999999986432                        3788899999


Q ss_pred             HHHHHHHHHHHHhCCccccCC
Q psy13106        157 IRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       157 ~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +.||+.||+|||++|||||||
T Consensus       146 ~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_         146 ARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHhhhcccCCeEeeEE
Confidence            999999999999999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.94  E-value=7.6e-26  Score=165.81  Aligned_cols=124  Identities=20%  Similarity=0.292  Sum_probs=109.3

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||+++...   ....+..|++++..                      
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~e~~~~~~----------------------   56 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKL----------------------   56 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHH----------------------
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc---CcHHHHHHHHHHHH----------------------
Confidence            45679999999999999999999999999999999985443   33557788888887                      


Q ss_pred             ccCC-CCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        106 ERLT-HPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       106 ~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                        +. |+|++.+++++.++...++|||++ +++|.+++...+ .++...+..++.|++.||+|||++|||||||
T Consensus        57 --l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDi  127 (293)
T d1csna_          57 --LAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI  127 (293)
T ss_dssp             --TTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             --hcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence              44 489999999999999999999999 789999887654 5999999999999999999999999999997

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.1e-26  Score=167.50  Aligned_cols=130  Identities=23%  Similarity=0.318  Sum_probs=105.2

Q ss_pred             cccceEEEeeecccceeEEEEEEEecC-CcEEEEEEEecccccc-cchhHHHHHHHHHhhcccccccccccccCCCcccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESREN-GTMFAVKIIDKKALKG-KEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKD  104 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~-~~~~avK~i~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++|.+++.||+|+||+||+|.+..+ ++.||||++....... ......+|+.+++.++.                  
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~------------------   66 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET------------------   66 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH------------------
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh------------------
Confidence            357899999999999999999999755 6779999997654322 23456788888877543                  


Q ss_pred             cccCCCCCceeeEEEEec-----CCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        105 KERLTHPNIVQLIETFED-----KHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       105 ~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                         .+||||+++++++..     ...++++||++.++.+..... ....+++..++.++.|++.||+|||++||+||||
T Consensus        67 ---~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDi  142 (305)
T d1blxa_          67 ---FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL  142 (305)
T ss_dssp             ---TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ---cCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCC
Confidence               589999999998852     356899999998876654433 3345999999999999999999999999999997

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-26  Score=166.56  Aligned_cols=125  Identities=27%  Similarity=0.398  Sum_probs=98.0

Q ss_pred             ccceEEEeeecccceeEEEEEEEecC---CcEEEEEEEeccccccc--chhHHHHHHHHHhhcccccccccccccCCCcc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESREN---GTMFAVKIIDKKALKGK--EDSLENEIKVLRRFSQSVHNRLDETNDNNSND  102 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~~avK~i~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .++|++.+.||+|+||.||+|++..+   ...||||++........  ...+.+|+.++..                   
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~-------------------   67 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-------------------   67 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHH-------------------
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHh-------------------
Confidence            35799999999999999999987643   24689999865433222  2567899999998                   


Q ss_pred             cccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        103 KDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK-GSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       103 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                           ++||||+++++++.+ +.++++||||+++++.+++..+ +.+++..+..++.||+.||.|||++||+||||
T Consensus        68 -----l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDi  137 (273)
T d1u46a_          68 -----LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL  137 (273)
T ss_dssp             -----CCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -----CCCCCEEEEEEEEee-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeee
Confidence                 899999999999965 4678999999999999877643 46999999999999999999999999999997

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.6e-26  Score=167.21  Aligned_cols=130  Identities=18%  Similarity=0.298  Sum_probs=110.6

Q ss_pred             CcccccceEEEeeecccceeEEEEEEEec-----CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccC
Q psy13106         24 GPSIEEKYILKELLGTGAFSEVRLAESRE-----NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDN   98 (177)
Q Consensus        24 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +....++|.+.+.||+|+||.||+|.+..     +++.||||.+...........+.+|+.+++.               
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~---------------   79 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE---------------   79 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG---------------
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHH---------------
Confidence            44556899999999999999999999863     3578999998654333333457788888888               


Q ss_pred             CCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHH
Q psy13106         99 NSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEK----------GSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus        99 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                               ++||||+++++.+.....++++||||++|+|.+++...          ..++...+..++.|++.||.|||
T Consensus        80 ---------l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH  150 (308)
T d1p4oa_          80 ---------FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN  150 (308)
T ss_dssp             ---------CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------cCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence                     89999999999999999999999999999999988643          23678899999999999999999


Q ss_pred             hCCccccCC
Q psy13106        169 EARYLSKPR  177 (177)
Q Consensus       169 ~~giiH~Dl  177 (177)
                      +++|+||||
T Consensus       151 ~~~ivHrDl  159 (308)
T d1p4oa_         151 ANKFVHRDL  159 (308)
T ss_dssp             HTTCBCSCC
T ss_pred             hCCeeeceE
Confidence            999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2e-25  Score=163.93  Aligned_cols=123  Identities=22%  Similarity=0.347  Sum_probs=103.7

Q ss_pred             cccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccc
Q psy13106         27 IEEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKE  106 (177)
Q Consensus        27 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (177)
                      ++++|++++.||+|+||.||+|.+..+++.||||++....   ....+..|+.+++.                       
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~i~~~-----------------------   58 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKM-----------------------   58 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT---TSCCHHHHHHHHHH-----------------------
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc---cCHHHHHHHHHHHH-----------------------
Confidence            3568999999999999999999999999999999986542   34567889999988                       


Q ss_pred             cCCCCC-ceeeEEEEecCCeEEEEEeccCCcchhHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        107 RLTHPN-IVQLIETFEDKHKVYLVMELVTGGELFDRIV-EKGSYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       107 ~~~h~~-i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                       +.|++ |+.+..++.+++..++|||++ ++++.+.+. ....+++..+..++.|++.||+|||++|||||||
T Consensus        59 -l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDi  129 (299)
T d1ckia_          59 -MQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDV  129 (299)
T ss_dssp             -STTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             -ccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence             65555 566677778889999999999 556666554 4456999999999999999999999999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-25  Score=165.55  Aligned_cols=129  Identities=21%  Similarity=0.277  Sum_probs=102.9

Q ss_pred             ccccceEEEeeecccceeEEEEEEEecC-----CcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCC
Q psy13106         26 SIEEKYILKELLGTGAFSEVRLAESREN-----GTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNS  100 (177)
Q Consensus        26 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...++|.+.+.||+|+||.||+|.+..+     ++.||||.+...........+..|..++.+.                
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~----------------   73 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI----------------   73 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHH----------------
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhh----------------
Confidence            4457899999999999999999998653     4689999986544333334566666666652                


Q ss_pred             cccccccCCCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhc----------------CCCCHHHHHHHHHHHHHH
Q psy13106        101 NDKDKERLTHPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEK----------------GSYTEKDASMLIRQVLEA  163 (177)
Q Consensus       101 ~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~  163 (177)
                             ..|+||+.+++++.+ +..++++||||++|+|.+++...                ..+++..+..++.||+.|
T Consensus        74 -------~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  146 (299)
T d1ywna1          74 -------GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG  146 (299)
T ss_dssp             -------CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHH
T ss_pred             -------cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHH
Confidence                   368999999988764 45789999999999999998653                238899999999999999


Q ss_pred             HHHHHhCCccccCC
Q psy13106        164 VDYMHEARYLSKPR  177 (177)
Q Consensus       164 l~~LH~~giiH~Dl  177 (177)
                      |.|||++|||||||
T Consensus       147 l~ylH~~~ivHrDl  160 (299)
T d1ywna1         147 MEFLASRKCIHRDL  160 (299)
T ss_dssp             HHHHHHTTCCCSCC
T ss_pred             HHHHHhCCCcCCcC
Confidence            99999999999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-24  Score=160.96  Aligned_cols=122  Identities=20%  Similarity=0.300  Sum_probs=101.7

Q ss_pred             EEEeeecccceeEEEEEEEecCC---cEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         32 ILKELLGTGAFSEVRLAESRENG---TMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        32 ~~~~~lg~g~~g~v~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      .+.++||+|+||+||+|.+..++   ..||||.++..........+.+|+.++.+                        +
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~------------------------l   85 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD------------------------F   85 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHT------------------------C
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh------------------------C
Confidence            44678999999999999986543   36899998643333334678899999998                        8


Q ss_pred             CCCCceeeEEEEec-CCeEEEEEeccCCcchhHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q psy13106        109 THPNIVQLIETFED-KHKVYLVMELVTGGELFDRIVEKG-SYTEKDASMLIRQVLEAVDYMHEARYLSKPR  177 (177)
Q Consensus       109 ~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~giiH~Dl  177 (177)
                      +||||+++++++.+ ++.+++|||||++++|.+++.... .++...+..++.|++.||.|||+.||+||||
T Consensus        86 ~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDL  156 (311)
T d1r0pa_          86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL  156 (311)
T ss_dssp             CCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCc
Confidence            99999999998764 568999999999999999887543 4778889999999999999999999999997

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-24  Score=157.98  Aligned_cols=121  Identities=24%  Similarity=0.340  Sum_probs=99.1

Q ss_pred             ccceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         28 EEKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        28 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .++|.+.+.||+|+||.||+|++  +++.||||.+....    ......|.+++....                      
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~----------------------   53 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVM----------------------   53 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTT----------------------
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhHHHHHHHHHHHhh----------------------
Confidence            56899999999999999999986  57899999986442    223334444333211                      


Q ss_pred             CCCCCceeeEEEEecCC----eEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--------CCcccc
Q psy13106        108 LTHPNIVQLIETFEDKH----KVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHE--------ARYLSK  175 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~--------~giiH~  175 (177)
                      ++||||+++++++.+.+    .+|+|||||++|+|.+++.+. +++......++.|++.||.|||+        +|||||
T Consensus        54 ~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHr  132 (303)
T d1vjya_          54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR  132 (303)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS
T ss_pred             CCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeecc
Confidence            78999999999987543    589999999999999999775 48999999999999999999996        599999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       133 Dl  134 (303)
T d1vjya_         133 DL  134 (303)
T ss_dssp             CC
T ss_pred             cc
Confidence            97

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.6e-20  Score=140.73  Aligned_cols=140  Identities=29%  Similarity=0.422  Sum_probs=103.3

Q ss_pred             cCcccc-cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCc
Q psy13106         23 KGPSIE-EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSN  101 (177)
Q Consensus        23 ~~~~~~-~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      .++.+. ++|++++.||.|+||+||+|++..+++.||||++.+...  ......+|+.+++.+....             
T Consensus         6 ~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~--~~~~~~~Ei~~l~~l~~~~-------------   70 (362)
T d1q8ya_           6 KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--YTEAAEDEIKLLQRVNDAD-------------   70 (362)
T ss_dssp             TTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHHTC-------------
T ss_pred             CCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc--chHHHHHHHHHHHHhcchh-------------
Confidence            355554 479999999999999999999999999999999965432  2355677888887754210             


Q ss_pred             ccccccCCCCCceeeEEEEec--CCeEEEEEeccCCcch-hHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy13106        102 DKDKERLTHPNIVQLIETFED--KHKVYLVMELVTGGEL-FDRI--VEKGSYTEKDASMLIRQVLEAVDYMHE-ARYLSK  175 (177)
Q Consensus       102 ~~~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L-~~~l--~~~~~~~~~~~~~~~~qi~~~l~~LH~-~giiH~  175 (177)
                      ......+.|+||+++++++..  ....+++|.++..... ....  .....+++..++.++.||+.||+|||+ .||+||
T Consensus        71 ~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHr  150 (362)
T d1q8ya_          71 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHT  150 (362)
T ss_dssp             CSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECS
T ss_pred             hhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccc
Confidence            001112468999999988863  4566666666644332 2222  233468999999999999999999998 899999


Q ss_pred             CC
Q psy13106        176 PR  177 (177)
Q Consensus       176 Dl  177 (177)
                      ||
T Consensus       151 Dl  152 (362)
T d1q8ya_         151 DI  152 (362)
T ss_dssp             CC
T ss_pred             cC
Confidence            97

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.77  E-value=2.9e-18  Score=117.65  Aligned_cols=111  Identities=20%  Similarity=0.165  Sum_probs=80.8

Q ss_pred             eEEEeeecccceeEEEEEEEecCCcEEEEEEEeccccccc-----------------chhHHHHHHHHHhhccccccccc
Q psy13106         31 YILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGK-----------------EDSLENEIKVLRRFSQSVHNRLD   93 (177)
Q Consensus        31 y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~-----------------~~~~~~e~~~~~~~~~~~~~~~~   93 (177)
                      +.+.++||.|+||.||+|.+. +++.||||++........                 ......|...+..          
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----------   70 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK----------   70 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH----------
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHH----------
Confidence            467899999999999999875 688999998753211100                 0112234444444          


Q ss_pred             ccccCCCcccccccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy13106         94 ETNDNNSNDKDKERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEARYL  173 (177)
Q Consensus        94 ~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~gii  173 (177)
                                    +.|.+++..+++..    .+++||++++..+.+       ++...+..++.|++.+|+|||++||+
T Consensus        71 --------------l~~~~v~~~~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~gii  125 (191)
T d1zara2          71 --------------LQGLAVPKVYAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIV  125 (191)
T ss_dssp             --------------TTTSSSCCEEEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEE
T ss_pred             --------------ccCCCcceEEEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEE
Confidence                          78899988886532    279999998765433       45556778999999999999999999


Q ss_pred             ccCC
Q psy13106        174 SKPR  177 (177)
Q Consensus       174 H~Dl  177 (177)
                      ||||
T Consensus       126 HrDi  129 (191)
T d1zara2         126 HGDL  129 (191)
T ss_dssp             CSCC
T ss_pred             EccC
Confidence            9997

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.51  E-value=0.0014  Score=45.11  Aligned_cols=112  Identities=15%  Similarity=0.134  Sum_probs=75.0

Q ss_pred             cceEEEeeecccceeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccC
Q psy13106         29 EKYILKELLGTGAFSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERL  108 (177)
Q Consensus        29 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (177)
                      +.|+.++..+.++.+.||+..  ..++.+.+|...... ......+.+|..++..++                       
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~-~~~~~~~~~E~~~l~~l~-----------------------   67 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRY-KGTTYDVEREKDMMLWLE-----------------------   67 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGG-TTSTTCHHHHHHHHHHHT-----------------------
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCc-ccchhhHHHHHHHHHHHh-----------------------
Confidence            467777766666667899775  346677888765332 223345677887777632                       


Q ss_pred             CCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        109 THPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       109 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                      .+-.+++++.+...++..+++|++++|.++.+....     ......+..++...++-||+..
T Consensus        68 ~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~-----~~~~~~~~~~l~~~l~~lH~~~  125 (263)
T d1j7la_          68 GKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             TTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT-----CSCHHHHHHHHHHHHHHHHTSC
T ss_pred             ccCCCCcEEEEEecCCceEEEEEecccccccccccc-----cccHHHHHHHHHHHHHHHhccC
Confidence            234467888888888899999999999888665422     1223345677888888899754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.91  E-value=0.0059  Score=44.76  Aligned_cols=112  Identities=14%  Similarity=0.059  Sum_probs=62.2

Q ss_pred             EeeecccceeEEEEEEEecCCcEEEEEEEeccc--c----cccchhHHHHHHHHHhhcccccccccccccCCCccccccc
Q psy13106         34 KELLGTGAFSEVRLAESRENGTMFAVKIIDKKA--L----KGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKER  107 (177)
Q Consensus        34 ~~~lg~g~~g~v~~~~~~~~~~~~avK~i~~~~--~----~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (177)
                      .+.||.|....||++....+++.+.+|.-....  .    .-...+...|...+..+..                     
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~---------------------   89 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE---------------------   89 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHT---------------------
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhh---------------------
Confidence            557899999999999887778889999754321  1    1122345668877776442                     


Q ss_pred             CCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy13106        108 LTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMH  168 (177)
Q Consensus       108 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH  168 (177)
                      .....+++++.+  +....+++||++.+..+..-....+......+..+...++..+...|
T Consensus        90 ~~p~~vP~v~~~--d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~  148 (392)
T d2pula1          90 HVPHLVPRVFYS--DTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSS  148 (392)
T ss_dssp             TCGGGSCCEEEE--ETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTS
T ss_pred             hCCCCcceEEEE--cCCCCEEEEeccCCcccchhhhcccchhHHHHHHHHHHHHHHHHHhc
Confidence            223346666654  44456789999977555332222222333344444444444444444

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.20  E-value=0.13  Score=34.48  Aligned_cols=100  Identities=14%  Similarity=0.179  Sum_probs=62.7

Q ss_pred             eecccc-eeEEEEEEEecCCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCcccccccCCCCCce
Q psy13106         36 LLGTGA-FSEVRLAESRENGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDKERLTHPNIV  114 (177)
Q Consensus        36 ~lg~g~-~g~v~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~  114 (177)
                      .+..|. .+.||+.... .+..+.+|..+..    ....+..|...++.+..                      ..-.++
T Consensus        17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~----~~~~l~~E~~~l~~L~~----------------------~gvpvP   69 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG----ALNELQDEAARLSWLAT----------------------TGVPCA   69 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-TSCCEEEEEECSC----TTSCHHHHHHHHHHHHT----------------------TTCCBC
T ss_pred             EcCCcccCCeEEEEEeC-CCCEEEEEeCCcc----CHhHHHHHHHHHHHHHh----------------------cCCCCC
Confidence            334444 3578877643 4556788875332    23456777777766432                      233467


Q ss_pred             eeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy13106        115 QLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEA  170 (177)
Q Consensus       115 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~  170 (177)
                      +++....+++..+++|++++|.++.+..     .+...   .+.++...|+-||+.
T Consensus        70 ~v~~~~~~~~~~~~v~~~i~G~~~~~~~-----~~~~~---~~~~l~~~la~LH~~  117 (255)
T d1nd4a_          70 AVLDVVTEAGRDWLLLGEVPGQDLLSSH-----LAPAE---KVSIMADAMRRLHTL  117 (255)
T ss_dssp             CEEEEEECSSCEEEEEECCSSEETTTSC-----CCHHH---HHHHHHHHHHHHTTS
T ss_pred             ceeeecccccceEEEEEeeecccccccc-----ccHHH---HHHHHHHHHHHHccC
Confidence            7888877888899999999887664421     22222   345677778888864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.87  E-value=3.9  Score=29.02  Aligned_cols=101  Identities=13%  Similarity=0.086  Sum_probs=61.8

Q ss_pred             EEeeecccceeEEEEEEEec-------CCcEEEEEEEecccccccchhHHHHHHHHHhhcccccccccccccCCCccccc
Q psy13106         33 LKELLGTGAFSEVRLAESRE-------NGTMFAVKIIDKKALKGKEDSLENEIKVLRRFSQSVHNRLDETNDNNSNDKDK  105 (177)
Q Consensus        33 ~~~~lg~g~~g~v~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (177)
                      -++.|+.|..-.+|++....       ....+.+++.. ..  .......+|..+++..+.                   
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~--~~~idr~~E~~i~~~ls~-------------------  103 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP--ETESHLVAESVIFTLLSE-------------------  103 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC--CCHHHHHHHHHHHHHHHH-------------------
T ss_pred             EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc--chhhHHHHHHHHHHHHHh-------------------
Confidence            35678888888999988643       24567777753 11  122345678888777542                   


Q ss_pred             ccCCCCCceeeEEEEecCCeEEEEEeccCCcchhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy13106        106 ERLTHPNIVQLIETFEDKHKVYLVMELVTGGELFDRIVEKGSYTEKDASMLIRQVLEAVDYMHEAR  171 (177)
Q Consensus       106 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~g  171 (177)
                          +.-.+++++.+..    .++|+|++|..+...-     +.   ...+..+++..|+-+|...
T Consensus       104 ----~gl~Pkll~~~~~----g~I~efi~g~~l~~~d-----~~---~~~~~~~iA~~La~lH~~~  153 (395)
T d1nw1a_         104 ----RHLGPKLYGIFSG----GRLEEYIPSRPLSCHE-----IS---LAHMSTKIAKRVAKVHQLE  153 (395)
T ss_dssp             ----TTSSSCEEEEETT----EEEECCCCEEECCTTG-----GG---SHHHHHHHHHHHHHHTTCC
T ss_pred             ----CCCCCeEEEEcCC----ceEEEEeccccCChhh-----cc---chhhhHHHHHHHHHHhhcc
Confidence                2234577776642    5789999875553211     11   1235667778888888754