Psyllid ID: psy13211

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------9
Protein Sequence
MFFHGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHHHHHHHHHcccccccEcEccccccccHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHccc
Coil and Loop (DISEMBL)
mffhgktkstDIQVRMFRIHIIRNHyrkhtgrkpfkcvvcKQFFATYSGAYQHLrrthgqesCSSLKALRklrgpkpkpdstrslrkkk
Flexible Loop (DISEMBL)
mffhgktkstdiqvRMFRIHIIRNhyrkhtgrkpfKCVVCKQFFATYSGAYQHLRRTHGQESCSSLkalrklrgpkpkpdstrslrkkk
Low Complexity Region (SEG)
MFFHGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK
Disordered region (IsUnstruct)
**********DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR**********************************
Disordered Region (DISOPRED)
***HGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALR*******************
Disordered Region (DISEMBL)
*********TDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHL*********SSLKALRKL*****************
Disordered Region (DISPRO)
*FFHGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYS***Q*************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFFHGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	89	2.2.26 [Sep-21-2011]
Q802Y8	671	Zinc finger and BTB domai	yes	N/A	0.685	0.090	0.405	4e-06
Q05516	673	Zinc finger and BTB domai	yes	N/A	0.685	0.090	0.391	2e-05
Q9GZV8	571	PR domain zinc finger pro	no	N/A	0.584	0.091	0.384	6e-05
P17032	561	Zinc finger protein 37A O	no	N/A	0.426	0.067	0.487	6e-05
E9Q3T6	561	PR domain zinc finger pro	no	N/A	0.494	0.078	0.446	0.0001
Q9JKD9	465	Zinc finger and BTB domai	no	N/A	0.640	0.122	0.382	0.0002
Q00453	211	Probable transcription re	yes	N/A	0.685	0.289	0.344	0.0002
A2T7E6	487	Zinc finger and BTB domai	no	N/A	0.640	0.117	0.382	0.0002
Q9Y2Y4	487	Zinc finger and BTB domai	no	N/A	0.640	0.117	0.382	0.0003
A1YGK1	487	Zinc finger and BTB domai	N/A	N/A	0.640	0.117	0.382	0.0003

>sp|Q802Y8|ZB16A_DANRE Zinc finger and BTB domain-containing protein 16-A OS=Danio rerio GN=zbtb16a PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 585 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 644

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 645 KHMKGHKPEDIPPD 658

Probable transcription factor. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Inhibits neurogenesis.
Danio rerio (taxid: 7955)

>sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing protein 16 OS=Homo sapiens GN=ZBTB16 PE=1 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL +++
Sbjct: 587 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQ 646

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 647 KHMKGHKPEEIPPD 660

Probable transcription factor. May play a role in myeloid maturation and in the development and/or maintenance of other differentiated tissues. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Homo sapiens (taxid: 9606)

>sp|Q9GZV8|PRD14_HUMAN PR domain zinc finger protein 14 OS=Homo sapiens GN=PRDM14 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 21  IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKL 72
           I+R H R+H+G KPFKC  C + FA+++    H+RR+H ++   S     K+
Sbjct: 503 ILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCSICGKI 554

Transcription factor that has both positive and negative roles on transcription. Required for the maintenance of emryonic stem cell identity and the reacquisition of pluripotency in somatic cells. May play an essential role in germ cell development at 2 levels: the reacquisition of potential pluripotency, including SOX2 up-regulation, and successful epigenetic reprogramming, characterized by EHMT1 repression (By similarity). Directly up-regulates the expression of pluripotency gene POU5F1 through its proximal enhancer. Binds to the DNA consensus sequence 5'-GGTC[TC]CTAA-3'.

Homo sapiens (taxid: 9606)

>sp|P17032|ZN37A_HUMAN Zinc finger protein 37A OS=Homo sapiens GN=ZNF37A PE=2 SV=3

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 22  IRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ 60
           +  H R HTG KP++C+ C +FF  YSG  +HLRR  G+
Sbjct: 426 LTKHLRTHTGEKPYECIQCGKFFCYYSGFTEHLRRHTGE 464

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|E9Q3T6|PRD14_MOUSE PR domain zinc finger protein 14 OS=Mus musculus GN=Prdm14 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 21  IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH---GQESCS 64
           I+R H R+H+G KPFKC  C + FA+++    H+RR+H   G+ SC 
Sbjct: 493 ILRTHIRQHSGEKPFKCKHCGKAFASHAAHDSHVRRSHKDNGRSSCD 539

Transcription factor that has both positive and negative roles on transcription. Plays a role in cellular pluripotency (By similarity). Essential for germ cell development at 2 levels: the reacquisition of potential pluripotency, including SOX2 up-regulation, and successful epigenetic reprogramming, characterized by EHMT1 repression.

Mus musculus (taxid: 10090)

>sp|Q9JKD9|ZBT32_MOUSE Zinc finger and BTB domain-containing protein 32 OS=Mus musculus GN=Zbtb32 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 11/68 (16%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG---------QESCSSLKALR 70
           H +  HYR HTG KPF C +C Q    +S   +HL RTHG         +  C SL +++
Sbjct: 363 HQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL-RTHGAAPYRCPLCRAGCPSLASMQ 421

Query: 71  -KLRGPKP 77
             +RG  P
Sbjct: 422 AHMRGHSP 429

DNA-binding protein that binds to the to a 5'-TGTACAGTGT-3' core sequence. May function as a transcriptional transactivator and transcriptional repressor (By similarity). Probably exerts its repressor effect by preventing GATA3 from binding to DNA. May play a role in regulating the differentiation and activation of helper T-cells.

Mus musculus (taxid: 10090)

>sp|Q00453|RGM1_YEAST Probable transcription repressor protein RGM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RGM1 PE=1 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 11 DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALR 70
          D  +   R   +  H RKHTG KPF+C +C +FF+      QH    H      SL+ L+
Sbjct: 26 DCNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQHQSSVHSDVDLMSLRRLQ 85

Query: 71 K 71
          +
Sbjct: 86 Q 86

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|A2T7E6|ZBT32_PANTR Zinc finger and BTB domain-containing protein 32 OS=Pan troglodytes GN=ZBTB32 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 11/68 (16%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF C +C Q    +S   +HL RTHG            C SL +++
Sbjct: 386 HQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL-RTHGAAPYRXXLCGAGCPSLASMQ 444

Query: 71  -KLRGPKP 77
             +RG  P
Sbjct: 445 AHMRGHSP 452

DNA-binding protein that binds to the to a 5'-TGTACAGTGT-3' core sequence. May function as a transcriptional transactivator and transcriptional repressor. Probably exerts its repressor effect by preventing GATA3 from binding to DNA. May play a role in regulating the differentiation and activation of helper T-cells.

Pan troglodytes (taxid: 9598)

>sp|Q9Y2Y4|ZBT32_HUMAN Zinc finger and BTB domain-containing protein 32 OS=Homo sapiens GN=ZBTB32 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 11/68 (16%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF C +C Q    +S   +HL RTHG            C SL +++
Sbjct: 386 HQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL-RTHGAAPYRCSLCGAGCPSLASMQ 444

Query: 71  -KLRGPKP 77
             +RG  P
Sbjct: 445 AHMRGHSP 452

DNA-binding protein that binds to the to a 5'-TGTACAGTGT-3' core sequence. May function as a transcriptional transactivator and transcriptional repressor. Probably exerts its repressor effect by preventing GATA3 from binding to DNA. May play a role in regulating the differentiation and activation of helper T-cells.

Homo sapiens (taxid: 9606)

>sp|A1YGK1|ZBT32_PANPA Zinc finger and BTB domain-containing protein 32 OS=Pan paniscus GN=ZBTB32 PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 11/68 (16%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF C +C Q    +S   +HL RTHG            C SL +++
Sbjct: 386 HQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL-RTHGAAPYRCSLCGAGCPSLASMQ 444

Query: 71  -KLRGPKP 77
             +RG  P
Sbjct: 445 AHMRGHSP 452

DNA-binding protein that binds to the to a 5'-TGTACAGTGT-3' core sequence. May function as a transcriptional transactivator and transcriptional repressor. Probably exerts its repressor effect by preventing GATA3 from binding to DNA. May play a role in regulating the differentiation and activation of helper T-cells.

Pan paniscus (taxid: 9597)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
432901337	664	PREDICTED: zinc finger and BTB domain-co	0.685	0.091	0.405	0.0001
348532516	664	PREDICTED: zinc finger and BTB domain-co	0.685	0.091	0.405	0.0002
403304166	529	PREDICTED: PR domain zinc finger protein	0.494	0.083	0.466	0.0002
296226660	195	PREDICTED: PR domain zinc finger protein	0.584	0.266	0.403	0.0002
41054501	671	zinc finger and BTB domain-containing pr	0.685	0.090	0.405	0.0002
182892192	671	Zbtb16 protein [Danio rerio]	0.685	0.090	0.405	0.0002
284468449	667	promyelocytic leukemia zinc finger prote	0.685	0.091	0.405	0.0002
432889905	636	PREDICTED: zinc finger and BTB domain-co	0.662	0.092	0.405	0.0002
348535244	701	PREDICTED: zinc finger and BTB domain-co	0.662	0.084	0.405	0.0002
256076308	420	zinc finger protein [Schistosoma mansoni	0.471	0.1	0.5	0.0002

>gi|432901337|ref|XP_004076837.1| PREDICTED: zinc finger and BTB domain-containing protein 16-A-like [Oryzias latipes]

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 578 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 637

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 638 KHMKGHKPEDIPPD 651

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348532516|ref|XP_003453752.1| PREDICTED: zinc finger and BTB domain-containing protein 16-A-like [Oreochromis niloticus]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 578 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 637

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 638 KHMKGHKPEDIPPD 651

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403304166|ref|XP_003942679.1| PREDICTED: PR domain zinc finger protein 14 [Saimiri boliviensis boliviensis]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 21  IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ-ESCS 64
           I+R H R+H+G KPFKC  C + FA+++    H+RR+H + E CS
Sbjct: 461 ILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDEGCS 505

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296226660|ref|XP_002759030.1| PREDICTED: PR domain zinc finger protein 14-like [Callithrix jacchus]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 21  IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKL 72
           I+R H R+H+G KPFKC  C + FA+++    H+RR+H ++ C S     K+
Sbjct: 127 ILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDECCSCSICGKI 178

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|41054501|ref|NP_955929.1| zinc finger and BTB domain-containing protein 16-A [Danio rerio] gi|82241827|sp|Q802Y8.1|ZB16A_DANRE RecName: Full=Zinc finger and BTB domain-containing protein 16-A; AltName: Full=Promyelocytic leukemia zinc finger protein-A; AltName: Full=Zinc finger protein PLZF-A gi|28422784|gb|AAH46887.1| Zinc finger and BTB domain containing 16 [Danio rerio]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 585 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 644

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 645 KHMKGHKPEDIPPD 658

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|182892192|gb|AAI65228.1| Zbtb16 protein [Danio rerio]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 585 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 644

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 645 KHMKGHKPEDIPPD 658

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|284468449|gb|ADB90284.1| promyelocytic leukemia zinc finger protein [Labeo rohita]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct: 581 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 640

Query: 71  K-LRGPKPK---PD 80
           K ++G KP+   PD
Sbjct: 641 KHMKGHKPEDIPPD 654

Source: Labeo rohita

Species: Labeo rohita

Genus: Labeo

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432889905|ref|XP_004075389.1| PREDICTED: zinc finger and BTB domain-containing protein 16-A-like [Oryzias latipes]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 10/69 (14%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG---------QESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G         Q+ C SL A++
Sbjct: 550 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTVCQDFCPSLAAMQ 609

Query: 71  K-LRGPKPK 78
           K ++G KP+
Sbjct: 610 KHMKGHKPE 618

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348535244|ref|XP_003455111.1| PREDICTED: zinc finger and BTB domain-containing protein 16-A-like [Oreochromis niloticus]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 10/69 (14%)

Query: 20  HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG---------QESCSSLKALR 70
           H +  HYR HTG KPF+C +C Q    YS   +HLR  +G         Q+ C SL A++
Sbjct: 615 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICQDFCPSLAAMQ 674

Query: 71  K-LRGPKPK 78
           K ++G KP+
Sbjct: 675 KHMKGHKPE 683

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|256076308|ref|XP_002574455.1| zinc finger protein [Schistosoma mansoni]

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 21  IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES 62
           I+R H R+H+G KPFKC  C + FA+++    H+RRTH  ES
Sbjct: 358 ILRTHIRQHSGEKPFKCKFCWKPFASHAAHDSHVRRTHSSES 399

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
SGD|S000004794	211	RGM1 "Putative zinc finger DNA	0.707	0.298	0.369	4.6e-07
UNIPROTKB|F1N9T2	303	LOC100858709 "Uncharacterized	0.696	0.204	0.384	4.6e-07
ZFIN|ZDB-GENE-030131-1989	671	zbtb16a "zinc finger and BTB d	0.662	0.087	0.405	6.3e-07
UNIPROTKB|Q32PJ4	673	ZBTB16 "Uncharacterized protei	0.662	0.087	0.391	1e-06
UNIPROTKB|F1N9T4	378	LOC100858709 "Uncharacterized	0.505	0.119	0.444	1.2e-06
UNIPROTKB|F6Y0P3	673	ZBTB16 "Uncharacterized protei	0.662	0.087	0.391	1.3e-06
UNIPROTKB|Q05516	673	ZBTB16 "Zinc finger and BTB do	0.662	0.087	0.391	1.3e-06
UNIPROTKB|Q5S3S9	673	Zbtb16 "Zinc finger and BTB do	0.662	0.087	0.391	1.3e-06
UNIPROTKB|F1RU08	571	PRDM14 "Uncharacterized protei	0.494	0.077	0.466	1.4e-06
UNIPROTKB|E1C9I5	665	ZBTB16 "Uncharacterized protei	0.662	0.088	0.391	1.7e-06

SGD|S000004794 RGM1 "Putative zinc finger DNA binding transcription factor" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 117 (46.2 bits), Expect = 4.6e-07, P = 4.6e-07
 Identities = 24/65 (36%), Positives = 34/65 (52%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPK- 78
             H+ R H RKHTG KPF+C +C +FF+      QH    H      SL+ L++        
Sbjct:    36 HLAR-HIRKHTGEKPFQCNICLKFFSRIDNLRQHQSSVHSDVDLMSLRRLQQSANSTAND 94

Query:    79 PDSTR 83
             P++TR
Sbjct:    95 PNATR 99

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS

UNIPROTKB|F1N9T2 LOC100858709 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 4.6e-07, P = 4.6e-07
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query:     4 HGKTKSTDIQV--RMFRIH-IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ 60
             H K K +   V  + F    I+R H R+H+G KPFKC  C + FA+++    H+RRTH +
Sbjct:   216 HSKDKGSTCAVCGQAFTASSILRTHIRQHSGEKPFKCKHCGKAFASHAAHDSHMRRTHSK 275

Query:    61 ESCSS 65
             +  S+
Sbjct:   276 DKGST 280

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-1989 zbtb16a "zinc finger and BTB domain containing 16a" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 28/69 (40%), Positives = 38/69 (55%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL A++
Sbjct:   585 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQ 644

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   645 KHMKGHKPE 653

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0050767 "regulation of neurogenesis" evidence=IGI

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q32PJ4 ZBTB16 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG---------QESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL +++
Sbjct:   587 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICSEYCPSLSSMQ 646

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   647 KHMKGHKPE 655

GO:0061036 "positive regulation of cartilage development" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0048133 "male germ-line stem cell division" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045778 "positive regulation of ossification" evidence=IEA

GO:0045638 "negative regulation of myeloid cell differentiation" evidence=IEA

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0032332 "positive regulation of chondrocyte differentiation" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0009880 "embryonic pattern specification" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0001823 "mesonephros development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N9T4 LOC100858709 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query:    21 IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS 65
             I+R H R+H+G KPFKC  C + FA+++    H+RRTH ++  S+
Sbjct:   310 ILRTHIRQHSGEKPFKCKHCGKAFASHAAHDSHMRRTHSKDKGST 354

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F6Y0P3 ZBTB16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL +++
Sbjct:   587 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQ 646

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   647 KHMKGHKPE 655

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q05516 ZBTB16 "Zinc finger and BTB domain-containing protein 16" [Homo sapiens (taxid:9606)]

 Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL +++
Sbjct:   587 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQ 646

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   647 KHMKGHKPE 655

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009880 "embryonic pattern specification" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0048133 "male germ-line stem cell division" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA;NAS

GO:0003677 "DNA binding" evidence=IDA;NAS

GO:0030097 "hemopoiesis" evidence=IDA;TAS

GO:0030099 "myeloid cell differentiation" evidence=TAS

GO:0006915 "apoptotic process" evidence=NAS

GO:0016607 "nuclear speck" evidence=IDA

GO:0007417 "central nervous system development" evidence=ISS

GO:0045638 "negative regulation of myeloid cell differentiation" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0001823 "mesonephros development" evidence=ISS

GO:0016605 "PML body" evidence=IDA

GO:0016604 "nuclear body" evidence=IDA

GO:0061036 "positive regulation of cartilage development" evidence=IDA

GO:0045778 "positive regulation of ossification" evidence=IDA

GO:0032332 "positive regulation of chondrocyte differentiation" evidence=IMP

GO:0045600 "positive regulation of fat cell differentiation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0051216 "cartilage development" evidence=IDA

GO:0017053 "transcriptional repressor complex" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

UNIPROTKB|Q5S3S9 Zbtb16 "Zinc finger and BTB domain containing 16" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL +++
Sbjct:   587 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQ 646

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   647 KHMKGHKPE 655

GO:0001823 "mesonephros development" evidence=ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISS

GO:0007417 "central nervous system development" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009880 "embryonic pattern specification" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0016604 "nuclear body" evidence=ISS

GO:0016605 "PML body" evidence=ISS

GO:0016607 "nuclear speck" evidence=ISS

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0030097 "hemopoiesis" evidence=ISS

GO:0032332 "positive regulation of chondrocyte differentiation" evidence=ISS

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0045600 "positive regulation of fat cell differentiation" evidence=ISS

GO:0045638 "negative regulation of myeloid cell differentiation" evidence=ISS

GO:0045778 "positive regulation of ossification" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0048133 "male germ-line stem cell division" evidence=IEA

GO:0051216 "cartilage development" evidence=ISS

GO:0061036 "positive regulation of cartilage development" evidence=ISS

UNIPROTKB|F1RU08 PRDM14 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 21/45 (46%), Positives = 32/45 (71%)

Query:    21 IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE-SCS 64
             I+R H R+H+G KPFKC  C + FA+++    H+RR+H ++ SCS
Sbjct:   503 ILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDSCS 547

GO:0048873 "homeostasis of number of cells within a tissue" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009566 "fertilization" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0001708 "cell fate specification" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1C9I5 ZBTB16 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query:    20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ---------ESCSSLKALR 70
             H +  HYR HTG KPF+C +C Q    YS   +HLR  +G          E C SL  ++
Sbjct:   579 HQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSTMQ 638

Query:    71 K-LRGPKPK 78
             K ++G KP+
Sbjct:   639 KHMKGHKPE 647

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001823 "mesonephros development" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009880 "embryonic pattern specification" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0032332 "positive regulation of chondrocyte differentiation" evidence=IEA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0035136 "forelimb morphogenesis" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0045600 "positive regulation of fat cell differentiation" evidence=IEA

GO:0045638 "negative regulation of myeloid cell differentiation" evidence=IEA

GO:0045778 "positive regulation of ossification" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0048133 "male germ-line stem cell division" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0061036 "positive regulation of cartilage development" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	89
KOG2462|consensus	279		99.86
KOG2462|consensus	279		99.85
KOG3623|consensus	1007		99.79
KOG3623|consensus	1007		99.52
KOG3576|consensus	267		99.5
KOG1074|consensus	958		99.45
KOG3576|consensus	267		99.26
KOG1074|consensus	958		99.16
PHA02768	55	hypothetical protein; Provisional	99.09
PHA02768	55	hypothetical protein; Provisional	99.02
PHA00733	128	hypothetical protein	98.96
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.92
KOG3608|consensus	467		98.83
KOG3608|consensus	467		98.77
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.74
PHA00616	44	hypothetical protein	98.68
PHA00616	44	hypothetical protein	98.53
PHA00733	128	hypothetical protein	98.52
PLN03086	567	PRLI-interacting factor K; Provisional	98.32
PLN03086	567	PRLI-interacting factor K; Provisional	98.26
KOG3993|consensus	500		98.11
PHA00732	79	hypothetical protein	98.05
PHA00732	79	hypothetical protein	98.02
KOG3993|consensus	500		97.86
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.84
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.8
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.65
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.55
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.38
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.17
smart00355	26	ZnF_C2H2 zinc finger.	97.17
PRK04860	160	hypothetical protein; Provisional	97.05
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.05
smart00355	26	ZnF_C2H2 zinc finger.	96.95
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.82
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.62
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.52
PRK04860	160	hypothetical protein; Provisional	96.45
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.45
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.1
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.42
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.03
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.68
COG5048	467	FOG: Zn-finger [General function prediction only]	92.61
KOG1146|consensus	1406		91.13
COG5048	467	FOG: Zn-finger [General function prediction only]	90.68
KOG2186|consensus	276		90.46
KOG4167|consensus	907		89.24
KOG2893|consensus	341		88.5
COG4049	65	Uncharacterized protein containing archaeal-type C	88.0
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	84.25
COG5189	423	SFP1 Putative transcriptional repressor regulating	80.33

>KOG2462|consensus

Probab=99.86  E-value=2.1e-23  Score=120.32  Aligned_cols=75  Identities=16%  Similarity=0.230  Sum_probs=38.5

Q ss_pred             CccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      |.+|+++|.....|..|.++|+  -|.+|.+||+.|..+..|+.|+|+|+|||||.|..|+|.|.|.++|..|+++|
T Consensus       164 C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  164 CKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             CCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhh
Confidence            4444444444444544544444  34455555555555555555555555555555555555555555555555444

>KOG2462|consensus

Probab=99.85  E-value=1.1e-22  Score=117.45  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=74.6

Q ss_pred             cccC-CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCC
Q psy13211          2 FFHG-KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPD   80 (89)
Q Consensus         2 ~~~~-~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~   80 (89)
                      ++|+ -..|.+||+.|.+..-|+.|.++|+|||||.|..|++.|...++|..|+++|.+.|+|+|..|+|.|..-+-|..
T Consensus       182 rTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnK  261 (279)
T KOG2462|consen  182 RTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNK  261 (279)
T ss_pred             hccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHH
Confidence            4566 668999999999999999999999999999999999999999999999999999999999999999988777666


Q ss_pred             Cc
Q psy13211         81 ST   82 (89)
Q Consensus        81 ~~   82 (89)
                      |.
T Consensus       262 H~  263 (279)
T KOG2462|consen  262 HS  263 (279)
T ss_pred             hh
Confidence            54

>KOG3623|consensus

Probab=99.79  E-value=6.7e-20  Score=117.02  Aligned_cols=80  Identities=18%  Similarity=0.390  Sum_probs=75.5

Q ss_pred             CCCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcch
Q psy13211          5 GKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRS   84 (89)
Q Consensus         5 ~~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~   84 (89)
                      |-|.|..|+++|...+.|..|.--|+|.+||+|.+|.+.|...-.|+.|.|.|.|||||+|++|+++|...+.|-.|+..
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhcc
Confidence            55779999999999999999999999999999999999999999999999999999999999999999999999877654

>KOG3623|consensus

Probab=99.52  E-value=9e-15  Score=94.10  Aligned_cols=78  Identities=15%  Similarity=0.212  Sum_probs=70.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcC-------------CCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTG-------------RKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLR   73 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~-------------~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~   73 (89)
                      +.|..|..+|.++..|..|+.+|..             .+-|+|.+|++.|...-.|..|+|+|.|||||.|+.|.++|.
T Consensus       241 fsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFS  320 (1007)
T KOG3623|consen  241 FSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFS  320 (1007)
T ss_pred             CcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccc
Confidence            4599999999999999999988742             245899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcch
Q psy13211         74 GPKPKPDSTRS   84 (89)
Q Consensus        74 ~~~~~~~~~~~   84 (89)
                      ..+.|--|+.+
T Consensus       321 HSGSySSHmSS  331 (1007)
T KOG3623|consen  321 HSGSYSSHMSS  331 (1007)
T ss_pred             cCCcccccccc
Confidence            99999888765

>KOG3576|consensus

Probab=99.50  E-value=1.4e-15  Score=85.36  Aligned_cols=77  Identities=12%  Similarity=0.129  Sum_probs=70.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      +.|.+|++.|....-|..|+..|...+.+.|..||+.|...-.|.+|.++|+|-+||+|..|++.|++.-.|..|.+
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45999999998888899999999999999999999999999999999999999999999999999999887765543

>KOG1074|consensus

Probab=99.45  E-value=2.6e-14  Score=92.82  Aligned_cols=79  Identities=23%  Similarity=0.354  Sum_probs=73.2

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC----CCCCch---HHHhhhcCCCCCCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ----ESCSSL---KALRKLRGPKPKPD   80 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e----k~~~c~---~~~~~~~~~~~~~~   80 (89)
                      .|..|.++.+..+.|+.|.++|+||+||+|.+|++.|....+|..|+.+|...    -++.|+   +|.+.|+....++.
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQ  686 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQ  686 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccc
Confidence            38999999999999999999999999999999999999999999999888754    467898   99999999999999


Q ss_pred             Ccchhh
Q psy13211         81 STRSLR   86 (89)
Q Consensus        81 ~~~~~~   86 (89)
                      |+++|.
T Consensus       687 hIriH~  692 (958)
T KOG1074|consen  687 HIRIHL  692 (958)
T ss_pred             eEEeec
Confidence            999986

>KOG3576|consensus

Probab=99.26  E-value=5e-13  Score=75.21  Aligned_cols=73  Identities=21%  Similarity=0.299  Sum_probs=59.8

Q ss_pred             CccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhc-----------CCCCCCchHHHhhhcCCCC
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH-----------GQESCSSLKALRKLRGPKP   77 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~-----------~ek~~~c~~~~~~~~~~~~   77 (89)
                      |+.||+.|.....|+.|+++|+|.+||.|..|++.|...-.|..|.+...           .++-|.|..|+-+-.....
T Consensus       148 ct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~  227 (267)
T KOG3576|consen  148 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEV  227 (267)
T ss_pred             HhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhH
Confidence            89999999999999999999999999999999999999999999976332           3477899998764444433


Q ss_pred             CCCC
Q psy13211         78 KPDS   81 (89)
Q Consensus        78 ~~~~   81 (89)
                      +..|
T Consensus       228 ~~~h  231 (267)
T KOG3576|consen  228 YYLH  231 (267)
T ss_pred             HHHH
Confidence            3333

>KOG1074|consensus

Probab=99.16  E-value=6.3e-12  Score=82.11  Aligned_cols=55  Identities=27%  Similarity=0.419  Sum_probs=48.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      -+|..|.++|...+.|+.|.++|+|++||+|.+||..|..+.+|.-|...|...-
T Consensus       354 hkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  354 HKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             chhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccC
Confidence            4689999999999999999999999999999999999999999998877776644

>PHA02768 hypothetical protein; Provisional

Probab=99.09  E-value=5.2e-11  Score=54.14  Aligned_cols=42  Identities=17%  Similarity=0.148  Sum_probs=28.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGA   50 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l   50 (89)
                      +.|++|++.|...++|..|+++|+  +|+.|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            467777777777777777777776  566777777766655544

>PHA02768 hypothetical protein; Provisional

Probab=99.02  E-value=9e-11  Score=53.36  Aligned_cols=44  Identities=14%  Similarity=0.275  Sum_probs=40.0

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKP   79 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~   79 (89)
                      .|.|+.||+.|...++|..|+++|+  ++++|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4789999999999999999999999  6999999999999777664

>PHA00733 hypothetical protein

Probab=98.96  E-value=4e-11  Score=63.92  Aligned_cols=75  Identities=15%  Similarity=0.267  Sum_probs=58.7

Q ss_pred             CccchhhcccHHHHHHH--HH---HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211          9 STDIQVRMFRIHIIRNH--YR---KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h--~~---~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      |.+|...|.....|..+  ..   .+.+++||.|..|+..|.....|..|++.+  +.+|.|..|++.|.....|..|+.
T Consensus        43 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         43 RAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             HHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHH
Confidence            88888777766555544  11   234578999999999999999999998865  468999999999999888877755


Q ss_pred             hh
Q psy13211         84 SL   85 (89)
Q Consensus        84 ~~   85 (89)
                      ..
T Consensus       121 ~~  122 (128)
T PHA00733        121 KK  122 (128)
T ss_pred             Hh
Confidence            43

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.92  E-value=6.7e-10  Score=43.55  Aligned_cols=25  Identities=48%  Similarity=1.012  Sum_probs=18.9

Q ss_pred             HHHHHHHHhcCCCCcccccchhhhc
Q psy13211         21 IIRNHYRKHTGRKPFKCVVCKQFFA   45 (89)
Q Consensus        21 ~l~~h~~~h~~~~p~~c~~c~~~f~   45 (89)
                      +|..|+++|+|++||.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4667788888888888888877764

...

>KOG3608|consensus

Probab=98.83  E-value=1.1e-09  Score=66.35  Aligned_cols=78  Identities=21%  Similarity=0.301  Sum_probs=68.7

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHh--cCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT--HGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h--~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      ++.-|-+.+..+..|..|.++|++++...|..||..|.....|..|.+..  ....+|.|..|-+.|..++.|..|..-|
T Consensus       181 ~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  181 NWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             cchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh
Confidence            46778899999999999999999999999999999999999999997744  4567999999999999998887776544

>KOG3608|consensus

Probab=98.77  E-value=1.8e-09  Score=65.47  Aligned_cols=78  Identities=13%  Similarity=0.213  Sum_probs=58.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHh-HhcCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      +.|..|.+.|.....|..|+..|.  ..|.|++|.......+.|..|++ .|...+||+|+.|...+..++.|..|+..|
T Consensus       238 fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  238 FQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc
Confidence            447777777777777777776664  36778888888888888888877 466778888888888888888887777665


Q ss_pred             h
Q psy13211         86 R   86 (89)
Q Consensus        86 ~   86 (89)
                      -
T Consensus       316 S  316 (467)
T KOG3608|consen  316 S  316 (467)
T ss_pred             c
Confidence            4

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.74  E-value=1.3e-09  Score=42.70  Aligned_cols=25  Identities=12%  Similarity=0.235  Sum_probs=22.7

Q ss_pred             hHHHHHhHhcCCCCCCchHHHhhhc
Q psy13211         49 GAYQHLRRTHGQESCSSLKALRKLR   73 (89)
Q Consensus        49 ~l~~h~~~h~~ek~~~c~~~~~~~~   73 (89)
                      +|..|+++|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4788999999999999999999875

...

>PHA00616 hypothetical protein

Probab=98.68  E-value=1.6e-08  Score=43.96  Aligned_cols=32  Identities=3%  Similarity=-0.104  Sum_probs=19.8

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      +.|..||+.|...++|..|++.|+|++++.|.
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            35666666666666666666666666666554

>PHA00616 hypothetical protein

Probab=98.53  E-value=1.1e-07  Score=41.41  Aligned_cols=33  Identities=21%  Similarity=0.425  Sum_probs=31.2

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      ||+|..||..|....++..|++.+++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999999999874

>PHA00733 hypothetical protein

Probab=98.52  E-value=1.7e-07  Score=50.06  Aligned_cols=50  Identities=16%  Similarity=0.246  Sum_probs=43.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      +.|.+|++.|.....|..|++.+  +.++.|..|++.|.....|..|+....
T Consensus        74 y~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         74 YVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             ccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            46999999999999999999876  357999999999999999998876443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.32  E-value=4.4e-07  Score=58.58  Aligned_cols=61  Identities=11%  Similarity=0.130  Sum_probs=48.8

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhc
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLR   73 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~   73 (89)
                      .|..|++.|. ...|..|+.+++  .|+.|. |+..+ ....|..|+..+.+++++.|..|+..+.
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            5888888885 567888888874  688888 88644 5678888888888889999998888775

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.26  E-value=7.5e-07  Score=57.53  Aligned_cols=67  Identities=13%  Similarity=0.203  Sum_probs=55.0

Q ss_pred             cCCCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcC----------hhhHHHHHhHhcCCCCCCchHHHhhhc
Q psy13211          4 HGKTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFAT----------YSGAYQHLRRTHGQESCSSLKALRKLR   73 (89)
Q Consensus         4 ~~~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~----------~~~l~~h~~~h~~ek~~~c~~~~~~~~   73 (89)
                      |....|. |+..+ ....|..|+.+|.+.+|+.|..|+..+..          ...|..|... .|.+++.|..|++.+.
T Consensus       476 Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt~~C~~Cgk~Vr  552 (567)
T PLN03086        476 HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRTAPCDSCGRSVM  552 (567)
T ss_pred             CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCCcceEccccCCeee
Confidence            6566798 99755 66789999999999999999999988842          3478888776 5999999999988665

>KOG3993|consensus

Probab=98.11  E-value=1.6e-06  Score=53.95  Aligned_cols=27  Identities=15%  Similarity=0.110  Sum_probs=23.5

Q ss_pred             cCCCCCccchhhcccHHHHHHHHHHhc
Q psy13211          4 HGKTKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         4 ~~~~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      |-.|+|.+|+++|....||..|.++|-
T Consensus       293 ~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  293 HVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             EeeecCCcccccccCchhhhhhhcccC
Confidence            567899999999999999999988873

>PHA00732 hypothetical protein

Probab=98.05  E-value=1.1e-06  Score=43.15  Aligned_cols=44  Identities=25%  Similarity=0.421  Sum_probs=34.6

Q ss_pred             CCCccchhhcccHHHHHHHHHH-hcCCCCcccccchhhhcChhhHHHHHhH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK-HTGRKPFKCVVCKQFFATYSGAYQHLRR   56 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~-h~~~~p~~c~~c~~~f~~~~~l~~h~~~   56 (89)
                      ++|.+|++.|....+|..|++. |.   ++.|..|++.|..   +..|.+.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhcc
Confidence            4699999999999999999874 55   3579999998873   6666644

>PHA00732 hypothetical protein

Probab=98.02  E-value=4e-06  Score=41.24  Aligned_cols=44  Identities=23%  Similarity=0.219  Sum_probs=35.8

Q ss_pred             CcccccchhhhcChhhHHHHHhH-hcCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRR-THGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~-h~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      ||.|..|+..|.....|..|++. |.   ++.|..|++.|.   .+..|..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhc
Confidence            68899999999999999999874 55   468999999987   3555553

>KOG3993|consensus

Probab=97.86  E-value=5.6e-07  Score=55.92  Aligned_cols=81  Identities=12%  Similarity=0.136  Sum_probs=62.8

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhc--------C-------------------
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH--------G-------------------   59 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~--------~-------------------   59 (89)
                      +=|..|...|-....|.+|.-...--.-|.|.+|++.|.-.++|..|.+=|.        +                   
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            3477888888887788888643333346899999999999999999976332        1                   


Q ss_pred             ------CCCCCchHHHhhhcCCCCCCCCcchhhh
Q psy13211         60 ------QESCSSLKALRKLRGPKPKPDSTRSLRK   87 (89)
Q Consensus        60 ------ek~~~c~~~~~~~~~~~~~~~~~~~~~~   87 (89)
                            +-.|.|..|++.|.+-.-|..|+.+|++
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                  1247899999999999999999887765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.84  E-value=8.4e-06  Score=30.60  Aligned_cols=21  Identities=14%  Similarity=0.131  Sum_probs=13.2

Q ss_pred             CCccchhhcccHHHHHHHHHH
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRK   28 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~   28 (89)
                      .|.+|++.|.....|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHhH
Confidence            456666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.80  E-value=0.00011  Score=33.44  Aligned_cols=49  Identities=16%  Similarity=0.279  Sum_probs=35.9

Q ss_pred             CCCCccchhhcccHHHHHHHHHH-hcCC-CCcccccchhhhcChhhHHHHHhHh
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRK-HTGR-KPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~-h~~~-~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      +++|+.|++. .....|..|... |..+ +.+.|++|...+.  .+|..|+..+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            6889999994 556789999665 5543 5689999987544  4777787654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.65  E-value=2.7e-05  Score=29.15  Aligned_cols=23  Identities=35%  Similarity=0.817  Sum_probs=20.3

Q ss_pred             cccccchhhhcChhhHHHHHhHh
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.55  E-value=3.5e-05  Score=30.01  Aligned_cols=24  Identities=33%  Similarity=0.712  Sum_probs=14.0

Q ss_pred             CcccccchhhhcChhhHHHHHhHh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      ||.|..|+..|.....|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355666666666666666665544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.38  E-value=0.00013  Score=27.14  Aligned_cols=22  Identities=18%  Similarity=0.182  Sum_probs=12.7

Q ss_pred             CCccchhhcccHHHHHHHHHHh
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      .|.+|+..|.....|..|+.++
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHhh
Confidence            4666666666666666666554

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.17  E-value=0.00029  Score=26.16  Aligned_cols=23  Identities=35%  Similarity=0.729  Sum_probs=18.6

Q ss_pred             cccccchhhhcChhhHHHHHhHh
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      |.|..|+..|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            57999999999999999998765

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.17  E-value=0.00071  Score=25.40  Aligned_cols=22  Identities=14%  Similarity=0.271  Sum_probs=13.6

Q ss_pred             CCccchhhcccHHHHHHHHHHh
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      .|.+|++.|.....+..|+..|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4666666666666666666544

>PRK04860 hypothetical protein; Provisional

Probab=97.05  E-value=0.00015  Score=40.22  Aligned_cols=38  Identities=18%  Similarity=0.359  Sum_probs=31.5

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGP   75 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~   75 (89)
                      +|.|. |+.   ....+..|.++++++++|.|..|++.+...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            68897 876   666788899999999999999998877643

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.05  E-value=0.00016  Score=28.07  Aligned_cols=24  Identities=17%  Similarity=0.290  Sum_probs=21.0

Q ss_pred             CCCccchhhcccHHHHHHHHHHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      +.|.+|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            468999999999999999987664

>smart00355 ZnF_C2H2 zinc finger

Probab=96.95  E-value=0.0011  Score=24.84  Aligned_cols=24  Identities=25%  Similarity=0.652  Sum_probs=20.5

Q ss_pred             cccccchhhhcChhhHHHHHhHhc
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      +.|..|+..|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            468899999999999999988654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.82  E-value=0.0013  Score=29.44  Aligned_cols=33  Identities=18%  Similarity=0.402  Sum_probs=22.3

Q ss_pred             cCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         30 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        30 ~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      ..+.|..|++|+..+....+|.+|+.+..+.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            356688899999999999999999888777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.62  E-value=0.00059  Score=31.06  Aligned_cols=49  Identities=12%  Similarity=0.146  Sum_probs=34.2

Q ss_pred             CcccccchhhhcChhhHHHHHhH-hcCC-CCCCchHHHhhhcCCCCCCCCcchh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRR-THGQ-ESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~-h~~e-k~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      .|.|+.|++. .....|..|... |..+ +.+.|+.|...+..  ++..|+...
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVTD--NLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhhh--HHHHHHHHh
Confidence            4789999994 456778899664 4443 57899999876543  665665543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.52  E-value=0.0029  Score=28.38  Aligned_cols=27  Identities=15%  Similarity=0.126  Sum_probs=20.6

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKP   34 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p   34 (89)
                      +|++|+..+.+..+|..|+..+.+.+|
T Consensus        26 tCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   26 TCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             E-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCcchhhccchhhHHHHHHHHhcccC
Confidence            399999999999999999988877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.45  E-value=0.001  Score=37.03  Aligned_cols=37  Identities=19%  Similarity=0.345  Sum_probs=30.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcCh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATY   47 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~   47 (89)
                      +.|. |+.   ....+..|.+++.++++|.|..|+..+...
T Consensus       120 Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        120 YRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            5576 876   455688999999999999999999877653

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.45  E-value=0.0021  Score=32.38  Aligned_cols=49  Identities=18%  Similarity=0.392  Sum_probs=17.9

Q ss_pred             CccchhhcccHHHHHHHHHHhcCC-----------------------CCcccccchhhhcChhhHHHHHhHh
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGR-----------------------KPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~-----------------------~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      |..|+..|.....|..|+....+.                       ..+.|..|+..|.....|..|++.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            778888888888888887532220                       1367888888888888888887753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.10  E-value=0.0044  Score=38.04  Aligned_cols=53  Identities=15%  Similarity=0.309  Sum_probs=41.0

Q ss_pred             CCCCccccc--chhhhcChhhHHHHHhH-h------------------cCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211         31 GRKPFKCVV--CKQFFATYSGAYQHLRR-T------------------HGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus        31 ~~~p~~c~~--c~~~f~~~~~l~~h~~~-h------------------~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      +++||.|.+  |.+.+.....|.-|+.. |                  ...|||+|..|.++...-+.|+-|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            458999976  88999998888887542 2                  12489999999999888777776643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.02  E-value=0.0034  Score=23.68  Aligned_cols=20  Identities=35%  Similarity=0.720  Sum_probs=10.2

Q ss_pred             ccccchhhhcChhhHHHHHh
Q psy13211         36 KCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        36 ~c~~c~~~f~~~~~l~~h~~   55 (89)
                      .|.+|...|.....+..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            35555555555555555543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.01  E-value=0.016  Score=21.55  Aligned_cols=20  Identities=10%  Similarity=0.173  Sum_probs=9.8

Q ss_pred             CCccchhhcccHHHHHHHHHH
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRK   28 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~   28 (89)
                      +|+.|+.... ...|..|+..
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            4555665554 4555556554

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.42  E-value=0.0094  Score=23.01  Aligned_cols=19  Identities=26%  Similarity=0.705  Sum_probs=9.3

Q ss_pred             ccccchhhhcChhhHHHHH
Q psy13211         36 KCVVCKQFFATYSGAYQHL   54 (89)
Q Consensus        36 ~c~~c~~~f~~~~~l~~h~   54 (89)
                      .|..|++.|.....+..|+
T Consensus         3 ~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    3 YCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             BBTTTTBBBSSHHHHHCCT
T ss_pred             CcccCCCCcCCHHHHHHHH
Confidence            3555555555555444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.03  E-value=0.065  Score=20.37  Aligned_cols=20  Identities=5%  Similarity=0.031  Sum_probs=12.1

Q ss_pred             CCCccchhhcccHHHHHHHHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR   27 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~   27 (89)
                      .+|..|++.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3577777777 3445666653

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.68  E-value=0.084  Score=21.34  Aligned_cols=19  Identities=11%  Similarity=-0.024  Sum_probs=9.3

Q ss_pred             CCccchhhcccHHHHHHHH
Q psy13211          8 KSTDIQVRMFRIHIIRNHY   26 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~   26 (89)
                      -|..|+..|.....+..|+
T Consensus         5 ~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        5 YCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             EccccCCccCCHHHHHHHH
Confidence            3555555555444444443

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.61  E-value=0.014  Score=36.32  Aligned_cols=59  Identities=24%  Similarity=0.503  Sum_probs=43.2

Q ss_pred             CCCccchhhcccHHHHHHHHH--HhcCC--CCcccc--cchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR--KHTGR--KPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~--~h~~~--~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      ..+..|...|.....+..|.+  .|.++  +|+.|.  .|+..|.....+..|...+.+-.++.+
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            456777777777777777777  67777  777777  677888777777777777776665554

>KOG1146|consensus

Probab=91.13  E-value=0.19  Score=36.46  Aligned_cols=54  Identities=22%  Similarity=0.314  Sum_probs=43.2

Q ss_pred             cccCCCCCccchhhcccHHHHHHHHHH-hc------------------------CCCCcccccchhhhcChhhHHHHHh
Q psy13211          2 FFHGKTKSTDIQVRMFRIHIIRNHYRK-HT------------------------GRKPFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus         2 ~~~~~~~~~~c~~~f~~~~~l~~h~~~-h~------------------------~~~p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      +|--+.+|..|+..|.....|..|+++ |.                        +.+||.|..|...+....+|..|++
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            444678899999999999999999987 21                        1247888889888888888888876

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.68  E-value=0.059  Score=33.55  Aligned_cols=56  Identities=18%  Similarity=0.156  Sum_probs=49.0

Q ss_pred             CCcccccchhhhcChhhHHHHHh--HhcCC--CCCCch--HHHhhhcCCCCCCCCcchhhhc
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLR--RTHGQ--ESCSSL--KALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~--~h~~e--k~~~c~--~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      .++.|..|...|.....+..|.+  .|.++  +++.|.  .|++.|.....+..|...++..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            36788889999999999999999  89999  999999  7999999999888888777653

>KOG2186|consensus

Probab=90.46  E-value=0.073  Score=31.80  Aligned_cols=46  Identities=13%  Similarity=0.251  Sum_probs=31.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      +.|.+||....-. .+-.|+..-++ .-|.|..|+..|.. .....|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            5688888766443 46667766555 56888889988877 44555654

>KOG4167|consensus

Probab=89.24  E-value=0.15  Score=34.93  Aligned_cols=26  Identities=19%  Similarity=0.317  Sum_probs=22.8

Q ss_pred             CCCCCccchhhcccHHHHHHHHHHhc
Q psy13211          5 GKTKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         5 ~~~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      |-++|.+|+++|.....+..||++|.
T Consensus       791 giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  791 GIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             ceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            45679999999999889999999885

>KOG2893|consensus

Probab=88.50  E-value=0.18  Score=30.11  Aligned_cols=41  Identities=22%  Similarity=0.315  Sum_probs=28.9

Q ss_pred             CccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHH
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH   53 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h   53 (89)
                      |=.|++.|....-|.+|++.    +.|+|.+|.+..-+...|..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            77889999888888888764    678899996444344444444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.00  E-value=0.035  Score=25.40  Aligned_cols=28  Identities=18%  Similarity=0.488  Sum_probs=19.7

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHhH
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLRR   56 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~~   56 (89)
                      ..||.-+.|+.|+..|........|...
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            4566667788888888777777766543

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=84.25  E-value=0.25  Score=20.02  Aligned_cols=9  Identities=44%  Similarity=1.206  Sum_probs=5.1

Q ss_pred             CCcccccch
Q psy13211         33 KPFKCVVCK   41 (89)
Q Consensus        33 ~p~~c~~c~   41 (89)
                      .|+.|++|+
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            455666664

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=80.33  E-value=0.71  Score=28.82  Aligned_cols=47  Identities=21%  Similarity=0.424  Sum_probs=34.0

Q ss_pred             CCcc--chhhcccHHHHHHHHHH-h------------------cCCCCcccccchhhhcChhhHHHHH
Q psy13211          8 KSTD--IQVRMFRIHIIRNHYRK-H------------------TGRKPFKCVVCKQFFATYSGAYQHL   54 (89)
Q Consensus         8 ~~~~--c~~~f~~~~~l~~h~~~-h------------------~~~~p~~c~~c~~~f~~~~~l~~h~   54 (89)
                      +|.+  |.+.|.....|+-|+.- |                  ...+||.|.+|++.+.....|.-|+
T Consensus       351 kCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         351 KCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            4544  67888877777777642 2                  1248999999999998888777663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	89
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-04

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 22 IRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 61
          +  H R HTG+KPF+C +C + F+ ++G  QH+R   G++
Sbjct: 22 LDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	89
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-04

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 42.6 bits (101), Expect = 4e-07
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          + H + H G    K   C     T++   +H+   H
Sbjct: 50 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.2 bits (90), Expect = 1e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 20 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          H+ R HYR HT  KP+ C +C + F       +H ++ H
Sbjct: 17 HLKR-HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG+KP++C+ C + F   +   +H R  H
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 2e-05
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS 65
          R H R H   +PFKC  C       S   +H+++ HG  S  S
Sbjct: 26 RIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 23  RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
           + H + H G    K   C     T++   +H+   H
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     +G KPFKC  C + F T S  Y H +R+H
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
               TG++P++C+ C + F T S    H RR+H
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +      G +  +C  C +FF   S   QH RR H
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 3e-04
 Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 4/45 (8%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE---SCSS 65
          +     TG  PF C  C + F   +    H ++ H  E     SS
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIH-QKIHTGERPSGPSS 45

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 23  RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
           R H   HTG  P+KC  C Q F        H+ + H
Sbjct: 83  RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     +  KP+KC  C + +        H +R H
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KPFKC +C + F   S   +H    H
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRR 56
          HYRKHTG +PF+C  C + F+       H++R
Sbjct: 56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.6 bits (78), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
               TG KPF C+ C + F+ + G  QH RR H
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.7 bits (78), Expect = 6e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     +G KPFKC  C + F   S  + H +R H
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.7 bits (78), Expect = 6e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
                G K +KC VC + F+  S    H +R H
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.7 bits (78), Expect = 6e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KP+KC+ C + F   S   QH +R H
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 33.6 bits (78), Expect = 6e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KPFKCV C + F+  S    H  + H
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 33.7 bits (78), Expect = 6e-04
 Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KP+KC  C + F      Y H    H
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 34.0 bits (79), Expect = 6e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG 59
           +  R H+G KP++C +C   F        H+ + H 
Sbjct: 4  GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 40

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)

Query: 23 RNHYRKHTG--RKPFKCVVCKQFFATYSGAYQHLRRTHGQE 61
          + H  +        F C  C    A  S    HLR+ H   
Sbjct: 32 KMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 34.0 bits (79), Expect = 6e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
             +   R+ +KC  C + F+  S   +H RRTH
Sbjct: 9  SEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTH 41

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.3 bits (77), Expect = 7e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KP+KC  C + F   S   +H +R H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.3 bits (77), Expect = 7e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +     TG KP+KC  C + F   SG + H +++H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.2 bits (77), Expect = 7e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
               TG +P+ C VC + F   S   +H ++ H
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.3 bits (77), Expect = 8e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
          +      G KP+ C  C + F++ S    H  RTH
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 58
            H R HTG KPF C +C + FA      +H R   
Sbjct: 20 TTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQ 54

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.2 bits (77), Expect = 9e-04
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE---SCSS 65
          +     TG KPF+C  C++ F T S    H +RTH  E     SS
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGEKPSGPSS 45

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 25 HYRKHTG--RKPFKCVVCKQFFATYSGAYQHLRRTH 58
          H R H G   KP+ C  C + F+       H+++ H
Sbjct: 54 HVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRR 56
          HYRKHTG KPF+C VC + F+       H++R
Sbjct: 66 HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.77
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.73
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.71
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.7
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.7
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.66
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.64
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.58
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.57
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.54
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.48
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.47
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.46
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.46
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.46
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.45
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.44
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.44
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.43
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.42
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.39
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.39
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.39
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.38
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.38
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.38
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.37
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.37
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.37
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.35
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.34
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.33
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.33
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.31
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.3
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.29
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.26
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.25
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.25
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.21
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.12
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.04
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.01
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.01
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.99
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.97
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.95
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.92
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.91
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.87
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.84
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.83
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.82
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.81
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.79
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.77
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.75
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.73
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.72
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.69
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.64
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.62
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.6
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.57
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.57
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.55
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.54
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.54
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.54
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.54
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.5
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.47
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.41
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.4
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.75
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.37
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.34
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.32
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.27
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.27
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.2
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.19
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.18
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.17
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.46
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.15
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.43
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.04
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.0
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.0
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.97
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.96
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.94
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.92
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.89
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.79
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.14
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.21
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.67
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.12
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.41
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.71
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.01
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.72
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	87.54
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.83

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=3.2e-24  Score=114.31  Aligned_cols=82  Identities=13%  Similarity=0.216  Sum_probs=77.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|+++|....+|..|+++|++++||.|..|+..|.....|..|+++|++++||.|+.|++.|.....|..|+++++
T Consensus        23 y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh  102 (133)
T 2lt7_A           23 YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVH  102 (133)
T ss_dssp             EEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHT
T ss_pred             eECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhc
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999988888776


Q ss_pred             hc
Q psy13211         87 KK   88 (89)
Q Consensus        87 ~~   88 (89)
                      .+
T Consensus       103 ~~  104 (133)
T 2lt7_A          103 SQ  104 (133)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=8e-22  Score=100.93  Aligned_cols=83  Identities=11%  Similarity=0.119  Sum_probs=78.7

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++|.
T Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999998887


Q ss_pred             hcC
Q psy13211         87 KKK   89 (89)
Q Consensus        87 ~~~   89 (89)
                      .++
T Consensus        98 ~~~  100 (106)
T 2ee8_A           98 QTS  100 (106)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=5.7e-22  Score=99.85  Aligned_cols=84  Identities=24%  Similarity=0.255  Sum_probs=79.1

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      .+.|.+|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++|
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   87 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH   87 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTC
T ss_pred             CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHh
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hhcC
Q psy13211         86 RKKK   89 (89)
Q Consensus        86 ~~~~   89 (89)
                      ..++
T Consensus        88 ~~~~   91 (96)
T 2dmd_A           88 TGDS   91 (96)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            7653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=7.2e-22  Score=96.82  Aligned_cols=80  Identities=14%  Similarity=0.181  Sum_probs=76.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999988888775

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=1.1e-21  Score=97.79  Aligned_cols=83  Identities=23%  Similarity=0.387  Sum_probs=77.4

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcch
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRS   84 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~   84 (89)
                      +.|.  .|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++
T Consensus         5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            4577  69999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcC
Q psy13211         85 LRKKK   89 (89)
Q Consensus        85 ~~~~~   89 (89)
                      |..++
T Consensus        85 H~~~k   89 (90)
T 1a1h_A           85 HLRQK   89 (90)
T ss_dssp             GGC--
T ss_pred             hcccC
Confidence            98764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=5.4e-20  Score=85.73  Aligned_cols=55  Identities=20%  Similarity=0.266  Sum_probs=49.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +.|.+|+++|....+|..|+++|+|++||.|.+|++.|.....|..|+++|+||.
T Consensus         5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             ccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4699999999999999999999999999999999999999999999999999874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=2.1e-20  Score=97.93  Aligned_cols=88  Identities=20%  Similarity=0.307  Sum_probs=78.1

Q ss_pred             cccCC--CCCccchhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCch--HHHhhhcCC
Q psy13211          2 FFHGK--TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSL--KALRKLRGP   75 (89)
Q Consensus         2 ~~~~~--~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~--~~~~~~~~~   75 (89)
                      .+||.  +.|.+|++.|.....|..|+.+|.+++||.|..  |+..|.....|..|+++|.++++|.|.  .|++.|...
T Consensus        28 ~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  107 (124)
T 1ubd_C           28 HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS  107 (124)
T ss_dssp             GGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSST
T ss_pred             HHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCH
Confidence            35543  459999999999999999999999999999986  999999999999999999999999995  699999999


Q ss_pred             CCCCCCcchhhhcC
Q psy13211         76 KPKPDSTRSLRKKK   89 (89)
Q Consensus        76 ~~~~~~~~~~~~~~   89 (89)
                      ..|..|+++|..++
T Consensus       108 ~~L~~H~~~H~~~k  121 (124)
T 1ubd_C          108 TNLKSHILTHAKAK  121 (124)
T ss_dssp             TTTHHHHHHHC---
T ss_pred             HHHHHHHHHHcccc
Confidence            99999999998764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.77  E-value=3.2e-21  Score=89.90  Aligned_cols=59  Identities=20%  Similarity=0.319  Sum_probs=55.9

Q ss_pred             CCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         31 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        31 ~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .|+||.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|+++|+.|+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37999999999999999999999999999999999999999999999999999998764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.77  E-value=9.9e-21  Score=105.45  Aligned_cols=83  Identities=22%  Similarity=0.350  Sum_probs=67.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+++|.++++|.|..|++.|.....|..|+++|.
T Consensus       106 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcC
Confidence            45888888888888888888888888888888888888888888888888888888888888888888888888888877


Q ss_pred             hcC
Q psy13211         87 KKK   89 (89)
Q Consensus        87 ~~~   89 (89)
                      .++
T Consensus       186 ~~k  188 (190)
T 2i13_A          186 GKK  188 (190)
T ss_dssp             ---
T ss_pred             CCC
Confidence            654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.2e-20  Score=97.18  Aligned_cols=80  Identities=15%  Similarity=0.184  Sum_probs=75.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.| +|++.|.....|..|+++|.++++|.|..|+..|.....|..|+++|.++++|.|..|++.|.....|..|++++.
T Consensus        11 ~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             Eec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcc
Confidence            459 8999999999999999999999999999999999999999999999999999999999999999999999988776


Q ss_pred             h
Q psy13211         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      +
T Consensus        90 ~   90 (110)
T 2csh_A           90 K   90 (110)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.3e-20  Score=93.59  Aligned_cols=81  Identities=20%  Similarity=0.293  Sum_probs=75.6

Q ss_pred             CCCCCcc--chhhcccHHHHHHHHHHhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCC
Q psy13211          5 GKTKSTD--IQVRMFRIHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPD   80 (89)
Q Consensus         5 ~~~~~~~--c~~~f~~~~~l~~h~~~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~   80 (89)
                      +.+.|..  |++.|.....|..|+++|.+++||.|.  .|+..|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3567888  999999999999999999999999997  699999999999999999999999999999999999999988


Q ss_pred             Ccchh
Q psy13211         81 STRSL   85 (89)
Q Consensus        81 ~~~~~   85 (89)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            88876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.2e-20  Score=93.83  Aligned_cols=81  Identities=16%  Similarity=0.239  Sum_probs=75.0

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC--CCCCchHHHhhhcCCCCCCCCcc-
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ--ESCSSLKALRKLRGPKPKPDSTR-   83 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e--k~~~c~~~~~~~~~~~~~~~~~~-   83 (89)
                      +.|.+|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.++  ++|.|..|++.|.....|..|++ 
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHH
Confidence            569999999999999999999999999999999999999999999999999997  99999999999999999988875 


Q ss_pred             hhhh
Q psy13211         84 SLRK   87 (89)
Q Consensus        84 ~~~~   87 (89)
                      .|..
T Consensus        88 ~H~~   91 (95)
T 2yt9_A           88 VHSG   91 (95)
T ss_dssp             TSCC
T ss_pred             hcCC
Confidence            5543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=7.9e-20  Score=98.91  Aligned_cols=83  Identities=22%  Similarity=0.312  Sum_probs=77.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcCCCCCCCCc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRGPKPKPDST   82 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~~~~   82 (89)
                      +.|.+|++.|.....|..|+++|.++++|.|..  |+..|.....|..|+++|.++++|.|..  |++.|.....|..|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence            579999999999999999999999999999988  9999999999999999999999999996  999999999999999


Q ss_pred             chhhhcC
Q psy13211         83 RSLRKKK   89 (89)
Q Consensus        83 ~~~~~~~   89 (89)
                      ++|..++
T Consensus       143 ~~H~~~k  149 (155)
T 2rpc_A          143 HVHTSDK  149 (155)
T ss_dssp             TTTTSCC
T ss_pred             HHhcCCC
Confidence            9988764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.73  E-value=1.5e-19  Score=93.91  Aligned_cols=80  Identities=26%  Similarity=0.434  Sum_probs=44.9

Q ss_pred             CCcc--chhhcccHHHHHHHHHHhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211          8 KSTD--IQVRMFRIHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus         8 ~~~~--c~~~f~~~~~l~~h~~~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      .|.+  |++.|.....|..|+++|.+++||.|.  .|+..|.....|..|++.|.++++|.|..|++.|.....|..|++
T Consensus         8 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (119)
T 2jp9_A            8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR   87 (119)
T ss_dssp             CCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             eCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHH
Confidence            4543  555555555555555555555555555  455555555555555555555555555555555555555555555


Q ss_pred             hhhh
Q psy13211         84 SLRK   87 (89)
Q Consensus        84 ~~~~   87 (89)
                      +|..
T Consensus        88 ~h~~   91 (119)
T 2jp9_A           88 THTG   91 (119)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            5443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.72  E-value=7.3e-20  Score=95.11  Aligned_cols=79  Identities=24%  Similarity=0.407  Sum_probs=73.5

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc--hHHHhhhcCCCCCCCCc
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS--LKALRKLRGPKPKPDST   82 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c--~~~~~~~~~~~~~~~~~   82 (89)
                      +.|.  +|++.|.....|..|+++|.++++|.|..|+..|.....|..|+++|.++++|.|  +.|++.|.....|..|+
T Consensus        37 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  116 (119)
T 2jp9_A           37 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH  116 (119)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHH
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHH
Confidence            4588  7999999999999999999999999999999999999999999999999999999  89999999988888777


Q ss_pred             chh
Q psy13211         83 RSL   85 (89)
Q Consensus        83 ~~~   85 (89)
                      ++|
T Consensus       117 ~~H  119 (119)
T 2jp9_A          117 NMH  119 (119)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=1.6e-19  Score=91.32  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=74.5

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCc
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDST   82 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~   82 (89)
                      +.|..  |++.|.....|..|+++|.++++|.|.  .|+..|.....|..|++.|.++++|.|..|++.|.....|..|+
T Consensus        16 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   95 (100)
T 2ebt_A           16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM   95 (100)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHH
T ss_pred             eEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHH
Confidence            34775  999999999999999999999999996  69999999999999999999999999999999999999999998


Q ss_pred             chhh
Q psy13211         83 RSLR   86 (89)
Q Consensus        83 ~~~~   86 (89)
                      ++|+
T Consensus        96 ~~H~   99 (100)
T 2ebt_A           96 KRHQ   99 (100)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            8875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.2e-19  Score=92.99  Aligned_cols=79  Identities=10%  Similarity=0.070  Sum_probs=72.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcc-hh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTR-SL   85 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~-~~   85 (89)
                      ++|.+|++.|.....|..|+++|.  +||.|..|+..|.....|..|+. |.++++|.|..|++.|.....|..|++ .|
T Consensus        17 ~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           17 YQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVH   93 (107)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             eECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHc
Confidence            569999999999999999999984  69999999999999999999985 999999999999999999999988886 66


Q ss_pred             hhc
Q psy13211         86 RKK   88 (89)
Q Consensus        86 ~~~   88 (89)
                      ..+
T Consensus        94 ~~~   96 (107)
T 1wjp_A           94 NQN   96 (107)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.4e-18  Score=83.74  Aligned_cols=65  Identities=12%  Similarity=0.159  Sum_probs=60.9

Q ss_pred             CCc--cchhhcccHHHHHHHHH-HhcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCchHHHhhh
Q psy13211          8 KST--DIQVRMFRIHIIRNHYR-KHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSLKALRKL   72 (89)
Q Consensus         8 ~~~--~c~~~f~~~~~l~~h~~-~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~   72 (89)
                      +|.  +|++.|.....|..|++ .|.+++||.|..  |++.|.....|..|+++|++++||.|..|++.|
T Consensus         9 ~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             cCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            455  49999999999999999 799999999998  999999999999999999999999999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=5.7e-18  Score=82.19  Aligned_cols=59  Identities=29%  Similarity=0.423  Sum_probs=56.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|.+|+..|.....|..|+++|++++||.|
T Consensus        19 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             EECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56999999999999999999999999999999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.71  E-value=2.6e-19  Score=99.67  Aligned_cols=82  Identities=20%  Similarity=0.325  Sum_probs=57.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|++.|.....|..|+.+|.++++|.|..|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++|.
T Consensus        78 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A           78 YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34667777777777777777777777777777777777777777777777777777777777777777777766666665


Q ss_pred             hc
Q psy13211         87 KK   88 (89)
Q Consensus        87 ~~   88 (89)
                      .+
T Consensus       158 ~~  159 (190)
T 2i13_A          158 GE  159 (190)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=5.1e-19  Score=92.41  Aligned_cols=77  Identities=14%  Similarity=0.210  Sum_probs=45.8

Q ss_pred             CCCccchhhcccHHHHHHHHHH---hcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK---HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~---h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      +.|.+|++.|.....|..|+..   +.++++|.|..|+..|.....|..|+++|.+++||.|..|++.|.....|..|++
T Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           36 FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            3456666666666566666553   3455566666666666666666666666666666666666666666655555544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.70  E-value=3.5e-18  Score=90.94  Aligned_cols=76  Identities=14%  Similarity=0.213  Sum_probs=64.8

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC------CCchHHHhhhcCCCCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES------CSSLKALRKLRGPKPKPD   80 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~------~~c~~~~~~~~~~~~~~~   80 (89)
                      ++|.+|+++|.....|..|+++|++++||.|.+|+..|.....|..|++.+++++|      |+|..|++.|       .
T Consensus        51 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~-------~  123 (133)
T 2lt7_A           51 YPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQ-------I  123 (133)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSC-------C
T ss_pred             eeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchh-------h
Confidence            46999999999999999999999999999999999999999999999999987755      5667776544       3


Q ss_pred             CcchhhhcC
Q psy13211         81 STRSLRKKK   89 (89)
Q Consensus        81 ~~~~~~~~~   89 (89)
                      +.++|+.+|
T Consensus       124 ~~~~h~~ek  132 (133)
T 2lt7_A          124 RQYAYLSDR  132 (133)
T ss_dssp             CCCHHHHCC
T ss_pred             hcccccccC
Confidence            566666654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.70  E-value=3.7e-17  Score=78.73  Aligned_cols=58  Identities=24%  Similarity=0.398  Sum_probs=54.8

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESC   63 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~   63 (89)
                      .+.|.+|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|++++||
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3679999999999999999999999999999999999999999999999999999986

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=1.7e-19  Score=89.63  Aligned_cols=79  Identities=23%  Similarity=0.255  Sum_probs=72.7

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|++.+.+ .+|.|..|++.|.....|..|++...
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999998885 88999999999998888887776554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.7e-18  Score=90.43  Aligned_cols=83  Identities=18%  Similarity=0.289  Sum_probs=76.7

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhH---hcCCCCCCchHHHhhhcCCCCCCCCc
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRR---THGQESCSSLKALRKLRGPKPKPDST   82 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~---h~~ek~~~c~~~~~~~~~~~~~~~~~   82 (89)
                      .+.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+..   +.++++|.|..|++.|.....|..|+
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM   86 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence            467999999999999999999999999999999999999999999999885   57899999999999999999999998


Q ss_pred             chhhhc
Q psy13211         83 RSLRKK   88 (89)
Q Consensus        83 ~~~~~~   88 (89)
                      ++|..+
T Consensus        87 ~~h~~~   92 (124)
T 2dlq_A           87 VSHTGE   92 (124)
T ss_dssp             HHHSSS
T ss_pred             HHcCCC
Confidence            888654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=2.3e-19  Score=92.91  Aligned_cols=81  Identities=5%  Similarity=-0.030  Sum_probs=72.6

Q ss_pred             CCCccchhhcccHHHHHHHHHH--hcCCCCcc-cccchhhh--cChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK--HTGRKPFK-CVVCKQFF--ATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDS   81 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~--h~~~~p~~-c~~c~~~f--~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~   81 (89)
                      +.|.+|++.|.....|..|+++  |.+++++. |..|+..|  .....|..|+++|.+++||.|..|++.|.....|..|
T Consensus        20 ~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H   99 (115)
T 2dmi_A           20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH   99 (115)
T ss_dssp             EEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHH
T ss_pred             EECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHH
Confidence            4599999999999999999998  77777664 99999998  8889999999999999999999999999999999888


Q ss_pred             cchhhh
Q psy13211         82 TRSLRK   87 (89)
Q Consensus        82 ~~~~~~   87 (89)
                      ++.+..
T Consensus       100 ~~~hh~  105 (115)
T 2dmi_A          100 MIKTKH  105 (115)
T ss_dssp             HHHTTT
T ss_pred             HHHhCC
Confidence            877653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.66  E-value=1.5e-18  Score=90.79  Aligned_cols=81  Identities=14%  Similarity=0.141  Sum_probs=74.4

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcCCCCCCCCc
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRGPKPKPDST   82 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~~~~   82 (89)
                      +.|.  .|++.|.....|..|+.+| ++++|.|..|+..|.....|..|++.|.++++|.|..  |++.|.....|..|+
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   84 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV   84 (124)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHH
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHH
Confidence            4577  8999999999999999999 8899999999999999999999999999999999975  999999999998888


Q ss_pred             chhhhc
Q psy13211         83 RSLRKK   88 (89)
Q Consensus        83 ~~~~~~   88 (89)
                      ++|..+
T Consensus        85 ~~h~~~   90 (124)
T 1ubd_C           85 RIHTGD   90 (124)
T ss_dssp             HHHHCC
T ss_pred             HHhCCC
Confidence            887654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.6e-17  Score=89.71  Aligned_cols=80  Identities=19%  Similarity=0.380  Sum_probs=60.3

Q ss_pred             CccchhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcCCCCCCCCc-c
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRGPKPKPDST-R   83 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~~~~-~   83 (89)
                      |..|++.|.....|..|+++|.+++||.|..  |++.|.....|..|++.|.++++|.|..  |++.|.....|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            3444577877777888887887778888874  8888888888888888888888888876  888888888887776 5


Q ss_pred             hhhhc
Q psy13211         84 SLRKK   88 (89)
Q Consensus        84 ~~~~~   88 (89)
                      .|..+
T Consensus       122 ~H~~~  126 (155)
T 2gli_A          122 THSNE  126 (155)
T ss_dssp             TTCSC
T ss_pred             hcCCC
Confidence            66543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=4.7e-17  Score=83.00  Aligned_cols=61  Identities=16%  Similarity=0.299  Sum_probs=56.7

Q ss_pred             CCCccchhhcccHHHHHHHHH-Hh---cCCCCcccccchhhhcChhhHHHH-HhHhcCCCCCCchH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR-KH---TGRKPFKCVVCKQFFATYSGAYQH-LRRTHGQESCSSLK   67 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~-~h---~~~~p~~c~~c~~~f~~~~~l~~h-~~~h~~ek~~~c~~   67 (89)
                      +.|.+|++.|.....|..|++ +|   .+++||.|.+|++.|.....|..| +++|++++||.|..
T Consensus        19 y~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           19 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             EECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            459999999999999999997 58   568999999999999999999999 89999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.64  E-value=7.4e-18  Score=91.12  Aligned_cols=83  Identities=12%  Similarity=0.113  Sum_probs=75.3

Q ss_pred             CCCCccchhhcccHHHHHHHHHH-hcCCCC--------cccccchhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRK-HTGRKP--------FKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRG   74 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~-h~~~~p--------~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~   74 (89)
                      .++|.+|++.|.....|..|+.. |.++.+        |.|..|+..|.....|..|++.|.++++|.|..  |++.|..
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            45699999999999999999997 777665        789999999999999999999999999999987  9999999


Q ss_pred             CCCCCCCcchhhhc
Q psy13211         75 PKPKPDSTRSLRKK   88 (89)
Q Consensus        75 ~~~~~~~~~~~~~~   88 (89)
                      ...|..|+++|..+
T Consensus       105 ~~~L~~H~~~h~~~  118 (155)
T 2rpc_A          105 SENLKIHKRTHTGE  118 (155)
T ss_dssp             HHHHHHHHTTTCSS
T ss_pred             HHHHHHHHHhhCCC
Confidence            99998888887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=4.6e-16  Score=77.90  Aligned_cols=60  Identities=18%  Similarity=0.214  Sum_probs=56.7

Q ss_pred             CCCccchhhcccHHHHHHHHHH-hcCCCC--------cccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK-HTGRKP--------FKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~-h~~~~p--------~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      ++|.+|++.|.....|..|+++ |.++++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5699999999999999999998 999888        99999999999999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=2.5e-18  Score=84.52  Aligned_cols=76  Identities=14%  Similarity=0.119  Sum_probs=69.8

Q ss_pred             CCC--ccchhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCchH---HHhhhcCCCCCC
Q psy13211          7 TKS--TDIQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSLK---ALRKLRGPKPKP   79 (89)
Q Consensus         7 ~~~--~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~~---~~~~~~~~~~~~   79 (89)
                      +.|  .+|++.|.....|..|+++|.+++||.|..  |++.|.....|..|+++|++   |.|..   |++.|.....|.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            357  899999999999999999999999999988  99999999999999999999   99999   999999888887


Q ss_pred             CCcchh
Q psy13211         80 DSTRSL   85 (89)
Q Consensus        80 ~~~~~~   85 (89)
                      .|++++
T Consensus        79 ~H~~~h   84 (85)
T 2j7j_A           79 KHVAEC   84 (85)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            777665

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.8e-18  Score=91.77  Aligned_cols=80  Identities=21%  Similarity=0.406  Sum_probs=74.1

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHH-hHhcCCCCCCchH--HHhhhcCCCCCC
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHL-RRTHGQESCSSLK--ALRKLRGPKPKP   79 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~-~~h~~ek~~~c~~--~~~~~~~~~~~~   79 (89)
                      +.|..  |++.|.....|..|+++|.+++||.|..  |+..|.....|..|+ +.|.++++|.|..  |++.|.....|.
T Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           68 HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHH
T ss_pred             ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHH
Confidence            56874  9999999999999999999999999998  999999999999998 7999999999988  999999999998


Q ss_pred             CCcchhh
Q psy13211         80 DSTRSLR   86 (89)
Q Consensus        80 ~~~~~~~   86 (89)
                      .|++++.
T Consensus       148 ~H~~~hh  154 (155)
T 2gli_A          148 KHVKTVH  154 (155)
T ss_dssp             HHHHHSC
T ss_pred             HHHHhhc
Confidence            8887764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.3e-17  Score=84.25  Aligned_cols=71  Identities=14%  Similarity=0.151  Sum_probs=43.4

Q ss_pred             hcccHHHHHHHHHHhcCCCCcccccchhhh-cChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCC-cchhh
Q psy13211         15 RMFRIHIIRNHYRKHTGRKPFKCVVCKQFF-ATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDS-TRSLR   86 (89)
Q Consensus        15 ~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f-~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~-~~~~~   86 (89)
                      +|.....+..|++.+.+++||.|..|++.| .....|..|+++| ++++|.|..|++.|.....|..| .++|+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            344444555666666666666666666666 6666666666666 66666666666666666666666 55554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=1.2e-15  Score=69.81  Aligned_cols=55  Identities=20%  Similarity=0.451  Sum_probs=52.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+++|.+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6799999999999999999999999999999999999999999999999998875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=72.82  Aligned_cols=58  Identities=26%  Similarity=0.374  Sum_probs=54.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|++.|.+++|..
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            4599999999999999999999999999999999999999999999999999998753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1e-15  Score=75.25  Aligned_cols=70  Identities=11%  Similarity=0.206  Sum_probs=61.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCC----CCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHh
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGR----KPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALR   70 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~----~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~   70 (89)
                      |.+|..   +.|.+|++.|.....|..|++.+.++    ++|.|..|++.|.....|..|+++|.+++++.|..|+.
T Consensus         7 ~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            7 GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             STTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             cceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            455643   35999999999999999999887665    79999999999999999999999999999999987754

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=8.1e-16  Score=76.08  Aligned_cols=54  Identities=15%  Similarity=0.217  Sum_probs=47.2

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHH-hHhcCCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHL-RRTHGQE   61 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~-~~h~~ek   61 (89)
                      .|.+|++.|....+|..|+++|++++||.|..|++.|.....|..|+ ++|++|.
T Consensus        30 ~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           30 LCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             ECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             ECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            48999999999999999999999999999999999999999999996 5677764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.57  E-value=4.1e-17  Score=90.77  Aligned_cols=79  Identities=13%  Similarity=0.153  Sum_probs=50.1

Q ss_pred             CCc--cchhhcccHHHHHHHH-HHh-cCCCCccc--ccchhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcCCCCCC
Q psy13211          8 KST--DIQVRMFRIHIIRNHY-RKH-TGRKPFKC--VVCKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRGPKPKP   79 (89)
Q Consensus         8 ~~~--~c~~~f~~~~~l~~h~-~~h-~~~~p~~c--~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~   79 (89)
                      .|.  .|++.|.....|..|+ ..| .++++|.|  ..|++.|.....|..|+++|++++||.|..  |++.|.....|.
T Consensus        74 ~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~  153 (190)
T 1tf6_A           74 TCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK  153 (190)
T ss_dssp             ECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHH
T ss_pred             eCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHH
Confidence            455  6666666666666666 344 34556666  666666666666666666666666666655  666666666666


Q ss_pred             CCcchhh
Q psy13211         80 DSTRSLR   86 (89)
Q Consensus        80 ~~~~~~~   86 (89)
                      .|+++|.
T Consensus       154 ~H~~~H~  160 (190)
T 1tf6_A          154 RHEKVHA  160 (190)
T ss_dssp             HHHTSSC
T ss_pred             HHHHHhC
Confidence            6655543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=1.4e-18  Score=87.96  Aligned_cols=59  Identities=15%  Similarity=0.288  Sum_probs=51.2

Q ss_pred             CCCCccchhhcc-cHHHHHHHHHHhcC-CCCcccccchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211          6 KTKSTDIQVRMF-RIHIIRNHYRKHTG-RKPFKCVVCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus         6 ~~~~~~c~~~f~-~~~~l~~h~~~h~~-~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      .+.|.+|++.|. ....|..|+++|.+ ++||.|.+|++.|.....|..|++.|++++|..
T Consensus        24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            356899999998 88889999988888 889999999999999999999998898888864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.56  E-value=1.1e-16  Score=89.03  Aligned_cols=73  Identities=19%  Similarity=0.276  Sum_probs=47.1

Q ss_pred             ccchhhcccHHHHHHHHHHhcCCCCccc--ccchhhhcChhhHHHHHhHhcCCCCCCch--HHHhhhcCCCCCCCCc
Q psy13211         10 TDIQVRMFRIHIIRNHYRKHTGRKPFKC--VVCKQFFATYSGAYQHLRRTHGQESCSSL--KALRKLRGPKPKPDST   82 (89)
Q Consensus        10 ~~c~~~f~~~~~l~~h~~~h~~~~p~~c--~~c~~~f~~~~~l~~h~~~h~~ek~~~c~--~~~~~~~~~~~~~~~~   82 (89)
                      .+|++.|.....|..|+++|.+++||.|  ..|+..|.....|..|+++|.++++|.|.  .|++.|.....|..|+
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   94 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF   94 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHH
Confidence            4666666666666666666666666666  56666666666666666666666666666  5666666555555554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5.9e-15  Score=70.58  Aligned_cols=55  Identities=31%  Similarity=0.513  Sum_probs=48.0

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|.+|++.|.....|..|+++|+++.
T Consensus        15 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             EECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3488999999999899999999998999999999999999999999988888764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=8.5e-15  Score=73.87  Aligned_cols=56  Identities=16%  Similarity=0.252  Sum_probs=51.4

Q ss_pred             CCCccchhhc-ccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHH-HhHhcCCCCC
Q psy13211          7 TKSTDIQVRM-FRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH-LRRTHGQESC   63 (89)
Q Consensus         7 ~~~~~c~~~f-~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h-~~~h~~ek~~   63 (89)
                      +.|.+|++.| ....+|..|+++| +++||.|.+|++.|.....|..| +++|+++..+
T Consensus        35 ~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             EECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            5699999999 9999999999999 99999999999999999999999 8889875444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.54  E-value=6.7e-15  Score=67.27  Aligned_cols=54  Identities=28%  Similarity=0.399  Sum_probs=48.2

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      .+.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|++.|.+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999999999999999887753

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=5.1e-17  Score=77.46  Aligned_cols=62  Identities=11%  Similarity=0.122  Sum_probs=57.6

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      ++++++||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|..++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999999999999999999999999998887654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=5.7e-17  Score=77.72  Aligned_cols=63  Identities=24%  Similarity=0.352  Sum_probs=58.5

Q ss_pred             HHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         26 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        26 ~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      .++|++++||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|+.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            346889999999999999999999999999999999999999999999999999999888754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=1.2e-16  Score=76.90  Aligned_cols=63  Identities=19%  Similarity=0.256  Sum_probs=58.2

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      ..+.++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|..++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            356788999999999999999999999999999999999999999999999999999988764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.53  E-value=8.7e-15  Score=74.54  Aligned_cols=59  Identities=22%  Similarity=0.253  Sum_probs=56.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      +.|.+|++.|.....|..|+++|.++++|.|.+|+..|.....|..|+++|.++++|.+
T Consensus        46 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           46 YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            67999999999999999999999999999999999999999999999999999999864

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1e-16  Score=79.34  Aligned_cols=61  Identities=15%  Similarity=0.183  Sum_probs=55.7

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCc-chhhhc
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDST-RSLRKK   88 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~-~~~~~~   88 (89)
                      .+.+.+++.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|+ +.|..|
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            4567789999999999999999999999999999999999999999999999996 567665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1.2e-16  Score=84.19  Aligned_cols=76  Identities=12%  Similarity=0.171  Sum_probs=64.7

Q ss_pred             Cccchhhcc------cHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCc
Q psy13211          9 STDIQVRMF------RIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDST   82 (89)
Q Consensus         9 ~~~c~~~f~------~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~   82 (89)
                      |.+|.+.|.      ....|..|+ .|++++||.|..|++.|.....|..|+++|  ++||.|..|++.|.....|..|+
T Consensus        44 c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~  120 (129)
T 2wbt_A           44 RAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHV  120 (129)
T ss_dssp             HHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred             chhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHH
Confidence            556665554      555666666 688999999999999999999999999998  89999999999999999999998


Q ss_pred             chhhh
Q psy13211         83 RSLRK   87 (89)
Q Consensus        83 ~~~~~   87 (89)
                      ++|+.
T Consensus       121 ~~h~~  125 (129)
T 2wbt_A          121 CKKHN  125 (129)
T ss_dssp             HHTTC
T ss_pred             HHHCC
Confidence            88764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3.2e-15  Score=75.53  Aligned_cols=70  Identities=14%  Similarity=0.139  Sum_probs=63.9

Q ss_pred             HHHHHHHHHhcCCCCcccccchhhhc-ChhhHHHHHhHhcC-CCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         20 HIIRNHYRKHTGRKPFKCVVCKQFFA-TYSGAYQHLRRTHG-QESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        20 ~~l~~h~~~h~~~~p~~c~~c~~~f~-~~~~l~~h~~~h~~-ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      ..+..|+++|.++++|.|..|++.|. ....|..|+++|.+ +++|.|..|++.|.....|..|++.|+.++
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34567899999999999999999999 99999999999999 999999999999999999999988887654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=1.1e-16  Score=73.40  Aligned_cols=57  Identities=18%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             CCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhh
Q psy13211         31 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRK   87 (89)
Q Consensus        31 ~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~   87 (89)
                      |++||.|..|++.|.....|..|+++|++++||.|..|++.|.....|..|++++.+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999999999999999888877653

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.9e-14  Score=66.40  Aligned_cols=54  Identities=24%  Similarity=0.455  Sum_probs=50.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHH-hHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHL-RRTHGQ   60 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~-~~h~~e   60 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+ ++|.++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            679999999999999999999999999999999999999999999996 677764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=4e-16  Score=75.56  Aligned_cols=62  Identities=16%  Similarity=0.232  Sum_probs=57.4

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .+.+++||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|..++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            35678999999999999999999999999999999999999999999999999999988664

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.48  E-value=3.2e-15  Score=65.71  Aligned_cols=44  Identities=25%  Similarity=0.465  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.2e-14  Score=72.22  Aligned_cols=60  Identities=13%  Similarity=0.259  Sum_probs=55.7

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHh-HhcCCCCCCch
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQESCSSL   66 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~~~c~   66 (89)
                      .+.|.+|++.|.....|..|+. |.+++||.|.+|++.|.....|..|++ +|.++++|.+.
T Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            3679999999999999999995 999999999999999999999999997 99999999764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1e-16  Score=75.53  Aligned_cols=52  Identities=19%  Similarity=0.301  Sum_probs=42.5

Q ss_pred             CCccchhhcccHHHHHHHHHH-h-cCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRK-H-TGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~-h-~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      .|.+|++.|....+|..|+++ | .+++||.|..|++.|.....|..|++.+.+
T Consensus        12 ~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            488888888888888888877 6 578888888888888888888888877654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.47  E-value=3.3e-15  Score=65.67  Aligned_cols=44  Identities=25%  Similarity=0.414  Sum_probs=40.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.47  E-value=3.2e-15  Score=65.67  Aligned_cols=44  Identities=25%  Similarity=0.399  Sum_probs=40.6

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999865

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.6e-15  Score=65.49  Aligned_cols=44  Identities=25%  Similarity=0.409  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.3e-15  Score=65.65  Aligned_cols=44  Identities=25%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.47  E-value=3.8e-15  Score=65.48  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.7e-15  Score=65.95  Aligned_cols=44  Identities=23%  Similarity=0.362  Sum_probs=40.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999764

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.5e-15  Score=65.22  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.47  E-value=3.1e-14  Score=70.41  Aligned_cols=56  Identities=27%  Similarity=0.417  Sum_probs=51.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+++|++++.
T Consensus        35 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            46999999999999999999999999999999999999999999999999998763

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4e-15  Score=65.41  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45678999999999999999999999999999999999999765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.1e-15  Score=65.72  Aligned_cols=44  Identities=23%  Similarity=0.478  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.1e-15  Score=65.73  Aligned_cols=44  Identities=25%  Similarity=0.472  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.1e-15  Score=65.14  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=38.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578899999999999999999999999999999999998754

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-15  Score=65.46  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4e-15  Score=65.35  Aligned_cols=44  Identities=20%  Similarity=0.354  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.8e-15  Score=65.46  Aligned_cols=44  Identities=25%  Similarity=0.433  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.1e-15  Score=65.34  Aligned_cols=44  Identities=25%  Similarity=0.403  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.5e-15  Score=65.55  Aligned_cols=44  Identities=20%  Similarity=0.410  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-15  Score=65.49  Aligned_cols=44  Identities=25%  Similarity=0.468  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.5e-15  Score=65.58  Aligned_cols=44  Identities=23%  Similarity=0.438  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.46  E-value=3.9e-15  Score=65.40  Aligned_cols=44  Identities=20%  Similarity=0.321  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56678999999999999999999999999999999999999764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.3e-15  Score=65.67  Aligned_cols=44  Identities=23%  Similarity=0.452  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.4e-15  Score=65.62  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=6.4e-14  Score=65.76  Aligned_cols=61  Identities=11%  Similarity=0.301  Sum_probs=55.4

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhH-h-cCCCCCCchHHHhhhcCCCCCCCCcchhhh
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRR-T-HGQESCSSLKALRKLRGPKPKPDSTRSLRK   87 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~-h-~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~   87 (89)
                      ++|++++||.|..|++.|.....|..|++. | .++++|.|..|++.|.....|..|+++++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            468899999999999999999999999988 7 689999999999999999999888877654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.4e-15  Score=65.25  Aligned_cols=44  Identities=23%  Similarity=0.408  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.7e-15  Score=65.13  Aligned_cols=44  Identities=25%  Similarity=0.431  Sum_probs=40.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.4e-15  Score=64.92  Aligned_cols=44  Identities=20%  Similarity=0.405  Sum_probs=40.6

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.8e-15  Score=65.16  Aligned_cols=44  Identities=23%  Similarity=0.447  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.1e-15  Score=76.86  Aligned_cols=61  Identities=7%  Similarity=0.004  Sum_probs=55.4

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHh-Hh---cCCCCCCchHHHhhhcCCCCCCCC-cchhhhcC
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLR-RT---HGQESCSSLKALRKLRGPKPKPDS-TRSLRKKK   89 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h---~~ek~~~c~~~~~~~~~~~~~~~~-~~~~~~~~   89 (89)
                      -.|++||.|..|++.|.....|..|++ .|   .+++||.|..|++.|.....|..| .++|+.++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek   78 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE   78 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCC
Confidence            368899999999999999999999997 58   678999999999999999999999 78888764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-15  Score=65.15  Aligned_cols=44  Identities=30%  Similarity=0.523  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.8e-15  Score=64.85  Aligned_cols=44  Identities=27%  Similarity=0.457  Sum_probs=40.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.8e-15  Score=64.91  Aligned_cols=44  Identities=32%  Similarity=0.527  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.8e-15  Score=65.46  Aligned_cols=44  Identities=27%  Similarity=0.448  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.45  E-value=5.2e-15  Score=64.96  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=40.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.7e-15  Score=65.12  Aligned_cols=44  Identities=25%  Similarity=0.379  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999764

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.9e-15  Score=64.79  Aligned_cols=44  Identities=25%  Similarity=0.381  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.9e-15  Score=64.81  Aligned_cols=44  Identities=18%  Similarity=0.320  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5e-15  Score=65.03  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.2e-15  Score=64.99  Aligned_cols=44  Identities=32%  Similarity=0.542  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45678999999999999999999999999999999999999765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.3e-13  Score=68.97  Aligned_cols=58  Identities=26%  Similarity=0.383  Sum_probs=54.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      +.|.+|++.|.....|..|+++|.++++|.|..|+..|.....|..|+++|+++++..
T Consensus        37 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           37 YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999999999999999999999999999999999999987653

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.7e-15  Score=65.11  Aligned_cols=44  Identities=25%  Similarity=0.338  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4e-15  Score=65.38  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=40.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55678999999999999999999999999999999999999765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.3e-15  Score=65.23  Aligned_cols=44  Identities=20%  Similarity=0.298  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.8e-15  Score=65.14  Aligned_cols=44  Identities=20%  Similarity=0.273  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.9e-15  Score=64.82  Aligned_cols=44  Identities=23%  Similarity=0.400  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45678999999999999999999999999999999999999765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.44  E-value=7.3e-15  Score=64.55  Aligned_cols=44  Identities=18%  Similarity=0.336  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678999999999999999999999999999999999999765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.4e-15  Score=64.71  Aligned_cols=43  Identities=23%  Similarity=0.519  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5668899999999999999999999999999999999999975

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=6.3e-16  Score=75.01  Aligned_cols=58  Identities=16%  Similarity=0.163  Sum_probs=51.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcC---CCCcccccchhhhcChhhHHHHH-hHhcCCCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTG---RKPFKCVVCKQFFATYSGAYQHL-RRTHGQESCS   64 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~---~~p~~c~~c~~~f~~~~~l~~h~-~~h~~ek~~~   64 (89)
                      +.|.+|++.|.....|..|+++|.+   +++|.|..|++.|.....|..|+ ..|.++++..
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             eECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            4599999999999999999999986   89999999999999999999998 5677776653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.44  E-value=7.9e-16  Score=70.43  Aligned_cols=56  Identities=13%  Similarity=0.100  Sum_probs=52.5

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      ||.|..|+..|.....|..|+++|.++++|.|..|++.|.....|..|+++|..++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999998887654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.4e-16  Score=78.46  Aligned_cols=67  Identities=19%  Similarity=0.300  Sum_probs=59.4

Q ss_pred             HHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC----CCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         22 IRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ----ESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        22 l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e----k~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      +..|+++|++++||.|..|+..|.....|..|++.+.++    ++|.|..|++.|.....|..|+++|..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence            456788999999999999999999999999999877665    7999999999999999998888887654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.2e-15  Score=65.00  Aligned_cols=44  Identities=20%  Similarity=0.360  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.5e-15  Score=64.33  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.7e-16  Score=76.17  Aligned_cols=62  Identities=24%  Similarity=0.280  Sum_probs=47.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHH-HhcCC-CCcccccchhhhcChhhHHHHHhHhc-CCCC
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYR-KHTGR-KPFKCVVCKQFFATYSGAYQHLRRTH-GQES   62 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~-~h~~~-~p~~c~~c~~~f~~~~~l~~h~~~h~-~ek~   62 (89)
                      |.+|..   +.|.+|++.|.....|..|+. .|.++ ++|.|..|++.|.....|..|++.+. .+.|
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            445543   348889999998888999986 57764 78999999999999999998888644 3444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.3e-15  Score=64.38  Aligned_cols=44  Identities=23%  Similarity=0.521  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHh-HhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|++ +|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5567899999999999999999999999999 9999999999765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.7e-15  Score=65.15  Aligned_cols=44  Identities=27%  Similarity=0.427  Sum_probs=40.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.2e-14  Score=63.82  Aligned_cols=43  Identities=28%  Similarity=0.469  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999975

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.42  E-value=8.3e-15  Score=66.51  Aligned_cols=51  Identities=14%  Similarity=0.169  Sum_probs=46.0

Q ss_pred             hhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211         14 VRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus        14 ~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      +.|.....|..|+++|++++||.|..|+..|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            456666678889999999999999999999999999999999999999984

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.41  E-value=3e-14  Score=61.34  Aligned_cols=42  Identities=24%  Similarity=0.417  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            345788999999999999999999999999999999999983

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.8e-14  Score=62.57  Aligned_cols=43  Identities=26%  Similarity=0.434  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.8e-14  Score=60.94  Aligned_cols=42  Identities=26%  Similarity=0.407  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            345788999999999999999999999999999999999883

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.1e-13  Score=67.00  Aligned_cols=56  Identities=11%  Similarity=0.174  Sum_probs=51.8

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcC---CCCCCchHHHhhhcCCCCCCCCcc
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG---QESCSSLKALRKLRGPKPKPDSTR   83 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~---ek~~~c~~~~~~~~~~~~~~~~~~   83 (89)
                      +|++++||.|..|++.|.....|..|+++|.+   +++|.|..|++.|.....|..|++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            37899999999999999999999999999986   899999999999999988888873

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.7e-14  Score=62.67  Aligned_cols=43  Identities=26%  Similarity=0.497  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.9e-14  Score=62.59  Aligned_cols=42  Identities=26%  Similarity=0.521  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2e-14  Score=63.10  Aligned_cols=43  Identities=23%  Similarity=0.390  Sum_probs=39.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567899999999999999999999999999999999999963

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.1e-14  Score=62.47  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=39.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999963

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.2e-13  Score=64.99  Aligned_cols=54  Identities=17%  Similarity=0.199  Sum_probs=47.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccc-cchhhhcChhhHHHHHhHhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV-VCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~-~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      ++|.+|++.|. ..+|..|+++ .+++||.|. .|++.|.....|..|+++|..+++
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             eeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45899999999 8889999988 899999999 999999999999999988877665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.39  E-value=3.7e-14  Score=62.22  Aligned_cols=43  Identities=28%  Similarity=0.465  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.9e-14  Score=62.53  Aligned_cols=43  Identities=26%  Similarity=0.501  Sum_probs=39.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999863

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.4e-14  Score=61.92  Aligned_cols=43  Identities=26%  Similarity=0.422  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567899999999999999999999999999999999999963

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.39  E-value=2.1e-13  Score=66.28  Aligned_cols=53  Identities=30%  Similarity=0.466  Sum_probs=49.8

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      +.|.+|++.|.....|..|+++|.+++||.|..|+..|.....|..|+++|+|
T Consensus        30 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           30 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            46999999999999999999999999999999999999999999999998875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.3e-14  Score=61.97  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.3e-14  Score=61.36  Aligned_cols=42  Identities=33%  Similarity=0.488  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999984

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.3e-14  Score=61.21  Aligned_cols=41  Identities=24%  Similarity=0.429  Sum_probs=37.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45678999999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.2e-14  Score=61.20  Aligned_cols=41  Identities=24%  Similarity=0.500  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45678999999999999999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.1e-14  Score=61.72  Aligned_cols=42  Identities=26%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.9e-14  Score=61.84  Aligned_cols=43  Identities=26%  Similarity=0.377  Sum_probs=39.4

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567899999999999999999999999999999999999963

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.6e-14  Score=61.90  Aligned_cols=42  Identities=21%  Similarity=0.372  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.8e-14  Score=61.53  Aligned_cols=42  Identities=31%  Similarity=0.378  Sum_probs=38.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566789999999999999999999999999999999999984

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.7e-14  Score=61.85  Aligned_cols=42  Identities=21%  Similarity=0.422  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.7e-14  Score=61.89  Aligned_cols=42  Identities=29%  Similarity=0.439  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=4.3e-14  Score=60.86  Aligned_cols=41  Identities=27%  Similarity=0.495  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45678899999999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.5e-14  Score=61.71  Aligned_cols=42  Identities=26%  Similarity=0.449  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            567899999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.38  E-value=5.6e-14  Score=60.41  Aligned_cols=41  Identities=20%  Similarity=0.332  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            35678899999999999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.1e-14  Score=61.75  Aligned_cols=42  Identities=26%  Similarity=0.416  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.5e-14  Score=61.42  Aligned_cols=42  Identities=29%  Similarity=0.439  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            456789999999999999999999999999999999999986

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.4e-14  Score=61.67  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            556789999999999999999999999999999999999986

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.8e-14  Score=61.82  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5567899999999999999999999999999999999999863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.3e-15  Score=71.14  Aligned_cols=46  Identities=33%  Similarity=0.614  Sum_probs=25.1

Q ss_pred             chhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHh
Q psy13211         12 IQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        12 c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      |++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|
T Consensus        27 C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             BCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            5555555555555555555555555555555555555555555443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.6e-14  Score=61.92  Aligned_cols=42  Identities=29%  Similarity=0.487  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            566789999999999999999999999999999999999986

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3e-14  Score=62.51  Aligned_cols=43  Identities=28%  Similarity=0.422  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667899999999999999999999999999999999999963

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.3e-14  Score=74.94  Aligned_cols=69  Identities=12%  Similarity=0.132  Sum_probs=60.9

Q ss_pred             HHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhH--hcCCCCCC-chHHHhhh--cCCCCCCCCcchhhhcC
Q psy13211         21 IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRR--THGQESCS-SLKALRKL--RGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        21 ~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~--h~~ek~~~-c~~~~~~~--~~~~~~~~~~~~~~~~~   89 (89)
                      .|..|+++|++++||.|..|++.|.....|..|++.  +.+++++. |..|++.|  .....|..|+++|..++
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            466788899999999999999999999999999998  77777655 99999999  89999999999887653

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.4e-14  Score=62.28  Aligned_cols=43  Identities=30%  Similarity=0.520  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchH
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLK   67 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~   67 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567899999999999999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=6.2e-14  Score=60.92  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            566789999999999999999999999999999999999983

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.1e-14  Score=62.07  Aligned_cols=42  Identities=19%  Similarity=0.367  Sum_probs=38.2

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            468899999999999999999999999999999999999765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=6.1e-14  Score=60.94  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566789999999999999999999999999999999999984

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.2e-12  Score=63.17  Aligned_cols=64  Identities=16%  Similarity=0.272  Sum_probs=56.8

Q ss_pred             HHHHHHhcCCCCcccccchhhhcChhhHHHHHh-HhcCC-CCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQ-ESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        23 ~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~e-k~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      ..|+++|++++||.|.+|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++.+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            357788999999999999999999999999987 67775 89999999999999999888877654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2e-15  Score=72.11  Aligned_cols=62  Identities=16%  Similarity=0.154  Sum_probs=53.2

Q ss_pred             HHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         21 IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        21 ~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .|..|+++|.+++||.|..|++.|.....|..       +++|.|..|++.|.....|..|+++|..++
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~   66 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKK   66 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCC
Confidence            35667788999999999999999998887764       789999999999999999999999887653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-14  Score=61.69  Aligned_cols=42  Identities=31%  Similarity=0.484  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456789999999999999999999999999999999999986

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-14  Score=61.59  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            566789999999999999999999999999999999999986

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=1.1e-13  Score=62.79  Aligned_cols=47  Identities=13%  Similarity=0.200  Sum_probs=39.4

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHh-HhcCCCCCCchHHHhhhcC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQESCSSLKALRKLRG   74 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~~~c~~~~~~~~~   74 (89)
                      .+++++||.|..|++.|.....|..|++ +|++++||.|..|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3567888999999999999898988886 8888899999888887754

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=1.4e-13  Score=60.08  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=37.7

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHH
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKAL   69 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~   69 (89)
                      +|++++||.|..|++.|.....|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            478899999999999999999999999999999999998764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7e-14  Score=61.33  Aligned_cols=42  Identities=29%  Similarity=0.543  Sum_probs=38.7

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456789999999999999999999999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1e-13  Score=60.24  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456788999999999999999999999999999999999984

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.2e-14  Score=61.43  Aligned_cols=42  Identities=29%  Similarity=0.489  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556789999999999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.1e-13  Score=64.11  Aligned_cols=59  Identities=17%  Similarity=0.335  Sum_probs=54.1

Q ss_pred             HhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         28 KHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        28 ~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      ++.++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            57889999997  699999999999999999999999999999999999999888887763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.9e-14  Score=61.54  Aligned_cols=42  Identities=26%  Similarity=0.488  Sum_probs=39.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.1e-14  Score=61.05  Aligned_cols=42  Identities=24%  Similarity=0.425  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999985

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7.6e-14  Score=61.18  Aligned_cols=43  Identities=30%  Similarity=0.465  Sum_probs=38.8

Q ss_pred             HHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         26 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        26 ~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      +++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3568899999999999999999999999999999999999764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=9.7e-15  Score=67.41  Aligned_cols=55  Identities=16%  Similarity=0.225  Sum_probs=50.3

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCc-chhhh
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDST-RSLRK   87 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~-~~~~~   87 (89)
                      +||.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|+ +.|..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999988885 56654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=5.6e-14  Score=61.65  Aligned_cols=42  Identities=26%  Similarity=0.233  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC-CCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG-QESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~-ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56678999999999999999999999999999999 9999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=7.9e-14  Score=60.58  Aligned_cols=42  Identities=19%  Similarity=0.210  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566789999999999999999999999999999999999983

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.5e-13  Score=59.70  Aligned_cols=41  Identities=29%  Similarity=0.371  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            56678999999999999999999999999999999999986

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.33  E-value=2.8e-15  Score=70.02  Aligned_cols=55  Identities=16%  Similarity=0.206  Sum_probs=47.4

Q ss_pred             HHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCC
Q psy13211         24 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDS   81 (89)
Q Consensus        24 ~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~   81 (89)
                      .|+++|++++||.|..|+..|.....|.   ++|++++||.|..|++.|....++..+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            4667899999999999999999888775   789999999999999999887776544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=2.4e-13  Score=60.16  Aligned_cols=42  Identities=21%  Similarity=0.311  Sum_probs=37.2

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHh
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALR   70 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~   70 (89)
                      +.+++||.|.+|++.|.....|..|+++|++++||.|..|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567889999999999999999999999999999999988753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.6e-13  Score=56.54  Aligned_cols=38  Identities=21%  Similarity=0.414  Sum_probs=36.0

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      +|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            57899999999999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4.5e-13  Score=58.71  Aligned_cols=40  Identities=25%  Similarity=0.463  Sum_probs=36.6

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999999999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=8.9e-13  Score=56.96  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=35.9

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      +|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            578899999999999999999999999999999999985

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=7.4e-14  Score=71.52  Aligned_cols=60  Identities=15%  Similarity=0.185  Sum_probs=55.6

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      .|+++++|.| .|+..|.....|..|++.|.++++|.|..|++.|.....|..|+++|..+
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   63 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI   63 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence            4789999999 89999999999999999999999999999999999999999998887654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.28  E-value=4.7e-14  Score=69.77  Aligned_cols=55  Identities=20%  Similarity=0.369  Sum_probs=51.1

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      ++||.|..|+..|.....|..|+++|.+++||.|..|++.|.....|..|++.+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            5799999999999999999999999999999999999999999998888877664

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=5.5e-14  Score=66.16  Aligned_cols=56  Identities=11%  Similarity=0.202  Sum_probs=51.2

Q ss_pred             cCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch-HHHhhhcCCCCCCCCcchhhh
Q psy13211         30 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL-KALRKLRGPKPKPDSTRSLRK   87 (89)
Q Consensus        30 ~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~-~~~~~~~~~~~~~~~~~~~~~   87 (89)
                      -+++||.|..|++.|. ...|..|+++ ++++||.|. .|++.|.....|..|+++|-.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            4678999999999999 9999999999 999999999 999999999999999887643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.27  E-value=3.5e-12  Score=66.89  Aligned_cols=52  Identities=19%  Similarity=0.277  Sum_probs=49.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +.|.+|++.|....+|..|+++|  ++||.|..|++.|.....|..|++.|++.
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            56999999999999999999999  88999999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=2.4e-12  Score=61.25  Aligned_cols=51  Identities=29%  Similarity=0.528  Sum_probs=40.9

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHh
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRT   57 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h   57 (89)
                      +.|..  |++.|.....|..|+++|.+++||.|..  |++.|.....|..|+++|
T Consensus        18 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34766  8888888888888888888888888864  888888888888887653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.8e-13  Score=59.75  Aligned_cols=43  Identities=26%  Similarity=0.405  Sum_probs=38.4

Q ss_pred             HHHhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211         26 YRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus        26 ~~~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      .++|++++||.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3568899999998  899999999999999999999999999765

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=56.61  Aligned_cols=40  Identities=33%  Similarity=0.554  Sum_probs=37.0

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4688999999999999999999999999999999999985

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.25  E-value=6e-12  Score=63.17  Aligned_cols=53  Identities=38%  Similarity=0.657  Sum_probs=49.1

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      +.|.  +|++.|.....|..|+++|.+++||.|.+|+..|.....|..|+++|.+
T Consensus        46 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           46 YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            4575  6999999999999999999999999999999999999999999998864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.25  E-value=5.5e-12  Score=62.82  Aligned_cols=54  Identities=24%  Similarity=0.415  Sum_probs=49.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCC--CCcccccchhhhcChhhHHHHHh-HhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGR--KPFKCVVCKQFFATYSGAYQHLR-RTHGQ   60 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~--~p~~c~~c~~~f~~~~~l~~h~~-~h~~e   60 (89)
                      +.|.+|++.|.....|..|+++|.++  ++|.|..|+..|.....|..|++ .|.++
T Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           36 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            46999999999999999999999987  89999999999999999999986 67764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-14  Score=69.02  Aligned_cols=55  Identities=13%  Similarity=0.215  Sum_probs=49.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKA   68 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~   68 (89)
                      +.|.+|++.|.....|..       +++|.|..|+..|.....|..|+++|+++++|.|..|
T Consensus        19 ~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           19 QKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             EECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             eeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            359999999988777665       7899999999999999999999999999999999765

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.21  E-value=8.4e-12  Score=61.38  Aligned_cols=52  Identities=29%  Similarity=0.586  Sum_probs=47.9

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhc
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      +.|.  +|++.|.....|..|+++|.+++||.|..|+..|.....|..|+++|.
T Consensus        36 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           36 YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            3476  699999999999999999999999999999999999999999998773

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=2e-13  Score=66.05  Aligned_cols=60  Identities=15%  Similarity=0.223  Sum_probs=54.7

Q ss_pred             cCCCCccccc--chhhhcChhhHHHHHh-HhcCCCCCCchH--HHhhhcCCCCCCCCcchhhhcC
Q psy13211         30 TGRKPFKCVV--CKQFFATYSGAYQHLR-RTHGQESCSSLK--ALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        30 ~~~~p~~c~~--c~~~f~~~~~l~~h~~-~h~~ek~~~c~~--~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|..++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   67 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR   67 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence            5788999986  9999999999999999 799999999998  9999999999999999887653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.16  E-value=1.7e-11  Score=51.68  Aligned_cols=37  Identities=14%  Similarity=0.262  Sum_probs=32.1

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCc
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSS   65 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c   65 (89)
                      |++++||.|..|++.|.....|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5678899999999999999999999999999998865

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=4.2e-13  Score=63.93  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=50.3

Q ss_pred             hcCCCCccccc--chhhhcChhhHHHHHhHhcCCCCCCch--HHHhhhcCCCCCCCCcchh
Q psy13211         29 HTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESCSSL--KALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus        29 h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~--~~~~~~~~~~~~~~~~~~~   85 (89)
                      ....++|.|..  |++.|.....|..|+++|+++++|.|.  .|++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678999988  999999999999999999999999995  5999999988887777654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.8e-11  Score=52.00  Aligned_cols=40  Identities=20%  Similarity=-0.053  Sum_probs=35.0

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            456654   3499999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.1e-11  Score=51.60  Aligned_cols=40  Identities=20%  Similarity=0.103  Sum_probs=34.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456643   3599999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6.3e-11  Score=51.11  Aligned_cols=40  Identities=10%  Similarity=-0.089  Sum_probs=34.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456654   4599999999999999999999999999999876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=1.6e-11  Score=55.41  Aligned_cols=40  Identities=20%  Similarity=0.234  Sum_probs=36.9

Q ss_pred             CCCccchhhcccHHHHHHHHH-HhcCCCCcccccchhhhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR-KHTGRKPFKCVVCKQFFAT   46 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~-~h~~~~p~~c~~c~~~f~~   46 (89)
                      +.|.+|++.|.....|..|++ +|.+++||.|.+|++.|..
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            459999999999999999997 8999999999999999865

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.13  E-value=8.2e-11  Score=51.24  Aligned_cols=40  Identities=18%  Similarity=0.052  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445543   4599999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.1e-11  Score=51.42  Aligned_cols=40  Identities=23%  Similarity=0.150  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.8e-11  Score=51.28  Aligned_cols=40  Identities=18%  Similarity=0.051  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            445644   3599999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5e-11  Score=51.91  Aligned_cols=40  Identities=20%  Similarity=0.010  Sum_probs=35.1

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456644   4599999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.9e-11  Score=51.26  Aligned_cols=40  Identities=13%  Similarity=0.018  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456654   4599999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.6e-11  Score=51.28  Aligned_cols=40  Identities=18%  Similarity=0.062  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            455643   4699999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.5e-11  Score=51.00  Aligned_cols=40  Identities=15%  Similarity=-0.091  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   ++|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345543   5699999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.2e-11  Score=51.05  Aligned_cols=40  Identities=20%  Similarity=0.126  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   ++|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            455643   4599999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8e-11  Score=51.31  Aligned_cols=40  Identities=18%  Similarity=0.002  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445643   4699999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.11  E-value=4.9e-11  Score=51.97  Aligned_cols=40  Identities=20%  Similarity=0.061  Sum_probs=35.0

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456654   4599999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7.2e-11  Score=51.43  Aligned_cols=40  Identities=10%  Similarity=-0.076  Sum_probs=34.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            456653   4599999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-10  Score=50.75  Aligned_cols=40  Identities=18%  Similarity=-0.006  Sum_probs=35.0

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455643   5699999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7.8e-11  Score=51.28  Aligned_cols=40  Identities=15%  Similarity=-0.034  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1e-10  Score=50.88  Aligned_cols=40  Identities=13%  Similarity=-0.091  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455643   4599999999999999999999999999999875

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.5e-11  Score=51.34  Aligned_cols=40  Identities=15%  Similarity=0.012  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            455643   3499999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8e-11  Score=51.24  Aligned_cols=40  Identities=15%  Similarity=-0.010  Sum_probs=34.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345543   3499999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.10  E-value=7e-11  Score=51.44  Aligned_cols=40  Identities=20%  Similarity=0.071  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445643   3599999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.3e-11  Score=51.19  Aligned_cols=40  Identities=18%  Similarity=-0.050  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445643   4599999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.2e-11  Score=51.60  Aligned_cols=40  Identities=20%  Similarity=0.056  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.5e-11  Score=51.15  Aligned_cols=40  Identities=20%  Similarity=0.117  Sum_probs=34.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            345543   3499999999999999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.4e-11  Score=51.56  Aligned_cols=40  Identities=18%  Similarity=0.008  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            345543   4599999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.8e-11  Score=51.51  Aligned_cols=40  Identities=20%  Similarity=-0.031  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445643   4599999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.10  E-value=8.3e-11  Score=51.23  Aligned_cols=40  Identities=18%  Similarity=-0.027  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456643   4599999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=6.7e-11  Score=51.53  Aligned_cols=40  Identities=18%  Similarity=0.063  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455644   4599999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1e-10  Score=50.89  Aligned_cols=40  Identities=18%  Similarity=0.091  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345543   3599999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.9e-11  Score=51.70  Aligned_cols=40  Identities=20%  Similarity=0.077  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            4 GSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456654   3499999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7e-11  Score=51.39  Aligned_cols=40  Identities=23%  Similarity=0.066  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345543   4599999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=6.9e-11  Score=51.46  Aligned_cols=40  Identities=18%  Similarity=-0.010  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-11  Score=50.91  Aligned_cols=36  Identities=19%  Similarity=0.448  Sum_probs=31.8

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      ++|++++||.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            357889999999999999999999999999998875

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.5e-11  Score=51.33  Aligned_cols=40  Identities=20%  Similarity=0.011  Sum_probs=34.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345543   3499999999999999999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=7e-11  Score=55.87  Aligned_cols=39  Identities=18%  Similarity=0.322  Sum_probs=34.7

Q ss_pred             hcCCCCccccc--chhhhcChhhHHHHH-hHhcCCCCCCchH
Q psy13211         29 HTGRKPFKCVV--CKQFFATYSGAYQHL-RRTHGQESCSSLK   67 (89)
Q Consensus        29 h~~~~p~~c~~--c~~~f~~~~~l~~h~-~~h~~ek~~~c~~   67 (89)
                      .+|++||.|..  |++.|....+|..|+ ++|++++|+-|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            57899999975  999999999999997 6899999998864

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.08  E-value=6.5e-11  Score=51.50  Aligned_cols=40  Identities=18%  Similarity=-0.029  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   ++|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445643   3599999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.08  E-value=7.6e-11  Score=51.32  Aligned_cols=40  Identities=18%  Similarity=0.037  Sum_probs=34.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   ++|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            455643   4699999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.7e-11  Score=51.16  Aligned_cols=40  Identities=15%  Similarity=0.035  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345543   4599999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.6e-11  Score=51.11  Aligned_cols=40  Identities=20%  Similarity=0.082  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445643   4599999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=8.1e-11  Score=51.19  Aligned_cols=40  Identities=15%  Similarity=0.026  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456644   3499999999999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.1e-11  Score=51.03  Aligned_cols=40  Identities=15%  Similarity=-0.035  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445543   4699999999999999999999999999999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.8e-11  Score=51.73  Aligned_cols=40  Identities=13%  Similarity=-0.017  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455643   4599999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.9e-11  Score=50.91  Aligned_cols=40  Identities=18%  Similarity=0.031  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   ++|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=50.50  Aligned_cols=40  Identities=18%  Similarity=-0.078  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.2e-11  Score=51.20  Aligned_cols=40  Identities=15%  Similarity=-0.029  Sum_probs=34.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            455643   3499999999999999999999999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-10  Score=50.70  Aligned_cols=40  Identities=15%  Similarity=-0.080  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445643   4599999999999999999999999999999876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.4e-10  Score=49.70  Aligned_cols=40  Identities=20%  Similarity=0.069  Sum_probs=34.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.1e-11  Score=51.22  Aligned_cols=40  Identities=20%  Similarity=0.047  Sum_probs=34.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445643   3499999999999999999999999999999876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.04  E-value=9e-11  Score=48.12  Aligned_cols=35  Identities=29%  Similarity=0.609  Sum_probs=31.5

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      +|++++||.|..|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36789999999999999999999999999998875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.04  E-value=9.1e-11  Score=48.02  Aligned_cols=35  Identities=23%  Similarity=0.544  Sum_probs=30.9

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      +|++++||.|..|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36788999999999999999999999999988875

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=50.65  Aligned_cols=40  Identities=23%  Similarity=0.138  Sum_probs=34.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             ccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345543   3599999999999999999999999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=50.31  Aligned_cols=40  Identities=15%  Similarity=0.012  Sum_probs=34.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455654   3599999999999999999999999999999764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=3.6e-11  Score=52.94  Aligned_cols=36  Identities=14%  Similarity=0.153  Sum_probs=33.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQ   42 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~   42 (89)
                      +.|.+|++.|.....|..|+++|++++||.|.+|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            459999999999999999999999999999999973

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.9e-10  Score=50.13  Aligned_cols=40  Identities=18%  Similarity=0.105  Sum_probs=34.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHH-HhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYR-KHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~-~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|++ +|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            455643   569999999999999999999 9999999999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=9.1e-12  Score=62.05  Aligned_cols=56  Identities=13%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CcccccchhhhcChhhHHHHHhH-hcCCCC--------CCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRR-THGQES--------CSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~-h~~ek~--------~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .+.|..|++.|.....|..|++. |.++++        |.|..|++.|.....|..|+++|+.++
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   89 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK   89 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            46799999999999999999998 999888        999999999999999999999998764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=49.96  Aligned_cols=34  Identities=24%  Similarity=0.094  Sum_probs=31.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             eeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3499999999999999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.6e-10  Score=50.03  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=32.8

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccch
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCK   41 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~   41 (89)
                      +.|.+|++.|.....|..|+++|+++++|.|..|+
T Consensus        11 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            46999999999999999999999999999999885

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.6e-11  Score=51.51  Aligned_cols=40  Identities=20%  Similarity=0.032  Sum_probs=34.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455643   3599999999999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.01  E-value=5.5e-11  Score=49.40  Aligned_cols=36  Identities=31%  Similarity=0.451  Sum_probs=32.2

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      |+++|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            456789999999999999999999999999988874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.01  E-value=2.5e-10  Score=46.33  Aligned_cols=32  Identities=16%  Similarity=0.203  Sum_probs=21.3

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35666666666666666666666666666664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=4.8e-10  Score=48.72  Aligned_cols=39  Identities=18%  Similarity=0.031  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456654   349999999999999999999999999999964

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.99  E-value=5.3e-10  Score=48.58  Aligned_cols=39  Identities=18%  Similarity=0.046  Sum_probs=33.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455654   349999999999999999999999999999974

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.99  E-value=3e-12  Score=62.45  Aligned_cols=53  Identities=11%  Similarity=0.111  Sum_probs=49.0

Q ss_pred             Cccc--ccchhhhcChhhHHHHHhHhcCCCCCCchH--HHhhhcCCCCCCCCcchhh
Q psy13211         34 PFKC--VVCKQFFATYSGAYQHLRRTHGQESCSSLK--ALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        34 p~~c--~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~~~~~~~~   86 (89)
                      ||.|  ..|+..|.....|..|+++|.++++|.|..  |++.|.....|..|+++|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   57 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA   57 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            6889  899999999999999999999999999988  9999999999888887765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.5e-10  Score=48.32  Aligned_cols=39  Identities=21%  Similarity=0.117  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |..|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            345543   469999999999999999999999999999964

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=6.7e-10  Score=48.25  Aligned_cols=39  Identities=21%  Similarity=0.117  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            445643   459999999999999999999999999999964

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.7e-10  Score=48.01  Aligned_cols=39  Identities=15%  Similarity=0.035  Sum_probs=33.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345543   359999999999999999999999999999964

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.4e-10  Score=47.20  Aligned_cols=36  Identities=22%  Similarity=0.317  Sum_probs=31.7

Q ss_pred             hcCCCCcccc--cchhhhcChhhHHHHHhHhcCCCCCC
Q psy13211         29 HTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESCS   64 (89)
Q Consensus        29 h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek~~~   64 (89)
                      |++++||.|.  .|++.|.....|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5688999999  59999999999999999999998873

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.7e-11  Score=59.61  Aligned_cols=57  Identities=9%  Similarity=0.116  Sum_probs=46.2

Q ss_pred             HHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         26 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        26 ~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      .++|++++||.|..|++.|.....|..|+++|++++||.|..+    .....+..|.+.+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~   73 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYAD   73 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccc
Confidence            4568899999999999999999999999999999999998654    45566666665554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.5e-10  Score=48.21  Aligned_cols=39  Identities=18%  Similarity=0.098  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            445643   349999999999999999999999999999964

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.5e-10  Score=47.83  Aligned_cols=39  Identities=15%  Similarity=0.006  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            345643   359999999999999999999999999999964

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.4e-10  Score=48.56  Aligned_cols=39  Identities=21%  Similarity=0.088  Sum_probs=33.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455654   349999999999999999999999999999964

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.95  E-value=7.6e-10  Score=47.09  Aligned_cols=38  Identities=13%  Similarity=0.038  Sum_probs=32.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   ++|.+|++.|....+|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456643   35999999999999999999999999999884

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7.7e-10  Score=47.98  Aligned_cols=39  Identities=18%  Similarity=0.113  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445643   469999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.1e-09  Score=46.50  Aligned_cols=38  Identities=8%  Similarity=-0.079  Sum_probs=32.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455643   45999999999999999999999999999884

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.8e-10  Score=48.00  Aligned_cols=39  Identities=15%  Similarity=0.084  Sum_probs=33.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            456653   349999999999999999999999999999964

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.4e-12  Score=63.00  Aligned_cols=63  Identities=11%  Similarity=0.038  Sum_probs=38.9

Q ss_pred             HHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         23 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        23 ~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      ..|+.++.+++|+.|..|+..| ....|..|+ .+.+++|+.|..|++.|.. ..|..|.+++.++
T Consensus         6 ~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             SCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             HhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            3455556666666776666666 366666666 6666667767666666553 5666666555443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7e-10  Score=48.16  Aligned_cols=39  Identities=13%  Similarity=-0.035  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445643   469999999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.7e-10  Score=48.21  Aligned_cols=39  Identities=18%  Similarity=0.090  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            445643   469999999999999999999999999999964

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1e-09  Score=47.63  Aligned_cols=39  Identities=15%  Similarity=0.124  Sum_probs=33.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455643   469999999999999999999999999999863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8.7e-10  Score=47.79  Aligned_cols=39  Identities=21%  Similarity=0.068  Sum_probs=33.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345543   359999999999999999999999999999964

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.2e-10  Score=48.11  Aligned_cols=39  Identities=18%  Similarity=0.014  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            345543   469999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.7e-10  Score=48.52  Aligned_cols=39  Identities=13%  Similarity=-0.059  Sum_probs=33.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            455643   459999999999999999999999999999964

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-09  Score=47.20  Aligned_cols=39  Identities=18%  Similarity=0.023  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   ++|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            455643   359999999999999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.1e-10  Score=48.09  Aligned_cols=39  Identities=18%  Similarity=0.085  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            445643   359999999999999999999999999999964

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.3e-09  Score=46.77  Aligned_cols=38  Identities=16%  Similarity=-0.019  Sum_probs=32.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            345543   35999999999999999999999999999884

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8.7e-10  Score=47.84  Aligned_cols=39  Identities=18%  Similarity=0.026  Sum_probs=33.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            345543   469999999999999999999999999999964

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.3e-09  Score=47.34  Aligned_cols=39  Identities=10%  Similarity=-0.142  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455643   359999999999999999999999999999964

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.92  E-value=1.5e-09  Score=46.08  Aligned_cols=37  Identities=11%  Similarity=-0.060  Sum_probs=31.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            345543   3599999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=9.7e-10  Score=47.68  Aligned_cols=39  Identities=18%  Similarity=0.008  Sum_probs=33.4

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455643   459999999999999999999999999999964

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=1.2e-09  Score=46.79  Aligned_cols=33  Identities=9%  Similarity=-0.013  Sum_probs=30.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A           11 FFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             EECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            569999999999999999999999999999863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.1e-09  Score=47.57  Aligned_cols=39  Identities=21%  Similarity=0.141  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345543   459999999999999999999999999999964

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.7e-10  Score=47.71  Aligned_cols=39  Identities=21%  Similarity=0.049  Sum_probs=33.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345543   469999999999999999999999999999964

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.8e-10  Score=47.63  Aligned_cols=39  Identities=18%  Similarity=0.071  Sum_probs=33.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            445643   359999999999999999999999999999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.8e-09  Score=46.39  Aligned_cols=32  Identities=9%  Similarity=0.077  Sum_probs=29.7

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      +.|.+|++.|....+|..|+++|++++||.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           13 SECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            46999999999999999999999999999884

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=7.1e-10  Score=45.55  Aligned_cols=34  Identities=29%  Similarity=0.541  Sum_probs=30.6

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4788999999999999999999999999998864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-09  Score=46.78  Aligned_cols=38  Identities=13%  Similarity=-0.073  Sum_probs=32.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            345543   56999999999999999999999999999884

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-09  Score=47.48  Aligned_cols=38  Identities=16%  Similarity=-0.012  Sum_probs=33.1

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455643   56999999999999999999999999999986

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=46.35  Aligned_cols=37  Identities=24%  Similarity=0.251  Sum_probs=31.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            455643   3599999999999999999999999999987

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=7.9e-10  Score=45.76  Aligned_cols=34  Identities=21%  Similarity=0.485  Sum_probs=30.6

Q ss_pred             HhcCCCCcccccchhhhcCh-hhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATY-SGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~-~~l~~h~~~h~~ek   61 (89)
                      +|++++||.|..|++.|... ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57889999999999999998 99999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=8.7e-10  Score=45.35  Aligned_cols=34  Identities=26%  Similarity=0.514  Sum_probs=30.4

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +|++++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4788999999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.1e-09  Score=44.92  Aligned_cols=34  Identities=15%  Similarity=0.210  Sum_probs=29.7

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +|++++||.|.+|++.|.....|..|+++|++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678889999999999999999999999998864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=46.59  Aligned_cols=38  Identities=11%  Similarity=-0.030  Sum_probs=32.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            455643   45999999999999999999999999999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.2e-09  Score=46.49  Aligned_cols=37  Identities=22%  Similarity=0.239  Sum_probs=31.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            445643   4699999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=46.60  Aligned_cols=38  Identities=8%  Similarity=-0.059  Sum_probs=32.5

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            445643   35999999999999999999999999999884

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=46.96  Aligned_cols=38  Identities=11%  Similarity=-0.006  Sum_probs=32.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            456653   45999999999999999999999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9.3e-10  Score=47.78  Aligned_cols=39  Identities=15%  Similarity=0.031  Sum_probs=33.2

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345543   459999999999999999999999999999863

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.9e-09  Score=45.34  Aligned_cols=32  Identities=16%  Similarity=0.173  Sum_probs=28.8

Q ss_pred             hcCCCCccccc--chhhhcChhhHHHHHhHhcCC
Q psy13211         29 HTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        29 h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +.+++||.|..  |++.|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            57889999986  999999999999999999886

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=46.53  Aligned_cols=37  Identities=19%  Similarity=0.106  Sum_probs=31.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            445643   4699999999999999999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.4e-09  Score=44.75  Aligned_cols=34  Identities=12%  Similarity=0.247  Sum_probs=30.2

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      .|++++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4678899999999999999999999999988764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-09  Score=46.72  Aligned_cols=39  Identities=15%  Similarity=0.006  Sum_probs=33.1

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345543   459999999999999999999999999999963

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=4.2e-10  Score=46.78  Aligned_cols=34  Identities=12%  Similarity=0.219  Sum_probs=28.6

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHH-HhHhcCC
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQH-LRRTHGQ   60 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h-~~~h~~e   60 (89)
                      ++|++++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            357888899999999999999999999 7888764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.5e-09  Score=47.08  Aligned_cols=38  Identities=18%  Similarity=-0.008  Sum_probs=32.8

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcC-CCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTG-RKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~-~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++ ++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455644   3599999999999999999999999 9999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.2e-09  Score=46.33  Aligned_cols=33  Identities=21%  Similarity=0.071  Sum_probs=30.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCccccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVV   39 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~   39 (89)
                      +.|.+|++.|....+|..|+++|++++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A           13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             ccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            359999999999999999999999999999863

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.3e-09  Score=44.03  Aligned_cols=34  Identities=24%  Similarity=0.433  Sum_probs=29.7

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3678889999999999999999999999998864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.82  E-value=1.1e-09  Score=48.15  Aligned_cols=35  Identities=20%  Similarity=0.463  Sum_probs=28.6

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHh-HhcCCCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLR-RTHGQES   62 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~   62 (89)
                      +|++++||.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788999999999999999999999999 8888754

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.2e-09  Score=46.29  Aligned_cols=33  Identities=27%  Similarity=0.259  Sum_probs=30.7

Q ss_pred             CCc--cchhhcccHHHHHHHHHHhcCCCCcccccc
Q psy13211          8 KST--DIQVRMFRIHIIRNHYRKHTGRKPFKCVVC   40 (89)
Q Consensus         8 ~~~--~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c   40 (89)
                      .|.  +|++.|.....|..|+++|++++||.|..|
T Consensus        14 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           14 ACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             ECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             ECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            487  899999999999999999999999999876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=46.58  Aligned_cols=38  Identities=13%  Similarity=0.021  Sum_probs=32.3

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445543   35999999999999999999999999999884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5e-09  Score=44.98  Aligned_cols=37  Identities=11%  Similarity=0.011  Sum_probs=31.7

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            455643   3599999999999999999999999999976

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.79  E-value=6.7e-10  Score=51.42  Aligned_cols=47  Identities=11%  Similarity=0.046  Sum_probs=38.1

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhH
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGA   50 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l   50 (89)
                      |.+|..   +.|.+|++.|.....|.   ++|++++||.|..|+..|....++
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            6 ERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             SSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             HHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            345543   35999999999988776   789999999999999999876654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=46.33  Aligned_cols=38  Identities=11%  Similarity=-0.018  Sum_probs=32.6

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |.+|..   +.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455643   35999999999999999999999999999985

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.77  E-value=7.6e-09  Score=41.77  Aligned_cols=30  Identities=13%  Similarity=0.104  Sum_probs=28.0

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFK   36 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~   36 (89)
                      +.|.+|++.|....+|..|+++|++++||.
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            579999999999999999999999999874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.1e-09  Score=45.47  Aligned_cols=31  Identities=19%  Similarity=0.162  Sum_probs=28.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKC   37 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c   37 (89)
                      +.|.+|++.|....+|..|+++|++++||.|
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           11 YECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             eECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3599999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.73  E-value=9.9e-12  Score=56.13  Aligned_cols=48  Identities=8%  Similarity=0.021  Sum_probs=42.1

Q ss_pred             hhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         42 QFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        42 ~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      +.|.....|..|+++|+++++|.|..|++.|.....|..|+++|+.++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            456677778889999999999999999999999999999999888764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.72  E-value=6.7e-09  Score=42.98  Aligned_cols=33  Identities=24%  Similarity=0.415  Sum_probs=28.9

Q ss_pred             hcCCCCcccc--cchhhhcChhhHHHHHhHhcCCC
Q psy13211         29 HTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        29 h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      |++++||.|.  .|++.|.....|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            6788999998  49999999999999999998874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.71  E-value=4.3e-10  Score=45.30  Aligned_cols=31  Identities=16%  Similarity=0.333  Sum_probs=21.4

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQESC   63 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~   63 (89)
                      +||.|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3666777777777777777777777776665

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=1.8e-10  Score=57.08  Aligned_cols=49  Identities=6%  Similarity=0.047  Sum_probs=40.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      +.|.+|++.|....+|..|+++|++++||.|..|.    ....+..|++.+.+
T Consensus        26 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           26 YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            34999999999999999999999999999997654    44555567777776

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=3.2e-09  Score=44.14  Aligned_cols=26  Identities=23%  Similarity=0.318  Sum_probs=23.5

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHH
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHL   54 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~   54 (89)
                      +.|++||.|.+|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46889999999999999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=2.5e-08  Score=40.98  Aligned_cols=34  Identities=6%  Similarity=-0.026  Sum_probs=28.9

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHHHHHhcCCCC
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNHYRKHTGRKP   34 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h~~~h~~~~p   34 (89)
                      |.+|..   +.|.+|++.|....+|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            566654   3599999999999999999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.64  E-value=1.3e-08  Score=42.48  Aligned_cols=32  Identities=6%  Similarity=0.006  Sum_probs=29.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      +.|.+|++.|.....|..|+++|++++||.+.
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            46999999999999999999999999998763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=3.1e-08  Score=46.86  Aligned_cols=33  Identities=12%  Similarity=0.042  Sum_probs=28.9

Q ss_pred             CCCcc--chhhcccHHHHHHHH-HHhcCCCCccccc
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHY-RKHTGRKPFKCVV   39 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~-~~h~~~~p~~c~~   39 (89)
                      ++|.+  |+++|.+.++|..|+ ++|++++|+.|..
T Consensus        28 YkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           28 YRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             eECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            34865  999999999999997 6899999998864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=3.1e-08  Score=46.47  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=29.3

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      +.+++||.|..|++.|.....|..|+++|+++..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            5678899999999999999999999999988654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.60  E-value=2.2e-08  Score=38.96  Aligned_cols=28  Identities=25%  Similarity=0.618  Sum_probs=19.7

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777766665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.57  E-value=4.1e-08  Score=37.93  Aligned_cols=27  Identities=30%  Similarity=0.568  Sum_probs=15.2

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.57  E-value=3e-08  Score=38.37  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=21.3

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46777777777777777777777777653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=5.3e-08  Score=38.66  Aligned_cols=30  Identities=17%  Similarity=0.497  Sum_probs=22.8

Q ss_pred             CCCcccc--cchhhhcChhhHHHHHhHhcCCC
Q psy13211         32 RKPFKCV--VCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        32 ~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3677887  78888888888888888777753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.54  E-value=5.4e-08  Score=37.78  Aligned_cols=28  Identities=25%  Similarity=0.506  Sum_probs=17.4

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      ||.|..|+..|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5566666666666666666666665554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.54  E-value=1.8e-08  Score=43.88  Aligned_cols=37  Identities=22%  Similarity=0.442  Sum_probs=31.6

Q ss_pred             HHHHhcCCCCcccc--cchhhhcChhhHHHHHhHhcCCC
Q psy13211         25 HYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        25 h~~~h~~~~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +...|++++||.|.  .|++.|.....|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34568899999995  79999999999999999998874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=4.1e-08  Score=37.90  Aligned_cols=27  Identities=37%  Similarity=0.704  Sum_probs=14.6

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ||.|..|+..|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=4.5e-08  Score=37.72  Aligned_cols=29  Identities=24%  Similarity=0.403  Sum_probs=19.8

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +||.|..|+..|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            36677777777777777777777766653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.50  E-value=4e-10  Score=46.66  Aligned_cols=36  Identities=8%  Similarity=-0.014  Sum_probs=31.7

Q ss_pred             HHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         53 HLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        53 h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      |+++|++++||.|..|++.|.....|..|.++|..+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567899999999999999999999999998887653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.48  E-value=7.3e-08  Score=37.99  Aligned_cols=27  Identities=30%  Similarity=0.645  Sum_probs=16.5

Q ss_pred             Ccccc--cchhhhcChhhHHHHHhHhcCC
Q psy13211         34 PFKCV--VCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        34 p~~c~--~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            55665  5666666666666666666554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-08  Score=39.29  Aligned_cols=27  Identities=33%  Similarity=0.765  Sum_probs=13.4

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            444555555555555555555444443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.3e-08  Score=48.81  Aligned_cols=52  Identities=13%  Similarity=0.149  Sum_probs=45.0

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      .|..|++.|. ...|..|+ .+.+++|+.|..|+..|. ...|..|++++++++.
T Consensus        19 ~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           19 VCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             ECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             CCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            3999999994 78899999 899999999999999887 4889999998887643

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=39.35  Aligned_cols=27  Identities=33%  Similarity=0.748  Sum_probs=13.4

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      +||.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            344555555555555555555444444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.42  E-value=5.4e-09  Score=41.91  Aligned_cols=29  Identities=10%  Similarity=0.086  Sum_probs=27.1

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPF   35 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~   35 (89)
                      +.|.+|++.|...++|..|+++|++++|+
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            67999999999999999999999999886

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=9.4e-08  Score=36.67  Aligned_cols=27  Identities=26%  Similarity=0.551  Sum_probs=19.1

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhc
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            356777777777777777777776654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.40  E-value=1.4e-07  Score=38.05  Aligned_cols=28  Identities=14%  Similarity=0.112  Sum_probs=25.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKP   34 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p   34 (89)
                      +.|.+|++.|....+|..|+++|++++|
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            8 YVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             eECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4699999999999999999999998875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=1e-07  Score=37.06  Aligned_cols=28  Identities=21%  Similarity=0.507  Sum_probs=19.0

Q ss_pred             CCcccccchhhhcChhhHHHH-HhHhcCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQH-LRRTHGQ   60 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h-~~~h~~e   60 (89)
                      +||.|..|+..|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            366777777777777777777 5666665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=1.5e-07  Score=36.19  Aligned_cols=28  Identities=21%  Similarity=0.322  Sum_probs=25.1

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      .+.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            4679999999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.8e-08  Score=38.36  Aligned_cols=30  Identities=13%  Similarity=0.194  Sum_probs=27.3

Q ss_pred             CCCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         60 QESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        60 ek~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      ++||.|..|++.|.....|..|+++|..++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=1.4e-07  Score=35.94  Aligned_cols=25  Identities=40%  Similarity=0.774  Sum_probs=17.0

Q ss_pred             CCcccccchhhhcChhhHHHHHhHh
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5667777777777777777666654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.37  E-value=1.4e-07  Score=35.74  Aligned_cols=25  Identities=28%  Similarity=0.581  Sum_probs=12.6

Q ss_pred             cccccchhhhcChhhHHHHHhHhcC
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      |.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4455555555555555555544443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.2e-07  Score=36.17  Aligned_cols=26  Identities=19%  Similarity=0.600  Sum_probs=19.3

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHh
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35777888888888777777777655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.34  E-value=4.8e-07  Score=34.72  Aligned_cols=27  Identities=26%  Similarity=0.331  Sum_probs=24.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            679999999999999999999998763

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.32  E-value=2e-07  Score=37.66  Aligned_cols=28  Identities=11%  Similarity=-0.072  Sum_probs=25.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKP   34 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p   34 (89)
                      +.|.+|++.|.....|..|+++|++++|
T Consensus         8 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            8 FVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4599999999999999999999998875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=2.2e-09  Score=44.36  Aligned_cols=35  Identities=3%  Similarity=-0.206  Sum_probs=31.3

Q ss_pred             hHhcCCCCCCchHHHhhhcCC-CCCCCCcchhhhcC
Q psy13211         55 RRTHGQESCSSLKALRKLRGP-KPKPDSTRSLRKKK   89 (89)
Q Consensus        55 ~~h~~ek~~~c~~~~~~~~~~-~~~~~~~~~~~~~~   89 (89)
                      ++|++++||.|..|++.|... ..|..|+++|..++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            367899999999999999999 89999999988765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=7.3e-07  Score=36.53  Aligned_cols=32  Identities=9%  Similarity=0.065  Sum_probs=27.1

Q ss_pred             CcccCC---CCCccchhhcccHHHHHHH-HHHhcCC
Q psy13211          1 MFFHGK---TKSTDIQVRMFRIHIIRNH-YRKHTGR   32 (89)
Q Consensus         1 ~~~~~~---~~~~~c~~~f~~~~~l~~h-~~~h~~~   32 (89)
                      |.+|..   ++|.+|++.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            667764   3499999999999999999 8899875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=7.9e-08  Score=37.21  Aligned_cols=29  Identities=10%  Similarity=0.171  Sum_probs=26.5

Q ss_pred             CCCCchHHHhhhcCCCCCCCCcchhhhcC
Q psy13211         61 ESCSSLKALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        61 k~~~c~~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      +||.|..|++.|.....|..|+++|..+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.27  E-value=4.9e-07  Score=34.89  Aligned_cols=28  Identities=7%  Similarity=0.140  Sum_probs=25.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKP   34 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p   34 (89)
                      +.|.+|++.|.....|..|+++|.++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            6799999999999999999999988754

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=7.2e-07  Score=36.10  Aligned_cols=27  Identities=11%  Similarity=0.017  Sum_probs=24.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A           10 HLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             eecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            569999999999999999999998864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=3.8e-07  Score=37.53  Aligned_cols=29  Identities=21%  Similarity=0.104  Sum_probs=26.3

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCCCc
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRKPF   35 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~p~   35 (89)
                      +.|.  +|++.|....+|..|+++|++++||
T Consensus         7 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            7 FLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             EECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             eECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4588  5999999999999999999999886

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.21  E-value=4.8e-07  Score=34.19  Aligned_cols=26  Identities=15%  Similarity=0.132  Sum_probs=23.0

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            57999999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=6.1e-07  Score=34.59  Aligned_cols=27  Identities=11%  Similarity=-0.032  Sum_probs=24.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            569999999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.19  E-value=7.9e-07  Score=34.82  Aligned_cols=27  Identities=33%  Similarity=0.361  Sum_probs=24.0

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.  +|++.|.....|..|+++|++++
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            5676  99999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=6e-07  Score=34.34  Aligned_cols=27  Identities=11%  Similarity=0.242  Sum_probs=24.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            579999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=4e-09  Score=46.06  Aligned_cols=38  Identities=3%  Similarity=0.064  Sum_probs=33.1

Q ss_pred             HHHhHhcCCCCCCch--HHHhhhcCCCCCCCCcchhhhcC
Q psy13211         52 QHLRRTHGQESCSSL--KALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        52 ~h~~~h~~ek~~~c~--~~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .+...|++++||.|.  .|++.|.....|..|+++|+.+|
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344569999999995  79999999999999999998775

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=9.3e-07  Score=36.91  Aligned_cols=26  Identities=15%  Similarity=0.096  Sum_probs=23.4

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      ++|.+  |+++|...++|..|+++|+++
T Consensus        10 ~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A           10 LKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             EECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            35886  999999999999999999986

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=9.3e-07  Score=35.83  Aligned_cols=27  Identities=22%  Similarity=0.166  Sum_probs=24.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A           10 FTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             EECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            459999999999999999999998864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1e-06  Score=35.63  Aligned_cols=27  Identities=30%  Similarity=0.267  Sum_probs=24.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A           10 YKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            459999999999999999999998864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.5e-07  Score=34.84  Aligned_cols=20  Identities=25%  Similarity=0.537  Sum_probs=8.0

Q ss_pred             cccccchhhhcChhhHHHHH
Q psy13211         35 FKCVVCKQFFATYSGAYQHL   54 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~   54 (89)
                      |.|..|++.|.....|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHI   22 (26)
Confidence            33444444444444443333

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.15  E-value=4.1e-07  Score=34.95  Aligned_cols=27  Identities=19%  Similarity=0.238  Sum_probs=24.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            469999999999999999999998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.9e-07  Score=34.66  Aligned_cols=26  Identities=4%  Similarity=0.038  Sum_probs=23.6

Q ss_pred             CCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         61 ESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        61 k~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      +||.|..|++.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999998763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.1e-06  Score=35.60  Aligned_cols=27  Identities=15%  Similarity=0.155  Sum_probs=24.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A           10 FKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             EECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            459999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=6.7e-07  Score=36.27  Aligned_cols=27  Identities=7%  Similarity=-0.123  Sum_probs=24.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..|+++|++++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A           10 YDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            459999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=1.5e-06  Score=34.17  Aligned_cols=27  Identities=15%  Similarity=0.207  Sum_probs=24.2

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.  +|++.|.....|..|+++|++++
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5788  89999999999999999998864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.04  E-value=1.9e-06  Score=32.93  Aligned_cols=25  Identities=16%  Similarity=0.323  Sum_probs=13.7

Q ss_pred             Ccccc--cchhhhcChhhHHHHHhHhc
Q psy13211         34 PFKCV--VCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        34 p~~c~--~c~~~f~~~~~l~~h~~~h~   58 (89)
                      ||.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.00  E-value=4.6e-06  Score=38.99  Aligned_cols=27  Identities=11%  Similarity=-0.018  Sum_probs=24.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|++.|....+|..|+++|+++.
T Consensus        14 y~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           14 LPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            569999999999999999999999864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=1.2e-06  Score=33.80  Aligned_cols=27  Identities=15%  Similarity=0.156  Sum_probs=23.8

Q ss_pred             CCCccchhhcccHHHHHHH-HHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNH-YRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h-~~~h~~~~   33 (89)
                      +.|.+|++.|.....|..| +++|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             cCCcccCcccCChHHHHHHHHHHccCCC
Confidence            6799999999999999999 68888763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.97  E-value=1.7e-06  Score=35.70  Aligned_cols=25  Identities=8%  Similarity=0.150  Sum_probs=21.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      ++|.+|+++|.+.++|..|+       ||.|.
T Consensus         9 ~~C~~CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            9 FMCLPCGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             CEETTTTEECSCHHHHHHHH-------HHTST
T ss_pred             eECCCCCCccCCHhHccCcC-------CeECc
Confidence            46999999999999999998       67765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.96  E-value=1.8e-06  Score=32.86  Aligned_cols=25  Identities=32%  Similarity=0.424  Sum_probs=22.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~   31 (89)
                      +.|.+|++.|.....|..|+++|++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999988764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.3e-06  Score=31.84  Aligned_cols=24  Identities=17%  Similarity=0.159  Sum_probs=21.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      +.|.+|++.|.....|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            4 FSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHCC
T ss_pred             ccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999998874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.94  E-value=3.7e-06  Score=34.30  Aligned_cols=27  Identities=22%  Similarity=0.231  Sum_probs=23.5

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.  .|++.|...+.|..|+++|++++
T Consensus         9 ~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            9 HICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            3488  59999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.92  E-value=2.1e-05  Score=36.44  Aligned_cols=51  Identities=14%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             CCCccchhhcccHHHHHHHHH-HhcCCC------Ccccc--cchhhhcChhhHHHHHhHh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR-KHTGRK------PFKCV--VCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~-~h~~~~------p~~c~--~c~~~f~~~~~l~~h~~~h   57 (89)
                      ..+..|++.|.....|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            356779999999999999984 787765      78896  8998888888999998754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.89  E-value=3.5e-06  Score=36.60  Aligned_cols=28  Identities=14%  Similarity=0.056  Sum_probs=23.2

Q ss_pred             CCCccchhhcccHHHHHHHHH-HhcCCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR-KHTGRKP   34 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~-~h~~~~p   34 (89)
                      +.|.+|++.|....+|..|++ +|+++.+
T Consensus         8 ~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            8 YACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             EECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            459999999999999999999 8988754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.79  E-value=3.3e-06  Score=31.94  Aligned_cols=24  Identities=13%  Similarity=0.174  Sum_probs=21.2

Q ss_pred             CCCccchhhcccHHHHHHHHHHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      +.|.+|++.|.....|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcC
Confidence            569999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=7.1e-06  Score=31.18  Aligned_cols=25  Identities=16%  Similarity=0.154  Sum_probs=22.1

Q ss_pred             CCCc--cchhhcccHHHHHHHHHHhcC
Q psy13211          7 TKST--DIQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         7 ~~~~--~c~~~f~~~~~l~~h~~~h~~   31 (89)
                      +.|.  +|++.|...+.|..|+++|++
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            4688  999999999999999998864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.14  E-value=6.2e-05  Score=39.30  Aligned_cols=29  Identities=21%  Similarity=0.575  Sum_probs=25.6

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhH
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRR   56 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~   56 (89)
                      .++|++||.|..|++.|.....|..|.++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            46788999999999999999999999763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.21  E-value=3.4e-05  Score=40.27  Aligned_cols=31  Identities=16%  Similarity=0.026  Sum_probs=27.1

Q ss_pred             hHhcCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211         55 RRTHGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus        55 ~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      ..++|+++|.|..|++.|...+.|..|.++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4688999999999999999999998887653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.67  E-value=0.0097  Score=25.67  Aligned_cols=23  Identities=13%  Similarity=0.224  Sum_probs=17.0

Q ss_pred             CCCCCccchhhcccHHHHHHHHH
Q psy13211          5 GKTKSTDIQVRMFRIHIIRNHYR   27 (89)
Q Consensus         5 ~~~~~~~c~~~f~~~~~l~~h~~   27 (89)
                      +++.|+-|+..|.....|..|+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45667778877877777777775

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.12  E-value=0.00019  Score=33.18  Aligned_cols=45  Identities=9%  Similarity=0.018  Sum_probs=31.8

Q ss_pred             cchhhhcChhhHHHHH-hHhcCCC------CCCch--HHHhhhcCCCCCCCCcc
Q psy13211         39 VCKQFFATYSGAYQHL-RRTHGQE------SCSSL--KALRKLRGPKPKPDSTR   83 (89)
Q Consensus        39 ~c~~~f~~~~~l~~h~-~~h~~ek------~~~c~--~~~~~~~~~~~~~~~~~   83 (89)
                      .|+..|.....|..|+ ..|.+.+      +|.|.  .|.+.+.+...|..|++
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            4889999999999998 4787765      78885  66665554444444443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.41  E-value=0.047  Score=28.43  Aligned_cols=20  Identities=15%  Similarity=0.110  Sum_probs=17.3

Q ss_pred             CCCccchhhcccHHHHHHHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHY   26 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~   26 (89)
                      ..|..|...|...+.+..|.
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHH
T ss_pred             CcCcCCCCEeCCHHHHHHHH
Confidence            45999999999988888887

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.71  E-value=0.063  Score=23.14  Aligned_cols=29  Identities=14%  Similarity=0.141  Sum_probs=24.3

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      .++.|+.|+..|.....|..|++--.++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            57899999999999999999988555443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.01  E-value=0.4  Score=19.35  Aligned_cols=23  Identities=17%  Similarity=0.209  Sum_probs=13.1

Q ss_pred             CcccccchhhhcChhhHHHHHhH
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRR   56 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~   56 (89)
                      .+.|..|.-.|.....+..|.+.
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhee
Confidence            44566666666655555555543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.72  E-value=0.032  Score=26.70  Aligned_cols=38  Identities=11%  Similarity=0.188  Sum_probs=21.3

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFAT   46 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~   46 (89)
                      .|..|+.++.- ..+..|...-.+...+.|..|+..|..
T Consensus        12 ~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A           12 TCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             EESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             EcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC
Confidence            46666655533 345666544334345667777776654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=87.54  E-value=0.18  Score=27.27  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=16.3

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCCCchHHH
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKAL   69 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~   69 (89)
                      +..|..|+..+ ....+..|....-..++-.|..|+
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~  144 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCA  144 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTC
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCC
Confidence            34455555444 333455555444444444454443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.83  E-value=0.28  Score=19.57  Aligned_cols=22  Identities=18%  Similarity=0.510  Sum_probs=19.1

Q ss_pred             CcccccchhhhcChhhHHHHHh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      .|.|++|.+.+.....|..|-.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            5889999999999999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	89
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-06
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 61
          R H+G KP++C +C   F        H+ + H + 
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.4 bits (69), Expect = 0.003
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG 59
          R HTG KP+ C  C + F        H +R H 
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.3 bits (69), Expect = 0.003
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 29 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 61
          H+G KP+ CV C + F+  S   QH +R H  E
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQH-QRVHTGE 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	89
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.67
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.47
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.35
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.29
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.19
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.19
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.11
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.09
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.05
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.01
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.92
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.9
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.88
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.43
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.41
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.36
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.33
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.31
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.27
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.13
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.06
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.93
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.92
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.55
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.25
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.04
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.02
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.93
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.85
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.84
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.77
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.67
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.41
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.34
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.93
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.85
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.83
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.59
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.49
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.29
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.92
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.05
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.61
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.6
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.68
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.67
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.22
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.13
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.86
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.23

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.5e-18  Score=75.74  Aligned_cols=50  Identities=18%  Similarity=0.291  Sum_probs=42.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCCCcccccchhhhcChhhHHHHHhHh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      ++| +|+++|....+|..|+++|+|++||.|.+|++.|.....|..|+++|
T Consensus         4 y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            468 58888888888888888888888888888888888888888888765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.1e-19  Score=80.18  Aligned_cols=53  Identities=15%  Similarity=0.188  Sum_probs=50.0

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchh
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSL   85 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~   85 (89)
                      |+||.| .||+.|.....|..|+++|++++||.|..|++.|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 59999999999999999999999999999999999999998888765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.5e-15  Score=63.24  Aligned_cols=36  Identities=25%  Similarity=0.468  Sum_probs=34.1

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      |+.+|++++||.|.+|++.|...++|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            667899999999999999999999999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8.5e-15  Score=60.93  Aligned_cols=36  Identities=17%  Similarity=0.322  Sum_probs=30.8

Q ss_pred             CCCCcccccchhhhcChhhHHHHHh-HhcCCCCCCch
Q psy13211         31 GRKPFKCVVCKQFFATYSGAYQHLR-RTHGQESCSSL   66 (89)
Q Consensus        31 ~~~p~~c~~c~~~f~~~~~l~~h~~-~h~~ek~~~c~   66 (89)
                      .++||.|.+|++.|....+|..|++ +|++|+||+|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4688999999999999999999975 79999999885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=9.4e-15  Score=58.67  Aligned_cols=33  Identities=39%  Similarity=0.694  Sum_probs=31.5

Q ss_pred             HhcCCCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         28 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        28 ~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +|+|++||.|.+|++.|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.1e-13  Score=56.72  Aligned_cols=34  Identities=35%  Similarity=0.687  Sum_probs=31.7

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ++|+|++||.|.+|++.|...+.|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4799999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=7.3e-14  Score=57.64  Aligned_cols=35  Identities=31%  Similarity=0.478  Sum_probs=31.9

Q ss_pred             HHHHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211         25 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        25 h~~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      |.++|+|++||.|..|++.|...++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56789999999999999999999999999998865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5.2e-13  Score=55.41  Aligned_cols=33  Identities=24%  Similarity=0.373  Sum_probs=30.1

Q ss_pred             CCCccchhhcccHHHHHHHHH-HhcCCCCccccc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR-KHTGRKPFKCVV   39 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~-~h~~~~p~~c~~   39 (89)
                      ++|.+|+++|...++|..|++ +|+|++||.|.+
T Consensus         6 y~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             ccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            579999999999999999976 799999999964

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=7.8e-13  Score=53.60  Aligned_cols=33  Identities=27%  Similarity=0.635  Sum_probs=30.5

Q ss_pred             hcCCCCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         29 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        29 h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      |+|++||.|.+|++.|....+|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999998753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.24  E-value=1.7e-12  Score=50.57  Aligned_cols=29  Identities=28%  Similarity=0.574  Sum_probs=20.1

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +||.|.+|++.|...+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46677777777777777777777777664

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.3e-12  Score=50.08  Aligned_cols=29  Identities=21%  Similarity=0.497  Sum_probs=21.1

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +||.|.+|++.|...+.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=3e-12  Score=49.34  Aligned_cols=28  Identities=32%  Similarity=0.752  Sum_probs=23.1

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      |+||.|.+|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888876

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.9e-12  Score=51.84  Aligned_cols=27  Identities=11%  Similarity=0.278  Sum_probs=18.1

Q ss_pred             chhhcccHHHHHHHHHHhcCCCCcccc
Q psy13211         12 IQVRMFRIHIIRNHYRKHTGRKPFKCV   38 (89)
Q Consensus        12 c~~~f~~~~~l~~h~~~h~~~~p~~c~   38 (89)
                      |+++|....+|..|+++|+|++||.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            666666666666666666666666663

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.4e-12  Score=52.59  Aligned_cols=33  Identities=30%  Similarity=0.736  Sum_probs=28.7

Q ss_pred             HHhcCCCCcccccchhhhcChhhHHHHHhHhcC
Q psy13211         27 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        27 ~~h~~~~p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      ++|+|++||.|..|++.|....+|..|++.+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            368999999999999999999999999765443

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3e-14  Score=59.18  Aligned_cols=37  Identities=3%  Similarity=-0.011  Sum_probs=34.2

Q ss_pred             HHHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         52 QHLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        52 ~h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      +|+++|++|+||.|..|++.|.....|..|+++|+.|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4678999999999999999999999999999999865

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.7e-11  Score=49.93  Aligned_cols=32  Identities=16%  Similarity=0.296  Sum_probs=29.3

Q ss_pred             ccccc--chhhhcChhhHHHHHhHhcCCCCCCch
Q psy13211         35 FKCVV--CKQFFATYSGAYQHLRRTHGQESCSSL   66 (89)
Q Consensus        35 ~~c~~--c~~~f~~~~~l~~h~~~h~~ek~~~c~   66 (89)
                      |.|..  |++.|.....|..|+++|+||+||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56765  999999999999999999999999995

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=1.2e-13  Score=57.00  Aligned_cols=35  Identities=9%  Similarity=0.002  Sum_probs=31.9

Q ss_pred             HHhHhcCCCCCCchHHHhhhcCCCCCCCCcchhhh
Q psy13211         53 HLRRTHGQESCSSLKALRKLRGPKPKPDSTRSLRK   87 (89)
Q Consensus        53 h~~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~   87 (89)
                      |.++|+||+||+|..|++.|.....|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56899999999999999999999999999988853

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.1e-13  Score=55.52  Aligned_cols=33  Identities=6%  Similarity=0.059  Sum_probs=31.1

Q ss_pred             HhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         56 RTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        56 ~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      +|+||+||.|..|++.|...+.|..|+++|+.|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.05  E-value=5e-11  Score=46.27  Aligned_cols=27  Identities=26%  Similarity=0.331  Sum_probs=25.5

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|.+|+++|.+.++|..|+++|+||+
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CCCCCCCCCCCCchHcccccCcccCCC
Confidence            679999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.5e-13  Score=56.30  Aligned_cols=34  Identities=9%  Similarity=0.114  Sum_probs=31.7

Q ss_pred             hHhcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         55 RRTHGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        55 ~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      ++|+||+||+|..|++.|.....|..|+++|..+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999998765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=3.1e-11  Score=45.43  Aligned_cols=26  Identities=38%  Similarity=0.775  Sum_probs=17.8

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhc
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      +||.|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46677777777777777777766664

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.9e-11  Score=46.23  Aligned_cols=28  Identities=21%  Similarity=0.398  Sum_probs=26.0

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      .+.|++|+++|.+.++|..|+++|+|++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            3689999999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.01  E-value=3.1e-11  Score=51.97  Aligned_cols=38  Identities=18%  Similarity=0.380  Sum_probs=32.5

Q ss_pred             HHHHHHhcCCCCccccc--chhhhcChhhHHHHHhHhcCCC
Q psy13211         23 RNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        23 ~~h~~~h~~~~p~~c~~--c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      ..|+ .|+|++||.|..  |++.|...++|..|+++|+||+
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3444 589999999976  9999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=4.6e-13  Score=54.30  Aligned_cols=32  Identities=6%  Similarity=0.032  Sum_probs=30.2

Q ss_pred             hcCCCCCCchHHHhhhcCCCCCCCCcchhhhc
Q psy13211         57 THGQESCSSLKALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        57 h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      ++||+||+|..|++.|++..+|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999865

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3e-10  Score=44.25  Aligned_cols=28  Identities=32%  Similarity=0.761  Sum_probs=17.6

Q ss_pred             CCccccc--chhhhcChhhHHHHHhHhcCC
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +||.|..  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4566655  666666666666666666664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.2e-12  Score=53.48  Aligned_cols=32  Identities=6%  Similarity=0.036  Sum_probs=28.2

Q ss_pred             hHhcCCCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         55 RRTHGQESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        55 ~~h~~ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      ++|+||+||+|..|++.|.+..+|..|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            47999999999999999999999999975443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=2.3e-10  Score=43.92  Aligned_cols=25  Identities=24%  Similarity=0.266  Sum_probs=23.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~   31 (89)
                      ++|.+|+++|.+.++|..|+++|+|
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             ccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.8e-10  Score=43.99  Aligned_cols=28  Identities=32%  Similarity=0.657  Sum_probs=20.2

Q ss_pred             CCccccc--chhhhcChhhHHHHHhHhcCC
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +||.|..  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677755  777777777777777777765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.5e-10  Score=43.44  Aligned_cols=29  Identities=28%  Similarity=0.645  Sum_probs=19.2

Q ss_pred             CCcccc--cchhhhcChhhHHHHHhHhcCCC
Q psy13211         33 KPFKCV--VCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        33 ~p~~c~--~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +||.|.  .|++.|...++|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466664  47777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.2e-10  Score=42.23  Aligned_cols=24  Identities=25%  Similarity=0.152  Sum_probs=22.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      ++|++||++|...++|..|+++|+
T Consensus         3 y~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCccCCC
Confidence            579999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=5e-12  Score=54.53  Aligned_cols=40  Identities=3%  Similarity=0.029  Sum_probs=34.9

Q ss_pred             hHHHHHhHhcCCCCCCchH--HHhhhcCCCCCCCCcchhhhcC
Q psy13211         49 GAYQHLRRTHGQESCSSLK--ALRKLRGPKPKPDSTRSLRKKK   89 (89)
Q Consensus        49 ~l~~h~~~h~~ek~~~c~~--~~~~~~~~~~~~~~~~~~~~~~   89 (89)
                      .+..|+ .|++|+||.|..  |++.|.....|..|+++|+.||
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344555 499999999976  9999999999999999999886

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.4e-09  Score=40.56  Aligned_cols=26  Identities=31%  Similarity=0.436  Sum_probs=23.9

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +.|.+  |+++|...++|..|+++|+||
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             eeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            56877  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7.8e-09  Score=40.45  Aligned_cols=27  Identities=30%  Similarity=0.348  Sum_probs=23.9

Q ss_pred             CCC--ccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKS--TDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~--~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|  ..|+++|...++|..|+++|+|++
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            456  469999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.1e-09  Score=40.25  Aligned_cols=26  Identities=31%  Similarity=0.239  Sum_probs=23.2

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +.|++  |+++|...++|..|+++|+||
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             ccCCCCCCCceECcHHHcCccccccCCC
Confidence            35766  999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.8e-08  Score=39.62  Aligned_cols=29  Identities=17%  Similarity=0.529  Sum_probs=22.7

Q ss_pred             CCCccccc--chhhhcChhhHHHHHhHhcCC
Q psy13211         32 RKPFKCVV--CKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        32 ~~p~~c~~--c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      |+||.|..  |++.|...++|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888876  888888888888888887753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=8.2e-09  Score=39.71  Aligned_cols=27  Identities=30%  Similarity=0.754  Sum_probs=18.5

Q ss_pred             CCccccc--chhhhcChhhHHHHHhHhcC
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~~~h~~   59 (89)
                      +||.|..  |++.|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666755  77777777777777777664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.8e-08  Score=35.70  Aligned_cols=24  Identities=29%  Similarity=0.318  Sum_probs=21.1

Q ss_pred             CCccchhhcccHHHHHHHHHHhcC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~   31 (89)
                      +|.+|++.|+.+..|..|++.|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            688999999999999999988875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=6.3e-08  Score=37.17  Aligned_cols=30  Identities=17%  Similarity=0.406  Sum_probs=19.9

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcCCCCC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHGQESC   63 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~ek~~   63 (89)
                      ...|.+||+.|..-..|.+|...|.+|+||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666677776666666666666676666

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=6.2e-08  Score=35.87  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=23.8

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhc
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      ++||.|..||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            579999999999999999999888774

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=5.5e-08  Score=36.98  Aligned_cols=26  Identities=23%  Similarity=0.585  Sum_probs=16.1

Q ss_pred             CCccccc--chhhhcChhhHHHHHhHhc
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~~~h~   58 (89)
                      +||.|..  |++.|...++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4566654  6666666666666666653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.36  E-value=1.3e-09  Score=42.94  Aligned_cols=29  Identities=10%  Similarity=0.011  Sum_probs=26.8

Q ss_pred             CCCCCchH--HHhhhcCCCCCCCCcchhhhc
Q psy13211         60 QESCSSLK--ALRKLRGPKPKPDSTRSLRKK   88 (89)
Q Consensus        60 ek~~~c~~--~~~~~~~~~~~~~~~~~~~~~   88 (89)
                      |+||.|..  |++.|+...+|.+|.++|+++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999976  999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=8.3e-08  Score=35.11  Aligned_cols=24  Identities=17%  Similarity=0.261  Sum_probs=19.9

Q ss_pred             CccchhhcccHHHHHHHHHHhcCC
Q psy13211          9 STDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      |.+||++|..++.|+.|+.+|+|+
T Consensus         5 c~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             HHHHhHHHHHHHHHHHHhhcccCC
Confidence            788888888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=7.1e-08  Score=37.02  Aligned_cols=28  Identities=18%  Similarity=0.264  Sum_probs=26.4

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCCCc
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRKPF   35 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~p~   35 (89)
                      .|..||+.|.....|..|..+|++++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4899999999999999999999999998

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.3e-07  Score=34.78  Aligned_cols=29  Identities=34%  Similarity=0.622  Sum_probs=24.9

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ++||+|+.|.......+.|.-|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999998888889999999888874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=9.2e-08  Score=36.67  Aligned_cols=25  Identities=28%  Similarity=0.275  Sum_probs=21.9

Q ss_pred             CCCcc--chhhcccHHHHHHHHHHhcC
Q psy13211          7 TKSTD--IQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         7 ~~~~~--c~~~f~~~~~l~~h~~~h~~   31 (89)
                      +.|.+  |+++|...++|..|+++|+|
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             eECCCCCCCcEECchhHhhhhcCccCC
Confidence            34666  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.1e-08  Score=39.02  Aligned_cols=26  Identities=4%  Similarity=-0.113  Sum_probs=23.6

Q ss_pred             CCCCchH--HHhhhcCCCCCCCCcchhh
Q psy13211         61 ESCSSLK--ALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        61 k~~~c~~--~~~~~~~~~~~~~~~~~~~   86 (89)
                      +||.|..  |++.|+...+|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999966  9999999999999999885

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.8e-07  Score=32.67  Aligned_cols=26  Identities=35%  Similarity=0.692  Sum_probs=23.2

Q ss_pred             CcccccchhhhcChhhHHHHHhHhcC
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRRTHG   59 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~h~~   59 (89)
                      |..|..|++.|+....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999998875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=8.3e-07  Score=33.23  Aligned_cols=29  Identities=31%  Similarity=0.619  Sum_probs=24.0

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ++||.|.+|...|.....+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888888888888888888888888764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=9.9e-07  Score=32.18  Aligned_cols=26  Identities=23%  Similarity=0.383  Sum_probs=23.9

Q ss_pred             cccccchhhhcChhhHHHHHhHhcCC
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      ..|.+||+.|...+.|.+|+-+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56999999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=7.1e-09  Score=38.46  Aligned_cols=27  Identities=11%  Similarity=0.043  Sum_probs=22.4

Q ss_pred             CCCCCchHHHhhhcCCCCCCCCcchhh
Q psy13211         60 QESCSSLKALRKLRGPKPKPDSTRSLR   86 (89)
Q Consensus        60 ek~~~c~~~~~~~~~~~~~~~~~~~~~   86 (89)
                      |+||.|..|++.|.......+|..+|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999998877767766664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.2e-06  Score=34.57  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=23.2

Q ss_pred             cCCCCcccccchhhhcChhhHHHHHh
Q psy13211         30 TGRKPFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        30 ~~~~p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      +|-+||.|..|++.|.+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999998854

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=3.4e-06  Score=31.02  Aligned_cols=27  Identities=19%  Similarity=0.235  Sum_probs=16.9

Q ss_pred             cccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      |.|..|+.....++.|.+|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            456666666666666666666666653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=9.8e-06  Score=29.05  Aligned_cols=26  Identities=27%  Similarity=0.455  Sum_probs=19.7

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      .|+.|.+.|.++..|+.|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777888888877888877777764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=7.8e-06  Score=30.00  Aligned_cols=26  Identities=27%  Similarity=0.216  Sum_probs=22.6

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +.|+.|..+|.....|..|+-+|+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            46899999999999999999988875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.69  E-value=8.9e-06  Score=32.41  Aligned_cols=27  Identities=7%  Similarity=0.073  Sum_probs=17.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      +.|..|++.|.+...|..|++.|..++
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             cCCCCCCCccCCcccccchHhhhcchH
Confidence            457777777777777777776665443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=2.8e-05  Score=27.82  Aligned_cols=26  Identities=23%  Similarity=0.450  Sum_probs=24.0

Q ss_pred             ccccchhhhcChhhHHHHHhHhcCCC
Q psy13211         36 KCVVCKQFFATYSGAYQHLRRTHGQE   61 (89)
Q Consensus        36 ~c~~c~~~f~~~~~l~~h~~~h~~ek   61 (89)
                      +|+.|.+.|.+...|.-|.+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68899999999999999999999985

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=6.1e-05  Score=27.56  Aligned_cols=28  Identities=21%  Similarity=0.379  Sum_probs=24.5

Q ss_pred             CCCCccchhhcccHHHHHHHHHHhcCCC
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRKHTGRK   33 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~h~~~~   33 (89)
                      ++-|.+|+..-...+.|+.|.++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            4668999998888999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=1.7e-05  Score=27.98  Aligned_cols=22  Identities=18%  Similarity=0.181  Sum_probs=11.2

Q ss_pred             CCccchhhcccHHHHHHHHHHh
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      +|-.|.++|..++.|..|+++|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            4455555555555555555443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.48  E-value=2.5e-05  Score=27.53  Aligned_cols=24  Identities=29%  Similarity=0.599  Sum_probs=21.5

Q ss_pred             cccccchhhhcChhhHHHHHhHhc
Q psy13211         35 FKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        35 ~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      |.|..|.+.|...+.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999998874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=5.1e-05  Score=27.41  Aligned_cols=26  Identities=38%  Similarity=0.621  Sum_probs=16.7

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhc
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      +|++|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56666666666666666666666653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.25  E-value=7.8e-05  Score=29.59  Aligned_cols=30  Identities=17%  Similarity=0.448  Sum_probs=26.4

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhcCCCC
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTHGQES   62 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~~ek~   62 (89)
                      +.|.|..|++.|.+...|-.|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            568999999999999999999999877653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00025  Score=25.87  Aligned_cols=29  Identities=24%  Similarity=0.524  Sum_probs=26.1

Q ss_pred             CCCcccccchhhhcChhhHHHHHhHhcCC
Q psy13211         32 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        32 ~~p~~c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +..|.|.+|...|.....|.-|+..|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45788999999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00016  Score=26.80  Aligned_cols=26  Identities=27%  Similarity=0.714  Sum_probs=18.3

Q ss_pred             CCccccc--chhhhcChhhHHHHHhHhc
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~~~h~   58 (89)
                      +||.|.+  |++.+..++.|.+|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677765  7777777887877776543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00021  Score=27.56  Aligned_cols=25  Identities=20%  Similarity=0.220  Sum_probs=16.7

Q ss_pred             CCccchhhcccHHHHHHHHHHhcCC
Q psy13211          8 KSTDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      .|+--++.|.....|..|+++|+||
T Consensus         9 ~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           9 GCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCCcchhHHHHHHHHhhcCCC
Confidence            3444455677777777777777765

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=9.9e-05  Score=27.65  Aligned_cols=27  Identities=30%  Similarity=0.607  Sum_probs=20.3

Q ss_pred             CCccccc--chhhhcChhhHHHHH-hHhcC
Q psy13211         33 KPFKCVV--CKQFFATYSGAYQHL-RRTHG   59 (89)
Q Consensus        33 ~p~~c~~--c~~~f~~~~~l~~h~-~~h~~   59 (89)
                      +||.|..  |.+.|...+...+|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5777765  888888888888886 66654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.85  E-value=0.00024  Score=26.58  Aligned_cols=22  Identities=23%  Similarity=0.624  Sum_probs=18.1

Q ss_pred             CcccccchhhhcChhhHHHHHh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      ||.|.+|++.|....-+.+|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            6788888888888888888865

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.84  E-value=0.00033  Score=25.61  Aligned_cols=28  Identities=29%  Similarity=0.570  Sum_probs=19.7

Q ss_pred             CCcccc--cchhhhcChhhHHHHHhHhcCC
Q psy13211         33 KPFKCV--VCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        33 ~p~~c~--~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      +||.|.  .|.+.|...-.|.+|.-.|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            466664  3777787777787777777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.00037  Score=25.34  Aligned_cols=25  Identities=24%  Similarity=0.470  Sum_probs=18.4

Q ss_pred             CCcccc--cchhhhcChhhHHHHHhHh
Q psy13211         33 KPFKCV--VCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        33 ~p~~c~--~c~~~f~~~~~l~~h~~~h   57 (89)
                      .||.|.  .|++.|..++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467775  3778888888888877765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00017  Score=26.22  Aligned_cols=26  Identities=23%  Similarity=0.157  Sum_probs=22.7

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      ++|..|......++.|..|.+.|+|.
T Consensus         4 fkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           4 FKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             ceeeecccccCCchheEEeeecccCc
Confidence            57889998888999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00041  Score=25.72  Aligned_cols=26  Identities=23%  Similarity=0.281  Sum_probs=23.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcCC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +.|.+|+..|..+.-+.-|.++|.|.
T Consensus         4 ~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           4 YSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             SEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             cccchHHHHhhccccceEeeecccCc
Confidence            46999999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00037  Score=25.42  Aligned_cols=23  Identities=26%  Similarity=0.697  Sum_probs=19.3

Q ss_pred             CcccccchhhhcChhhHHHHHhH
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLRR   56 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~~   56 (89)
                      ||.|..|.-.|....+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67888888888888999888774

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0014  Score=23.93  Aligned_cols=25  Identities=24%  Similarity=0.456  Sum_probs=17.3

Q ss_pred             CCcccccchhhhcChhhHHHHHhHh
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      +||.|+.|.......++|..|.++.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            4677777777777777777776643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.41  E-value=0.00057  Score=23.91  Aligned_cols=21  Identities=10%  Similarity=0.169  Sum_probs=17.3

Q ss_pred             CCCccchhhcccHHHHHHHHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYR   27 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~   27 (89)
                      ++|+.|.+.|.++..|+.|+-
T Consensus         3 ykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHH
Confidence            578889888988888888864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0013  Score=25.88  Aligned_cols=28  Identities=29%  Similarity=0.462  Sum_probs=23.2

Q ss_pred             CCCCccc--ccchhhhcChhhHHHHHhHhc
Q psy13211         31 GRKPFKC--VVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        31 ~~~p~~c--~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      .++||.|  ..|+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4789999  458999999999998877665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.00098  Score=24.00  Aligned_cols=24  Identities=21%  Similarity=0.192  Sum_probs=19.3

Q ss_pred             CCCccchhhcccHHHHHHHHHHhc
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~   30 (89)
                      .+|++|..+-+++..|..|.++|-
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            468888888888888888887763

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.93  E-value=0.0018  Score=22.65  Aligned_cols=22  Identities=9%  Similarity=-0.069  Sum_probs=17.5

Q ss_pred             CCCccchhhcccHHHHHHHHHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK   28 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~   28 (89)
                      ++|..|-+.|..+.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5788888888888888888664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0023  Score=24.55  Aligned_cols=24  Identities=25%  Similarity=0.325  Sum_probs=19.1

Q ss_pred             cccchhhhcChhhHHHHHhHhcCC
Q psy13211         37 CVVCKQFFATYSGAYQHLRRTHGQ   60 (89)
Q Consensus        37 c~~c~~~f~~~~~l~~h~~~h~~e   60 (89)
                      |.--++.|.....|..|+++|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            334456788889999999999987

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.003  Score=23.00  Aligned_cols=23  Identities=30%  Similarity=0.580  Sum_probs=13.2

Q ss_pred             CCcccccchhhhcChhhHHHHHh
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      +||+|..|.-.-...++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            35666666555555566666554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.59  E-value=0.0052  Score=21.87  Aligned_cols=19  Identities=16%  Similarity=0.137  Sum_probs=10.9

Q ss_pred             CCccchhhcccHHHHHHHH
Q psy13211          8 KSTDIQVRMFRIHIIRNHY   26 (89)
Q Consensus         8 ~~~~c~~~f~~~~~l~~h~   26 (89)
                      .|..||+.+..+.+|..|.
T Consensus         3 ~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           3 ECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             BCTTTCCBCSSHHHHHHHH
T ss_pred             ccccchhhhhhHhHHHHHH
Confidence            4555666666666655554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0068  Score=24.96  Aligned_cols=25  Identities=16%  Similarity=0.100  Sum_probs=19.7

Q ss_pred             CCCCCccchhhcccHHHHHHHHHHh
Q psy13211          5 GKTKSTDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         5 ~~~~~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      |-++|-.|++.|.....|.+|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3467888888888888888887765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.29  E-value=0.017  Score=21.69  Aligned_cols=22  Identities=27%  Similarity=0.451  Sum_probs=18.1

Q ss_pred             CcccccchhhhcChhhHHHHHh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      .|.|..||-.|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788999999999998888753

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.92  E-value=0.046  Score=19.24  Aligned_cols=20  Identities=15%  Similarity=0.150  Sum_probs=16.2

Q ss_pred             cchhhcccHHHHHHHHHHhc
Q psy13211         11 DIQVRMFRIHIIRNHYRKHT   30 (89)
Q Consensus        11 ~c~~~f~~~~~l~~h~~~h~   30 (89)
                      -|+++|..-..|+.|+.+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            47888988888888888775

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.05  E-value=0.093  Score=19.74  Aligned_cols=25  Identities=12%  Similarity=0.121  Sum_probs=18.4

Q ss_pred             CCCccchhhcccHHHHHHHHHHhcC
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKHTG   31 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h~~   31 (89)
                      +-|+.|++.|.....+..|-..-.|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            3488999999988887777654443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.61  E-value=0.077  Score=18.77  Aligned_cols=23  Identities=22%  Similarity=0.180  Sum_probs=14.0

Q ss_pred             CCCCccchhhcccHHHHHHHHHH
Q psy13211          6 KTKSTDIQVRMFRIHIIRNHYRK   28 (89)
Q Consensus         6 ~~~~~~c~~~f~~~~~l~~h~~~   28 (89)
                      ++.|+.|+-....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            44566666666666666666543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.60  E-value=0.17  Score=20.54  Aligned_cols=27  Identities=19%  Similarity=0.433  Sum_probs=20.8

Q ss_pred             CCCCcccccchhhhcChhhHHHHHhHh
Q psy13211         31 GRKPFKCVVCKQFFATYSGAYQHLRRT   57 (89)
Q Consensus        31 ~~~p~~c~~c~~~f~~~~~l~~h~~~h   57 (89)
                      .+.|..|.+|+......-+|.+|+...
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            456888888988888888888776543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.68  E-value=0.05  Score=24.17  Aligned_cols=22  Identities=23%  Similarity=0.712  Sum_probs=18.5

Q ss_pred             CcccccchhhhcChhhHHHHHh
Q psy13211         34 PFKCVVCKQFFATYSGAYQHLR   55 (89)
Q Consensus        34 p~~c~~c~~~f~~~~~l~~h~~   55 (89)
                      -|-|..|.+.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3678999999999999988865

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.67  E-value=0.19  Score=18.28  Aligned_cols=22  Identities=27%  Similarity=0.370  Sum_probs=14.2

Q ss_pred             cchhhcccHHHHHHHHHHhcCC
Q psy13211         11 DIQVRMFRIHIIRNHYRKHTGR   32 (89)
Q Consensus        11 ~c~~~f~~~~~l~~h~~~h~~~   32 (89)
                      +|+-.|.....|..|.-.|+|+
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            4555666666677777767664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.22  E-value=0.22  Score=17.66  Aligned_cols=21  Identities=14%  Similarity=0.169  Sum_probs=12.2

Q ss_pred             CccchhhcccHHHHHHHHHHh
Q psy13211          9 STDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         9 ~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      ..-|.+.|...+.+..|+-+|
T Consensus         6 hkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           6 HKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             STTCCCEESSHHHHHHHHGGG
T ss_pred             cccHHHHhhchHHHHHHhhcc
Confidence            345666666666666665443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.13  E-value=0.24  Score=18.64  Aligned_cols=23  Identities=13%  Similarity=0.049  Sum_probs=18.9

Q ss_pred             CCCccchhhcccHHHHHHHHHHh
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRKH   29 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~h   29 (89)
                      +.|.+|.+++..++++..|..+.
T Consensus         9 yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHHHhh
Confidence            56899999999999998886543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.86  E-value=0.16  Score=22.20  Aligned_cols=26  Identities=15%  Similarity=0.400  Sum_probs=17.4

Q ss_pred             CCcccccchhhhcChhhHHHHHhHhc
Q psy13211         33 KPFKCVVCKQFFATYSGAYQHLRRTH   58 (89)
Q Consensus        33 ~p~~c~~c~~~f~~~~~l~~h~~~h~   58 (89)
                      ..|+|..|...|.....|..|+-.|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34677777777777777777765554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.23  E-value=0.6  Score=16.60  Aligned_cols=22  Identities=5%  Similarity=-0.008  Sum_probs=14.6

Q ss_pred             CCCccchhhcccHHHHHHHHHH
Q psy13211          7 TKSTDIQVRMFRIHIIRNHYRK   28 (89)
Q Consensus         7 ~~~~~c~~~f~~~~~l~~h~~~   28 (89)
                      +.|..|++...+...++-|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5677777777776666666544