Psyllid ID: psy13388

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MDPSYHSTSSGNTPSSSGPPMSEADHKSAAAGGRLGPGYSIADPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEcccccEEEEEEEccEEEEEEEEEccccEEEcccccccccHHHHHHHHHHccccHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccEEcccccccccccEEccccEEEccccccccccccccccccccccccccccccHHcccccccccccccccEEEcccHHHHHHHHccccccEEEEEEcccccEEEEEEEccEEEEEEEEEEccEEEcccccccEccHHHHHHHHHHccHHHcccccEEc
Coil and Loop (DISEMBL)
mdpsyhstssgntpsssgppmseadhksaaaggrlgpgysiadpgvasrglslaeQDFLTMNCALavtgggsdsastsggpdtscppmpslsalnrterdlphhdekTWLVRMSRAQAEALlsgrpdgtflirpsttgqyALSIvcsgapkhclvyetergfgfaepfniypSLGALVLHYAANSleehnddlifl
Flexible Loop (DISEMBL)
mdpsyhstssgntpsssgppMSEADHKSAAAGGRLGPGYSIADPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Low Complexity Region (SEG)
MDPSYHstssgntpsssgppmsEADHKSAAAGGRLGPGYSIADPGVASRGLSLAEQDFLTMNCALAVtgggsdsastsggpdtsCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Disordered region (IsUnstruct)
*************************************************GLSLAEQDFLTMNCALAVT****************************************WLVRM******ALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSL**********
Disordered Region (DISOPRED)
****************************************************LAEQDFLTMN***************************************PHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Disordered Region (DISEMBL)
*****************************AAGGRLGPGYSIADPGVASRGLSLAEQDFLTMNCALAVT*****************PPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Disordered Region (DISPRO)
**********************************LGPGYSIADPGVASRGLSLAEQDFLTMNCALAV*********************************L***DEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDPSYHSTSSGNTPSSSGPPMSEADHKSAAAGGRLGPGYSIADPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q92569	461	Phosphatidylinositol 3-ki	yes	N/A	0.510	0.216	0.568	9e-29
Q64143	461	Phosphatidylinositol 3-ki	yes	N/A	0.510	0.216	0.568	1e-28
O46404	461	Phosphatidylinositol 3-ki	yes	N/A	0.510	0.216	0.568	2e-28
O00459	728	Phosphatidylinositol 3-ki	no	N/A	0.515	0.138	0.582	2e-27
P23726	724	Phosphatidylinositol 3-ki	no	N/A	0.515	0.139	0.572	6e-27
O08908	722	Phosphatidylinositol 3-ki	no	N/A	0.515	0.139	0.563	5e-26
Q63789	461	Phosphatidylinositol 3-ki	no	N/A	0.510	0.216	0.549	1e-25
Q5R685	724	Phosphatidylinositol 3-ki	no	N/A	0.515	0.139	0.553	2e-25
P26450	724	Phosphatidylinositol 3-ki	no	N/A	0.515	0.139	0.553	2e-25
P27986	724	Phosphatidylinositol 3-ki	no	N/A	0.515	0.139	0.553	2e-25

>sp|Q92569|P55G_HUMAN Phosphatidylinositol 3-kinase regulatory subunit gamma OS=Homo sapiens GN=PIK3R3 PE=1 SV=2

 Score =  126 bits (317), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 2/102 (1%)

Query: 94  LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct: 343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query: 152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 403 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 444

Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1.
Homo sapiens (taxid: 9606)

>sp|Q64143|P55G_MOUSE Phosphatidylinositol 3-kinase regulatory subunit gamma OS=Mus musculus GN=Pik3r3 PE=1 SV=1

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 2/102 (1%)

Query: 94  LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct: 343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query: 152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 403 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 444

Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1.

Mus musculus (taxid: 10090)

>sp|O46404|P55G_BOVIN Phosphatidylinositol 3-kinase regulatory subunit gamma OS=Bos taurus GN=PIK3R3 PE=2 SV=1

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 2/102 (1%)

Query: 94  LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct: 343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query: 152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 403 HCVIYSTARGYGFAEPYNLYGSLKELVLHYQRTSLVQHNDSL 444

Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1.

Bos taurus (taxid: 9913)

>sp|O00459|P85B_HUMAN Phosphatidylinositol 3-kinase regulatory subunit beta OS=Homo sapiens GN=PIK3R2 PE=1 SV=2

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           AL   E DLPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+  G YA S+V  G  
Sbjct: 606 ALMEDEDDLPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDT 665

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++Y T  GFGFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 666 KHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDAL 708

Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane.

Homo sapiens (taxid: 9606)

>sp|P23726|P85B_BOVIN Phosphatidylinositol 3-kinase regulatory subunit beta OS=Bos taurus GN=PIK3R2 PE=1 SV=1

 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           +L   E DLPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+  G YA S+V  G  
Sbjct: 602 SLMEDEDDLPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDT 661

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++Y T  GFGFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 662 KHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDAL 704

Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane.

Bos taurus (taxid: 9913)

>sp|O08908|P85B_MOUSE Phosphatidylinositol 3-kinase regulatory subunit beta OS=Mus musculus GN=Pik3r2 PE=1 SV=2

 Score =  117 bits (293), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           +L   E  LPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+  G YA S+V  G  
Sbjct: 600 SLMEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDT 659

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++Y T  GFGFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 660 KHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDAL 702

Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane.

Mus musculus (taxid: 10090)

>sp|Q63789|P55G_RAT Phosphatidylinositol 3-kinase regulatory subunit gamma OS=Rattus norvegicus GN=Pik3r3 PE=2 SV=1

 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 2/102 (1%)

Query: 94  LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           +N  +  LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct: 343 INEDDESLPHYDEKTWFVEDVNRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query: 152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            C++Y   RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 403 PCVIYSPARGYGFAEPYNLYGSLKELVLHYQQTSLVQHNDSL 444

Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1.

Rattus norvegicus (taxid: 10116)

>sp|Q5R685|P85A_PONAB Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Pongo abelii GN=PIK3R1 PE=2 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           +L   + DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  
Sbjct: 608 SLVEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEV 667

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++ +T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 668 KHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 710

Binds to activated (phosphorylated) protein-Tyr kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Necessary for the insulin-stimulated increase in glucose uptake and glycogen synthesis in insulin-sensitive tissues. Plays an important role in signaling in response to FGFR1, FGFR2, FGFR3, FGFR4, KITLG/SCF, KIT, PDGFRA and PDGFRB. Likewise, plays a role in ITGB2 signaling.

Pongo abelii (taxid: 9601)

>sp|P26450|P85A_MOUSE Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Mus musculus GN=Pik3r1 PE=1 SV=2

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           +L   + DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  
Sbjct: 608 SLVEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEV 667

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++ +T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 668 KHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 710

Binds to activated (phosphorylated) protein-Tyr kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Necessary for the insulin-stimulated increase in glucose uptake and glycogen synthesis in insulin-sensitive tissues. Plays an important role in signaling in response to FGFR1, FGFR2, FGFR3, FGFR4, KITLG/SCF, KIT, PDGFRA and PDGFRB. Likewise, plays a role in ITGB2 signaling.

Mus musculus (taxid: 10090)

>sp|P27986|P85A_HUMAN Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Homo sapiens GN=PIK3R1 PE=1 SV=2

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%)

Query: 93  ALNRTERDLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 150
           +L   + DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  
Sbjct: 608 SLVEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEV 667

Query: 151 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           KHC++ +T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 668 KHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 710

Binds to activated (phosphorylated) protein-Tyr kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Necessary for the insulin-stimulated increase in glucose uptake and glycogen synthesis in insulin-sensitive tissues. Plays an important role in signaling in response to FGFR1, FGFR2, FGFR3, FGFR4, KITLG/SCF, KIT, PDGFRA and PDGFRB. Likewise, plays a role in ITGB2 signaling.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
242021327	726	Phosphatidylinositol 3-kinase regulatory	0.484	0.130	0.645	1e-32
312377934	1156	hypothetical protein AND_10630 [Anophele	0.505	0.085	0.61	2e-30
322795970	774	hypothetical protein SINV_14862 [Solenop	0.505	0.127	0.653	2e-30
66500538	1256	PREDICTED: hypothetical protein LOC40857	0.464	0.072	0.673	9e-30
307172412	1185	Phosphatidylinositol 3-kinase regulatory	0.464	0.076	0.663	3e-29
307211841	723	Phosphatidylinositol 3-kinase regulatory	0.464	0.125	0.652	4e-29
340709184	1263	PREDICTED: hypothetical protein LOC10064	0.489	0.076	0.653	5e-29
350425237	1255	PREDICTED: hypothetical protein LOC10074	0.489	0.076	0.653	5e-29
332018851	945	Phosphatidylinositol 3-kinase regulatory	0.505	0.104	0.623	6e-29
328710005	441	PREDICTED: phosphatidylinositol 3-kinase	0.484	0.215	0.635	8e-29

>gi|242021327|ref|XP_002431096.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis] gi|212516345|gb|EEB18358.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis]

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 1/96 (1%)

Query: 99  RDLPHHDEKTW-LVRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYE 157
           + +PH +E  W L   SRAQA  LL  +P+GTFL+RPS++GQYALSIVC+G   HC++Y+
Sbjct: 601 KSMPHQNEYLWNLPECSRAQAATLLESKPEGTFLVRPSSSGQYALSIVCNGVINHCIIYQ 660

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           T+RGFGFAEP+NIYPSL  LVLHYA NSLEEHN++L
Sbjct: 661 TDRGFGFAEPYNIYPSLKQLVLHYANNSLEEHNEEL 696

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312377934|gb|EFR24642.1| hypothetical protein AND_10630 [Anopheles darlingi]

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 79/100 (79%), Gaps = 1/100 (1%)

Query: 95   NRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHC 153
            N++  ++PH DE TWL+   SR +AE  L+ +P GTFLIRP + G YALSI C+GA  HC
Sbjct: 996  NQSGEEMPHLDETTWLLEGCSRQEAEEKLAKKPTGTFLIRPRSAGHYALSIACNGATNHC 1055

Query: 154  LVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            ++YET+RG+GFAEP+ IY SL ALV+HYA+NSLEEHND+L
Sbjct: 1056 IIYETDRGYGFAEPYFIYESLKALVVHYASNSLEEHNDNL 1095

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795970|gb|EFZ18596.1| hypothetical protein SINV_14862 [Solenopsis invicta]

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/101 (65%), Positives = 79/101 (78%), Gaps = 2/101 (1%)

Query: 95  NRTERDLP-HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKH 152
           N+ E D   H DEKTWL ++ SR  A+ +L GRPDGTFL+R S TGQYALSIVC+G  +H
Sbjct: 648 NKEEMDFAVHSDEKTWLYLQCSRPDADHILKGRPDGTFLVRRSRTGQYALSIVCNGTVQH 707

Query: 153 CLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           C++Y TERGFGFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 708 CIIYATERGFGFAEPYNIHESLRHLVLHYAHNSLEEHNECL 748

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66500538|ref|XP_392119.2| PREDICTED: hypothetical protein LOC408577 [Apis mellifera]

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 1/92 (1%)

Query: 103  HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERG 161
            H DEKTWL +  SR+ A+ +L+ RPDGTFLIR S TGQYALSI+C+G   HC++Y TERG
Sbjct: 1122 HSDEKTWLYLECSRSDADRILADRPDGTFLIRTSRTGQYALSIMCNGTVNHCIIYGTERG 1181

Query: 162  FGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            FGFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 1182 FGFAEPYNIHKSLKHLVLHYAQNSLEEHNESL 1213

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172412|gb|EFN63874.1| Phosphatidylinositol 3-kinase regulatory subunit alpha [Camponotus floridanus]

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 103  HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERG 161
            H DEKTWL ++ SR  A+ +L G+PDGTFL+R S TGQYALSIVC+G  +HC++Y TERG
Sbjct: 1046 HSDEKTWLYLQGSRPDADRILKGKPDGTFLVRRSRTGQYALSIVCNGVVQHCIIYGTERG 1105

Query: 162  FGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            +GFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 1106 YGFAEPYNIHQSLKHLVLHYAQNSLEEHNECL 1137

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211841|gb|EFN87788.1| Phosphatidylinositol 3-kinase regulatory subunit alpha [Harpegnathos saltator]

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 60/92 (65%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 103 HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERG 161
           H D+K+WL ++ SR+ A+  L GRPDGTFL+R S TGQYALSIVC+G  +HC++Y TERG
Sbjct: 581 HSDDKSWLFLKGSRSDADRFLMGRPDGTFLVRRSRTGQYALSIVCNGTVQHCIIYATERG 640

Query: 162 FGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           +GFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 641 YGFAEPYNIHESLKHLVLHYAQNSLEEHNECL 672

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709184|ref|XP_003393192.1| PREDICTED: hypothetical protein LOC100643962 [Bombus terrestris]

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 2/98 (2%)

Query: 98   ERDLP-HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLV 155
            E DL  H DE TWL +  SR+ A+ +L+ RPDGTFLIR S TGQYALSI+C+G   HC++
Sbjct: 1116 EVDLEVHSDETTWLYLECSRSDADRILAERPDGTFLIRTSRTGQYALSIMCNGTVNHCII 1175

Query: 156  YETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            Y TERGFGFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 1176 YGTERGFGFAEPYNIHKSLKHLVLHYAQNSLEEHNESL 1213

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425237|ref|XP_003494056.1| PREDICTED: hypothetical protein LOC100743083 [Bombus impatiens]

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 2/98 (2%)

Query: 98   ERDLP-HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLV 155
            E DL  H DE TWL +  SR+ A+ +L+ RPDGTFLIR S TGQYALSI+C+G   HC++
Sbjct: 1108 EVDLEVHSDETTWLYLECSRSDADRILAERPDGTFLIRTSRTGQYALSIMCNGTVNHCII 1167

Query: 156  YETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            Y TERGFGFAEP+NI+ SL  LVLHYA NSLEEHN+ L
Sbjct: 1168 YGTERGFGFAEPYNIHKSLKHLVLHYAQNSLEEHNESL 1205

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018851|gb|EGI59407.1| Phosphatidylinositol 3-kinase regulatory subunit alpha [Acromyrmex echinatior]

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 63/101 (62%), Positives = 79/101 (78%), Gaps = 2/101 (1%)

Query: 95  NRTERDLP-HHDEKTWL-VRMSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKH 152
           N+ E D   H DEKTWL ++ SR+ A+ +L GRPDGTFL+R S TGQYALSIVC+   +H
Sbjct: 796 NKEEVDFAVHSDEKTWLFLKGSRSDADLILKGRPDGTFLVRRSRTGQYALSIVCNDTVQH 855

Query: 153 CLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           C++Y TERG+GFAEP+NI+ +L  LVLHYA NSLEEHN+ L
Sbjct: 856 CIIYATERGYGFAEPYNIHETLKHLVLHYAQNSLEEHNECL 896

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710005|ref|XP_001949153.2| PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta-like [Acyrthosiphon pisum]

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 75/96 (78%), Gaps = 1/96 (1%)

Query: 99  RDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYE 157
           ++L H DE TWL++  SRA AE +L+G+ +GTFLIRPS TGQ ALSIVC+G   HC+VY 
Sbjct: 331 QNLSHLDESTWLLQSCSRADAERMLNGKRNGTFLIRPSRTGQSALSIVCNGVVNHCIVYR 390

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           T +GFGFAEP+NIY SL  LV+HY+  SLEEHND L
Sbjct: 391 TPKGFGFAEPYNIYSSLKDLVMHYSQTSLEEHNDSL 426

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
UNIPROTKB|E7EMU8	366	PIK3R3 "Phosphatidylinositol 3	0.510	0.273	0.568	1.7e-27
UNIPROTKB|F1S3V4	430	PIK3R3 "Uncharacterized protei	0.510	0.232	0.568	2.2e-27
UNIPROTKB|E2RPB0	461	PIK3R3 "Uncharacterized protei	0.510	0.216	0.568	2.2e-27
UNIPROTKB|Q92569	461	PIK3R3 "Phosphatidylinositol 3	0.510	0.216	0.568	2.2e-27
UNIPROTKB|D4A6X0	402	Pik3r3 "Phosphatidylinositol 3	0.510	0.248	0.568	2.8e-27
UNIPROTKB|F1MDQ5	461	PIK3R3 "Phosphatidylinositol 3	0.510	0.216	0.568	2.9e-27
UNIPROTKB|O46404	461	PIK3R3 "Phosphatidylinositol 3	0.510	0.216	0.568	2.9e-27
UNIPROTKB|F6TDL0	507	PIK3R3 "Phosphatidylinositol 3	0.510	0.197	0.568	4.5e-27
UNIPROTKB|E1C5L1	728	PIK3R3 "Uncharacterized protei	0.510	0.137	0.578	7.5e-27
UNIPROTKB|E1C8M6	730	PIK3R3 "Uncharacterized protei	0.510	0.136	0.578	7.5e-27

UNIPROTKB|E7EMU8 PIK3R3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   248 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 307

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   308 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 349

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

UNIPROTKB|F1S3V4 PIK3R3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   312 VNEEDENLPHYDEKTWFVEDVNRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 371

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   372 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 413

GO:0046935 "1-phosphatidylinositol-3-kinase regulator activity" evidence=IEA

GO:0008286 "insulin receptor signaling pathway" evidence=IEA

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

UNIPROTKB|E2RPB0 PIK3R3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   403 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 444

GO:0046935 "1-phosphatidylinositol-3-kinase regulator activity" evidence=IEA

GO:0008286 "insulin receptor signaling pathway" evidence=IEA

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

UNIPROTKB|Q92569 PIK3R3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   403 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 444

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0008286 "insulin receptor signaling pathway" evidence=IEA

GO:0046935 "1-phosphatidylinositol-3-kinase regulator activity" evidence=IEA

GO:0016303 "1-phosphatidylinositol-3-kinase activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0031295 "T cell costimulation" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0036092 "phosphatidylinositol-3-phosphate biosynthetic process" evidence=TAS

UNIPROTKB|D4A6X0 Pik3r3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Rattus norvegicus (taxid:10116)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 58/102 (56%), Positives = 72/102 (70%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  +  LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   284 INEDDESLPHYDEKTWFVEDVNRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 343

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   344 HCVIYSTARGYGFAEPYNLYGSLKELVLHYQQTSLVQHNDSL 385

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

UNIPROTKB|F1MDQ5 PIK3R3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 2.9e-27, P = 2.9e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   403 HCVIYSTARGYGFAEPYNLYGSLKELVLHYQRTSLVQHNDSL 444

GO:0046935 "1-phosphatidylinositol-3-kinase regulator activity" evidence=IEA

GO:0008286 "insulin receptor signaling pathway" evidence=IEA

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

UNIPROTKB|O46404 PIK3R3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 2.9e-27, P = 2.9e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   343 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 402

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   403 HCVIYSTARGYGFAEPYNLYGSLKELVLHYQRTSLVQHNDSL 444

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

UNIPROTKB|F6TDL0 PIK3R3 "Phosphatidylinositol 3-kinase regulatory subunit gamma" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 58/102 (56%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  + +LPH+DEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   389 INEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVK 448

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct:   449 HCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSL 490

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

UNIPROTKB|E1C5L1 PIK3R3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 311 (114.5 bits), Expect = 7.5e-27, P = 7.5e-27
 Identities = 59/102 (57%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  E +LPHHDEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   609 VNEEEENLPHHDEKTWFVGDLNRIQAEDLLCGKPDGAFLIRESSKKGCYACSVVADGEVK 668

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y +L  LVLHY   SL +HND L
Sbjct:   669 HCVIYSTPRGYGFAEPYNLYSTLKDLVLHYQQTSLVQHNDSL 710

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

UNIPROTKB|E1C8M6 PIK3R3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 311 (114.5 bits), Expect = 7.5e-27, P = 7.5e-27
 Identities = 59/102 (57%), Positives = 73/102 (71%)

Query:    94 LNRTERDLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
             +N  E +LPHHDEKTW V  ++R QAE LL G+PDG FLIR S+  G YA S+V  G  K
Sbjct:   615 VNEEEENLPHHDEKTWFVGDLNRIQAEDLLCGKPDGAFLIRESSKKGCYACSVVADGEVK 674

Query:   152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             HC++Y T RG+GFAEP+N+Y +L  LVLHY   SL +HND L
Sbjct:   675 HCVIYSTPRGYGFAEPYNLYSTLKDLVLHYQQTSLVQHNDSL 716

GO:0005942 "phosphatidylinositol 3-kinase complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q64143	P55G_MOUSE	No assigned EC number	0.5686	0.5102	0.2169	yes	N/A
Q92569	P55G_HUMAN	No assigned EC number	0.5686	0.5102	0.2169	yes	N/A
O46404	P55G_BOVIN	No assigned EC number	0.5686	0.5102	0.2169	yes	N/A
Q63788	P85B_RAT	No assigned EC number	0.5533	0.5153	0.1398	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	196
cd09930	104	cd09930, SH2_cSH2_p85_like, C-terminal Src homolog	1e-50
smart00252	84	smart00252, SH2, Src homology 2 domains	2e-19
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	1e-18
pfam00017	77	pfam00017, SH2, SH2 domain	7e-17
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	1e-15
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	2e-11
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	6e-10
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	9e-10
cd09923	81	cd09923, SH2_SOCS_family, Src homology 2 (SH2) dom	3e-09
cd09925	104	cd09925, SH2_SHC, Src homology 2 (SH2) domain foun	2e-08
cd10355	92	cd10355, SH2_DAPP1_BAM32_like, Src homology 2 doma	2e-08
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	8e-08
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	1e-07
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	3e-07
cd10405	103	cd10405, SH2_Vav1, Src homology 2 (SH2) domain fou	6e-07
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	6e-07
cd10407	103	cd10407, SH2_Vav3, Src homology 2 (SH2) domain fou	2e-06
cd10344	104	cd10344, SH2_SLAP, Src homology 2 domain found in	3e-06
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	5e-06
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	7e-06
cd10386	81	cd10386, SH2_SOCS5, Src homology 2 (SH2) domain fo	1e-05
cd10406	103	cd10406, SH2_Vav2, Src homology 2 (SH2) domain fou	1e-05
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	2e-05
cd10357	87	cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domai	2e-05
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	3e-05
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	6e-05
cd09927	116	cd09927, SH2_Tensin_like, Src homology 2 domain fo	6e-05
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	8e-05
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	1e-04
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	4e-04
cd10399	106	cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain	4e-04
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	4e-04
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	5e-04
cd10366	101	cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain	5e-04
cd10391	98	cd10391, SH2_SHE, Src homology 2 domain found in S	5e-04
cd10367	101	cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain	0.001
cd10360	79	cd10360, SH2_Srm, Src homology 2 (SH2) domain foun	0.001
cd10387	100	cd10387, SH2_SOCS6, Src homology 2 (SH2) domain fo	0.001
cd10356	113	cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domai	0.002
cd09918	85	cd09918, SH2_Nterm_SPT6_like, N-terminal Src homol	0.002
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	0.002
cd09926	106	cd09926, SH2_CRK_like, Src homology 2 domain found	0.002
cd10385	101	cd10385, SH2_SOCS4, Src homology 2 (SH2) domain fo	0.002
cd10368	101	cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain	0.003
cd10419	101	cd10419, SH2_Src_Fyn_isoform_b_like, Src homology	0.003

>gnl|CDD|198184 cd09930, SH2_cSH2_p85_like, C-terminal Src homology 2 (cSH2) domain found in p85

 Score =  158 bits (401), Expect = 1e-50
 Identities = 63/94 (67%), Positives = 77/94 (81%), Gaps = 2/94 (2%)

Query: 102 PHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETE 159
           PHHDE+TWLV  ++R QAE LL G+PDGTFLIR S+T G YA S+VC+G  KHC++Y+TE
Sbjct: 1   PHHDERTWLVGDINRTQAEELLRGKPDGTFLIRESSTQGCYACSVVCNGEVKHCVIYKTE 60

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            G+GFAEP+N+Y SL  LVLHYA NSLE+HND L
Sbjct: 61  TGYGFAEPYNLYESLKELVLHYAHNSLEQHNDSL 94

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, a inter SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and 2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, 2) p85 iSH2 domain with C2 domain of p110alpha, and 3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 78.4 bits (194), Expect = 2e-19
 Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR +AE LL    DG FL+R S +  G Y LS+   G  KH  +   E G  + E   
Sbjct: 7   FISREEAEKLLKNEGDGDFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKFYLEGGR 66

Query: 170 IYPSLGALVLHYAANSL 186
            +PSL  LV HY  NSL
Sbjct: 67  KFPSLVELVEHYQKNSL 83

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 76.0 bits (187), Expect = 1e-18
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVC-SGAPKHCLVYETERGFGFA-EP 167
            +SR +AE LL G+PDGTFL+R S++  G Y LS+    G  KH L+   E G+      
Sbjct: 6   SISREEAERLLRGKPDGTFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGYYLLGGS 65

Query: 168 FNIYPSLGALVLHY 181
              +PSL  LV HY
Sbjct: 66  GRTFPSLPELVEHY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 71.5 bits (176), Expect = 7e-17
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 113 MSRAQAEALL-SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAEP 167
           +SR +AE LL + +PDGTFL+R S +  G Y LS+   G  KH  +   + G  +     
Sbjct: 6   ISREEAERLLLNPKPDGTFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGGYYISGGV 65

Query: 168 FNIYPSLGALVLHY 181
              + SL  LV HY
Sbjct: 66  T--FNSLPELVEHY 77

Length = 77

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score = 68.9 bits (169), Expect = 1e-15
 Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 106 EKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTTG--QYALSIVCSGAPKHCLVYETERGF 162
           E  W V  M R  AE  L  RPDGT+L+R    G  QYALSI  +G  KH  + +   G 
Sbjct: 4   EFLWFVGEMERDTAENRLENRPDGTYLVRVRPQGETQYALSIKYNGDVKHMKIEQRSDGL 63

Query: 163 GFAEPFNIYPSLGALVLHYAANSLEE 188
            +      + SL  LV +Y  NSL E
Sbjct: 64  YYLSESRHFKSLVELVNYYERNSLGE 89

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR +    +   PDGTFL+R ++T  G Y L++   G  K   ++  +  +GF++P  
Sbjct: 13  DISREEVNEKMRDTPDGTFLVRDASTMKGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLT 72

Query: 170 IYPSLGALVLHYAANSLEEHNDDL 193
            + S+  L+ +Y  NSL E+N  L
Sbjct: 73  -FNSVVELINYYRNNSLAEYNRKL 95

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 53.9 bits (130), Expect = 6e-10
 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 115 RAQAEALLS---GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYET----ERGFGFA 165
           R +AE LL       DGTFL+R S T  G Y LS   +G  +HC +       E+ +   
Sbjct: 15  RDEAEKLLLEYCEGGDGTFLVRESETFVGDYTLSFWRNGKVQHCRIRSRQENGEKKYYLT 74

Query: 166 EPFNIYPSLGALVLHYAANSL 186
           +   ++ SL  L+ +Y  N L
Sbjct: 75  DNL-VFDSLYELIDYYRQNPL 94

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 53.4 bits (129), Expect = 9e-10
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 104 HDEKTW-LVRMSRAQAEALLSGRP-DGTFLIRPSTTGQ--YALSIVCSGAPKHCLVYETE 159
           H+ K W    ++R QAE +L   P DG FL+RPS T    +A+S    G  KHC + +  
Sbjct: 1   HESKEWFHANLTREQAEEMLMRVPRDGAFLVRPSETDPNSFAISFRAEGKIKHCRIKQEG 60

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANSL 186
           R F      + + SL  LV +Y  + L
Sbjct: 61  RLFVIGT--SQFESLVELVSYYEKHPL 85

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198178 cd09923, SH2_SOCS_family, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQY--ALSIVCSGAPKHC-LVYETERGFGF-AEPF 168
           ++R +AE LL+G+P+GTFL+R S+  +Y  ++S    G   H  + Y   R F F +   
Sbjct: 7   ITRYEAEELLAGKPEGTFLVRDSSDSRYLFSVSFRTYGRTLHARIEYSNGR-FSFDSSDP 65

Query: 169 NI--YPSLGALVLHYA 182
           ++  +P +  L+ HY 
Sbjct: 66  SVPRFPCVVELIEHYV 81

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198179 cd09925, SH2_SHC, Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 4/45 (8%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCL 154
           +MSR  AE+LL  + DG FL+R STT  GQY L+ + +G PKH L
Sbjct: 13  KMSRRDAESLL--QTDGDFLVRESTTTPGQYVLTGMQNGQPKHLL 55

SHC is involved in a wide variety of pathways including regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. An adapter protein, SHC has been implicated in Ras activation following the stimulation of a number of different receptors, including growth factors [insulin, epidermal growth factor (EGF), nerve growth factor, and platelet derived growth factor (PDGF)], cytokines [interleukins 2, 3, and 5], erythropoietin, and granulocyte/macrophage colony-stimulating factor, and antigens [T-cell and B-cell receptors]. SHC has been shown to bind to tyrosine-phosphorylated receptors, and receptor stimulation leads to tyrosine phosphorylation of SHC. Upon phosphorylation, SHC interacts with another adapter protein, Grb2, which binds to the Ras GTP/GDP exchange factor mSOS which leads to Ras activation. SHC is composed of an N-terminal domain that interacts with proteins containing phosphorylated tyrosines, a (glycine/proline)-rich collagen-homology domain that contains the phosphorylated binding site, and a C-terminal SH2 domain. SH2 has been shown to interact with the tyrosine-phosphorylated receptors of EGF and PDGF and with the tyrosine-phosphorylated C chain of the T-cell receptor, providing one of the mechanisms of T-cell-mediated Ras activation. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198218 cd10355, SH2_DAPP1_BAM32_like, Src homology 2 domain found in dual adaptor for phosphotyrosine and 3-phosphoinositides ( DAPP1)/B lymphocyte adaptor molecule of 32 kDa (Bam32)-like proteins

 Score = 49.4 bits (118), Expect = 2e-08
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 113 MSRAQAEA-LLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++R  AEA LLS   DG++L+R S   TG ++LS+    + KH  V  T   F F   FN
Sbjct: 13  LTRHAAEALLLSNGVDGSYLLRNSNEGTGLFSLSVRAKDSVKHFHVEYTGYSFKFG--FN 70

Query: 170 IYPSLGALVLHYA 182
            + SL   V H+A
Sbjct: 71  EFSSLQDFVKHFA 83

DAPP1/Bam32 contains a putative myristoylation site at its N-terminus, followed by a SH2 domain, and a pleckstrin homology (PH) domain at its C-terminus. DAPP1 could potentially be recruited to the cell membrane by any of these domains. Its putative myristoylation site could facilitate the interaction of DAPP1 with the lipid bilayer. Its SH2 domain may also interact with phosphotyrosine residues on membrane-associated proteins such as activated tyrosine kinase receptors. And finally its PH domain exhibits a high-affinity interaction with the PtdIns(3,4,5)P(3) PtdIns(3,4)P(2) second messengers produced at the cell membrane following the activation of PI 3-kinases. DAPP1 is thought to interact with both tyrosine phosphorylated proteins and 3-phosphoinositides and therefore may play a role in regulating the location and/or activity of such proteins(s) in response to agonists that elevate PtdIns(3,4,5)P(3) and PtdIns(3,4)P(2). This protein is likely to play an important role in triggering signal transduction pathways that lie downstream from receptor tyrosine kinases and PI 3-kinase. It is likely that DAPP1 functions as an adaptor to recruit other proteins to the plasma membrane in response to extracellular signals. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 92

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 106 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVY 156
           E+ +  ++ R  AE LL   G P GTFLIR S T  G Y+LS+           KH  + 
Sbjct: 3   EEWFFGKIKRKDAEKLLLAPGNPRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIR 62

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYAANS 185
           + + G  +      +P+L  LV HY+ ++
Sbjct: 63  KLDNGGYYITTRATFPTLQELVQHYSKDA 91

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 113 MSRAQAEALLSGRPDGTFLIR--PSTTGQYALSIVCSGAPKHCLVY 156
           +SR +AE LLSG  DG++LIR      G Y LS+  +G  K+  +Y
Sbjct: 13  ISREEAEQLLSGASDGSYLIRESSRDDGYYTLSLRFNGKVKNYKLY 58

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETER----GFG 163
           ++SR  AEALL   G  DG FL+R ST+  G Y LS++  G   H   Y+  R     F 
Sbjct: 7   KISREVAEALLLREGGRDGLFLVRESTSAPGDYVLSLLAQGEVLH---YQIRRHGEDAFF 63

Query: 164 FAEPFNIYPSLGALVLHY 181
             +   I+  L  L+ HY
Sbjct: 64  SDDGPLIFHGLDTLIEHY 81

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198268 cd10405, SH2_Vav1, Src homology 2 (SH2) domain found in the Vav1 proteins

 Score = 45.8 bits (108), Expect = 6e-07
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 100 DLPHHDEKTWLVR-MSRAQAEALLSGRPDGTFLIRPST--TGQYALSIVCSGAPKHCLVY 156
           DL  H    W    M RA AE++L+ R DGT+L+R       ++A+SI  +   KH  + 
Sbjct: 1   DLSVH---LWYAGPMERAGAESILANRSDGTYLVRQRVKDAAEFAISIKYNVEVKHIKIM 57

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYAANSLEE 188
             E  +   E    +  L  LV  Y  NSL++
Sbjct: 58  TAEGLYRITEK-KAFRGLTELVEFYQQNSLKD 88

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav1 plays a role in T-cell and B-cell development and activation. It has been identified as the specific binding partner of Nef proteins from HIV-1, resulting in morphological changes, cytoskeletal rearrangements, and the JNK/SAPK signaling cascade, leading to increased levels of viral transcription and replication. Vav1 has been shown to interact with Ku70, PLCG1, Lymphocyte cytosolic protein 2, Janus kinase 2, SIAH2, S100B, Abl gene, ARHGDIB, SHB, PIK3R1, PRKCQ, Grb2, MAPK1, Syk, Linker of activated T cells, Cbl gene and EZH2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++SR +AE LL    DG FL+R ST   G Y L +   G  +H  V          E   
Sbjct: 9   KISREEAERLLQPPEDGLFLVRESTNYPGDYTLCVSFEGKVEHYRVIYRNGKLTIDEE-E 67

Query: 170 IYPSLGALVLHYAANS 185
            + +L  LV HY  ++
Sbjct: 68  YFENLIQLVEHYTKDA 83

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198270 cd10407, SH2_Vav3, Src homology 2 (SH2) domain found in the Vav3 proteins

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPST--TGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M R QAE  L  R + T+L+R  T  +G+YA+SI  +   KH  +   +  F  AE    
Sbjct: 12  MERLQAETELINRVNSTYLVRHRTKESGEYAISIKYNNEVKHIKILTRDGFFHIAEN-RK 70

Query: 171 YPSLGALVLHYAANSLEE 188
           + SL  LV +Y  +SL+E
Sbjct: 71  FKSLMELVEYYKHHSLKE 88

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav3 preferentially activates RhoA, RhoG and, to a lesser extent, Rac1. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. VAV3 has been shown to interact with Grb2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198207 cd10344, SH2_SLAP, Src homology 2 domain found in Src-like adaptor proteins

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 109 WL-VRMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVYET 158
           WL   +SR +AE LL   G   G+FLIR S T  G Y+LS+   G+      KH  ++  
Sbjct: 12  WLFEGLSREKAEELLMLPGNQVGSFLIRESETRRGCYSLSVRHRGSQSRDSVKHYRIFRL 71

Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANS 185
           + G+ +  P   +  L  +V HY+ ++
Sbjct: 72  DNGWFYISPRLTFQCLEDMVNHYSESA 98

SLAP belongs to the subfamily of adapter proteins that negatively regulate cellular signaling initiated by tyrosine kinases. It has a myristylated N-terminus, SH3 and SH2 domains with high homology to Src family tyrosine kinases, and a unique C-terminal tail, which is important for c-Cbl binding. SLAP negatively regulates platelet-derived growth factor (PDGF)-induced mitogenesis in fibroblasts and regulates F-actin assembly for dorsal ruffles formation. c-Cbl mediated SLAP inhibition towards actin remodeling. Moreover, SLAP enhanced PDGF-induced c-Cbl phosphorylation by SFK. In contrast, SLAP mitogenic inhibition was not mediated by c-Cbl, but it rather involved a competitive mechanism with SFK for PDGF-receptor (PDGFR) association and mitogenic signaling. Accordingly, phosphorylation of the Src mitogenic substrates Stat3 and Shc were reduced by SLAP. Thus, we concluded that SLAP regulates PDGFR signaling by two independent mechanisms: a competitive mechanism for PDGF-induced Src mitogenic signaling and a non-competitive mechanism for dorsal ruffles formation mediated by c-Cbl. SLAP is a hematopoietic adaptor containing Src homology (SH)3 and SH2 motifs and a unique carboxy terminus. Unlike c-Src, SLAP lacks a tyrosine kinase domain. Unlike c-Src, SLAP does not impact resorptive function of mature osteoclasts but induces their early apoptosis. SLAP negatively regulates differentiation of osteoclasts and proliferation of their precursors. Conversely, SLAP decreases osteoclast death by inhibiting activation of caspase 3. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR  AE LLS   +G+FL+R S +  GQY++S+   G   H  + E   G  +    +
Sbjct: 9   PISRNAAEYLLSSGINGSFLVRESESSPGQYSISLRYDGRVYHYRISEDSDGKVYVTQEH 68

Query: 170 IYPSLGALVLHYAANS 185
            + +L  LV H++ N+
Sbjct: 69  RFNTLAELVHHHSKNA 84

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 113 MSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAP-KHCLVYETERG---FGFA 165
           +S  +AE LL  +   G+FL+R S +  G + LS+        H ++   + G    G  
Sbjct: 7   LSGKEAEKLLLEKGKPGSFLVRESQSKPGDFVLSVRTDDDKVTHIMIR-CQGGKYDVGGG 65

Query: 166 EPFNIYPSLGALVLHYAANSLEEHNDDLIFL 196
           E F+   SL  LV HY  N + E +  ++ L
Sbjct: 66  EEFD---SLTDLVEHYKKNPMVETSGTVVHL 93

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198249 cd10386, SH2_SOCS5, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSI 144
           M R +AEALL G+P+GTFL+R S    Y  S+
Sbjct: 7   MDRYEAEALLEGKPEGTFLLRDSAQEDYLFSV 38

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198269 cd10406, SH2_Vav2, Src homology 2 (SH2) domain found in the Vav2 proteins

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 113 MSRAQAEALLSGRPDGTFLI--RPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M R Q + LL     GT+LI  RP+   ++A+SI  +   KH  V E +      E    
Sbjct: 12  MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KK 70

Query: 171 YPSLGALVLHYAANSLEE 188
           + SL  LV +Y  +SL+E
Sbjct: 71  FESLLELVEYYQCHSLKE 88

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav2 is a GEF for RhoA, RhoB and RhoG and may activate Rac1 and Cdc42. Vav2 has been shown to interact with CD19 and Grb2. Alternatively spliced transcript variants encoding different isoforms have been found for Vav2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 113 MSRAQAEA--LLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           + RA AE   L S    G FLIR S +  G+++LS++  G  KH  +   + G  F    
Sbjct: 10  IKRADAEKQLLYSENQTGAFLIRESESQKGEFSLSVLDGGVVKHYRIRRLDEGGFFLTRR 69

Query: 169 NIYPSLGALVLHYAANS 185
             + +L   V +Y   S
Sbjct: 70  KTFSTLNEFVNYYTTTS 86

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198220 cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases D and E (ShkD and ShkE)

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 7/35 (20%)

Query: 103 HHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTT 137
           H D       +SR +AE  L GRP+GTFLIR S+T
Sbjct: 14  HGD-------ISRDEAEKRLRGRPEGTFLIRLSST 41

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkD and shkE. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 87

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 12/82 (14%)

Query: 113 MSRAQAEALLSGRPDGTFLIR-----PSTTGQYALSIVCSGAPKHCLVYETE-RGFGF-A 165
           + R  AE LL  + DG FL+R          +  LS+   G  +H ++   +   +    
Sbjct: 13  LPREDAEELL--KNDGDFLVRKTEPKGGGKRKLVLSVRWDGKIRHFVINRDDGGKYYIEG 70

Query: 166 EPFNIYPSLGALVLHYAANSLE 187
           + F    S+  L+ +Y      
Sbjct: 71  KSFK---SISELINYYQKTKEP 89

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 112 RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERG--FGFAE 166
           ++SRA+AE +L   RPDG FLIR S  + G ++LS+      +H  V     G  F +  
Sbjct: 9   KISRAEAEEILMNQRPDGAFLIRESESSPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 68

Query: 167 PFNIYPSLGALVLHYAANS 185
            FN   SL  LV ++   S
Sbjct: 69  KFN---SLNELVDYHRTTS 84

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|198181 cd09927, SH2_Tensin_like, Src homology 2 domain found in Tensin-like proteins

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 25/89 (28%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAP-----------------KHC 153
           +SR QA ALL  +P GTFL+R STT  G Y L++  +  P                 +H 
Sbjct: 10  ISRDQAIALLKDKPPGTFLVRDSTTYKGAYGLAVKVATPPPGVNPFEAKGDPESELVRHF 69

Query: 154 LVYETERGF---GFA-EPFNIYPSLGALV 178
           L+  + +G    G   EP   + SL ALV
Sbjct: 70  LIEPSPKGVKLKGCPNEPV--FGSLSALV 96

SH2 domain found in Tensin-like proteins. The Tensins are a family of intracellular proteins that interact with receptor tyrosine kinases (RTKs), integrins, and actin. They are thought act as signaling bridges between the extracellular space and the cytoskeleton. There are four homologues: Tensin1, Tensin2 (TENC1, C1-TEN), Tensin3 and Tensin4 (cten), all of which contain a C-terminal tandem SH2-PTB domain pairing, as well as actin-binding regions that may localize them to focal adhesions. The isoforms of Tensin2 and Tensin3 contain N-terminal C1 domains, which are atypical and not expected to bind to phorbol esters. Tensins 1-3 contain a phosphatase (PTPase) and C2 domain pairing which resembles PTEN (phosphatase and tensin homologue deleted on chromosome 10) protein. PTEN is a lipid phosphatase that dephosphorylates phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) to yield phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). As PtdIns(3,4,5)P3 is the product of phosphatidylinositol 3-kinase (PI3K) activity, PTEN is therefore a key negative regulator of the PI3K pathway. Because of their PTEN-like domains, the Tensins may also possess phosphoinositide-binding or phosphatase capabilities. However, only Tensin2 and Tensin3 have the potential to be phosphatases since only their PTPase domains contain a cysteine residue that is essential for catalytic activity. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 116

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 39.8 bits (93), Expect = 8e-05
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           R++R QAE LL+    +G FLIR S +  G Y++S+   G  KH  V   +  +   +  
Sbjct: 7   RITRHQAETLLNEHGHEGDFLIRDSESNPGDYSVSLKAPGRNKHFKVQVVDNVYCIGQ-- 64

Query: 169 NIYPSLGALVLHYAA 183
             + ++  LV HY  
Sbjct: 65  RKFHTMDELVEHYKK 79

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQ--YALSIVCSGAPKHCLVYETERG---FG-FAE 166
           ++R +AE+LL    +G++L+R S + +  Y+LS+  +    H  +   E G    G F+ 
Sbjct: 8   ITRIEAESLLRPCKEGSYLVRNSESTKQDYSLSLKSAKGFMHMRIQRNETGQYILGQFSR 67

Query: 167 PFNIYPSLGALVLHYAANSL 186
           PF    ++  ++ HY  N L
Sbjct: 68  PF---ETIPEMIRHYCLNKL 84

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 113 MSRAQAEALL--SGRPDGTFLIRPST--TGQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           + R +A  +L      DG+FL+R S    G Y L++V      H  +   +  + + +  
Sbjct: 7   LDRNEAVEILKQKADADGSFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDKWFYIDDG 66

Query: 169 NIYPSLGALVLHY 181
             + SL  L+ HY
Sbjct: 67  PYFESLEHLIEHY 79

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|198262 cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain found in Tec protein, Bmx

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 105 DEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPST-TGQYALSIVC------SGAPKHCLV 155
           D   W    +SR+Q+E LL  +  +G F++R S+  G Y +S+         G  KH  V
Sbjct: 4   DAYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHV 63

Query: 156 YET-ERGFGFAEPFNIYPSLGALVLHYAANS 185
           +   E     AE +  + S+  L+ ++  NS
Sbjct: 64  HTNAENKLYLAENY-CFDSIPKLIHYHQHNS 93

A member of the Tec protein tyrosine kinase Bmx is expressed in the endothelium of large arteries, fetal endocardium, adult endocardium of the left ventricle, bone marrow, lung, testis, granulocytes, myeloid cell lines, and prostate cell lines. Bmx is involved in the regulation of Rho and serum response factor (SRF). Bmx has been shown to interact with PAK1, PTK2, PTPN21, and RUFY1. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains. It is not present in Txk and the type 1 splice form of the Drosophila homolog. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 109 WLVR-MSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIV--CSGAP--KHCLVYETERG 161
           W V  MSR +AE+LL     +G F++R S+T G Y +S+     G+P  KH  + +  R 
Sbjct: 8   WYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTVSLFTKVPGSPHVKHYHIKQNARS 67

Query: 162 -FGFAEPFNIYPSLGALVLHYAANS 185
            F  AE    + ++  L+ ++  NS
Sbjct: 68  EFYLAEKH-CFETIPELINYHQHNS 91

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSI 144
           MS   AE +LS +PDG+FL+R S+  +Y  S+
Sbjct: 17  MSWEDAEKVLSNKPDGSFLVRDSSDDRYIFSL 48

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198229 cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain found in Yes

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 106 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 156
           E+ +  +M R  AE LL   G   G FL+R S  T G Y+LSI     V     KH  + 
Sbjct: 3   EEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIR 62

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIF 195
           + + G  +      + +L  LV HY      EH D L  
Sbjct: 63  KLDNGGYYITTRAQFDTLQKLVKHYT-----EHADGLCH 96

Yes is a member of the Src non-receptor type tyrosine kinase family of proteins. Yes is the cellular homolog of the Yamaguchi sarcoma virus oncogene. In humans it is encoded by the YES1 gene which maps to chromosome 18 and is in close proximity to thymidylate synthase. A corresponding Yes pseudogene has been found on chromosome 22. YES1 has been shown to interact with Janus kinase 2, CTNND1,RPL10, and Occludin. Yes1 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198254 cd10391, SH2_SHE, Src homology 2 domain found in SH2 domain-containing adapter protein E (SHE)

 Score = 37.6 bits (87), Expect = 5e-04
 Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTG--QYALSIVCSGAPKHCLVYET-ERGFGFAEPFN 169
           +SRA+AE+ L    + ++L+R S +G  +Y++++  S    H +V +T +  +   +   
Sbjct: 8   ISRAEAESRLQPCKEASYLVRNSESGNSKYSIALKTSQGCVHIIVAQTKDNKYTLNQTSA 67

Query: 170 IYPSLGALVLHYAANSL 186
           ++ S+  +V +Y+   L
Sbjct: 68  VFDSIPEVVHYYSNEKL 84

SHE is expressed in heart, lung, brain, and skeletal muscle. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198230 cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain found in Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, Fgr

 Score = 36.8 bits (85), Expect = 0.001
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 106 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSI 144
           E+ +  ++ R  AE  L   G P G FLIR S  T G Y+LSI
Sbjct: 3   EEWYFGKIGRKDAERQLLSPGNPRGAFLIRESETTKGAYSLSI 45

Fgr is a member of the Src non-receptor type tyrosine kinase family of proteins. The protein contains N-terminal sites for myristoylation and palmitoylation, a PTK domain, and SH2 and SH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. Fgr is expressed in B-cells and myeloid cells, localizes to plasma membrane ruffles, and functions as a negative regulator of cell migration and adhesion triggered by the beta-2 integrin signal transduction pathway. Multiple alternatively spliced variants, encoding the same protein, have been identified Fgr has been shown to interact with Wiskott-Aldrich syndrome protein. Fgr has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198223 cd10360, SH2_Srm, Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm)

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 113 MSRAQAEALLSGRPD--GTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           +SR QA+ LL   P+  G FLIRPS +  G Y+LS+       H  +     G  + +  
Sbjct: 7   ISRTQAQQLLLSPPNEPGAFLIRPSESSLGGYSLSVRAQAKVCHYRICMAPSGSLYLQKG 66

Query: 169 NIYPSLGALVLHY 181
            ++P L  L+ +Y
Sbjct: 67  RLFPGLEELLAYY 79

Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 79

>gnl|CDD|198250 cd10387, SH2_SOCS6, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTTGQY--ALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            ++R +AE  L+  PDG+FL+R S+  +Y  +LS    G   H  +  +   F F E  +
Sbjct: 16  PITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPD 75

Query: 170 I--YPSLGALVLH 180
           +  + S+  L+ H
Sbjct: 76  VEGHTSIVDLIEH 88

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|198219 cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases A and C (ShkA and ShkC)

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAP-KH 152
           +S +++E  L+G+P+GTFL+R ST+  G Y +S V       H
Sbjct: 17  ISTSESENRLNGKPEGTFLVRFSTSEPGAYTISKVSKNGGISH 59

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkA and shkC. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 113

>gnl|CDD|198174 cd09918, SH2_Nterm_SPT6_like, N-terminal Src homology 2 (SH2) domain found in Spt6

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSI---VCSGAPKHCLVYETERGFGFA 165
           ++  QAEA L  +  G  +IRPS+ G   L++   V  G  +H  + E  +   F+
Sbjct: 8   VNYKQAEAYLKSKDVGEVVIRPSSKGVDHLTVTWKVADGVYQHIDIEELNKENPFS 63

N-terminal SH2 domain in Spt6. Spt6 is an essential transcription elongation factor and histone chaperone that binds the C-terminal repeat domain (CTD) of RNA polymerase II. Spt6 contains a tandem SH2 domain with a novel structure and CTD-binding mode. The tandem SH2 domain binds to a serine 2-phosphorylated CTD peptide in vitro, whereas its N-terminal SH2 subdomain does not. CTD binding requires a positively charged crevice in the C-terminal SH2 subdomain, which lacks the canonical phospho-binding pocket of SH2 domains. The tandem SH2 domain is apparently required for transcription elongation in vivo as its deletion in cells is lethal in the presence of 6-azauracil. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 85

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           ++SR +A  +L      G+FL+R S  T G Y+LS   +   KH  +  T     F    
Sbjct: 6   KISREEAYNMLVKVGGPGSFLVRESDNTPGDYSLSFRVNEGIKHFKIIPTGNN-QFMMGG 64

Query: 169 NIYPSLGALVLHY 181
             + SL  ++  Y
Sbjct: 65  RYFSSLDDVIDRY 77

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198180 cd09926, SH2_CRK_like, Src homology 2 domain found in cancer-related signaling adaptor protein CRK

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSI 144
           D  +W    MSR +A+ LL G+  G FL+R S+T  G Y LS+
Sbjct: 5   DRSSWYFGPMSRQEAQELLQGQRHGVFLVRDSSTIPGDYVLSV 47

SH2 domain in the CRK proteins. CRKI (SH2-SH3) and CRKII (SH2-SH3-SH3) are splicing isoforms of the oncoprotein CRK. CRKs regulate transcription and cytoskeletal reorganization for cell growth and motility by linking tyrosine kinases to small G proteins. The SH2 domain of CRK associates with tyrosine-phosphorylated receptors or components of focal adhesions, such as p130Cas and paxillin. CRK transmits signals to small G proteins through effectors that bind its SH3 domain, such as C3G, the guanine-nucleotide exchange factor (GEF) for Rap1 and R-Ras, and DOCK180, the GEF for Rac6. The binding of p130Cas to the CRK-C3G complex activates Rap1, leading to regulation of cell adhesion, and activates R-Ras, leading to JNK-mediated activation of cell proliferation, whereas the binding of CRK DOCK180 induces Rac1-mediated activation of cellular migration. The activity of the different splicing isoforms varies greatly with CRKI displaying substantial transforming activity, CRKII less so, and phosphorylated CRKII with no biological activity whatsoever. CRKII has a linker region with a phosphorylated Tyr and an additional C-terminal SH3 domain. The phosphorylated Tyr creates a binding site for its SH2 domain which disrupts the association between CRK and its SH2 target proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198248 cd10385, SH2_SOCS4, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSI 144
           M +  AEALL G+P+GTFL+R S    Y  S+
Sbjct: 17  MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSV 48

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198231 cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain found in Fyn

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 106 EKTWLVRMSRAQAE-ALLS-GRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 156
           E+ +  ++ R  AE  LLS G P GTFLIR S  T G Y+LSI     +     KH  + 
Sbjct: 3   EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 62

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYA 182
           + + G  +      + +L  LV HY+
Sbjct: 63  KLDNGGYYITTRAQFETLQQLVQHYS 88

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198282 cd10419, SH2_Src_Fyn_isoform_b_like, Src homology 2 (SH2) domain found in Fyn isoform b like proteins

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 107 KTWLV-RMSRAQAE-ALLS-GRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 156
           + W   ++ R  AE  LLS G P GTFLIR S  T G Y+LSI     +     KH  + 
Sbjct: 3   EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 62

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIF 195
           + + G  +      + +L  LV HY+     E  D L F
Sbjct: 63  KLDNGGYYITTRAQFETLQQLVQHYS-----EKADGLCF 96

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform b type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
2y3a_B	302	Crystal Structure Of P110beta In Complex With Icsh2		1e-27
1bfi_A	112	Solution Structure Of The C-Terminal Sh2 Domain Of		5e-26
1qad_A	111	Crystal Structure Of The C-Terminal Sh2 Domain Of T		5e-26
1h9o_A	112	Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C		6e-25
3hhm_B	373	Crystal Structure Of P110alpha H1047r Mutant In Com		1e-20
1fu5_A	111	Nmr Structure Of The N-Sh2 Domain Of The P85 Subuni		2e-06
2iug_A	120	Crystal Structure Of The Pi3-Kinase P85 N-Terminal		3e-06
2rd0_B	279	Structure Of A Human P110alpha/p85alpha Complex Len		4e-06
2pna_A	104	Structure Of An Sh2 Domain Of The P85 Alpha Subunit		5e-06
1oo3_A	111	P395s Mutant Of The P85 Regulatory Subunit Of The N		2e-05
2lct_A	107	Solution Structure Of The Vav1 Sh2 Domain Complexed		4e-05
1mil_A	104	Transforming Protein Length = 104		5e-05
2crh_A	138	Solution Structure Of The Sh2 Domain Of Human Proto		9e-05
2eob_A	124	Solution Structure Of The Second Sh2 Domain From Ra		9e-05
1r1p_A	100	Structural Basis For Differential Recognition Of Ty		9e-05
1tce_A	107	Solution Nmr Structure Of The Shc Sh2 Domain Comple		1e-04
2lnw_A	122	Identification And Structural Basis For A Novel Int		1e-04
2dlz_A	118	Solution Structure Of The Sh2 Domain Of Human Prote		2e-04
2fci_A	105	Structural Basis For The Requirement Of Two Phospho		7e-04

>pdb|2Y3A|B Chain B, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 302

Iteration: 1
 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/95 (58%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Query: 101 LPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYET 158
           LPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+  G YA S+V  G  KHC++Y T
Sbjct: 188 LPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRT 247
Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             GFGFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 248 ATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDAL 282

>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The P85alpha Regulatory Subunit Of Phosphoinositide 3-Kinase, Nmr, 30 Structures Length = 112

Iteration: 1
 Score =  114 bits (284), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 100 DLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
           DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +
Sbjct: 3   DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 62
Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 63  TATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 98

>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85 Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase: An Sh2 Domain Mimicking Its Own Substrate Length = 111

Iteration: 1
 Score =  113 bits (283), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 100 DLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
           DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +
Sbjct: 2   DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 61
Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 62  TATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 97

>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-Terminal Sh2 Domain Complexed With A Tyr751 Phosphopeptide From The Pdgf Receptor, Crystal Structure At 1.79 A Length = 112

Iteration: 1
 Score =  110 bits (274), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 101 LPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYET 158
           +PHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +T
Sbjct: 4   IPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKT 63
Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
             G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 64  ATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 98

>pdb|3HHM|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha And The Drug Wortmannin Length = 373

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 100 DLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
           DLPHHDEKTW V  S R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +
Sbjct: 294 DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 353
Query: 158 TERGFGFAEPFNIYPSLGAL 177
           T  G+GFAEP+N+Y SL  L
Sbjct: 354 TATGYGFAEPYNLYSSLKEL 373

>pdb|1FU5|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of Pi3- Kinase Complexed To A Doubly Phosphorylated Peptide Derived From Polyomavirus Middle T Antigen Length = 111

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P  
Sbjct: 18  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPL- 76
Query: 170 IYPSLGALVLHYAANSLEEHN 190
            + S+  L+ HY   SL ++N
Sbjct: 77  TFNSVVELINHYRNESLAQYN 97

>pdb|2IUG|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2 Domain Length = 120

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P  
Sbjct: 18  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 76
Query: 170 IYPSLGALVLHYAANSLEEHN 190
            + S+  L+ HY   SL ++N
Sbjct: 77  TFSSVVELINHYRNESLAQYN 97

>pdb|2RD0|B Chain B, Structure Of A Human P110alpha/p85alpha Complex Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P  
Sbjct: 17  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 75
Query: 170 IYPSLGALVLHYAANSLEEHN 190
            + S+  L+ HY   SL ++N
Sbjct: 76  TFSSVVELINHYRNESLAQYN 96

>pdb|2PNA|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of Phosphatidylinositol-3-Oh Kinase Length = 104

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P  
Sbjct: 11  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 69
Query: 170 IYPSLGALVLHYAANSLEEHN 190
            + S+  L+ HY   SL ++N
Sbjct: 70  TFNSVVELINHYRNESLAQYN 90

>pdb|1OO3|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N- Terminal Src Homology 2 Domain Of Pi3-Kinase Length = 111

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++   
Sbjct: 18  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDSL- 76
Query: 170 IYPSLGALVLHYAANSLEEHN 190
            + S+  L+ HY   SL ++N
Sbjct: 77  TFNSVVELINHYRNESLAQYN 97

>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A Syk-Derived Doubly Phosphorylated Peptide Length = 107

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M RA AE++L+ R DGTFL+R       ++A+SI  +   KH  +   E  +   E    
Sbjct: 16  MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEK-KA 74
Query: 171 YPSLGALVLHYAANSLEE 188
           +  L  LV  Y  NSL++
Sbjct: 75  FRGLTELVEFYQQNSLKD 92

>pdb|1MIL|A Chain A, Transforming Protein Length = 104

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 159
           ++SR +AEALL  + +G FL+R STT  GQY L+ + SG PKH L+ + E
Sbjct: 13  KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60

>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto- Oncogene Protein Vav1 Length = 138

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M RA AE++L+ R DGTFL+R       ++A+SI  +   KH  +   E  +   E    
Sbjct: 33  MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEK-KA 91
Query: 171 YPSLGALVLHYAANSLEE 188
           +  L  LV  Y  NSL++
Sbjct: 92  FRGLTELVEFYQQNSLKD 109

>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc Gamma-2 Length = 124

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 104 HDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPST-TGQYALSIVCSGAPKHCLVYETER 160
           H+ K W   R+SR +AE +L   P DG FLIR    T  YA++    G  KHC +    R
Sbjct: 16  HESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRINRDGR 75
Query: 161 GFGFAEPFNIYPSLGALVLHYAANSL 186
            F        + SL  LV +Y  ++L
Sbjct: 76  HFVLGTS-AYFESLVELVSYYEKHAL 100

>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of Tyrosine Phosphorylated Sites In The Linker For Activation Of T Cells (lat) By The Adaptor Protein Gads Length = 100

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAEPF 168
           +SR QAE LL G+  G F+IR S +  G +++S+      +H  V    +G  F + E F
Sbjct: 16  LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKF 75
Query: 169 NIYPSLGALVLHYAANSLEEHN 190
              PSL  LV +Y   S+ +  
Sbjct: 76  ---PSLNKLVDYYRTTSISKQK 94

>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed With A Tyrosine-Phosphorylated Peptide From The T-Cell Receptor, Minimized Average Structure Length = 107

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 159
           ++SR +AEALL  + +G FL+R STT  GQY L+   SG PKH L+ + E
Sbjct: 13  KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPE 60

>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel Interaction Between Vav2 And Arap3 Length = 122

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 113 MSRAQAEALLSGRPDGTFLI--RPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M R Q + LL     GT+LI  RP+   ++A+SI  +   KH  V E +      E    
Sbjct: 29  MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KK 87
Query: 171 YPSLGALVLHYAANSLEE 188
           + SL  LV +Y  +SL+E
Sbjct: 88  FDSLLELVEYYQCHSLKE 105

>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein Vav-2 Length = 118

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 113 MSRAQAEALLSGRPDGTFLI--RPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M R Q + LL     GT+LI  RP+   ++A+SI  +   KH  V E +      E    
Sbjct: 23  MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KK 81
Query: 171 YPSLGALVLHYAANSLEE 188
           + SL  LV +Y  +SL+E
Sbjct: 82  FDSLLELVEYYQCHSLKE 99

>pdb|2FCI|A Chain A, Structural Basis For The Requirement Of Two Phosphotyrosines In Signaling Mediated By Syk Tyrosine Kinase Length = 105

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 104 HDEKTWL-VRMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
           H+ K W    ++RAQAE +L   P DG FL+R       YA+S    G  KHC V +
Sbjct: 6   HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQ 62

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	3e-39
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	2e-38
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	5e-30
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	8e-23
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	1e-27
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	5e-25
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	1e-24
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	2e-24
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	2e-21
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	3e-20
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	8e-20
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	1e-19
2dly_A	121	FYN-related kinase; BRK family kinase, structural	2e-19
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	2e-19
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	2e-19
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	5e-19
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	6e-19
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	7e-19
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	7e-19
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	1e-18
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	9e-19
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	1e-18
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	1e-18
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	2e-18
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	4e-18
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	4e-17
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	6e-18
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	5e-14
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	9e-18
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	9e-18
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	9e-18
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	1e-17
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	2e-17
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	2e-17
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	3e-17
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	5e-17
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	5e-17
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	1e-16
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	2e-16
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	2e-16
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	2e-16
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	4e-16
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	5e-16
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	7e-16
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	8e-16
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	1e-15
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-15
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	2e-15
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	5e-15
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-14
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	3e-14
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	6e-14
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-14
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	1e-13
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	1e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-12
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	2e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-11
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-12
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	3e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-12
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	5e-12
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-10
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	2e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-09
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	3e-08
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	8e-08
1uur_A	473	Stata protein, STAT protein; transcription activat	2e-07
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	3e-07
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	8e-07
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	9e-07
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	1e-06
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	2e-06
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	3e-06
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	4e-06
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	8e-05

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score =  135 bits (340), Expect = 3e-39
 Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 2/103 (1%)

Query: 94  LNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           L   E  LPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+  G YA S+V  G  K
Sbjct: 181 LMEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTK 240

Query: 152 HCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLI 194
           HC++Y T  GFGFAEP+N+Y SL  LVLHY   SL +HND L 
Sbjct: 241 HCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALT 283

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score =  127 bits (321), Expect = 2e-38
 Identities = 53/96 (55%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 101 LPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYET 158
           +PHHDEKTW V   +R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +T
Sbjct: 4   IPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKT 63

Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLI 194
             G+GFAEP+N+Y SL  LVLHY   SL +HND L 
Sbjct: 64  ATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLN 99

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score =  112 bits (281), Expect = 5e-30
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)

Query: 94  LNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPK 151
           L   + DLPHHDEKTW V   +R +AE LL G+ DGTFL+R S+  G YA S+V  G  K
Sbjct: 288 LVEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVK 347

Query: 152 HCLVYETERGFGFAEPFNIYPSLGAL 177
           HC++ +T  G+GFAEP+N+Y SL  L
Sbjct: 348 HCVINKTATGYGFAEPYNLYSSLKEL 373

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 93.0 bits (230), Expect = 8e-23
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P 
Sbjct: 16  DISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL 75

Query: 169 NIYPSLGALVLHYAANSLEEHNDDLI 194
             + S+  L+ HY   SL ++N  L 
Sbjct: 76  T-FSSVVELINHYRNESLAQYNPKLD 100

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 99.6 bits (249), Expect = 1e-27
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 159
            +    W    M R Q + LL     GT+LIR       ++A+SI  +   KH  V E +
Sbjct: 12  DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKD 71

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLI 194
                 E    + SL  LV +Y  +SL+E    L 
Sbjct: 72  NWIHITEAKK-FDSLLELVEYYQCHSLKESFKQLD 105

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 93.6 bits (233), Expect = 5e-25
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            M RA AE++L+ R DGTFL+R       ++A+SI  +   KH  +   E  +   E   
Sbjct: 32  PMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEK-K 90

Query: 170 IYPSLGALVLHYAANSLEEHNDDL 193
            +  L  LV  Y  NSL++    L
Sbjct: 91  AFRGLTELVEFYQQNSLKDCFKSL 114

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 91.5 bits (228), Expect = 1e-24
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR QAE LL G+  G F+IR S +  G +++S+      +H  V    +G  F     
Sbjct: 15  GLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT-E 73

Query: 170 IYPSLGALVLHYAANSLEEHNDDLI 194
            +PSL  LV +Y   S+ +     +
Sbjct: 74  KFPSLNKLVDYYRTTSISKQKQVFL 98

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 92.0 bits (229), Expect = 2e-24
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P 
Sbjct: 17  DISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL 76

Query: 169 NIYPSLGALVLHYAANSLEEHNDDLI 194
             + S+  L+ HY   SL ++N  L 
Sbjct: 77  T-FSSVVELINHYRNESLAQYNPKLD 101

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 83.5 bits (207), Expect = 2e-21
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 101 LPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYE 157
           +   ++ +W    +SR+ AE LLS   +G+FL+R S +  GQ ++S+   G   H  +  
Sbjct: 10  VNSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 69

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEH 189
           T  G  +    + + +L  LV H++  +    
Sbjct: 70  TADGKVYVTAESRFSTLAELVHHHSTVADGLV 101

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 81.2 bits (201), Expect = 3e-20
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETER 160
           H+ K W   R+SR +AE +L   P DG FLIR    T  YA++    G  KHC +    R
Sbjct: 16  HESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRINRDGR 75

Query: 161 GFGFAEPFNIYPSLGALVLHYAANSLEEH 189
            F        + SL  LV +Y  ++L   
Sbjct: 76  HFVLGTSAY-FESLVELVSYYEKHALYRK 103

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 79.6 bits (197), Expect = 8e-20
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR  AE LLS   +G+FL+R S +  GQ ++S+   G   H  +     G  +    +
Sbjct: 11  PVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSES 70

Query: 170 IYPSLGALVLHYAANS 185
            + +L  LV H++  +
Sbjct: 71  RFNTLAELVHHHSTVA 86

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 79.3 bits (196), Expect = 1e-19
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALLS-GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           ++ RA+AE +LS  R DG FLIR S +  G ++LS+      +H  V     G  F    
Sbjct: 12  KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV- 70

Query: 169 NIYPSLGALVLHYAANSL 186
             + SL  LV ++ + S+
Sbjct: 71  VKFNSLNELVDYHRSTSV 88

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 78.9 bits (195), Expect = 2e-19
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 102 PHHDEKTWLV-RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVY 156
                + W    + RA AE  L  S    G FLIR S +  G ++LS++  G  KH  + 
Sbjct: 11  RSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIR 70

Query: 157 ETERGFGFAEPFNIYPSLGALVLHYAANSL 186
             + G  F     ++ +L   V +Y   S 
Sbjct: 71  RLDEGGFFLTRRKVFSTLNEFVNYYTTTSD 100

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 79.1 bits (195), Expect = 2e-19
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 99  RDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 155
            +L    ++ W    ++R +AE  L+  PDG+FL+R S+      +LS    G   H  +
Sbjct: 16  EELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRI 75

Query: 156 YETERGFGFAEP--FNIYPSLGALVLHYAANSL 186
             +   F F E      + S+  L+ H   +S 
Sbjct: 76  EHSNGRFSFYEQPDVEGHTSIVDLIEHSIGDSE 108

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 78.0 bits (193), Expect = 2e-19
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 112 RMSRAQAEALLS-GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           ++ RA+AE +LS  R DG FLIR S +  G ++LS+      +H  V     G  F    
Sbjct: 9   KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV- 67

Query: 169 NIYPSLGALVLHYAANSLEE 188
             + SL  LV ++ + S+  
Sbjct: 68  VKFNSLNELVDYHRSTSVSR 87

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 77.4 bits (191), Expect = 5e-19
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 3/102 (2%)

Query: 95  NRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTTGQ-YALSIVCSGAPKH 152
             +   L       W    +SR  AE LL  +P G+FLIR S +   Y LS     +  H
Sbjct: 4   GSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCH 63

Query: 153 CLVYETERGFGF-AEPFNIYPSLGALVLHYAANSLEEHNDDL 193
            +V   + G          + SL ALV  +    +E   + L
Sbjct: 64  FMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELL 105

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 76.8 bits (190), Expect = 6e-19
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++S  +A   L    DG FL+R S    G Y L +       H  V   +      E   
Sbjct: 11  KISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEA-V 69

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  +V HY+ +  
Sbjct: 70  FFCNLMDMVEHYSKDKG 86

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 76.9 bits (190), Expect = 7e-19
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETER 160
            D   W +  +SR +A+  L G+  G FL+R S+T  G Y LS+  +    H ++     
Sbjct: 16  SDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPN 75

Query: 161 GFGFAEPFNIYPSLGALVLHYAANSL 186
                     +  L AL+  Y  + L
Sbjct: 76  RRFKIGD-QEFDHLPALLEFYKIHYL 100

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 80.3 bits (198), Expect = 7e-19
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            ++R +AE  L   G  DG +L+R S    G +ALS+       H  +     G      
Sbjct: 11  NITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAG 70

Query: 168 FNIYPSLGALVLHYAANS 185
              + S   L  +++  S
Sbjct: 71  GRTHASPADLCHYHSQES 88

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 80.0 bits (197), Expect = 1e-18
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 102 PHHDEKTWLV-RMSRAQAEALL--SGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
             H++  W   ++SR ++E ++    + +G FLIR     G YAL ++  G   H  + +
Sbjct: 153 TAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDK 212

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANS 185
            + G         + +L  LV HY+  +
Sbjct: 213 DKTGKLSIPEGKKFDTLWQLVEHYSYKA 240

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 76.5 bits (189), Expect = 9e-19
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +++R QAE LL     G FL+R ST   G Y L +   G  +H  +          E   
Sbjct: 14  KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEE-V 72

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  LV HY +++ 
Sbjct: 73  YFENLMQLVEHYTSDAD 89

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 76.4 bits (188), Expect = 1e-18
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 18/96 (18%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           R+SR +A ALL G+  G FL+R S+T  G Y LS+  +    H ++  +           
Sbjct: 6   RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPA 65

Query: 170 I----------------YPSLGALVLHYAANSLEEH 189
                            + SL AL+  Y  + L+  
Sbjct: 66  QPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTT 101

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 78.4 bits (193), Expect = 1e-18
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 100 DLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVY 156
           DL   +        M +  AEALL G+P+GTFL+R S      +++S        H  + 
Sbjct: 27  DLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE 86

Query: 157 ETERGFGFAE---PFNIYPSLGALVLHYAANSL 186
           +    F F          P +  L+ HY   S 
Sbjct: 87  QWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSA 119

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 75.8 bits (187), Expect = 2e-18
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            ++  +AE LL  R  DG+FL RPS +  G + LS+  +GA  H  +  T   +      
Sbjct: 13  NITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGG- 71

Query: 169 NIYPSLGALVLHYAANSL 186
             + +L  LV +Y  +  
Sbjct: 72  EKFATLAELVQYYMEHHG 89

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 78.4 bits (193), Expect = 4e-18
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 102 PHHDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
             H+   W    ++R +AE  L    + DG FL+RP    G YALS++      H L+ +
Sbjct: 154 TAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQ 213

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANS 185
            + G         + +L  LV +    +
Sbjct: 214 DKAGKYCIPEGTKFDTLWQLVEYLKLKA 241

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 76.1 bits (187), Expect = 4e-17
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            +SRA+AE  L  +G  DG FL+R      G Y LS+V      H  +     G      
Sbjct: 12  SISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAG 71

Query: 168 FNIYPSLGALVLHYAANS 185
              +     L   Y+ + 
Sbjct: 72  GKAHCGPAELCEFYSRDP 89

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 77.6 bits (191), Expect = 6e-18
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 102 PHHDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYET 158
             H+ K W    ++RAQAE +L   P DG FL+R       YA+S    G  KHC V + 
Sbjct: 117 NAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQE 176

Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSL 186
            +        + + SL  L+ +Y  + L
Sbjct: 177 GQTVML--GNSEFDSLVDLISYYEKHPL 202

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 66.9 bits (163), Expect = 5e-14
 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 17/104 (16%)

Query: 104 HDEKTW------LVRMSRAQAEALL------SGRPDGTFLIRPSTT--GQYALSIVCSGA 149
           H  + W        R  R  AE LL      +G PDG+FL+R S T  G Y LS   +G 
Sbjct: 1   HSSEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGK 60

Query: 150 PKHCLVYETE---RGFGFAEPFNIYPSLGALVLHYAANSLEEHN 190
            +HC ++  +       F     ++ SL  L+ HY    L  + 
Sbjct: 61  VQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNE 104

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 73.8 bits (182), Expect = 9e-18
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFA-EP 167
            ++R QAE  L+ R  +G FLIR S +    +++S+  SG  KH  V   +  +      
Sbjct: 11  NVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRR 70

Query: 168 FNIYPSLGALVLHYAANSL-EEHNDDLIFL 196
           F    ++  LV HY    +    + + ++L
Sbjct: 71  F---HTMDELVEHYKKAPIFTSEHGEKLYL 97

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 75.6 bits (186), Expect = 9e-18
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
           M+  +A+  L   P+GTFLIR S+       +S+  S  P +  +   +  F       +
Sbjct: 24  MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICV 83

Query: 171 ------YPSLGALVLHYAANSL 186
                 + S+  L+ +Y     
Sbjct: 84  KSKLKQFDSVVHLIDYYVQMCK 105

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 74.7 bits (184), Expect = 9e-18
 Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 94  LNRTERDLPHHDEKTWLV-RMSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIVCS--- 147
           +   E  +  ++   W    M+R+QAE LL     +G F++R S+  G+Y +S+      
Sbjct: 1   MTEAEDSIEMYE---WYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTG 57

Query: 148 ---GAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSL 186
              G  +H +V  T +   +    +++ ++  L+ ++  NS 
Sbjct: 58  DPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNSA 99

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 73.5 bits (181), Expect = 1e-17
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGF-----G 163
            +++ + EALL  G  DG FLIR S +  G   L +          ++  + G+      
Sbjct: 9   CLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETD 68

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
              P  I+P+L  LV  Y    
Sbjct: 69  AHTPRTIFPNLQELVSKYGKPG 90

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 73.5 bits (181), Expect = 2e-17
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF-AEPF 168
            + R +A+ LL  +  G FL+R S    G+Y LS+   G  +H ++   +  + F    F
Sbjct: 23  AIPRIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGF 80

Query: 169 NIYPSLGALVLHYAANSLEEHNDDLIFL 196
               ++  L+ H+            + L
Sbjct: 81  ---SNIPQLIDHHYTTKQVITKKSGVVL 105

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 73.9 bits (182), Expect = 2e-17
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 104 HDEKTWLV-RMSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIV------CSGAPKHCL 154
            +   W    ++R QAE LL     +G F++R S   G Y +S+          A KH  
Sbjct: 13  LEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQ 72

Query: 155 VYETERGFGFAEPFNIYPSLGALVLHYAANSL 186
           + + + G  +    + + S+  L+ ++  N+ 
Sbjct: 73  IKKNDSGQWYVAERHAFQSIPELIWYHQHNAA 104

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 72.6 bits (179), Expect = 3e-17
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            +SR++A   L   G   G FLIR S      Y LS+  + A +H  ++    G      
Sbjct: 8   CISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNE 67

Query: 168 FNIYPSLGALVLHYAANSL 186
              + SL  LV ++ A SL
Sbjct: 68  AVSFLSLPELVNYHRAQSL 86

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 72.3 bits (178), Expect = 5e-17
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 112 RMSRAQAEALL---SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAE 166
            +SR +A  L+        G FL+R S T  G+  L+    G  KH  +     G    +
Sbjct: 15  MLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQ 74

Query: 167 PFNIYPSLGALVLHYAANSL 186
               + S+  ++ H+  + +
Sbjct: 75  -HLHFQSIFDMLEHFRVHPI 93

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 72.3 bits (178), Expect = 5e-17
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 104 HDEKTWLV-RMSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIVCS------GAPKHCL 154
            D+  W    +SR+Q+E LL     +G F++R S+  G Y +S+         G  KH  
Sbjct: 8   LDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYH 67

Query: 155 VYETERGFGFAEPFNIYPSLGALVLHYAANSL 186
           V+       +      + S+  L+ ++  NS 
Sbjct: 68  VHTNAENKLYLAENYCFDSIPKLIHYHQHNSA 99

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 70.8 bits (174), Expect = 1e-16
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++SR +AEALL  + +G FL+R STT  GQY L+ + SG PKH L+ + E      +   
Sbjct: 13  KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHR- 69

Query: 170 IYPSLGALVLHYAANSL 186
            + S+  L+ ++  N L
Sbjct: 70  -FESVSHLISYHMDNHL 85

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 72.3 bits (177), Expect = 2e-16
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF------ 164
           ++  +A  LLS  P GTFLIR S+     + LS+      K+  +      F        
Sbjct: 30  VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRS 89

Query: 165 AEPFNIYPSLGALVLHYAANSL 186
            +P   +  +  LV HY     
Sbjct: 90  TQPVPRFDCVLKLVHHYMPPPG 111

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 70.4 bits (173), Expect = 2e-16
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG----FG 163
           R+SR ++  ++   G  DG FL+R S +    + L++      K+  +   E      F 
Sbjct: 11  RISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFS 70

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
             +    +  L  LV  Y  N 
Sbjct: 71  LDDGNTKFSDLIQLVDFYQLNK 92

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 70.8 bits (174), Expect = 2e-16
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG----FG 163
           R+SR +++ L+   G  DG FL+R S      + LS+      KH L+  +E      F 
Sbjct: 20  RISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFS 79

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
             +    +  L  LV  +  N 
Sbjct: 80  MDDGQTRFTDLLQLVEFHQLNR 101

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 69.6 bits (171), Expect = 4e-16
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVYETERGF 162
            +SR  AE  L   G   G+FLIR S +  G ++LS+           KH  +   + G 
Sbjct: 10  NLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGG 69

Query: 163 GFAEPFNIYPSLGALVLHYAANS 185
            +  P   +P L  LV HY   S
Sbjct: 70  FYISPRITFPGLHELVRHYTNAS 92

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 69.7 bits (171), Expect = 5e-16
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGF-----G 163
           ++SR   E LL +   DG++L+R S +  G Y L ++  G      V +TE G       
Sbjct: 10  KISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETA 69

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
                  +  +  L+  +    
Sbjct: 70  PGVHKRYFRKIKNLISAFQKPD 91

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 69.2 bits (170), Expect = 7e-16
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 112 RMSRAQAEALLSGR-PDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGF-----G 163
            ++R++AE LLS    DG+FL+R S +    YAL ++         +   E         
Sbjct: 16  NITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQAS 75

Query: 164 FAEPFNIYPSLGALVLHYAANSL 186
                  +  L  L+  Y   ++
Sbjct: 76  EGVSMRFFTKLDQLIEFYKKENM 98

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 69.4 bits (170), Expect = 8e-16
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGF-----G 163
           ++SR   E LL +   DG++L+R S +  G Y L ++  G      V +TE G       
Sbjct: 10  KISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETA 69

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
                  +  +  L+  +    
Sbjct: 70  PGVHKRYFRKIKNLISAFQKPD 91

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 69.6 bits (170), Expect = 1e-15
 Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 11/124 (8%)

Query: 81  PDTSCPPMPSLSA--LNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT 137
            DTS       S          +    E  +    ++  +A  LLS  P GTFLIR S+ 
Sbjct: 6   LDTSLRLKTFSSKSEYQLVVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSD 65

Query: 138 --GQYALSIVCSGAPKHCLVYETERGFGF------AEPFNIYPSLGALVLHYAANSLEEH 189
               + LS+      K+  +      F         +P   +  +  LV HY        
Sbjct: 66  QRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPPQALPG 125

Query: 190 NDDL 193
           +   
Sbjct: 126 STPK 129

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 68.1 bits (167), Expect = 2e-15
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 159
           H+ K W   ++S+ +A  LL       +FL+RPS    G Y+L    +   +   +  T 
Sbjct: 13  HEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTP 72

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANSLEEH 189
               F      Y S+G ++ HY    + E 
Sbjct: 73  NN-QFMMGGRYYNSIGDIIDHYRKEQIVEG 101

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 68.4 bits (167), Expect = 2e-15
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 22/104 (21%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAP---------- 150
              K W    +SR QA ALL  +  G FLIR S +  G Y L++  +  P          
Sbjct: 17  DTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDP 76

Query: 151 -----KHCLVYETERGF---GFAEPFNIYPSLGALVLHYAANSL 186
                +H L+    +G    G       + SL ALV  ++ + +
Sbjct: 77  VEQLVRHFLIETGPKGVKIKGCPSEP-YFGSLSALVSQHSISPI 119

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 67.4 bits (165), Expect = 5e-15
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF--- 164
           ++SR +A+ L+   G  DG FL+R S +    + LS+      KH  +   E        
Sbjct: 32  KISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHT 91

Query: 165 -AEPFNIYPSLGALVLHYAANS 185
             +    +  L  LV  Y  N 
Sbjct: 92  LDDGHTRFTDLIQLVEFYQLNK 113

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR  AE LLS   +G+FL+R S +  GQ ++S+   G   H  +     G  +    +
Sbjct: 111 PVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSES 170

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  LV H++  + 
Sbjct: 171 RFNTLAELVHHHSTVAD 187

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 65.0 bits (159), Expect = 3e-14
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCS-----GAPKHCLVYETERGF 162
           ++ R  AE  L   G P GTFLIR S T  G Y+LSI           KH  + + + G 
Sbjct: 11  KLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGG 70

Query: 163 GFAEPFNIYPSLGALVLHYAANS 185
            +      + +L  LV HY+  +
Sbjct: 71  YYITTRAQFETLQQLVQHYSERA 93

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 64.4 bits (157), Expect = 6e-14
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCS---GAPKHCLVYETERGFGFA- 165
            +SR +A  +L   P  G  ++RP +    Y+++I         KH  V    + +    
Sbjct: 21  TVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIEL 80

Query: 166 EPFNIYPSLGALVLHYAANS 185
           E     P+L +++ ++   +
Sbjct: 81  EKPVTLPNLFSVIDYFVKET 100

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 63.9 bits (156), Expect = 7e-14
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
            + RA+   LL     G FL+R S    +Y LS++  G P+H ++   +  +        
Sbjct: 22  AIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEG--EG 77

Query: 171 YPSLGALVLHYAANSL 186
           +PS+  L+ H  +   
Sbjct: 78  FPSIPLLIDHLLSTQQ 93

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 64.1 bits (156), Expect = 1e-13
 Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 10/85 (11%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT----GQYALSIVCSGAPKHCLVYETERGFGFA- 165
              R  AE  L     DG+FLIR S+       Y L    +    +  V   E    +A 
Sbjct: 29  ACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYAL 88

Query: 166 ----EPFNIYPSLGALVLHYAANSL 186
                    + S+  +V  +  N L
Sbjct: 89  GKKKNGEEYFGSVVEIVNSHQHNPL 113

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 64.3 bits (155), Expect = 1e-12
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETER 160
            D   W +  +SR +A+  L G+  G FL+R S+T  G Y LS+  +    H ++     
Sbjct: 9   SDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPN 68

Query: 161 GFGFAEPFNIYPSLGALVLHYAAN 184
              F      +  L AL+  Y  +
Sbjct: 69  RR-FKIGDQEFDHLPALLEFYKIH 91

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAE--P 167
           +++R QAE LL     G FL+R ST   G Y L + C G  +H  +          E   
Sbjct: 86  KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVY 145

Query: 168 FNIYPSLGALVLHYAANS 185
           F    +L  LV HY  ++
Sbjct: 146 F---ENLMQLVEHYTTDA 160

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 60.1 bits (146), Expect = 2e-12
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 104 HDEKTWLV-RMSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIVCSGAP------KHCL 154
            +   W    +SR +AE LL     +G F++R S T G Y +S+            KH  
Sbjct: 6   LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYH 65

Query: 155 VYETERGFG--FAEPFNIYPSLGALVLHYAANS 185
           + ET       +     ++ S+  L+ ++  N 
Sbjct: 66  IKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNG 98

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 63.8 bits (155), Expect = 2e-12
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            +SRA+AE  L  +G  DG FL+R      G Y LS+V      H  +     G      
Sbjct: 14  SISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAG 73

Query: 168 FNIYPSLGALVLHYAANS 185
              +     L   Y+ + 
Sbjct: 74  GKAHCGPAELCEFYSRDP 91

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            ++R +AE  L    + DG FL+RP    G YALS++      H L+ + + G       
Sbjct: 167 SLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEG 226

Query: 169 NIYPSLGALVLHYAANS 185
             + +L  LV +    +
Sbjct: 227 TKFDTLWQLVEYLKLKA 243

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETER 160
            +  +W   R+SR +A ALL G+  G FL+R S+T  G Y LS+  +    H ++  +  
Sbjct: 10  EERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGP 69

Query: 161 GFGFAEPFNIYPS 173
                      P 
Sbjct: 70  RPPVPPSPAQPPP 82

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP----KHCLVYETERGFG 163
            +SR  AE  L       G+FLIR S +  G ++LS+          KH  +   + G  
Sbjct: 18  TISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGY 77

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
           +  P   +P+L ALV HY+   
Sbjct: 78  YISPRITFPTLQALVQHYSKKG 99

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 170
            + RA+   LL     G FL+R S    +Y LS++  G P+H ++   +  +        
Sbjct: 19  AIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEG-- 74

Query: 171 YPSLGALVLHYAANS 185
           +PS+  L+ H  +  
Sbjct: 75  FPSIPLLIDHLLSTQ 89

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 59.9 bits (145), Expect = 5e-12
 Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 114 SRAQAEALL------SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFG-- 163
           SR  AE LL      +G  DGTFL+R S T    Y LS   SG  +HC +  T       
Sbjct: 31  SRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMK 90

Query: 164 -FAEPFNIYPSLGALVLHYAANSLEEH 189
            +      + S+ AL+ HY    L   
Sbjct: 91  YYLTDNLTFNSIYALIQHYREAHLRCA 117

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 57.8 bits (139), Expect = 1e-10
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 102 PHHDEKTWLVRMSRAQAEALLS-GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYET 158
                  +  ++ RA+AE +LS  R DG FLIR S +  G ++LS+      +H  V   
Sbjct: 54  EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRD 113

Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSL 186
             G  +      + SL  LV ++ + S+
Sbjct: 114 GAGK-YFLWVVKFNSLNELVDYHRSTSV 140

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 58.1 bits (139), Expect = 2e-10
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETER 160
            +  +W   R+SR +A ALL G+  G FL+R S+T  G Y LS+  +    H ++  +  
Sbjct: 8   EERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGP 67

Query: 161 GFGFAE 166
                 
Sbjct: 68  RPPVPP 73

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSI-----VCSGAPKHCLVYETERGF 162
            +SR  AE  L   G   G+F+IR S T  G Y+LS+           KH  +   + G 
Sbjct: 76  GISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGG 135

Query: 163 GFAEPFNIYPSLGALVLHYAANS 185
            +  P + + +L  LV HY   +
Sbjct: 136 FYISPRSTFSTLQELVDHYKKGN 158

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVYETERGF 162
           +++R ++E LL  +  P GTFL+R S T  G Y LS+           KH  + + + G 
Sbjct: 71  KITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGG 130

Query: 163 GFAEPFNIYPSLGALVLHYAANS 185
            +      + SL  LV +Y+ ++
Sbjct: 131 FYITSRTQFNSLQQLVAYYSKHA 153

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 104 HDEKTWLVRMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCL 154
             E+ +  +++R ++E LL  +  P GTFL+R S T  G Y LS+           KH  
Sbjct: 146 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 205

Query: 155 VYETERGFGFAEPFNIYPSLGALVLHYAANS 185
           + + + G  +      + SL  LV +Y+ ++
Sbjct: 206 IRKLDSGGFYITSRTQFNSLQQLVAYYSKHA 236

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 50.1 bits (119), Expect = 3e-08
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 9/105 (8%)

Query: 90  SLSALNRTERDLPHHDEKTWLVRMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIV 145
                N   +      E  +   +SR  AE  L   G   G+FLIR S +  G ++LS+ 
Sbjct: 58  GFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVR 117

Query: 146 CSGAP-----KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANS 185
                     KH  +   + G  +  P   +P L  LV HY   S
Sbjct: 118 DFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNAS 162

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 48.2 bits (114), Expect = 8e-08
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 109 WLVRMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAP----KHCLVYETERG 161
             +++SR +A+ LL   P  G  L+RPS       +++           +H  V      
Sbjct: 24  CFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPK 83

Query: 162 F--GFAEPFNIYPSLGALVLHYAANS 185
           +     +PF+   SL A+V ++ +++
Sbjct: 84  YVIDVEQPFSC-TSLDAVVNYFVSHT 108

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A* Length = 473

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 8/97 (8%)

Query: 89  PSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVC 146
            S+  L           E      M R +    L  +  GTF+IR S    GQ+ ++ + 
Sbjct: 334 KSMQTLRYQRHISTLWQEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIG 393

Query: 147 ---SGAPKHCLVYETERGFG---FAEPFNIYPSLGAL 177
                  KH LV   +       F +  + +     L
Sbjct: 394 VEMPARIKHYLVQPNDTAAAKKTFPDFLSEHSQFVNL 430

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPSTT-GQYALSIVCS---GAPKHCLVY 156
            + +++    MSR +A  LL       GTFL+R S+  G+Y+L++  +    A  H L+ 
Sbjct: 9   FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE 68

Query: 157 ETERGF------GFAEPFNIYPSLGALVLHYAANSLEEHNDD 192
             E         G       +P + AL+ H+    L E +  
Sbjct: 69  RGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLL 110

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 45.1 bits (106), Expect = 9e-07
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 117 QAEALLSGRPDGTFLIRPSTT--GQYALSIVCS-GAPKHCLVYETERGFGFAEPFNIYPS 173
           +A +      DG + IR S+T  G+  +    +    ++  ++E +  F       ++ S
Sbjct: 34  KATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEV-LFVS 92

Query: 174 LGALVLHYAANSLEEHNDDLI 194
           +G++V HY  + L  H   L+
Sbjct: 93  VGSMVEHYHTHVLPSHQSLLL 113

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPSTT-GQYALSIVCSGAP---KHCLVY 156
            + +++    MSR +A  LL       GTFL+R S+  G+Y+L++  +       H L+ 
Sbjct: 38  FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE 97

Query: 157 ETERGFGFAEP--FNI----YPSLGALVLHYAANSLEEHN 190
             E            I    +P + AL+ H+    L E +
Sbjct: 98  RGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEAS 137

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 112 RMSRAQAEALLSGR-PDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF--AE 166
            +S   AE LL GR   G+FL RPS    G ++LS+       H  +  +   +     E
Sbjct: 8   DLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGE 67

Query: 167 PFNIYPSLGALVLHYAAN--SLEEHNDDLIFL 196
            F    +L  LV +Y      L++ +  +I L
Sbjct: 68  KF---ATLTELVEYYTQQQGVLQDRDGTIIHL 96

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 112 RMSRAQAEALLSGR-PDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF--AE 166
            ++  +AE LL  R  DG+FL RPS +  G   LS+  +GA  H  +  T   +     E
Sbjct: 10  NITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGE 69

Query: 167 PFNIYPSLGALVLHY--AANSLEEHNDDLIFL 196
            F    +L  LV +Y      L+E N D+I L
Sbjct: 70  KF---ATLAELVQYYMEHHGQLKEKNGDVIEL 98

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 45.3 bits (107), Expect = 4e-06
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 112 RMSRAQAEALLSGR-PDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF--AE 166
            +S   AE LL GR   G+FL RPS    G ++LS+       H  +  +   +     E
Sbjct: 8   DLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGE 67

Query: 167 PFNIYPSLGALVLHYAAN--SLEEHNDDLIFL 196
            F    +L  LV +Y      L++ +  +I L
Sbjct: 68  KF---ATLTELVEYYTQQQGVLQDRDGTIIHL 96

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae} Length = 178

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTTGQY-ALSI-VCSGAPKHCLVYETERGFGFAEPFNI 170
            +  ++E  L       FLIR  +   Y  L I   S    H  + E    +  +     
Sbjct: 20  FNVTESENYLRSST-DDFLIRKGSRHGYCVLVIKFASDVFVHMKIEEHSEHYTCSN--KH 76

Query: 171 YPSLGALVLHYAANSLEEHNDDLI 194
           +  +  ++  Y    +  +   + 
Sbjct: 77  FEDIDEVISVYVRP-ILRNLKSIK 99

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.96
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.95
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.94
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.92
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.92
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.92
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.92
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.92
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.92
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.92
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.92
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.92
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.92
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.92
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.91
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.91
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.91
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.91
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.91
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.91
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.91
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.91
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.9
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.9
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.9
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.9
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.9
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.9
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.9
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.9
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.9
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.9
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.9
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.9
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.9
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.9
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.9
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.9
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.89
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.89
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.89
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.88
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.88
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.88
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.88
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.88
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.87
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.87
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.87
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.87
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.87
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.86
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.86
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.86
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.86
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.85
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.85
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.85
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.85
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.85
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.83
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.82
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.82
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.82
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.81
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.8
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.68
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.79
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.72
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.71
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.71
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.71
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.67
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.67
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.63
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.61
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.28
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	98.5
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	98.46
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	98.21
1uur_A	473	Stata protein, STAT protein; transcription activat	97.87
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	97.81
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	97.27
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	97.2
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	96.95
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	96.85
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	96.65
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	96.57
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	96.53
1y1u_A	585	Signal transducer and activator of transcription;	96.47
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	96.43
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	96.43
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	96.34
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	96.33
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	96.19
1yvl_A	683	Signal transducer and activator of transcription 1	96.16
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	96.15
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	96.1
1u3o_A	82	Huntingtin-associated protein-interacting protein;	96.07
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	96.06
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	95.97
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	95.95
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	95.95
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	95.95
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	95.94
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	95.93
1i07_A	60	Epidermal growth factor receptor kinase substrate	95.9
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	95.86
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	95.82
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	95.82
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	95.76
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	95.75
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	95.7
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	95.68
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	95.66
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	95.63
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	95.6
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	95.6
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	95.6
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	95.59
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	95.56
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	95.56
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	95.53
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	95.49
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	95.48
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	95.48
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	95.42
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	95.41
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	95.4
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	95.39
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	95.39
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	95.35
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	95.34
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	95.33
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	95.32
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	95.31
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	95.3
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	95.27
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	95.25
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	95.24
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	95.24
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	95.23
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	95.2
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	95.19
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	95.17
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	95.16
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	95.15
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	95.14
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	95.13
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	95.12
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	95.11
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	95.1
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	95.09
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	95.08
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	95.07
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	95.07
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	95.07
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	95.03
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	95.02
1awj_A	77	ITK; transferase, regulatory intramolecular comple	95.0
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	94.97
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	94.96
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	94.95
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	94.94
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	94.89
1wxb_A	68	Epidermal growth factor receptor pathway substrate	94.88
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	94.82
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	94.81
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	94.8
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	94.8
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	94.8
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	94.79
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	94.79
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	94.78
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	94.78
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	94.74
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	94.72
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	94.71
1bf5_A	575	Signal transducer and activator of transcription 1	94.71
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	94.67
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	94.67
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	94.65
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	94.63
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	94.57
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	94.56
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	94.55
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	94.53
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	94.51
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	94.5
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	94.49
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	94.46
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	94.44
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	94.44
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	94.44
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	94.42
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	94.42
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	94.41
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	94.4
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	94.4
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	94.4
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	94.39
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	94.33
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	94.33
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	94.33
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	94.33
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	94.33
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	94.31
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	94.29
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	94.26
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	94.26
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	94.25
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	94.25
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	94.23
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	94.22
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	94.22
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	94.2
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	94.18
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	94.17
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	94.02
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	94.02
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	94.01
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	93.95
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	93.93
3u23_A	65	CD2-associated protein; structural genomics, struc	93.9
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	93.88
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	93.86
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	93.81
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	93.75
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	93.73
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	93.68
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	93.68
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	93.67
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	93.65
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	93.63
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	93.63
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	93.63
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	93.61
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	93.59
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	93.53
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	93.52
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	93.48
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	93.28
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	93.22
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	93.21
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	93.05
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	93.0
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	92.94
3op0_A	323	Signal transduction protein CBL-C; structural geno	92.91
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	92.9
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	92.87
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	92.79
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	92.72
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	92.65
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	92.61
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	92.58
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	92.45
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	92.16
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	91.93
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	91.87
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	91.69
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	91.32
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	91.27
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	91.09
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	91.02
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	89.11
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	89.07
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	88.88
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	88.86
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	88.06
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	87.4
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	87.12
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	87.17
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	86.78
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	86.36
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	85.52
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	85.42
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	82.64
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	82.33
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	81.77
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	81.23
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	80.84

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.96  E-value=1.4e-28  Score=195.36  Aligned_cols=129  Identities=25%  Similarity=0.333  Sum_probs=109.2

Q ss_pred             CCCCCCcceec--CCccccccc-cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcc
Q psy13388         32 GGRLGPGYSIA--DPGVASRGL-SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKT  108 (196)
Q Consensus        32 ~~~~~~~~~~~--dp~~~~~~~-~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~  108 (196)
                      ..+.|+.+.++  |.+||.... ..|++|+||.|||.+..                                  .++.++
T Consensus        30 s~~~Gd~i~v~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~----------------------------------~l~~~~   75 (175)
T 4d8k_A           30 GFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKAN----------------------------------SLEPEP   75 (175)
T ss_dssp             CBCTTCEEEEEECCSSEEEEEETTTCCEEEEEGGGEEETT----------------------------------CSTTCT
T ss_pred             ccccCCEEEEEccCCCEEEEEECCCCceeeeccccccccc----------------------------------cccccc
Confidence            34567776643  457886544 68999999999998754                                  245679


Q ss_pred             ccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        109 WLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      ||| .|+|++||++|+.  +++|+||||+|  .+|.|+|||+.     .++|+||+|.+..+|.|++.....|+||.+||
T Consensus        76 w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV  155 (175)
T 4d8k_A           76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV  155 (175)
T ss_dssp             TBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHH
T ss_pred             eecCcccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHH
Confidence            999 9999999999975  57999999999  89999999998     77899999998878889988778999999999


Q ss_pred             HHHhhCCccccccccc
Q psy13388        179 LHYAANSLEEHNDDLI  194 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l~  194 (196)
                      +||++++++++..+..
T Consensus       156 ~~y~~~~~gl~~~L~~  171 (175)
T 4d8k_A          156 RHYTNASDGLCTRLSR  171 (175)
T ss_dssp             HHHHHCCTTSSSCCCS
T ss_pred             HHHhhCCCCCcccCCC
Confidence            9999999999887643

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.95  E-value=2e-28  Score=181.63  Aligned_cols=97  Identities=24%  Similarity=0.367  Sum_probs=88.4

Q ss_pred             cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCccccc-cCCHHHHHHHHhCCCCceE
Q psy13388         52 SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTF  130 (196)
Q Consensus        52 ~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~Wy~-~isR~eAe~lL~~~~~G~F  130 (196)
                      ++|++||||.||++.                                      +.++||| .|+|++||++|++.++|+|
T Consensus         2 ~~g~~G~ip~n~v~~--------------------------------------~~~~Wyhg~isR~~Ae~lL~~~~~G~F   43 (111)
T 2eo3_A            2 SSGSSGMSSARFDSS--------------------------------------DRSAWYMGPVSRQEAQTRLQGQRHGMF   43 (111)
T ss_dssp             CCCCCCSCSCCCCTT--------------------------------------CHHHHEEESCCHHHHHHHHSSCCTTCE
T ss_pred             CCCcccccccccccc--------------------------------------CCCCcccCCCCHHHHHHHhcCCCCceE
Confidence            478999999999854                                      3369999 9999999999998899999


Q ss_pred             EEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHhhCCcc
Q psy13388        131 LIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLE  187 (196)
Q Consensus       131 LVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~~~~l~  187 (196)
                      |||+|  .+|.|+|||+..++|+||+|.+..+|.|++.. ..|+||.+||+||+++++.
T Consensus        44 LVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV~~y~~~~l~  101 (111)
T 2eo3_A           44 LVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGD-QEFDHLPALLEFYKIHYLD  101 (111)
T ss_dssp             EEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEETT-CCBSSHHHHHHHHTTSCSS
T ss_pred             EEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECC-cccCCHHHHHHHHhhCCCC
Confidence            99999  68999999999999999999987778888874 7999999999999999987

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.94  E-value=5.7e-27  Score=176.30  Aligned_cols=92  Identities=26%  Similarity=0.361  Sum_probs=82.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      .++.++||| .|+|++||++|..  .++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.||
T Consensus        12 ~l~~~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eL   91 (121)
T 2dly_A           12 SLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEF   91 (121)
T ss_dssp             GGGGCSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEETTEEESSHHHH
T ss_pred             ccCcCCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECCCCccCCHHHH
Confidence            356789999 9999999999974  58999999999  789999999999999999999877788888777899999999


Q ss_pred             HHHHhhCCccccccccc
Q psy13388        178 VLHYAANSLEEHNDDLI  194 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l~  194 (196)
                      |+||++++++++..+..
T Consensus        92 V~~y~~~~~~l~~~L~~  108 (121)
T 2dly_A           92 VNYYTTTSDGLCVKLEK  108 (121)
T ss_dssp             HHHHTTCCSSSSSCCCS
T ss_pred             HHHHhhCCCCCceeCCe
Confidence            99999999998776543

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=168.97  Aligned_cols=92  Identities=26%  Similarity=0.354  Sum_probs=82.7

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|.||.+||+
T Consensus        12 ~l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   91 (119)
T 2ecd_A           12 SLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVH   91 (119)
T ss_dssp             CCCCSSSEEEECCHHHHHHHHHTSCTTBEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHH
T ss_pred             ccccCccccCCCCHHHHHHHhcCCCCCeEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHH
Confidence            356789999 999999999999889999999999  78999999999999999999987778888877789999999999


Q ss_pred             HHhhCCccccccccc
Q psy13388        180 HYAANSLEEHNDDLI  194 (196)
Q Consensus       180 hY~~~~l~~~~~~l~  194 (196)
                      ||++++++++..+..
T Consensus        92 ~y~~~~~gl~~~L~~  106 (119)
T 2ecd_A           92 HHSTVADGLVTTLHY  106 (119)
T ss_dssp             HHHHCCTTSSSCCCB
T ss_pred             HHhhCCCCCceECCC
Confidence            999999888765543

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.92  E-value=4.2e-25  Score=163.86  Aligned_cols=90  Identities=56%  Similarity=0.988  Sum_probs=80.5

Q ss_pred             CCCCCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        100 DLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       100 ~l~~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      +++.++.++||| .|+|++||++|++.++|+||||+| .++.|+|||+.+++|+||+|.+.++|++++.....|+||.+|
T Consensus         3 ~~~~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~L   82 (112)
T 1h9o_A            3 PIPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL   82 (112)
T ss_dssp             SCGGGSGGGTBCCSCCHHHHHHHHTTCCTTEEEEEECSSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHH
T ss_pred             CCccccCCCcccCCCCHHHHHHHhcCCCCceEEEeecCCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHH
Confidence            345678889999 999999999998889999999999 899999999999999999999988777666656789999999


Q ss_pred             HHHHhhCCcccc
Q psy13388        178 VLHYAANSLEEH  189 (196)
Q Consensus       178 I~hY~~~~l~~~  189 (196)
                      |+||+++++...
T Consensus        83 V~~y~~~~l~~~   94 (112)
T 1h9o_A           83 VLHYQHTSLVQH   94 (112)
T ss_dssp             HHHHHHSCGGGT
T ss_pred             HHHHhhCccccc
Confidence            999999877654

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.92  E-value=4.3e-25  Score=159.76  Aligned_cols=90  Identities=22%  Similarity=0.292  Sum_probs=81.5

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      |+.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+. +|.|++.....|+||.+||+|
T Consensus         2 L~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~Lv~~   80 (98)
T 3us4_A            2 LSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHR-DGHLTIDEAVFFCNLMDMVEH   80 (98)
T ss_dssp             CTTCTTBCCSCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEE-TTEEESSSSSEESSHHHHHHH
T ss_pred             CccCcccCCCCCHHHHHHHccCCCCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEe-CCEEEECCCCccCCHHHHHHH
Confidence            46689999 999999999998889999999999  78999999999999999999985 467888777899999999999


Q ss_pred             HhhCCccccccccc
Q psy13388        181 YAANSLEEHNDDLI  194 (196)
Q Consensus       181 Y~~~~l~~~~~~l~  194 (196)
                      |++++++++..+..
T Consensus        81 y~~~~~~l~~~L~~   94 (98)
T 3us4_A           81 YSKDKGAICTKLVR   94 (98)
T ss_dssp             HHHCCTTSSSCCCS
T ss_pred             hhhCCCCCeEcCCc
Confidence            99999999887654

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.92  E-value=4.4e-25  Score=163.49  Aligned_cols=90  Identities=26%  Similarity=0.344  Sum_probs=82.8

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|.||.+||+|
T Consensus         2 L~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~   81 (112)
T 3k2m_A            2 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHH   81 (112)
T ss_dssp             GGGSTTEEESCCHHHHHHHTTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHH
T ss_pred             CccCcceeeCCCHHHHHHHhccCCCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHHH
Confidence            46689999 999999999998889999999999  799999999999999999999887888888777899999999999


Q ss_pred             HhhCCcccccccc
Q psy13388        181 YAANSLEEHNDDL  193 (196)
Q Consensus       181 Y~~~~l~~~~~~l  193 (196)
                      |+.++++++..+.
T Consensus        82 y~~~~~~l~~~L~   94 (112)
T 3k2m_A           82 HSTVADGLITTLH   94 (112)
T ss_dssp             HHHCCTTSSSCCC
T ss_pred             HhhCCCCCccCCC
Confidence            9999998887654

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.92  E-value=3.3e-25  Score=167.17  Aligned_cols=90  Identities=17%  Similarity=0.160  Sum_probs=78.9

Q ss_pred             CcCccccc-cCCHHHHHHHHh-CCCCceEEEeeC-CCCCeEEEeee---CCcceEEEEEEecCCeEEecC--CCcCCCHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLS-GRPDGTFLIRPS-TTGQYALSIVC---SGAPKHCLVYETERGFGFAEP--FNIYPSLG  175 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~-~~~~G~FLVR~S-~~g~y~LSvr~---~~~vkH~rI~~~~~g~~~~~~--~~~F~sL~  175 (196)
                      +..+|||| +|+|.+||++|. .+.+|+||||+| ..+.|+||||.   .+.||||||.+. +|.|||..  ...|+||.
T Consensus        12 l~~epWff~~isR~eAE~lL~~~~~~GaFLVR~Se~~~~ySLSVR~~~~~~~VKHYkI~~~-~G~y~I~~~~~~~F~SL~   90 (125)
T 3maz_A           12 LNPMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSV-GQNYTIELEKPVTLPNLF   90 (125)
T ss_dssp             CCCCCTTBCCCCHHHHHHHHHHCGGGCSEEEEECTTSSSEEEEEEECSSSCEEEEEEEEEE-TTEEEECSSSCEEESSHH
T ss_pred             ccCCCCCcCCCCHHHHHHHHhccCCCCcEEEEeCCCCCCEEEEEEecCCCCCEeeeEEEEe-CCEEEEecCCCcCcCCHH
Confidence            45689999 999999999886 457899999999 55599999998   578999999998 68888883  45799999


Q ss_pred             HHHHHHhhCCccccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l~  194 (196)
                      |||+||+++++++|.+++.
T Consensus        91 eLV~yY~~~adGl~~~L~~  109 (125)
T 3maz_A           91 SVIDYFVKETRGNLRPFIA  109 (125)
T ss_dssp             HHHHHHHHHTTTCCCBCCC
T ss_pred             HHHHHHHhCCCcCcccccc
Confidence            9999999999999998764

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.92  E-value=4.9e-25  Score=160.25  Aligned_cols=88  Identities=27%  Similarity=0.321  Sum_probs=80.2

Q ss_pred             ccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        107 KTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      ++||| .|+|++||++|+.  .++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|.|++.....|+||.|||+||
T Consensus         2 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y   81 (100)
T 1rja_A            2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYH   81 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHH
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHH
Confidence            68999 9999999999986  68999999999  6899999999999999999998777888888778999999999999


Q ss_pred             hhCCccccccccc
Q psy13388        182 AANSLEEHNDDLI  194 (196)
Q Consensus       182 ~~~~l~~~~~~l~  194 (196)
                      +.++++++..+..
T Consensus        82 ~~~~~~l~~~L~~   94 (100)
T 1rja_A           82 RAQSLSHGLRLAA   94 (100)
T ss_dssp             HHCCTTSSSCCCS
T ss_pred             hhCCCCCCCCCCc
Confidence            9999998776543

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.92  E-value=7.9e-25  Score=160.16  Aligned_cols=90  Identities=30%  Similarity=0.434  Sum_probs=80.6

Q ss_pred             cCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSL  174 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL  174 (196)
                      +.++||| .|+|++||++|..  .++|+||||+|  .+|.|+|||+.     ++.|+||+|.+.++|.|++.....|+||
T Consensus         2 ~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl   81 (105)
T 1lkk_A            2 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGL   81 (105)
T ss_dssp             CCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSH
T ss_pred             CcCceecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCH
Confidence            4579999 9999999999974  59999999999  68999999998     6889999999877788888777899999


Q ss_pred             HHHHHHHhhCCccccccccc
Q psy13388        175 GALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       175 ~dLI~hY~~~~l~~~~~~l~  194 (196)
                      .+||+||++++++++..+..
T Consensus        82 ~~LI~~y~~~~~~l~~~L~~  101 (105)
T 1lkk_A           82 HELVRHYTNASDGLCTRLSR  101 (105)
T ss_dssp             HHHHHHHHHCCTTSSSCCCS
T ss_pred             HHHHHHHhhCCCCCccCCcC
Confidence            99999999999999876644

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.92  E-value=9.5e-25  Score=161.28  Aligned_cols=92  Identities=25%  Similarity=0.359  Sum_probs=82.1

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeee------CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVC------SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~------~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .++.++||| .|+|++||++|+.. ++|+||||+| .++.|+|||+.      .+.|+||+|.+.++|.|++.....|+|
T Consensus         7 ~l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~s   86 (110)
T 2ekx_A            7 GLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDS   86 (110)
T ss_dssp             CTTTSSSBCCSCCHHHHHHHHHHTCCTTEEEEEECSSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSC
T ss_pred             cccCCCeecCCCCHHHHHHHHhccCCCceEEEEecCCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCC
Confidence            357789999 99999999999865 9999999999 99999999997      479999999988778888877689999


Q ss_pred             HHHHHHHHhhCCccccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l~  194 (196)
                      |.+||+||++++++++..+..
T Consensus        87 l~~LV~~y~~~~~~l~~~L~~  107 (110)
T 2ekx_A           87 IPKLIHYHQHNSAGMITRLRH  107 (110)
T ss_dssp             HHHHHHHHHHSCCSSSCCCCE
T ss_pred             HHHHHHHHeeCCCCCceecCc
Confidence            999999999999998876643

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.92  E-value=8.9e-25  Score=160.35  Aligned_cols=90  Identities=24%  Similarity=0.337  Sum_probs=82.3

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+. +|.|++.....|+||.+||+
T Consensus         4 ~L~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~-~g~~~l~~~~~F~sl~~Lv~   82 (106)
T 3eaz_A            4 KLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYH-ASKLSIDEEVYFENLMQLVE   82 (106)
T ss_dssp             TGGGCTTBCCSCCHHHHHHHTCSCCTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEE-TTEEESSSSSCBSSHHHHHH
T ss_pred             ccccCCCcCCCCCHHHHHHHhCCCCCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEec-CCEEEECCCCccCCHHHHHH
Confidence            467789999 999999999999889999999999  78999999999999999999875 57888887789999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||++++++++..+.
T Consensus        83 ~y~~~~~gl~~~L~   96 (106)
T 3eaz_A           83 HYTSDADGLCTRLI   96 (106)
T ss_dssp             HHHHCCTTSSSCCC
T ss_pred             HHhhCCCCCCeecC
Confidence            99999999987654

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.92  E-value=8e-25  Score=160.08  Aligned_cols=89  Identities=25%  Similarity=0.277  Sum_probs=79.9

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-----CCcCCCHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-----FNIYPSLG  175 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-----~~~F~sL~  175 (196)
                      +.++||| .|+|++||++|+. .++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|.|++..     ...|+||.
T Consensus         2 ~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~   81 (104)
T 1d4t_A            2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK   81 (104)
T ss_dssp             TTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHH
T ss_pred             CCCceEccCCCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCHH
Confidence            4579999 9999999999974 48999999999  78999999999999999999987788888873     57899999


Q ss_pred             HHHHHHhhCCcccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l  193 (196)
                      |||+||+.++++++..+.
T Consensus        82 ~LV~~y~~~~~~l~~~L~   99 (104)
T 1d4t_A           82 NLISAFQKPDQGIVIPLQ   99 (104)
T ss_dssp             HHHHHHTSSSSSSSSCCC
T ss_pred             HHHHHHhhCCCCCeEECC
Confidence            999999999998877654

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.92  E-value=8.3e-25  Score=162.37  Aligned_cols=92  Identities=28%  Similarity=0.436  Sum_probs=81.8

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee----CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC----SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~----~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .++.++||| .|+|++||++|+.  .++|+||||+|  .+|.|+|||+.    +++|+||+|.+.++|.|++.....|+|
T Consensus         8 ~l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~s   87 (114)
T 1blj_A            8 TLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPT   87 (114)
T ss_dssp             CSCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESS
T ss_pred             ccccCCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCC
Confidence            356789999 9999999999974  59999999999  68999999998    689999999988778888877789999


Q ss_pred             HHHHHHHHhhCCccccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l~  194 (196)
                      |.|||+||+.++++++..+..
T Consensus        88 l~~LV~~y~~~~~~l~~~L~~  108 (114)
T 1blj_A           88 LQALVQHYSKKGDGLCQKLTL  108 (114)
T ss_dssp             HHHHHHHHHHCCSSSSSCCCC
T ss_pred             HHHHHHHhhhCCCCCceecCc
Confidence            999999999999998876543

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.91  E-value=2.1e-24  Score=157.16  Aligned_cols=88  Identities=31%  Similarity=0.482  Sum_probs=80.0

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|.|++.+ ..|+||.+||+|
T Consensus         6 l~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV~~   84 (100)
T 1r1p_A            6 IEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT-EKFPSLNKLVDY   84 (100)
T ss_dssp             CTTTTTSCTTCCHHHHHHHHHTSCTTBEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSS-CEESSHHHHHHH
T ss_pred             eccCCccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeC-CEeCCHHHHHHH
Confidence            46679999 999999999999888999999999  68999999999999999999987778888875 799999999999


Q ss_pred             HhhCCccccccc
Q psy13388        181 YAANSLEEHNDD  192 (196)
Q Consensus       181 Y~~~~l~~~~~~  192 (196)
                      |+.+++......
T Consensus        85 y~~~~l~~~~~i   96 (100)
T 1r1p_A           85 YRTTSISKQKQV   96 (100)
T ss_dssp             HTTSCSSSSSCC
T ss_pred             HHhCCCCCCCce
Confidence            999999876643

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.91  E-value=1.2e-24  Score=167.75  Aligned_cols=90  Identities=23%  Similarity=0.171  Sum_probs=78.5

Q ss_pred             CcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC-C---CCCeEEEeeeCCcceEEEEEEecCCe-EEecC----CCcCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS-T---TGQYALSIVCSGAPKHCLVYETERGF-GFAEP----FNIYP  172 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S-~---~g~y~LSvr~~~~vkH~rI~~~~~g~-~~~~~----~~~F~  172 (196)
                      ++.++||| .|+|++||++|.. .++|+||||+| .   ++.|+|||+.+++|+||+|.+..+|. |++..    ...|.
T Consensus        20 l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~   99 (141)
T 2eo6_A           20 LLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFG   99 (141)
T ss_dssp             TTTCSSEEESCCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEETTEEEEEEECEETTTTEECSSSCCTTCCCBS
T ss_pred             cCCCCeEecCCCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEeCCCCEEEEccccCCCCccC
Confidence            56789999 9999999999964 68999999999 5   69999999999999999998766665 66652    47899


Q ss_pred             CHHHHHHHHhhCCcccccccc
Q psy13388        173 SLGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       173 sL~dLI~hY~~~~l~~~~~~l  193 (196)
                      ||.|||+||+++++++|+.+.
T Consensus       100 sl~eLV~~y~~~~~~l~~~~~  120 (141)
T 2eo6_A          100 SVVEIVNSHQHNPLVLIDSQN  120 (141)
T ss_dssp             SHHHHHHHHHHSCCCCCCSSS
T ss_pred             CHHHHHHHHhhCCccceeccc
Confidence            999999999999999987554

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.91  E-value=2.9e-24  Score=160.92  Aligned_cols=91  Identities=22%  Similarity=0.326  Sum_probs=81.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-----CCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-----FNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-----~~~F~s  173 (196)
                      .++.++||| .|+|++||++|+. .++|+||||+|  .+|.|+|||+..++|+||+|.+..+|.|++..     ...|.|
T Consensus         6 ~~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~s   85 (119)
T 2ysx_A            6 SGMVPCWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTK   85 (119)
T ss_dssp             SSCCCSSEEESCCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSS
T ss_pred             CCCCCccccCCCCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCC
Confidence            356689999 9999999999986 78999999999  68999999999999999999987778888875     368999


Q ss_pred             HHHHHHHHhhCCcccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l  193 (196)
                      |.+||+||+.++++++..+.
T Consensus        86 l~eLV~~y~~~~~~l~~~L~  105 (119)
T 2ysx_A           86 LDQLIEFYKKENMGLVTHLQ  105 (119)
T ss_dssp             HHHHHHHTTSSSSSSSSCCC
T ss_pred             HHHHHHHHhhCCCCCCeECC
Confidence            99999999999998876554

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=1.9e-24  Score=163.22  Aligned_cols=92  Identities=23%  Similarity=0.356  Sum_probs=81.9

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC-CCCCeEEEeee------CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS-TTGQYALSIVC------SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S-~~g~y~LSvr~------~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .++.++||| .|+|++||++|+. .++|+||||+| .++.|+|||+.      .+.|+||+|.+..+|.|++.....|.|
T Consensus        12 ~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~s   91 (125)
T 2dm0_A           12 NLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQS   91 (125)
T ss_dssp             CCTTSSSBCCSCCHHHHHHHHHHHCSTTCBCEEEETTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSS
T ss_pred             ccccCCcccCCCCHHHHHHHHhhcCCCCEEEEEecCCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCC
Confidence            467789999 9999999999975 38999999999 99999999998      468999999988778888877789999


Q ss_pred             HHHHHHHHhhCCccccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l~  194 (196)
                      |.+||+||++++++++..+..
T Consensus        92 l~eLV~~y~~~~~~l~~~L~~  112 (125)
T 2dm0_A           92 IPELIWYHQHNAAGLMTRLRY  112 (125)
T ss_dssp             HHHHHHHHTTCCCSSSCCCCS
T ss_pred             HHHHHHHhhhCCCCCccCCCC
Confidence            999999999999988776543

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.91  E-value=8.5e-24  Score=158.52  Aligned_cols=86  Identities=31%  Similarity=0.401  Sum_probs=76.7

Q ss_pred             CCCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEec-CCCcCCCHHHH
Q psy13388        102 PHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAE-PFNIYPSLGAL  177 (196)
Q Consensus       102 ~~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~-~~~~F~sL~dL  177 (196)
                      ..++.++||| .|+|++||++|+..++|+||||+|  .++ |+|||+.+++|+||+|.+.++|.|++. ....|.||.+|
T Consensus        11 ~~~~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eL   89 (119)
T 2cs0_A           11 AQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDAL   89 (119)
T ss_dssp             CSSSCCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHH
T ss_pred             ccccCCCccccCCCHHHHHHHhcCCCCCEEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHH
Confidence            3456789999 999999999999889999999999  556 999999999999999998877777775 46789999999


Q ss_pred             HHHHhhCCccc
Q psy13388        178 VLHYAANSLEE  188 (196)
Q Consensus       178 I~hY~~~~l~~  188 (196)
                      |+||+++++..
T Consensus        90 V~~y~~~~l~~  100 (119)
T 2cs0_A           90 VTFHQQKPIEP  100 (119)
T ss_dssp             HHHHTTSCCSS
T ss_pred             HHHHhhCcCCC
Confidence            99999999873

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.91  E-value=4.7e-24  Score=160.00  Aligned_cols=90  Identities=26%  Similarity=0.379  Sum_probs=80.5

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|++||++|+. .++|+||||+|  .+|.|+|||+..++|+||+|.+.++|.|++.. ..|.||.|||
T Consensus        12 ~l~~~~WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LI   90 (119)
T 2gsb_A           12 PHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGG-RYYNSIGDII   90 (119)
T ss_dssp             SGGGCSSBCCSSCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEESS-CCBSCHHHHH
T ss_pred             ccccCCcccCCCCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEECC-cccCCHHHHH
Confidence            467789999 9999999999985 47899999999  68999999999999999999988888888875 7899999999


Q ss_pred             HHHhhCCcccccccc
Q psy13388        179 LHYAANSLEEHNDDL  193 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l  193 (196)
                      +||+++++.++..+.
T Consensus        91 ~~y~~~~l~~~~~L~  105 (119)
T 2gsb_A           91 DHYRKEQIVEGYYLK  105 (119)
T ss_dssp             HHHTTSCSBTTBCCC
T ss_pred             HHHhhCccCCCCEeC
Confidence            999999998765543

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.91  E-value=2.3e-24  Score=161.58  Aligned_cols=90  Identities=21%  Similarity=0.177  Sum_probs=80.9

Q ss_pred             CCcCccccc-cCCHHHHHHHHh-CCCCceEEEeeC--CCCCeEEEeee----CCcceEEEEEEecCCeEEecCCCcC--C
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLS-GRPDGTFLIRPS--TTGQYALSIVC----SGAPKHCLVYETERGFGFAEPFNIY--P  172 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~-~~~~G~FLVR~S--~~g~y~LSvr~----~~~vkH~rI~~~~~g~~~~~~~~~F--~  172 (196)
                      .++.++||| .|+|++||++|. ..++|+||||+|  .+|.|+|||+.    ++.|+||+|.+ .+|.|++.....|  +
T Consensus        17 ~~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~-~~g~~~i~~~~~F~~~   95 (118)
T 2el8_A           17 RALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKR-EGPKYVIDVEQPFSCT   95 (118)
T ss_dssp             CCSSSCTTCCCCCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCC-BTTBCCBSSSSCCCCS
T ss_pred             cccCCCceecCCCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEE-cCCEEEEeCCCeECCC
Confidence            456789999 999999999996 358999999999  78999999999    89999999988 5677888777889  9


Q ss_pred             CHHHHHHHHhhCCcccccccc
Q psy13388        173 SLGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       173 sL~dLI~hY~~~~l~~~~~~l  193 (196)
                      ||.+||+||+++++++|..++
T Consensus        96 sL~eLV~~y~~~~~gl~~~L~  116 (118)
T 2el8_A           96 SLDAVVNYFVSHTKKALVPFL  116 (118)
T ss_dssp             SHHHHHHHHHHHSSSCCCBCC
T ss_pred             CHHHHHHHHhhCCCCCeEeee
Confidence            999999999999999998765

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.91  E-value=1.4e-24  Score=159.15  Aligned_cols=91  Identities=30%  Similarity=0.458  Sum_probs=81.0

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      ++.++||| .|+|++||++|+.  .++|+||||+|  .+|.|+|||+.     .+.|+||+|.+.++|.|++.....|+|
T Consensus         2 l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~s   81 (106)
T 1aot_F            2 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFET   81 (106)
T ss_dssp             CCSSSSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESS
T ss_pred             CccCccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCC
Confidence            46689999 9999999999974  58999999999  68999999996     789999999988778888877789999


Q ss_pred             HHHHHHHHhhCCccccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l~  194 (196)
                      |.+||+||+.++++++..+..
T Consensus        82 l~~LV~~y~~~~~~l~~~L~~  102 (106)
T 1aot_F           82 LQQLVQHYSERAAGLSSRLVV  102 (106)
T ss_dssp             HHHHHHHHTTCCTTSSSCSCS
T ss_pred             HHHHHHHhccCCCCCcEeecc
Confidence            999999999999999876643

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.90  E-value=5e-24  Score=155.46  Aligned_cols=87  Identities=24%  Similarity=0.326  Sum_probs=78.5

Q ss_pred             ccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-----CCcCCCHHHH
Q psy13388        107 KTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-----FNIYPSLGAL  177 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-----~~~F~sL~dL  177 (196)
                      ++||| .|+|++||++|.. .++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|.|++..     ...|+||.+|
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~L   82 (103)
T 1i3z_A            3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQEL   82 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHH
T ss_pred             CccccCCCCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHH
Confidence            58999 9999999999985 68999999999  78999999999999999999987788888873     5789999999


Q ss_pred             HHHHhhCCcccccccc
Q psy13388        178 VLHYAANSLEEHNDDL  193 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l  193 (196)
                      |+||++++.+++..+.
T Consensus        83 V~~y~~~~~~l~~~L~   98 (103)
T 1i3z_A           83 VSKYGKPGQGLVVHLS   98 (103)
T ss_dssp             HHHTTSSSSSSSSCCC
T ss_pred             HHHHhhCCCCCeEEcC
Confidence            9999999988877654

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.90  E-value=5.6e-24  Score=160.87  Aligned_cols=91  Identities=24%  Similarity=0.398  Sum_probs=81.7

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeee------CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVC------SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~------~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .++.++||| .|+|++||++|+.. ++|+||||+| .+|.|+|||+.      ++.|+||+|.+.++|.|++.....|+|
T Consensus         7 ~l~~~~WyhG~isR~eAe~lL~~~g~~G~FLVR~Ss~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~s   86 (125)
T 2ge9_A            7 SIEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFST   86 (125)
T ss_dssp             SSCCSSSEETTCCHHHHHHHHHHHTCTTEEEEEECSSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSS
T ss_pred             ccccCCccccCCCHHHHHHHHhhcCCCceEEEEecCCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCC
Confidence            467789999 99999999999864 8999999999 99999999997      478999999998888888877789999


Q ss_pred             HHHHHHHHhhCCcccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l  193 (196)
                      |.+||+||+.++++++..+.
T Consensus        87 l~eLV~~y~~~~~~l~~~L~  106 (125)
T 2ge9_A           87 IPELINYHQHNSAGLISRLK  106 (125)
T ss_dssp             HHHHHHHHHCCCTTCSCCSS
T ss_pred             HHHHHHHhhhCCCCCceeCC
Confidence            99999999999988876554

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.90  E-value=7.5e-24  Score=153.10  Aligned_cols=82  Identities=32%  Similarity=0.471  Sum_probs=75.3

Q ss_pred             ccccc-cCCHHHHHHHHhCCC-CceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHh
Q psy13388        107 KTWLV-RMSRAQAEALLSGRP-DGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYA  182 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~~~-~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~  182 (196)
                      ++||| .|+|++||++|+... +|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.. ..|+||.|||+||+
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV~~y~   81 (96)
T 1jyr_A            3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV-VKFNSLNELVDYHR   81 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS-CEESSHHHHHHHTT
T ss_pred             cceeccCCCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECC-cccCCHHHHHHHHh
Confidence            68999 999999999998754 999999999  78999999999999999999987778888886 79999999999999


Q ss_pred             hCCcccc
Q psy13388        183 ANSLEEH  189 (196)
Q Consensus       183 ~~~l~~~  189 (196)
                      .+++...
T Consensus        82 ~~~l~~~   88 (96)
T 1jyr_A           82 STSVSRN   88 (96)
T ss_dssp             SSCSCSS
T ss_pred             hCCCCCC
Confidence            9998754

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.90  E-value=8.6e-24  Score=162.49  Aligned_cols=84  Identities=33%  Similarity=0.509  Sum_probs=76.1

Q ss_pred             cCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      +.++||| .|+|++||++|+..++|+||||+|  .++.|+|||+.+++|+||+|+ ..+|.|++.....|.||.+||+||
T Consensus        24 ~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~-~~~g~~~l~~~~~F~sl~eLV~~y  102 (138)
T 2crh_A           24 SVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIM-TAEGLYRITEKKAFRGLTELVEFY  102 (138)
T ss_dssp             GGSSSBCCSCCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEETTEEEEEECE-EETTEEESSTTCCBSSHHHHHHHH
T ss_pred             CcCCcccCCCCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEECCeEEEEEEE-eCCCEEEECCCCccCCHHHHHHHH
Confidence            4469999 999999999999888999999999  679999999999999999995 567888888778999999999999


Q ss_pred             hhCCcccc
Q psy13388        182 AANSLEEH  189 (196)
Q Consensus       182 ~~~~l~~~  189 (196)
                      +++++...
T Consensus       103 ~~~~l~~~  110 (138)
T 2crh_A          103 QQNSLKDC  110 (138)
T ss_dssp             TTSCGGGT
T ss_pred             HhCccccc
Confidence            99997653

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.90  E-value=7.7e-24  Score=157.81  Aligned_cols=92  Identities=22%  Similarity=0.282  Sum_probs=81.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC-CCCCeEEEeeeC------CcceEEEEE--EecCCeEEecCCCcC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS-TTGQYALSIVCS------GAPKHCLVY--ETERGFGFAEPFNIY  171 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S-~~g~y~LSvr~~------~~vkH~rI~--~~~~g~~~~~~~~~F  171 (196)
                      .++.++||| .|+|++||++|+. .++|+||||+| .++.|+|||+..      +.|+||+|.  ...+|.|++.....|
T Consensus         5 ~l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F   84 (118)
T 3s9k_A            5 NLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVF   84 (118)
T ss_dssp             CGGGSTTBCTTCCHHHHHHHHHHHCCTTCEEEEECSSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCC
T ss_pred             ccccCceecCCCCHHHHHHHHHhcCCCCeEEEEeeCCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCccc
Confidence            357789999 9999999999975 47999999999 999999999996      899999994  456777888777899


Q ss_pred             CCHHHHHHHHhhCCccccccccc
Q psy13388        172 PSLGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       172 ~sL~dLI~hY~~~~l~~~~~~l~  194 (196)
                      +||.+||+||++++++++..+..
T Consensus        85 ~sl~~LV~~y~~~~~~l~~~L~~  107 (118)
T 3s9k_A           85 DSIPLLIQYHQYNGGGLVTRLRY  107 (118)
T ss_dssp             SCHHHHHHHHHHCCTTSSSCCCC
T ss_pred             CCHHHHHHHheeCCCCCccCCCC
Confidence            99999999999999988776654

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=9.4e-24  Score=158.07  Aligned_cols=86  Identities=30%  Similarity=0.438  Sum_probs=77.8

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .++.|+|||+.+++|+||+|.+. +|.|++.....|.||.+||+
T Consensus        12 ~l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~-~g~~~l~~~~~F~sl~~LV~   90 (118)
T 2dlz_A           12 DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEK-DNWIHITEAKKFDSLLELVE   90 (118)
T ss_dssp             CGGGSTTEEESCCHHHHHHHHHHSCTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEE-TTEEESTTSCCBSSHHHHHH
T ss_pred             ccccCCceecCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEc-CCEEEEeCCcccCCHHHHHH
Confidence            357789999 999999999998789999999999  68999999999999999999985 57788876689999999999


Q ss_pred             HHhhCCcccc
Q psy13388        180 HYAANSLEEH  189 (196)
Q Consensus       180 hY~~~~l~~~  189 (196)
                      ||+.+++...
T Consensus        91 ~y~~~~l~~~  100 (118)
T 2dlz_A           91 YYQCHSLKES  100 (118)
T ss_dssp             HHTTSCTTTT
T ss_pred             HHhhCccccc
Confidence            9999998554

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.90  E-value=5.4e-24  Score=161.52  Aligned_cols=90  Identities=24%  Similarity=0.272  Sum_probs=80.0

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-----CCcCCCHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-----FNIYPSLG  175 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-----~~~F~sL~  175 (196)
                      +.++||| .|+|++||++|.. .++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|.|++..     ...|+||.
T Consensus         2 ~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~   81 (128)
T 1ka6_A            2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK   81 (128)
T ss_dssp             CCCSSBCCSCCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHH
T ss_pred             CCCcccCCCCCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHH
Confidence            4579999 9999999999974 58999999999  78999999999999999999987778888873     57899999


Q ss_pred             HHHHHHhhCCccccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l~  194 (196)
                      +||+||++++++++..+..
T Consensus        82 ~LV~~y~~~~~gl~~~L~~  100 (128)
T 1ka6_A           82 NLISAFQKPDQGIVIPLQY  100 (128)
T ss_dssp             HHHHHTTSSCSSSSSCCCS
T ss_pred             HHHHHHhhCCCCCcEEcCC
Confidence            9999999999888766543

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.90  E-value=7.8e-24  Score=156.85  Aligned_cols=87  Identities=21%  Similarity=0.324  Sum_probs=77.2

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCC---CCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGR---PDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGA  176 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~---~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~d  176 (196)
                      .++.++||| .|+|++||++|+..   ++|+||||+|  .+|.|+|||+..++|+||+|.+..+|.|++. ...|+||.+
T Consensus         5 ~l~~~~WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~   83 (111)
T 2hdv_A            5 PLSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQ-HLHFQSIFD   83 (111)
T ss_dssp             CGGGSTTEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEET-TEEESSHHH
T ss_pred             ccccCCCcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeC-CceeCCHHH
Confidence            357789999 99999999999864   8999999999  7899999999999999999998777888887 489999999


Q ss_pred             HHHHHhhCCccccc
Q psy13388        177 LVLHYAANSLEEHN  190 (196)
Q Consensus       177 LI~hY~~~~l~~~~  190 (196)
                      ||+||+++++.+..
T Consensus        84 LV~~y~~~~l~~~~   97 (111)
T 2hdv_A           84 MLEHFRVHPIPLES   97 (111)
T ss_dssp             HHHHHTTSCCC---
T ss_pred             HHHHHhhCCccccc
Confidence            99999999998853

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.90  E-value=1.4e-23  Score=158.18  Aligned_cols=90  Identities=30%  Similarity=0.438  Sum_probs=79.2

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|...++|+||||+|  .+|.|+|||+..++|+||+|.+.+ +.|++.....|.||.+||+
T Consensus        18 ~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~-~~~~l~~~~~F~sl~eLV~   96 (122)
T 2lnw_A           18 DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKD-NWIHITEAKKFDSLLELVE   96 (122)
T ss_dssp             CSTTSTTBCCSCCHHHHHHHHHHSCTTBEEEEECCCSSEEEEEEEECSSCEEEEEEEEET-TEEESSSSCCBSSHHHHHH
T ss_pred             CcccCcCCCcCCCHHHHHHHhcCCCCCeEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcC-CEEEECCCCeECCHHHHHH
Confidence            467789999 999999999998788999999999  689999999999999999999765 5677776789999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+.+++......+
T Consensus        97 ~y~~~~l~~~~~~l  110 (122)
T 2lnw_A           97 YYQCHSLKESFKQL  110 (122)
T ss_dssp             HHHHSCGGGTCTTC
T ss_pred             HHhhCcCcccCCCc
Confidence            99999886654433

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.90  E-value=1.1e-23  Score=157.61  Aligned_cols=87  Identities=30%  Similarity=0.450  Sum_probs=78.8

Q ss_pred             CcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      ++.++||| .|+|++||++|+.. ++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.. ..|+||.+||+
T Consensus         3 L~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~-~~F~sl~eLV~   81 (117)
T 3ov1_A            3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV-VKFNSLNELVD   81 (117)
T ss_dssp             CCCCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS-CEESSHHHHHH
T ss_pred             cccCCcccCCCCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECC-CCcCCHHHHHH
Confidence            46689999 99999999999874 7899999999  78999999999999999999987788899887 79999999999


Q ss_pred             HHhhCCcccccc
Q psy13388        180 HYAANSLEEHND  191 (196)
Q Consensus       180 hY~~~~l~~~~~  191 (196)
                      ||+++++..+..
T Consensus        82 ~y~~~~l~~~~~   93 (117)
T 3ov1_A           82 YHRSTSVSRNQQ   93 (117)
T ss_dssp             HTTTSCSCSSSC
T ss_pred             HHhhCCCCCCCc
Confidence            999999976543

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.90  E-value=2.3e-24  Score=166.13  Aligned_cols=86  Identities=24%  Similarity=0.267  Sum_probs=77.4

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEec---CCCcCCCHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAE---PFNIYPSLGAL  177 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~---~~~~F~sL~dL  177 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .++.|+||++..++|+||+|.+. +|.|++.   ....|+||.+|
T Consensus        21 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~-~g~~~l~~~~~~~~F~sl~eL   99 (141)
T 2vif_A           21 LAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHS-NGRFSFYEQPDVEGHTSIVDL   99 (141)
T ss_dssp             HHHHTCBCCSCCHHHHHHHTTTSCTTCEEEEECSSTTCSEEEEEEETTEEEEEEEEEE-TTEEEETTCCSCCCBSSHHHH
T ss_pred             hccCCCcccCCCHHHHHHHhcCCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEEE-CCEEEEeecCCCCccCCHHHH
Confidence            56689999 999999999998888999999999  68999999999999999999987 6778887   57899999999


Q ss_pred             HHHHhhCCc-cccc
Q psy13388        178 VLHYAANSL-EEHN  190 (196)
Q Consensus       178 I~hY~~~~l-~~~~  190 (196)
                      |+||+++++ ++++
T Consensus       100 I~~y~~~~~~gl~c  113 (141)
T 2vif_A          100 IEHSIGDSENGAFC  113 (141)
T ss_dssp             HHHHHHHHHHTCCE
T ss_pred             HHHHhhCCCCCcce
Confidence            999999984 6643

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.90  E-value=1.4e-23  Score=156.40  Aligned_cols=90  Identities=27%  Similarity=0.329  Sum_probs=76.8

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEe-cCCe-EEe-c-CCCcCCCH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYET-ERGF-GFA-E-PFNIYPSL  174 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~-~~g~-~~~-~-~~~~F~sL  174 (196)
                      ++.++||| .|+|++||++|+.  +++|+||||+|  .+|.|+|||+.+++|+||+|.+. ++|. +|. . ....|+||
T Consensus        11 ~~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl   90 (117)
T 3pqz_A           11 HRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDL   90 (117)
T ss_dssp             GGGCTTBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSH
T ss_pred             cccCccccCCCCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCH
Confidence            56789999 9999999999974  67999999999  68999999999999999999986 4564 343 2 24789999


Q ss_pred             HHHHHHHhhCCcccccccc
Q psy13388        175 GALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       175 ~dLI~hY~~~~l~~~~~~l  193 (196)
                      .+||+||+.++++++..+.
T Consensus        91 ~~LV~~y~~~~~~l~~~L~  109 (117)
T 3pqz_A           91 LQLVEFHQLNRGILPCLLR  109 (117)
T ss_dssp             HHHHHHHHHCCTTSSSCCC
T ss_pred             HHHHHHHhhCCCCCcEECC
Confidence            9999999999999987654

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.90  E-value=2.9e-23  Score=156.75  Aligned_cols=90  Identities=31%  Similarity=0.445  Sum_probs=79.1

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|+.. .+|+||||+| .++.|+|||+.+++|+||+|.+. ++.|++.....|+||.|||+
T Consensus        15 ~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LV~   93 (124)
T 2eob_A           15 PHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRINRD-GRHFVLGTSAYFESLVELVS   93 (124)
T ss_dssp             STTTSTTEESSCCHHHHHHHHHHCCSSSEEEEECCTTSSCEEEEEEETTEEEEEEEEES-SSCEESSSSCCBSSHHHHHH
T ss_pred             ccCcCCCeecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCEEEEEEeCCeEEEEEEEEC-CCEEEECCCCcCCCHHHHHH
Confidence            356689999 99999999999865 7899999999 89999999999999999999874 56777876666999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+++++.++..+.
T Consensus        94 ~y~~~~~~~~~~L~  107 (124)
T 2eob_A           94 YYEKHALYRKMRLR  107 (124)
T ss_dssp             HHTTSCSSSSCCSC
T ss_pred             HHhhCCCCCCcCCC
Confidence            99999998866543

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.90  E-value=2.3e-23  Score=152.52  Aligned_cols=89  Identities=22%  Similarity=0.298  Sum_probs=75.0

Q ss_pred             cCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEec-CC--eEEec-CCCcCCCHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETE-RG--FGFAE-PFNIYPSLG  175 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~-~g--~~~~~-~~~~F~sL~  175 (196)
                      +.++||| .|+|++||++|..  +++|+||||+|  .+|.|+|||+.+++|+||+|.+.+ +|  +|.+. ....|+||.
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~   82 (105)
T 1nrv_A            3 RTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLI   82 (105)
T ss_dssp             TTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHH
T ss_pred             ccCcccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHH
Confidence            4579999 9999999999974  48999999999  689999999999999999998854 45  34454 347899999


Q ss_pred             HHHHHHhhCCcccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l  193 (196)
                      +||+||+.++++++..+.
T Consensus        83 ~LV~~y~~~~~~l~~~L~  100 (105)
T 1nrv_A           83 QLVDFYQLNKGVLPCKLK  100 (105)
T ss_dssp             HHHHHHTTCCTTSSSCCC
T ss_pred             HHHHHhhhCCCCCcEeCC
Confidence            999999999999877654

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.90  E-value=2.2e-23  Score=156.37  Aligned_cols=84  Identities=26%  Similarity=0.417  Sum_probs=76.5

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--C-CCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--T-TGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~-~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  . ++.|+|||+..++|+||+|.+. +|.|++.....|+||.+||+
T Consensus         8 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~-~g~~~l~~~~~F~sl~~LI~   86 (120)
T 2iug_A            8 LQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR-DGKYGFSDPLTFSSVVELIN   86 (120)
T ss_dssp             HHTCTTBCCSCCHHHHHHHHTTCCTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEE-TTEEESSSSCCBSSHHHHHH
T ss_pred             cccCCccccCCCHHHHHHHhcCCCCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEc-CCEEEECCCCccCCHHHHHH
Confidence            56689999 999999999999888999999999  4 7999999999999999999986 57787776689999999999


Q ss_pred             HHhhCCccc
Q psy13388        180 HYAANSLEE  188 (196)
Q Consensus       180 hY~~~~l~~  188 (196)
                      ||+.+++..
T Consensus        87 ~y~~~~~~~   95 (120)
T 2iug_A           87 HYRNESLAQ   95 (120)
T ss_dssp             HHHHSCGGG
T ss_pred             HHHhCcccc
Confidence            999999864

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.90  E-value=2.7e-23  Score=159.59  Aligned_cols=84  Identities=36%  Similarity=0.540  Sum_probs=75.4

Q ss_pred             CcCccccc-cC-CHHHHHHHHhC------CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecC-C--eEEecCCCc
Q psy13388        104 HDEKTWLV-RM-SRAQAEALLSG------RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETER-G--FGFAEPFNI  170 (196)
Q Consensus       104 l~~~~Wy~-~i-sR~eAe~lL~~------~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~-g--~~~~~~~~~  170 (196)
                      +..++||| .| +|++||++|+.      .++|+||||+|  .+|.|+|||+.+++|+||+|.+..+ |  .|++.....
T Consensus        19 ~~~~~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~   98 (138)
T 2dx0_A           19 HFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLT   98 (138)
T ss_dssp             TSCCTTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSC
T ss_pred             ccCCCcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCc
Confidence            46689999 99 89999999983      69999999999  6899999999999999999998754 4  688877789


Q ss_pred             CCCHHHHHHHHhhCCcc
Q psy13388        171 YPSLGALVLHYAANSLE  187 (196)
Q Consensus       171 F~sL~dLI~hY~~~~l~  187 (196)
                      |.||.+||+||+++++.
T Consensus        99 F~sl~eLI~~y~~~~l~  115 (138)
T 2dx0_A           99 FNSIYALIQHYREAHLR  115 (138)
T ss_dssp             BSSHHHHHHHTTTSCCC
T ss_pred             CCCHHHHHHHHhhCCCC
Confidence            99999999999999973

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.89  E-value=3.5e-23  Score=186.87  Aligned_cols=125  Identities=22%  Similarity=0.282  Sum_probs=107.2

Q ss_pred             CCCCCCcceec----CCccccccccCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCc
Q psy13388         32 GGRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEK  107 (196)
Q Consensus        32 ~~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~  107 (196)
                      .+++|+.+.+.    |.+||... ..|.+|+||.|||....                                  .++.+
T Consensus        61 s~~~gd~~~v~~~~~~~~w~~~~-~~~~~G~~P~~yv~~~~----------------------------------~le~~  105 (495)
T 1opk_A           61 SITKGEKLRVLGYNHNGEWCEAQ-TKNGQGWVPSNYITPVN----------------------------------SLEKH  105 (495)
T ss_dssp             CBCTTCEEEEEEECTTSSEEEEE-CSSCEEEEEGGGEEESS----------------------------------SGGGS
T ss_pred             CccCCCEEEEeecCCCCCceeee-ecCCcceeccccccccc----------------------------------cccch
Confidence            35678887764    56677644 45888999999998854                                  25668


Q ss_pred             cccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHhhC
Q psy13388        108 TWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAAN  184 (196)
Q Consensus       108 ~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~~~  184 (196)
                      +||| .|+|++||.+|+...+|+||||+|  .+|.|+|||+..++|+||+|.+..+|.+++.....|.++.+||+||+..
T Consensus       106 ~wyhg~i~r~~ae~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~~~~  185 (495)
T 1opk_A          106 SWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTV  185 (495)
T ss_dssp             TTEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTC
T ss_pred             hhhccCCCHHHHHHHhhCCCCceEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHHHHhhhhccc
Confidence            9999 999999999998788999999999  8899999999999999999998888888888778999999999999998


Q ss_pred             Ccccccc
Q psy13388        185 SLEEHND  191 (196)
Q Consensus       185 ~l~~~~~  191 (196)
                      +.+++..
T Consensus       186 ~~g~~~~  192 (495)
T 1opk_A          186 ADGLITT  192 (495)
T ss_dssp             CTTSSSC
T ss_pred             ccccchh
Confidence            8887654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=3.7e-23  Score=184.50  Aligned_cols=126  Identities=23%  Similarity=0.302  Sum_probs=106.3

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKT  108 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~  108 (196)
                      .+.|+...+.   |.+||.... ..|++|+||.|||++.+                                  .++.++
T Consensus        21 ~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~----------------------------------~le~~~   66 (452)
T 1fmk_A           21 FKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD----------------------------------SIQAEE   66 (452)
T ss_dssp             BCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETT----------------------------------SGGGST
T ss_pred             ccCCCEEEEeccCCCCceEEEEcCCCcccccCcccccccc----------------------------------cccccc
Confidence            3557777764   467886443 47999999999998844                                  246679


Q ss_pred             ccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        109 WLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      ||| .|+|++||++|+.  +++|+||||.|  .+|.|+|||+.     .+.|+||+|.+..+|.|++.....|.||.+||
T Consensus        67 w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li  146 (452)
T 1fmk_A           67 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  146 (452)
T ss_dssp             TEEETCCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHH
T ss_pred             cccCCccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHH
Confidence            999 9999999999974  57799999999  78999999997     56899999999888888988878999999999


Q ss_pred             HHHhhCCccccccc
Q psy13388        179 LHYAANSLEEHNDD  192 (196)
Q Consensus       179 ~hY~~~~l~~~~~~  192 (196)
                      +||+++++++|..+
T Consensus       147 ~~y~~~~~~l~~~l  160 (452)
T 1fmk_A          147 AYYSKHADGLCHRL  160 (452)
T ss_dssp             HHHTTCCTTSSSCC
T ss_pred             HHhhhccccchhhc
Confidence            99999999988754

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.89  E-value=4.6e-23  Score=151.86  Aligned_cols=85  Identities=28%  Similarity=0.425  Sum_probs=72.6

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      +++.++||| .|+|++||++|+. .++|+||||+|  .+|.|+|||+..++|+||+|... ++.|.+.....|+||.+||
T Consensus         3 ~l~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LV   81 (109)
T 3tkz_A            3 HMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNT-GDYYDLYGGEKFATLAELV   81 (109)
T ss_dssp             ----CCSBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEEC-SSCEESSSSCCBSSHHHHH
T ss_pred             ccccCCceecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEeC-CCEEEecCCcccCCHHHHH
Confidence            457789999 9999999999985 48999999999  88999999999999999999874 4667676668899999999


Q ss_pred             HHHhhCCccc
Q psy13388        179 LHYAANSLEE  188 (196)
Q Consensus       179 ~hY~~~~l~~  188 (196)
                      +||+++++.+
T Consensus        82 ~~y~~~~~~l   91 (109)
T 3tkz_A           82 QYYMEHHGQL   91 (109)
T ss_dssp             HHHHHSTTSE
T ss_pred             HHHHhCcCcc
Confidence            9999998654

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.89  E-value=2.7e-23  Score=158.42  Aligned_cols=90  Identities=30%  Similarity=0.371  Sum_probs=79.7

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeC---------------CcceEEEEEEecCCeEEe
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCS---------------GAPKHCLVYETERGFGFA  165 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~---------------~~vkH~rI~~~~~g~~~~  165 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+..               +.|+||+|.+.++| |++
T Consensus        17 ~~~~~Wyhg~isR~eAe~lL~~~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g-~~l   95 (131)
T 2kno_A           17 DTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKG-VKI   95 (131)
T ss_dssp             CCHHHHBCTTCCHHHHHHHHTTSCTTBEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSC-CCE
T ss_pred             cccCCceecCCCHHHHHHHhcCCCCCeEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCC-CEE
Confidence            46679999 999999999998889999999999  789999999986               38999999987777 555


Q ss_pred             ---cCCCcCCCHHHHHHHHhhCCccccccccc
Q psy13388        166 ---EPFNIYPSLGALVLHYAANSLEEHNDDLI  194 (196)
Q Consensus       166 ---~~~~~F~sL~dLI~hY~~~~l~~~~~~l~  194 (196)
                         .....|+||.+||+||+.+++++++.+..
T Consensus        96 ~g~~~~~~F~SL~eLV~~y~~~~~~L~~~L~~  127 (131)
T 2kno_A           96 KGCPSEPYFGSLSALVSQHSISPISLPCCLRI  127 (131)
T ss_dssp             ETCSSCCCCCSHHHHHHTTTTCCSSCSSCCBC
T ss_pred             ecCCCCCccCCHHHHHHHHhhCCCCCCeECCC
Confidence               35578999999999999999999987754

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.89  E-value=3.6e-23  Score=151.00  Aligned_cols=83  Identities=27%  Similarity=0.390  Sum_probs=73.4

Q ss_pred             cCccccc-cCCHHHHHHHHh-CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS-GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~-~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      +.++||| .|+|++||++|+ ..++|+||||+|  .+|.|+|||+..++|+||+|.. .+|.|++.. ..|+||.+||+|
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~-~~g~~~l~~-~~F~sl~~LV~~   80 (102)
T 2cia_A            3 LGSEWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQL-VDNVYCIGQ-RRFHTMDELVEH   80 (102)
T ss_dssp             --CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECCSSSCEEEEEEE-ETTEEEETT-EEESSHHHHHHH
T ss_pred             cCCccccCCCCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEeCCeeEEEEEEe-cCCEEEECC-cCcCCHHHHHHH
Confidence            4479999 999999999995 568999999999  6899999999999999999984 567888876 799999999999


Q ss_pred             HhhCCcccc
Q psy13388        181 YAANSLEEH  189 (196)
Q Consensus       181 Y~~~~l~~~  189 (196)
                      |+++++...
T Consensus        81 y~~~~l~~~   89 (102)
T 2cia_A           81 YKKAPIFTS   89 (102)
T ss_dssp             HHHSCSEEC
T ss_pred             HhhCccccC
Confidence            999998653

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.89  E-value=8.6e-23  Score=154.68  Aligned_cols=90  Identities=26%  Similarity=0.355  Sum_probs=78.0

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEe-cCCeEEe--c-CCCcCCCH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYET-ERGFGFA--E-PFNIYPSL  174 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~-~~g~~~~--~-~~~~F~sL  174 (196)
                      ++.++||| .|+|++||++|+.  +++|+||||+|  .+|.|+|||+.+++|+||+|.+. ++|.|++  . ....|+||
T Consensus        23 l~~~~WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL  102 (126)
T 2aug_A           23 HRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDL  102 (126)
T ss_dssp             GGGSTTEETTCCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSH
T ss_pred             cccCCcccCCCCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCH
Confidence            56689999 9999999999985  47999999999  68999999999999999999885 3676544  3 34789999


Q ss_pred             HHHHHHHhhCCcccccccc
Q psy13388        175 GALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       175 ~dLI~hY~~~~l~~~~~~l  193 (196)
                      .+||+||+.++++++..+.
T Consensus       103 ~eLV~~y~~~~~~l~~~L~  121 (126)
T 2aug_A          103 IQLVEFYQLNKGVLPCKLK  121 (126)
T ss_dssp             HHHHHHHTTCCTTSSSCCC
T ss_pred             HHHHHHHhhCCCCCceecC
Confidence            9999999999999887654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=6.5e-23  Score=186.87  Aligned_cols=127  Identities=23%  Similarity=0.297  Sum_probs=105.5

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKT  108 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~  108 (196)
                      .+.|+...+.   |.+||.... ..|++|+||.|||+..+                                  .++.++
T Consensus       104 ~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~----------------------------------~l~~~~  149 (535)
T 2h8h_A          104 FKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD----------------------------------SIQAEE  149 (535)
T ss_dssp             BCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETT----------------------------------SGGGST
T ss_pred             cCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccc----------------------------------cccccc
Confidence            4667777654   567886544 37999999999998844                                  245679


Q ss_pred             ccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        109 WLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      ||| .|+|++||++|+.  +.+|+||||.|  .+|.|+|||+.     .+.|+||+|.+.++|.|++.....|.+|.+||
T Consensus       150 wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv  229 (535)
T 2h8h_A          150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV  229 (535)
T ss_dssp             TBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHH
T ss_pred             eeccccCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhh
Confidence            999 9999999999974  57899999999  78999999996     56899999998777888888778899999999


Q ss_pred             HHHhhCCcccccccc
Q psy13388        179 LHYAANSLEEHNDDL  193 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l  193 (196)
                      +||+++.+++|..+.
T Consensus       230 ~~y~~~~~~~~~~l~  244 (535)
T 2h8h_A          230 AYYSKHADGLCHRLT  244 (535)
T ss_dssp             HHHHHCCTTSSSCCC
T ss_pred             eeeccccCccccccc
Confidence            999999999887543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.88  E-value=1.5e-22  Score=180.41  Aligned_cols=132  Identities=22%  Similarity=0.284  Sum_probs=108.1

Q ss_pred             CCCCCccee----cCCccccccccCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcc
Q psy13388         33 GRLGPGYSI----ADPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKT  108 (196)
Q Consensus        33 ~~~~~~~~~----~dp~~~~~~~~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~  108 (196)
                      .+.|+...+    .|++||......|++|+||+|||++.+.               .++             .+.++.++
T Consensus        30 ~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~---------------~~~-------------~~~~~~~~   81 (450)
T 1k9a_A           30 FCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG---------------VKA-------------GTKLSLMP   81 (450)
T ss_dssp             BCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC---------------CCC-------------CTTEESCT
T ss_pred             CCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccc---------------ccc-------------cccccccc
Confidence            466777765    3567887666679999999999998541               000             12356789


Q ss_pred             ccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHhhCC
Q psy13388        109 WLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANS  185 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~~~~  185 (196)
                      ||| .|+|++||++|+...+|+||||+|  .+|.|+|||+..+.++||+|... ++.+++.....|.+|.+||+||+.+.
T Consensus        82 wyhg~i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~-~~~~~i~~~~~F~sl~eLv~~y~~~~  160 (450)
T 1k9a_A           82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYH-ASKLSIDEEVYFENLMQLVEHYTTDA  160 (450)
T ss_dssp             TBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEE-TTEEESSSSSCBSSHHHHHHHHHHCC
T ss_pred             ccccCcCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeCCeeeEEEEEec-CCceEeccccccccHHHHHhhhcccc
Confidence            999 999999999998778899999999  78999999999999999999664 56677777789999999999999999


Q ss_pred             cccccccc
Q psy13388        186 LEEHNDDL  193 (196)
Q Consensus       186 l~~~~~~l  193 (196)
                      .++|..++
T Consensus       161 ~~~~~~l~  168 (450)
T 1k9a_A          161 DGLCTRLI  168 (450)
T ss_dssp             TTSSSCCC
T ss_pred             cchhhhcc
Confidence            88876543

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.88  E-value=5.8e-23  Score=152.95  Aligned_cols=81  Identities=27%  Similarity=0.467  Sum_probs=71.2

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      ++.++||| .|+|++||++|+  ++|+||||+| ....|+|||+.+++|+||+|... +|.|++.. ..|+||.+||+||
T Consensus        13 l~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~~y~LSv~~~~~v~H~~I~~~-~g~~~~~~-~~F~sl~~LV~~y   88 (114)
T 1wqu_A           13 LHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSL-DNLYRLEG-EGFPSIPLLIDHL   88 (114)
T ss_dssp             GGGCTTEEESCCHHHHHTTCC--STTEEEEEECSSSCCEEEEEEETTEEEEEECEEC-SSSEESSS-CCBSSHHHHHHHH
T ss_pred             cccCCcEeeCCCHHHHHHHhc--cCCeEEEEEcCCCCCEEEEEEECCEEEEEEEEec-CCEEEECC-CCCCCHHHHHHHH
Confidence            46679999 999999999998  6999999999 44499999999999999999875 46777764 8999999999999


Q ss_pred             hhCCccc
Q psy13388        182 AANSLEE  188 (196)
Q Consensus       182 ~~~~l~~  188 (196)
                      +.+.+.+
T Consensus        89 ~~~~~~~   95 (114)
T 1wqu_A           89 LSTQQPL   95 (114)
T ss_dssp             HHHCCCS
T ss_pred             HHCCCCc
Confidence            9987765

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.88  E-value=1.1e-22  Score=174.43  Aligned_cols=90  Identities=58%  Similarity=1.047  Sum_probs=79.3

Q ss_pred             CCCCCCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHH
Q psy13388         99 RDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGA  176 (196)
Q Consensus        99 ~~l~~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~d  176 (196)
                      ++++.+..++||| .|+|.+||.+|.+.++|+||||.| .+|.|+|||+..+.|+||+|.+.++|++++.....|+||.+
T Consensus       186 ~~~~~l~~~~WyhG~IsR~eAE~lL~~~~~GtFLVR~Ss~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F~SL~e  265 (302)
T 2y3a_B          186 DALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKE  265 (302)
T ss_dssp             --CGGGSSTTTBCCSCCHHHHHHHHTTSCTTBEEBCCCSSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCCSSHHH
T ss_pred             cccccccCCCccCCCCCHHHHHHHhcCCCCCcEEEEeccCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCCCCHHH
Confidence            3445678889999 999999999998889999999999 99999999999999999999998877666665578999999


Q ss_pred             HHHHHhhCCccc
Q psy13388        177 LVLHYAANSLEE  188 (196)
Q Consensus       177 LI~hY~~~~l~~  188 (196)
                      ||+||+.+++..
T Consensus       266 LV~~Y~~~~L~~  277 (302)
T 2y3a_B          266 LVLHYQHASLVQ  277 (302)
T ss_dssp             HHHTTSSSCSTT
T ss_pred             HHHHHHhCCccc
Confidence            999999987654

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.88  E-value=1.6e-22  Score=149.20  Aligned_cols=80  Identities=31%  Similarity=0.477  Sum_probs=72.1

Q ss_pred             cccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecC-----------------CeEEecC
Q psy13388        108 TWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETER-----------------GFGFAEP  167 (196)
Q Consensus       108 ~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~-----------------g~~~~~~  167 (196)
                      +||| .|+|++||++|+..++|+||||+|  .+|.|+|||+.+++|+||+|.+.++                 +.|++. 
T Consensus         1 ~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~-   79 (109)
T 1ju5_A            1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG-   79 (109)
T ss_dssp             CCEETTCCHHHHHHHHTTCCTTEEEEEECSSSTTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEET-
T ss_pred             CccccCCCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccEEEeC-
Confidence            5999 999999999999889999999999  6899999999999999999988653                 357775 


Q ss_pred             CCcCCCHHHHHHHHhhCCccc
Q psy13388        168 FNIYPSLGALVLHYAANSLEE  188 (196)
Q Consensus       168 ~~~F~sL~dLI~hY~~~~l~~  188 (196)
                      ...|+||.+||+||+++++..
T Consensus        80 ~~~F~sl~~LV~~y~~~~l~~  100 (109)
T 1ju5_A           80 DQEFDSLPALLEFYKIHYLDT  100 (109)
T ss_dssp             TEEESSHHHHHHHHHHSCSSS
T ss_pred             CcccCCHHHHHHHHhhCCCCC
Confidence            588999999999999999873

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.88  E-value=2.3e-22  Score=150.35  Aligned_cols=83  Identities=24%  Similarity=0.375  Sum_probs=73.8

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .+..++||| .|+|++||++|+  ++|+||||+|  .+|.|+|||+.+++|+||+|.. .+|.|++. ...|+||.|||+
T Consensus        13 ~~~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~-~~g~y~~~-~~~F~sl~eLV~   88 (116)
T 2kk6_A           13 PLAEQDWYHGAIPRIEAQELLK--KQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQY-VDNMYRFE-GTGFSNIPQLID   88 (116)
T ss_dssp             CTTTCTTEEESCCHHHHHHTCC--STTCEEEEECTTCTTCEEEEEEETTEEEEEEEEE-ETTEEESS-SCEESCHHHHHH
T ss_pred             ccccCCCccCCCCHHHHHHHhc--cCCcEEEEECCCCCCcEEEEEEECCeEEEEEEEe-cCCEEEEC-CCEeCCHHHHHH
Confidence            356689999 999999999998  7999999999  6899999999999999999996 45777776 489999999999


Q ss_pred             HHhhCCcccc
Q psy13388        180 HYAANSLEEH  189 (196)
Q Consensus       180 hY~~~~l~~~  189 (196)
                      ||+.+++.++
T Consensus        89 ~y~~~~~~i~   98 (116)
T 2kk6_A           89 HHYTTKQVIT   98 (116)
T ss_dssp             HHHHTTCCSC
T ss_pred             HHhhCCCCcc
Confidence            9999987653

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.87  E-value=8.6e-23  Score=149.50  Aligned_cols=82  Identities=35%  Similarity=0.507  Sum_probs=73.3

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|+  ++|+||||+|  .+|.|+|||+.+++|+||+|. ..+|.|++. ...|+||.+||+|
T Consensus         4 l~~~~Wyhg~isR~~Ae~lL~--~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~-~~~g~~~~~-~~~F~sl~~LI~~   79 (104)
T 1mil_A            4 LRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLV-DPEGVVRTK-DHRFESVSHLISY   79 (104)
T ss_dssp             TTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEB-CTTSSEECS-SCEESSHHHHHHH
T ss_pred             cccCCcCCCCCCHHHHHHHhc--cCCcEEEEeCCCCCCCEEEEEEECCEEEEEEEE-eCCCEEEEC-CceeCCHHHHHHH
Confidence            56789999 999999999998  7999999999  689999999999999999996 456777776 4899999999999


Q ss_pred             HhhCCcccc
Q psy13388        181 YAANSLEEH  189 (196)
Q Consensus       181 Y~~~~l~~~  189 (196)
                      |+.+++.+.
T Consensus        80 y~~~~~p~~   88 (104)
T 1mil_A           80 HMDNHLPII   88 (104)
T ss_dssp             HHHHTCCEE
T ss_pred             HhhCCCccc
Confidence            999987543

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.87  E-value=5.5e-23  Score=169.97  Aligned_cols=83  Identities=30%  Similarity=0.474  Sum_probs=73.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecC-----------------CeE
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETER-----------------GFG  163 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~-----------------g~~  163 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+..++|+||+|.+.++                 +.|
T Consensus        10 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~   89 (230)
T 2dvj_A           10 EERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRL   89 (230)
T ss_dssp             SSSSSSCCSSCCTTHHHHHHTTSSSSCBEEECCSSCTTSCEEECCCSSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCE
T ss_pred             ccCCCcccCCCCHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCCcccccccccccccccceEE
Confidence            35579999 999999999998889999999999  7899999999999999999987653                 356


Q ss_pred             EecCCCcCCCHHHHHHHHhhCCcc
Q psy13388        164 FAEPFNIYPSLGALVLHYAANSLE  187 (196)
Q Consensus       164 ~~~~~~~F~sL~dLI~hY~~~~l~  187 (196)
                      ++. ...|.||.+||+||+++++.
T Consensus        90 ~~~-~~~F~sl~~LV~~y~~~~l~  112 (230)
T 2dvj_A           90 RIG-DQEFDSLPALLEFYKIHYLD  112 (230)
T ss_dssp             ESS-SCEESSHHHHHTTSTTTCSS
T ss_pred             EeC-CceeCCHHHHHHHHhhCccc
Confidence            765 58899999999999999876

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.87  E-value=1.8e-22  Score=157.53  Aligned_cols=83  Identities=27%  Similarity=0.325  Sum_probs=74.8

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCC-------CcCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF-------NIYP  172 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~-------~~F~  172 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .++.|+|||+..++|+||+|.+ .+|.|++...       ..|+
T Consensus        30 ~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~-~~g~f~l~~~~~~~~~~~~F~  108 (152)
T 2hmh_A           30 KLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQX-EGGSFSLQSDPRSTQPVPRFD  108 (152)
T ss_dssp             HHHHTSSEETTCCHHHHHHHHHTSCTTEEEEEECCSTTCSEEEEEEETTEEEEEEEEC-GGGCBEECBCTTCSSCCCCBS
T ss_pred             hhccCCCcCCCCCHHHHHHHhcCCCCCcEEEEeCCCCCCcEEEEEEcCCceEEEEEEe-cCCEEEEecccccccccCccC
Confidence            356689999 999999999999889999999999  6899999999999999999998 5677777764       7899


Q ss_pred             CHHHHHHHHhhCCc
Q psy13388        173 SLGALVLHYAANSL  186 (196)
Q Consensus       173 sL~dLI~hY~~~~l  186 (196)
                      ||.+||+||+.++.
T Consensus       109 SL~eLV~~Y~~~~~  122 (152)
T 2hmh_A          109 XVLKLVHHYMPPQA  122 (152)
T ss_dssp             SHHHHHHHTCCCCC
T ss_pred             CHHHHHHHHhhCcc
Confidence            99999999999974

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.87  E-value=1.1e-21  Score=159.77  Aligned_cols=117  Identities=26%  Similarity=0.369  Sum_probs=98.3

Q ss_pred             CCCCcceec----CCccccccccCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCccc
Q psy13388         34 RLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTW  109 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~W  109 (196)
                      +.|+...+.    |++||... ..|++|+||.|||....                                      ++|
T Consensus        20 ~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~~P~~yv~~~~--------------------------------------~~w   60 (217)
T 1gri_A           20 KRGDILKVLNEECDQNWYKAE-LNGKDGFIPKNYIEMKP--------------------------------------HPW   60 (217)
T ss_dssp             CTTCEEEC------CCEEEEE-SSSCEEEEEGGGEECCC--------------------------------------CSS
T ss_pred             CCCCEEEEEeccCCCCeEeec-cCCccceECCccccccc--------------------------------------chh
Confidence            446665543    45677644 57999999999997532                                      589


Q ss_pred             cc-cCCHHHHHHHHh-CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHhhCC
Q psy13388        110 LV-RMSRAQAEALLS-GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANS  185 (196)
Q Consensus       110 y~-~isR~eAe~lL~-~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~~~~  185 (196)
                      || .|+|.+||.+|. ..++|+||||.|  .+|.|+||++..+.|+||+|.+..+|.|++. ...|.||.+||+||++++
T Consensus        61 ~~g~isr~~ae~lL~~~~~~G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~-~~~f~sl~eLv~~~~~~~  139 (217)
T 1gri_A           61 FFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLW-VVKFNSLNELVDYHRSTS  139 (217)
T ss_dssp             BCTTCCHHHHHHHHHTCSSTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESS-SCEESSHHHHHHHHHHSC
T ss_pred             hcccCCHHHHHHHHhccCCCceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEe-eeEcCCHHHHHHhhhccc
Confidence            99 999999999994 579999999999  8999999999999999999999888888887 478999999999999998


Q ss_pred             ccccc
Q psy13388        186 LEEHN  190 (196)
Q Consensus       186 l~~~~  190 (196)
                      +....
T Consensus       140 ~~~~~  144 (217)
T 1gri_A          140 VSRNQ  144 (217)
T ss_dssp             SSSST
T ss_pred             ccccc
Confidence            87643

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.87  E-value=1.8e-22  Score=159.39  Aligned_cols=84  Identities=26%  Similarity=0.289  Sum_probs=76.3

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCC-------CcCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF-------NIYPS  173 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~-------~~F~s  173 (196)
                      ++.++||| .|+|++||++|+..++|+||||+|  .++.|+|||+..++|+||+|.. .+|.|++...       ..|+|
T Consensus        20 L~~~~WyhG~IsR~eAe~lL~~~~~GtFLVR~S~s~~g~y~LSvr~~~~v~H~rI~~-~~g~f~l~~~~~~~~~~~~F~S   98 (164)
T 2bbu_A           20 LQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQC-EGGSFSLQSDPRSTQPVPRFDC   98 (164)
T ss_dssp             HHHTSCCCTTSCHHHHHHHHHHSSTTCCEEEECSTTSCCEEEEECCTTCCEEEECEE-ETTEEESSSCCCCCSSCTTCCH
T ss_pred             hccCCccCCCCCHHHHHHHhcCCCCCCEEEEECCCCCCCEEEEEEECCceEEEEEEe-CCCeEEEecCcccccCCCccCC
Confidence            56689999 999999999998889999999999  7899999999999999999997 5678888764       78999


Q ss_pred             HHHHHHHHhhCCccc
Q psy13388        174 LGALVLHYAANSLEE  188 (196)
Q Consensus       174 L~dLI~hY~~~~l~~  188 (196)
                      |.+||+||+++++..
T Consensus        99 L~eLV~~Y~~~~~~~  113 (164)
T 2bbu_A           99 VLKLVHHYMPPPGTP  113 (164)
T ss_dssp             HHHHHHHHSCCCSCS
T ss_pred             HHHHHHHHhhCCCCC
Confidence            999999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.87  E-value=7.3e-22  Score=176.02  Aligned_cols=126  Identities=23%  Similarity=0.307  Sum_probs=105.6

Q ss_pred             CCCCCcceec--CCcccccc-ccCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCccc
Q psy13388         33 GRLGPGYSIA--DPGVASRG-LSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTW  109 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~-~~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~W  109 (196)
                      .++|+...+.  +.+||... ...|++|+||.|||...+                                  .++.++|
T Consensus        27 ~~~gd~~~v~~~~~~W~~~~~~~~g~~G~~P~~yv~~~~----------------------------------~le~~~W   72 (454)
T 1qcf_A           27 FQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD----------------------------------SLETEEW   72 (454)
T ss_dssp             BCTTCEEEEEECCTTEEEEEETTTCCEEEEEGGGEEETT----------------------------------CGGGSTT
T ss_pred             ccCCCEEEEEecCCCCeEEEECCCCceEEecchhccccc----------------------------------ccccccc
Confidence            3557776643  35687644 367999999999998744                                  3566899


Q ss_pred             cc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        110 LV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       110 y~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      || .|+|++||++|..  +.+|+||||+|  .+|.|+|||+.     .+.++||+|...++|.|++.....|.++.+||+
T Consensus        73 ~~g~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv~  152 (454)
T 1qcf_A           73 FFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVD  152 (454)
T ss_dssp             EETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHH
T ss_pred             cccccchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHHH
Confidence            99 9999999999963  78999999999  89999999998     678999999988888889888789999999999


Q ss_pred             HHhhCCccccccc
Q psy13388        180 HYAANSLEEHNDD  192 (196)
Q Consensus       180 hY~~~~l~~~~~~  192 (196)
                      ||++...++|...
T Consensus       153 ~y~~~~~~l~~~~  165 (454)
T 1qcf_A          153 HYKKGNDGLCQKL  165 (454)
T ss_dssp             HHTSSCTTSSSCC
T ss_pred             HHHhccCCccccc
Confidence            9999888887643

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.86  E-value=1.1e-21  Score=155.40  Aligned_cols=83  Identities=23%  Similarity=0.309  Sum_probs=74.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCC-------CcCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF-------NIYPS  173 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~-------~~F~s  173 (196)
                      ++.++||| .|+|++||++|++.++|+||||+|  .++.|+|||+..++|+||+|... +|.|++...       ..|+|
T Consensus        14 l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~-~g~~~l~~~~~~~~~~~~F~s   92 (169)
T 2c9w_A           14 LGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQ-DGKFRLDSIICVKSKLKQFDS   92 (169)
T ss_dssp             HHHTSCBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEE-TTEEEECTTTTTGGGCCCBSC
T ss_pred             cccCCccccCCCHHHHHHHcCCCCCcEEEEecCCCCCCeEEEEEEECCeeEEEEEEEe-CCEEEEccccCccccCCCCCC
Confidence            46679999 999999999999889999999999  78999999999999999999985 677888764       78999


Q ss_pred             HHHHHHHHhhCCcc
Q psy13388        174 LGALVLHYAANSLE  187 (196)
Q Consensus       174 L~dLI~hY~~~~l~  187 (196)
                      |.+||+||++++++
T Consensus        93 l~eLI~~y~~~~~~  106 (169)
T 2c9w_A           93 VVHLIDYYVQMCKD  106 (169)
T ss_dssp             HHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHhCcCC
Confidence            99999999998875

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.86  E-value=2.8e-21  Score=161.91  Aligned_cols=90  Identities=23%  Similarity=0.210  Sum_probs=80.9

Q ss_pred             cCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      +.++||| .|+|++||++|+  +.++|+||||+|  .+|.|+|||+.++.|+||+|.+.++|.|++.....|+||.+||+
T Consensus         4 ~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   83 (254)
T 2oq1_A            4 AHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE   83 (254)
T ss_dssp             TTCTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             ccCCccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHH
Confidence            4579999 999999999995  469999999999  77999999999999999999987778888876789999999999


Q ss_pred             HHhhCCccccccccc
Q psy13388        180 HYAANSLEEHNDDLI  194 (196)
Q Consensus       180 hY~~~~l~~~~~~l~  194 (196)
                      ||+.++++++..+..
T Consensus        84 ~y~~~~~~l~~~L~~   98 (254)
T 2oq1_A           84 FYSRDPDGLPCNLRK   98 (254)
T ss_dssp             HHHHCCTTSSSCCCS
T ss_pred             HHHhCCCCccccccc
Confidence            999999998876543

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.86  E-value=2e-21  Score=162.76  Aligned_cols=92  Identities=25%  Similarity=0.316  Sum_probs=83.5

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|++||++|+.  +++|+||||+| .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||
T Consensus       155 ~l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV  234 (254)
T 2oq1_A          155 AHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV  234 (254)
T ss_dssp             GGGGSTTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHH
T ss_pred             ccCCCcccccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHH
Confidence            356789999 9999999999985  49999999999 9999999999999999999998888889988778999999999


Q ss_pred             HHHhhCCccccccccc
Q psy13388        179 LHYAANSLEEHNDDLI  194 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l~  194 (196)
                      +||++++++++..+..
T Consensus       235 ~~y~~~~~~l~~~L~~  250 (254)
T 2oq1_A          235 EYLKLKADGLIYCLKE  250 (254)
T ss_dssp             HHHHHCCTTSSSCCCS
T ss_pred             HHHHhCCCCCCeeCCc
Confidence            9999999999876543

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.86  E-value=2.3e-21  Score=162.37  Aligned_cols=92  Identities=24%  Similarity=0.370  Sum_probs=83.4

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|++||++|+.  +++|+||||+| .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||
T Consensus       154 ~~~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV  233 (254)
T 1a81_A          154 AHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  233 (254)
T ss_dssp             SGGGSTTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHH
T ss_pred             ccccCCccccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHH
Confidence            456789999 9999999999985  48999999999 9999999999999999999998878889987678999999999


Q ss_pred             HHHhhCCccccccccc
Q psy13388        179 LHYAANSLEEHNDDLI  194 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l~  194 (196)
                      +||++++++++..+..
T Consensus       234 ~~y~~~~~~l~~~L~~  249 (254)
T 1a81_A          234 EHYSYKADGLLRVLTV  249 (254)
T ss_dssp             HHHTTCCTTSSSCCCC
T ss_pred             HHHHHCCCCCCeecCC
Confidence            9999999998876543

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.85  E-value=3.3e-21  Score=161.49  Aligned_cols=89  Identities=21%  Similarity=0.184  Sum_probs=80.2

Q ss_pred             cCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      +.++||| .|+|++||++|.  +.++|+||||+|  .+|.|+|||+.++.|+||+|.+.++|.|++.....|+||.+||+
T Consensus         3 ~~~~Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~   82 (254)
T 1a81_A            3 NHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCH   82 (254)
T ss_dssp             TSSTTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             ccCccccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHH
Confidence            4479999 999999999995  468999999999  68999999999999999999987778888877789999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+.++++++..+.
T Consensus        83 ~y~~~~~~l~~~L~   96 (254)
T 1a81_A           83 YHSQESDGLVCLLK   96 (254)
T ss_dssp             HHTTCCTTSSSCCC
T ss_pred             HHHhCCCCceECCc
Confidence            99999998876553

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=5.1e-22  Score=150.53  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=65.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeeeC--CcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVCS--GAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~~--~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      ++.++||| .+.+        +. .+|+||||+| .+|.|+|||+.+  ++|+||+|.+.++ .|++.+...|+||.|||
T Consensus        27 l~~~~Wyh~Ll~~--------g~~~dG~FLVR~S~~~g~y~LSv~~~~~~~vkH~rI~~~~~-~~~i~~~~~F~sL~eLV   97 (126)
T 2cr4_A           27 CEVERLFKATSPR--------GEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDS-KFYLEGEVLFVSVGSMV   97 (126)
T ss_dssp             HHHHHHHHHHSTT--------SCCCTTCEEEEECSSTTCEEEEEEETTTTEECCEECEEETT-EEESSSSCEESSHHHHH
T ss_pred             cccCCCHHHHhhC--------CCCCCCeEEEEecCCCCCEEEEEEeCCCCCEEEEEEEECCC-eEEEcCCccCCCHHHHH
Confidence            56789999 3221        23 4699999999 999999999999  9999999998765 77887778999999999


Q ss_pred             HHHhhCCccccc
Q psy13388        179 LHYAANSLEEHN  190 (196)
Q Consensus       179 ~hY~~~~l~~~~  190 (196)
                      +||+++++....
T Consensus        98 ~hY~~~~l~~~~  109 (126)
T 2cr4_A           98 EHYHTHVLPSHQ  109 (126)
T ss_dssp             HHHTTSCCSSSS
T ss_pred             HHHhhCCcCCCC
Confidence            999999998754

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.85  E-value=7.1e-22  Score=178.20  Aligned_cols=103  Identities=22%  Similarity=0.308  Sum_probs=85.2

Q ss_pred             CCccccc-cccCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcccc-----c-cCCH
Q psy13388         43 DPGVASR-GLSLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWL-----V-RMSR  115 (196)
Q Consensus        43 dp~~~~~-~~~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~Wy-----~-~isR  115 (196)
                      |++||.+ ...+|++|+||.|||++.+                                   ++.++||     | .|+|
T Consensus        16 ~~~ww~~~~~~~~~~g~~P~~~v~~~~-----------------------------------~~~~~wy~~~w~hg~i~r   60 (463)
T 3cxl_A           16 FQGVWKSYLYQLQQEAPHPRRITCTCE-----------------------------------VENRPKYYGREFHGMISR   60 (463)
T ss_dssp             --CCSCCHHHHHHHHSCCCEECCCCCC-----------------------------------CTTCCTTCCTTBCCSCCH
T ss_pred             CCCEEEEEecCcCccCCCCcCccCCcc-----------------------------------ccCCCCccccccccCCCH
Confidence            5678754 4566799999999997632                                   3344555     9 9999


Q ss_pred             HHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH-----HHhhC
Q psy13388        116 AQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL-----HYAAN  184 (196)
Q Consensus       116 ~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~-----hY~~~  184 (196)
                      ++||++|.. ++|+||||+|  .+|.|+||++.+++|+||+|.+  +|.|+++. ..|+||.|||+     ||+.+
T Consensus        61 ~~ae~lL~~-~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~--~g~~~~~~-~~F~sl~~Lv~dGl~~~~~~~  132 (463)
T 3cxl_A           61 EAADQLLIV-AEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYY--DGKHFVGE-KRFESIHDLVTDGLITLYIET  132 (463)
T ss_dssp             HHHHHHHTT-STTEEEEEECSSSTTCEEEEEECSSSEEEEECEE--SSSEESSS-CCBSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcC-CCCeEEEeccCCCCCCEEEEEEECCEEEEEEEec--CCeEEECC-CccCCHHHHHHHHHHhhhccC
Confidence            999999974 6899999999  8899999999999999999987  57788875 78999999999     99754

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.85  E-value=1.9e-21  Score=162.59  Aligned_cols=84  Identities=33%  Similarity=0.581  Sum_probs=74.1

Q ss_pred             cCccccc-cC-----CHHHHHHHHh------CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCC---eEEecC
Q psy13388        105 DEKTWLV-RM-----SRAQAEALLS------GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERG---FGFAEP  167 (196)
Q Consensus       105 ~~~~Wy~-~i-----sR~eAe~lL~------~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g---~~~~~~  167 (196)
                      ..++||| .|     +|++||++|+      +.++|+||||+|  .+|.|+|||+.+++|+||+|...+++   .|++.+
T Consensus         2 ~~e~WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~   81 (246)
T 4fbn_A            2 SNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTD   81 (246)
T ss_dssp             -CCTTBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEET
T ss_pred             CCCCCcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecC
Confidence            3479999 99     7999999996      478999999999  89999999999999999999886654   578877


Q ss_pred             CCcCCCHHHHHHHHhhCCccc
Q psy13388        168 FNIYPSLGALVLHYAANSLEE  188 (196)
Q Consensus       168 ~~~F~sL~dLI~hY~~~~l~~  188 (196)
                      ...|+||.+||+||+++++..
T Consensus        82 ~~~F~sl~~LV~~y~~~~l~~  102 (246)
T 4fbn_A           82 NLVFDSLYDLITHYQQVPLRC  102 (246)
T ss_dssp             TEEESSHHHHHHHHHHSCEEC
T ss_pred             CcccCCHHHHHHhHhhccccc
Confidence            789999999999999998753

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.85  E-value=1.8e-21  Score=156.73  Aligned_cols=86  Identities=24%  Similarity=0.276  Sum_probs=75.6

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCC----CcCCCHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF----NIYPSLG  175 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~----~~F~sL~  175 (196)
                      .++.++||| .|+|++||++|.+.++|+||||+|  ..+.|+||++.+++|+||+|... +|.|++...    ..|+||.
T Consensus        30 ~l~~~~WYhG~isR~eAE~lL~~~~dGtFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~-~g~f~l~~~~~~~~~F~SL~  108 (187)
T 2izv_A           30 QINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQW-NHNFSFDAHDPCVFHSPDIT  108 (187)
T ss_dssp             HHHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEE-TTEEESCTTCTTSCCBSSHH
T ss_pred             hcccCCccccCCCHHHHHHHhcCCCCCcEEEEECCCCCceEEEEEeeCCeEEEEEEEEC-CCEEEEeccCCCccccCCHH
Confidence            356789999 999999999999889999999999  56678999999999999999987 566777643    3799999


Q ss_pred             HHHHHHhhCCcccc
Q psy13388        176 ALVLHYAANSLEEH  189 (196)
Q Consensus       176 dLI~hY~~~~l~~~  189 (196)
                      +||+||++++++++
T Consensus       109 eLV~hY~~~~~~~~  122 (187)
T 2izv_A          109 GLLEHYKDPSACMF  122 (187)
T ss_dssp             HHHHHTCCGGGCCT
T ss_pred             HHHHHHHhcccccc
Confidence            99999999998875

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.83  E-value=2.5e-20  Score=147.59  Aligned_cols=83  Identities=28%  Similarity=0.395  Sum_probs=74.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCc---ceEEEEEE---ecC----CeEEecCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGA---PKHCLVYE---TER----GFGFAEPF  168 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~---vkH~rI~~---~~~----g~~~~~~~  168 (196)
                      .++.++||| .|+|++||++|+.  +++|+||||+| .+|.|+|||+..++   |+||+|.+   ..+    |.|++. .
T Consensus         8 ~l~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~-~   86 (174)
T 3qwx_X            8 PFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIA-N   86 (174)
T ss_dssp             GGGGGGGEETTCCHHHHHHHHHSTTCCTTEEEEEECSSTTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCCCEEET-T
T ss_pred             ccccCCCccCCCCHHHHHHHHhccCCCCCeEEEEecCCCCCEEEEEEECCCCCceEEEEEEeccCCCCCcccceEEEC-C
Confidence            467789999 9999999999985  56899999999 99999999999999   99999988   334    478886 5


Q ss_pred             CcCCCHHHHHHHHhhCCc
Q psy13388        169 NIYPSLGALVLHYAANSL  186 (196)
Q Consensus       169 ~~F~sL~dLI~hY~~~~l  186 (196)
                      ..|+||.+||+||+.+++
T Consensus        87 ~~F~sl~eLv~~y~~~~~  104 (174)
T 3qwx_X           87 QSFPDIPALLNHFKMRVL  104 (174)
T ss_dssp             EEESSHHHHHHHTTSSCS
T ss_pred             eecCcHHHHhhhhhcCcc
Confidence            899999999999999986

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.82  E-value=2.9e-20  Score=159.55  Aligned_cols=83  Identities=27%  Similarity=0.402  Sum_probs=74.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCc---ceEEEEEE-ecC------CeEEecCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGA---PKHCLVYE-TER------GFGFAEPFN  169 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~---vkH~rI~~-~~~------g~~~~~~~~  169 (196)
                      ++.++||| .|+|++||++|+.  +++|+||||+| .+|.|+|||+..++   |+||+|.+ ..+      |.|++.. .
T Consensus        38 l~~~~Wyhg~i~R~~Ae~lL~~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~~-~  116 (308)
T 3qwy_A           38 FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIAN-Q  116 (308)
T ss_dssp             GGGGGGEETTCCHHHHHHHHHSTTCCTTEEEEEECSSTTCEEEEEECCSSSSCEEEEEEEECCCCTTTTCCCCEEETT-E
T ss_pred             ccccccccCCCCHHHHHHHHhccCCCCceEEEEccCCCCCEEEEEEeCCCCCceEEEEEeeccCCCcCcccceEEEeC-e
Confidence            56689999 9999999999975  57899999999 99999999999999   99999988 544      7788885 8


Q ss_pred             cCCCHHHHHHHHhhCCcc
Q psy13388        170 IYPSLGALVLHYAANSLE  187 (196)
Q Consensus       170 ~F~sL~dLI~hY~~~~l~  187 (196)
                      .|.+|.+||+||+.+++.
T Consensus       117 ~F~Sl~eLv~~y~~~~~~  134 (308)
T 3qwy_A          117 SFPDIPALLNHFKMRVLT  134 (308)
T ss_dssp             EESSHHHHHHHHHHSCSS
T ss_pred             eeCCHHHHHHHHhhcccc
Confidence            999999999999999874

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.82  E-value=6e-21  Score=163.68  Aligned_cols=84  Identities=30%  Similarity=0.472  Sum_probs=75.4

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEe-----------------cCCe
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYET-----------------ERGF  162 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~-----------------~~g~  162 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+..++|+||+|.+.                 .++.
T Consensus         7 ~~~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~   86 (304)
T 2eyz_A            7 SEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSR   86 (304)
T ss_dssp             CSSSSSSCCCCCCSSHHHHTTTTCCSSCEECCSCCSSSSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCC
T ss_pred             cccCCCCccCCCCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEeeccccccccccccccccccCCCe
Confidence            467789999 999999999999889999999999  78999999999999999999882                 4566


Q ss_pred             EEecCCCcCCCHHHHHHHHhhCCcc
Q psy13388        163 GFAEPFNIYPSLGALVLHYAANSLE  187 (196)
Q Consensus       163 ~~~~~~~~F~sL~dLI~hY~~~~l~  187 (196)
                      |++. ...|.||.+||+||+++++.
T Consensus        87 ~~~~-~~~F~sl~~LV~~y~~~~l~  110 (304)
T 2eyz_A           87 LRIG-DQEFDSLPALLEFYKIHYLD  110 (304)
T ss_dssp             CCBT-TBCCSCHHHHHTTTTTSCCS
T ss_pred             EEeC-CcEECCHHHHHHHhhhCccc
Confidence            6665 57999999999999999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.82  E-value=5.1e-20  Score=171.43  Aligned_cols=91  Identities=24%  Similarity=0.363  Sum_probs=84.1

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|++||++|+.  +++|+||||+| .+|.|+|||+.+++|+||+|.+..+|.|++.....|.||.+||
T Consensus       162 ~~~~~~Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv  241 (635)
T 4fl3_A          162 AHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  241 (635)
T ss_dssp             CGGGSTTBCCSCCHHHHHHHHHSSSCCTTCEEEEESSSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHH
T ss_pred             ccccCCceeccCCHHHHHHHHHcCCCCCceEEEEecCCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHH
Confidence            567789999 9999999999985  57999999999 9999999999999999999998888999998878999999999


Q ss_pred             HHHhhCCcccccccc
Q psy13388        179 LHYAANSLEEHNDDL  193 (196)
Q Consensus       179 ~hY~~~~l~~~~~~l  193 (196)
                      +||++++++++..+.
T Consensus       242 ~~y~~~~~~l~~~L~  256 (635)
T 4fl3_A          242 EHYSYKADGLLRVLT  256 (635)
T ss_dssp             HHHTTCCTTSSSCCC
T ss_pred             HHhhhCCCCCccccC
Confidence            999999999988754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.81  E-value=5e-20  Score=171.49  Aligned_cols=91  Identities=20%  Similarity=0.148  Sum_probs=83.2

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      .++.++||| .|+|++||++|+.  +++|+||||+|  .+|.|+|||+..++|+||+|.+.++|.|++.....|.||.+|
T Consensus         9 ~l~~~~Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~L   88 (635)
T 4fl3_A            9 SANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADL   88 (635)
T ss_dssp             CCTTCTTBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHH
T ss_pred             hhhcCCccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEeCCEEEeEEEEEcCCCCEEeCCCCccCCHHHH
Confidence            357789999 9999999999974  67999999999  799999999999999999999988889999888899999999


Q ss_pred             HHHHhhCCcccccccc
Q psy13388        178 VLHYAANSLEEHNDDL  193 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l  193 (196)
                      |+||++++++++..+.
T Consensus        89 v~~y~~~~~~l~~~L~  104 (635)
T 4fl3_A           89 CHYHSQESDGLVCLLK  104 (635)
T ss_dssp             HHHHTTCCTTSSSCCC
T ss_pred             HHHHhhCCCCCeeccC
Confidence            9999999999987654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.81  E-value=7.3e-20  Score=169.54  Aligned_cols=89  Identities=24%  Similarity=0.220  Sum_probs=81.1

Q ss_pred             cCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      +.++||| .|+|++||++|.  +.++|+||||+|  .+|.|+||++.+++|+||+|.+.++|.|++.....|.||.+||+
T Consensus         6 ~~~~W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~   85 (613)
T 2ozo_A            6 AHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE   85 (613)
T ss_dssp             SSCTTBCBSCCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             CCCCCcCccCCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcEEECCCCCcCCHHHHHH
Confidence            4468999 999999999994  468999999999  78999999999999999999988888899887789999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||++++++++..+.
T Consensus        86 ~y~~~~~~l~~~L~   99 (613)
T 2ozo_A           86 FYSRDPDGLPCNLR   99 (613)
T ss_dssp             HHTSCCTTSSSCCC
T ss_pred             HHhhCCCCCCccCC
Confidence            99999999987654

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.81  E-value=6.6e-20  Score=153.18  Aligned_cols=88  Identities=31%  Similarity=0.440  Sum_probs=76.8

Q ss_pred             CcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|... .+|+||||+| .+|.|+||++..++|+||+|... ++.|++. ...|+||.+||+|
T Consensus       119 ~~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s~~~g~y~Lsv~~~~~v~H~~I~~~-~~~~~~~-~~~F~sL~~Lv~~  196 (246)
T 4fbn_A          119 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQE-GQTVMLG-NSEFDSLVDLISY  196 (246)
T ss_dssp             GGGSTTEESSCCHHHHHHHHHTSCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEEE-TTEEEET-TEEESCHHHHHHH
T ss_pred             cccCCeeecCccHHHHHHHHhhCCCCCeEEEEecCCCCCEEEEEEeCCCeEEEEEEeC-CCEEEeC-CCccCCHHHHHHH
Confidence            46689999 99999999999864 6899999999 89999999999999999999874 4555555 4789999999999


Q ss_pred             HhhCCcccccccc
Q psy13388        181 YAANSLEEHNDDL  193 (196)
Q Consensus       181 Y~~~~l~~~~~~l  193 (196)
                      |+++++++...+.
T Consensus       197 y~~~p~~~~~~L~  209 (246)
T 4fbn_A          197 YEKHPLYRKMKLR  209 (246)
T ss_dssp             HHHSCSBTTBCCC
T ss_pred             hCcCCCCCCcCCC
Confidence            9999999876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.80  E-value=1.3e-19  Score=167.84  Aligned_cols=92  Identities=25%  Similarity=0.326  Sum_probs=83.7

Q ss_pred             CCCcCccccc-cCCHHHHHHHHh--CCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        102 PHHDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       102 ~~l~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      ..++.++||| .|+|++||++|+  ++++|+||||+| .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+|
T Consensus       156 ~~~~~~~wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~L  235 (613)
T 2ozo_A          156 TAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQL  235 (613)
T ss_dssp             SCTTTSTTBCTTCCHHHHHHHHSSSCCCTTCEEEEECSSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHH
T ss_pred             cccccCCccccCCCHHHHHHHHhhcCCCCceEEEEecCCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHH
Confidence            3567889999 999999999998  468999999999 899999999999999999999888888998877899999999


Q ss_pred             HHHHhhCCcccccccc
Q psy13388        178 VLHYAANSLEEHNDDL  193 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l  193 (196)
                      |+||+.++++++..+.
T Consensus       236 v~~y~~~~~~l~~~L~  251 (613)
T 2ozo_A          236 VEYLKLKADGLIYCLK  251 (613)
T ss_dssp             HHHHHHCCTTCSSCCC
T ss_pred             HHHHhhCCCCceeccc
Confidence            9999999999987554

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.68  E-value=3.3e-21  Score=165.22  Aligned_cols=83  Identities=27%  Similarity=0.418  Sum_probs=76.5

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.++||| .|+|++||++|+..++|+||||+|  .+|.|+|||+..++|+||+|.+..+|.|++.. ..|.||.+||+
T Consensus         8 ~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~-~~F~sl~~Lv~   86 (303)
T 2lqn_A            8 SSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGD-QEFDHLPALLE   86 (303)
Confidence            457789999 999999999999889999999999  88999999999999999999987777777775 89999999999


Q ss_pred             HHhhCCc
Q psy13388        180 HYAANSL  186 (196)
Q Consensus       180 hY~~~~l  186 (196)
                      ||+++++
T Consensus        87 ~y~~~~~   93 (303)
T 2lqn_A           87 FYKIHYL   93 (303)
Confidence            9999998

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.79  E-value=1.2e-19  Score=159.65  Aligned_cols=85  Identities=26%  Similarity=0.411  Sum_probs=76.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--C-CCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--T-TGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~-~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|.+||.+|.+.++|+||||+|  . +|.|+|||+..+.|+||+|... +|.|++.....|+||.+||
T Consensus         6 sL~~~~WYhG~IsR~eAE~lL~~~~dG~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~-~g~y~l~~~~~F~SL~eLV   84 (373)
T 3hhm_B            6 SLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR-DGKYGFSDPLTFSSVVELI   84 (373)
T ss_dssp             GGGGCTTEEESCCHHHHHHHTTTCCTTEEEEEECSCC--CCEEEEEEETTEEEEEEECCS-SSCBCSSSSCCBSSSHHHH
T ss_pred             CcccCCccCCCCCHHHHHHHhcCCCCCCEEEeccCCCCCCCEEEEEEECCeeEEEEEEec-CCeEEeCCCCCcCCHHHHH
Confidence            467789999 999999999999889999999999  4 8999999999999999999875 4667777768899999999


Q ss_pred             HHHhhCCccc
Q psy13388        179 LHYAANSLEE  188 (196)
Q Consensus       179 ~hY~~~~l~~  188 (196)
                      +||+.+++..
T Consensus        85 ~~Y~~~~l~~   94 (373)
T 3hhm_B           85 NHYRNESLAQ   94 (373)
T ss_dssp             HHHHHSCGGG
T ss_pred             HHHhhCCccc
Confidence            9999999654

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=154.27  Aligned_cols=83  Identities=27%  Similarity=0.384  Sum_probs=73.7

Q ss_pred             ccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHh
Q psy13388        107 KTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYA  182 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~  182 (196)
                      ++||| .|+|.+||++|.. ..+|+||||+|  .+|.|+||++.++.|+||+|... ++.|++.....|.||.|||+||+
T Consensus         2 ~~Wy~g~isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~-~~~~~~~~~~~F~sl~eLv~~y~   80 (595)
T 3ps5_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNS-GDFYDLYGGEKFATLTELVEYYT   80 (595)
T ss_dssp             CSCCCSSCCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEETTEEEEEEEEEC-SSCEESSSSCCBSSHHHHHHHHH
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEECCEEEEEEEEeC-CCcEEEecCccccchhhhhhhhc
Confidence            58999 9999999999975 48999999999  89999999999999999999864 45676666788999999999999


Q ss_pred             hCCccccc
Q psy13388        183 ANSLEEHN  190 (196)
Q Consensus       183 ~~~l~~~~  190 (196)
                      ++++.++.
T Consensus        81 ~~~~~l~~   88 (595)
T 3ps5_A           81 QQQGVLQD   88 (595)
T ss_dssp             TTSSCCBC
T ss_pred             cCcccccc
Confidence            99876654

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.71  E-value=1.3e-17  Score=152.42  Aligned_cols=79  Identities=28%  Similarity=0.403  Sum_probs=70.9

Q ss_pred             ccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHh
Q psy13388        107 KTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYA  182 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~  182 (196)
                      ++||| .|+|++||++|.. .++|+||||+|  .+|.|+|||+.+++|+||+|.. .+|+|++.+...|+||.+||+||+
T Consensus         2 ~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~Lv~~y~   80 (532)
T 2b3o_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQN-SGDFYDLYGGEKFATLTELVEYYT   80 (532)
T ss_dssp             CTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEETTEEEEEEEEC-SSSCEEETTSCEESCHHHHHHHHH
T ss_pred             CCceeCCCCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEECCEEEEEEEEe-cCCEEEECCCcccCCHHHHHHHHH
Confidence            58999 9999999999985 38999999999  7899999999999999999986 456777766688999999999999


Q ss_pred             hCCc
Q psy13388        183 ANSL  186 (196)
Q Consensus       183 ~~~l  186 (196)
                      .+++
T Consensus        81 ~~~~   84 (532)
T 2b3o_A           81 QQQG   84 (532)
T ss_dssp             TTCS
T ss_pred             hccc
Confidence            9883

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.71  E-value=2.6e-17  Score=150.35  Aligned_cols=83  Identities=28%  Similarity=0.398  Sum_probs=73.1

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      +.++||| .|+|++||++|.. .++|+||||+|  .+|.|+||++.++.|+||+|... ++.|++.+...|+||.+||+|
T Consensus         2 ~~~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~-~~~~~l~~~~~F~sl~eLv~~   80 (525)
T 2shp_A            2 KSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNT-GDYYDLYGGEKFATLAELVQY   80 (525)
T ss_dssp             CCSTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECS-SSCEEETTSCEESSHHHHHHH
T ss_pred             CCCCcccCCCCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEECCEEEEEEEEec-CCeEEECCCCeECCHHHHHHH
Confidence            4579999 9999999999974 48999999999  78999999999999999999864 456767666899999999999


Q ss_pred             HhhCCccc
Q psy13388        181 YAANSLEE  188 (196)
Q Consensus       181 Y~~~~l~~  188 (196)
                      |+.+++.+
T Consensus        81 y~~~~~~l   88 (525)
T 2shp_A           81 YMEHHGQL   88 (525)
T ss_dssp             HHTCTTCS
T ss_pred             HHhCCccc
Confidence            99998655

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.71  E-value=1.4e-17  Score=154.25  Aligned_cols=87  Identities=31%  Similarity=0.437  Sum_probs=75.8

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCC---------cceEEEEEEecCCeEEecCCCcC
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSG---------APKHCLVYETERGFGFAEPFNIY  171 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~---------~vkH~rI~~~~~g~~~~~~~~~F  171 (196)
                      ..++||| .|+|.+||++|.. ..+|+||||+|  .+|.|+|||+..+         +|+||+|.. .+|.|++.....|
T Consensus       106 ~~~~Wy~g~~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~-~~~~~~~~~~~~F  184 (595)
T 3ps5_A          106 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMC-EGGRYTVGGLETF  184 (595)
T ss_dssp             CCSTTEEESCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBC-GGGCBBSSSSCCB
T ss_pred             cccccccccCCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEE-eCCEEEEcCCcCC
Confidence            4578999 9999999999964 67899999999  8999999999987         899999987 4567788777899


Q ss_pred             CCHHHHHHHHhhCCccccccc
Q psy13388        172 PSLGALVLHYAANSLEEHNDD  192 (196)
Q Consensus       172 ~sL~dLI~hY~~~~l~~~~~~  192 (196)
                      +||.+||+||+++++....-.
T Consensus       185 ~sl~~LV~~y~~~~l~~~~g~  205 (595)
T 3ps5_A          185 DSLTDLVEHFKKTGIEEASGA  205 (595)
T ss_dssp             SSHHHHHHHHHHSCBCCTTSC
T ss_pred             CCHHHHHHHHhcCCccccCCc
Confidence            999999999999888765433

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.67  E-value=2.6e-16  Score=143.71  Aligned_cols=83  Identities=28%  Similarity=0.412  Sum_probs=74.1

Q ss_pred             cCccccc-cCCHHHHHHHHhCC-CCceEEEeeC--CCCCeEEEeeeCC----------cceEEEEEEecCCeEEecCCCc
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS--TTGQYALSIVCSG----------APKHCLVYETERGFGFAEPFNI  170 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S--~~g~y~LSvr~~~----------~vkH~rI~~~~~g~~~~~~~~~  170 (196)
                      +.++||| .|+|.+||++|+.. ++|+||||+|  .+|.|+||++..+          +|+||+|... +|.|++.....
T Consensus       108 ~~~~w~~g~~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~-~g~~~l~~~~~  186 (525)
T 2shp_A          108 TSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQ-ELKYDVGGGER  186 (525)
T ss_dssp             TTCTTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEE-TTEEESSSSCC
T ss_pred             ccceeecccCCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEec-CCeEEECCCce
Confidence            4468999 99999999999854 8999999999  7899999999987          8999999886 57788887789


Q ss_pred             CCCHHHHHHHHhhCCccc
Q psy13388        171 YPSLGALVLHYAANSLEE  188 (196)
Q Consensus       171 F~sL~dLI~hY~~~~l~~  188 (196)
                      |.||.+||+||+++++..
T Consensus       187 F~sL~eLV~~y~~~~l~~  204 (525)
T 2shp_A          187 FDSLTDLVEHYKKNPMVE  204 (525)
T ss_dssp             BSSHHHHHHHHHHSCCBC
T ss_pred             eCcHHHHHHhhhccCccc
Confidence            999999999999998754

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.67  E-value=4.2e-18  Score=149.90  Aligned_cols=82  Identities=55%  Similarity=0.993  Sum_probs=0.0

Q ss_pred             ccCCCCCCCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388         96 RTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus        96 ~~~~~l~~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      +.+.+++.++.++||| .|+|.+||.+|...++|+||||+| .+|.|+|||+.++.|+||+|.+.++|+||+.....|+|
T Consensus       290 e~~~~~~~~~~~~WyhG~isR~~AE~LL~~~~~G~FLVR~Ss~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~S  369 (373)
T 3hhm_B          290 EDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSS  369 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccCCCCcCCCCCHHHHHHHhccCCCCcEEEEecCCCCCEEEEEEECCeEEEEEEEEcCCCcEEeCCCCCCCC
Confidence            3445667788899999 999999999998889999999999 99999999999999999999998888888887789999


Q ss_pred             HHHH
Q psy13388        174 LGAL  177 (196)
Q Consensus       174 L~dL  177 (196)
                      |.+|
T Consensus       370 L~eL  373 (373)
T 3hhm_B          370 LKEL  373 (373)
T ss_dssp             ----
T ss_pred             hhhC
Confidence            9987

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.63  E-value=2.7e-16  Score=143.77  Aligned_cols=82  Identities=30%  Similarity=0.434  Sum_probs=72.3

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCC---------cceEEEEEEecCCeEEecCCCcC
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSG---------APKHCLVYETERGFGFAEPFNIY  171 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~---------~vkH~rI~~~~~g~~~~~~~~~F  171 (196)
                      +.++||| .|+|++||.+|+. .++|+||||+|  .+|.|+|||+..+         .|+||+|... +|.|+++....|
T Consensus       106 ~~~~w~~g~i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~-~g~~~l~~~~~F  184 (532)
T 2b3o_A          106 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCE-GGRYTVGGLETF  184 (532)
T ss_dssp             GGCTTBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCC-TTSBBSSSSCCB
T ss_pred             ccccccccccchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEc-CCceeeCCCccc
Confidence            4468999 9999999999974 57899999999  8899999999877         8999999886 567888767899


Q ss_pred             CCHHHHHHHHhhCCcc
Q psy13388        172 PSLGALVLHYAANSLE  187 (196)
Q Consensus       172 ~sL~dLI~hY~~~~l~  187 (196)
                      .+|.+||+||+++++.
T Consensus       185 ~sl~eLV~~y~~~~l~  200 (532)
T 2b3o_A          185 DSLTDLVEHFKKTGIE  200 (532)
T ss_dssp             SSHHHHHHHHHHHCEE
T ss_pred             CcHHHHHhhccccCcc
Confidence            9999999999998654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.61  E-value=3.9e-16  Score=135.51  Aligned_cols=83  Identities=27%  Similarity=0.448  Sum_probs=58.9

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      .++.++||| .|+|++||++|+  ++|+||||+| ....|+|||+..++|+||+|...+ +.|.+. ...|++|.+||+|
T Consensus         9 ~l~~~~wyhg~i~r~~a~~lL~--~~G~flvR~s~~~~~~~lsv~~~~~~~h~~i~~~~-~~~~~~-~~~F~sl~~LI~~   84 (377)
T 3cbl_A            9 PLHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLD-NLYRLE-GEGFPSIPLLIDH   84 (377)
T ss_dssp             CGGGCTTBCTTCCHHHHHHHCC--STTEEEEEECC--CCEEEEC-----CCEEEC-----CCCCC-----CCSHHHHHHH
T ss_pred             ccccCCccCCCCCHHHHHHHHh--cCCCEEEEEeCCCCcEEEEEEECCCccchhhcccc-ceEEec-ceeccchHHHHHH
Confidence            357789999 999999999998  7899999999 444999999999999999998765 444444 4789999999999


Q ss_pred             HhhCCcccc
Q psy13388        181 YAANSLEEH  189 (196)
Q Consensus       181 Y~~~~l~~~  189 (196)
                      |+.++..++
T Consensus        85 y~~~~~~l~   93 (377)
T 3cbl_A           85 LLSTQQPLT   93 (377)
T ss_dssp             HHHHTCCC-
T ss_pred             HhhccCCcc
Confidence            998766543

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.28  E-value=6.6e-12  Score=100.00  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=64.5

Q ss_pred             CccccccCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeee-CCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHHhh
Q psy13388        106 EKTWLVRMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVC-SGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAA  183 (196)
Q Consensus       106 ~~~Wy~~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~-~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~~  183 (196)
                      .+|||++++..|||++|... +|+||||+| .++.++|+++. ++.++|++|...+ ..+.+++ ..|.+|.|||.+|.+
T Consensus        13 ~HP~F~n~s~~qAe~~L~~~-~G~~liRPSsk~~~ltit~Kv~d~~~~Hi~I~E~~-k~l~ig~-~~fedLDElI~~yv~   89 (178)
T 2xp1_A           13 KHPLFKNFNVTESENYLRSS-TDDFLIRKGSRHGYCVLVIKFASDVFVHMKIEEHS-EHYTCSN-KHFEDIDEVISVYVR   89 (178)
T ss_dssp             GSTTEECCCHHHHHHHHHHS-SCCEEEEECSSTTEEEEEEEEETTEEEEEEEEECS-SCEEETT-EEESSHHHHHHHTHH
T ss_pred             cCCCcCCCCHHHHHHHHhcC-CCCEEEeecCCCCcEEEEEEECCCcEEEEEEEECC-CEEEECC-cEECCHHHHHHHHHH
Confidence            47999999999999999874 599999999 87789999995 7788999997644 3466665 589999999999987

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=98.46  E-value=1e-08  Score=74.48  Aligned_cols=57  Identities=16%  Similarity=0.257  Sum_probs=44.4

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKT  108 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~  108 (196)
                      .+.|+...+.   |.+||.... ..|+.|+||.|||...+                                  .++.++
T Consensus        46 ~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~----------------------------------~~~~~~   91 (109)
T 2yt6_A           46 FKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD----------------------------------SIQAEE   91 (109)
T ss_dssp             CCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESS----------------------------------SCTTTH
T ss_pred             CCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECC----------------------------------cccccc
Confidence            4567776653   567886443 67999999999999855                                  245678


Q ss_pred             ccc-cCCHHHHHHHHh
Q psy13388        109 WLV-RMSRAQAEALLS  123 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~  123 (196)
                      ||| .|+|.+||++|.
T Consensus        92 w~~g~isR~~Ae~lL~  107 (109)
T 2yt6_A           92 WYFGKMGRKDAESGPS  107 (109)
T ss_dssp             HHHHCCCSCCCCCCSC
T ss_pred             cccCCcCHHHHHHHhh
Confidence            999 999999999885

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=98.21  E-value=2.7e-06  Score=67.52  Aligned_cols=73  Identities=14%  Similarity=0.132  Sum_probs=57.6

Q ss_pred             CccccccCCHHHHHHHHhCCCCce--EEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        106 EKTWLVRMSRAQAEALLSGRPDGT--FLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       106 ~~~Wy~~isR~eAe~lL~~~~~G~--FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      .++||+. +++++|++|....++.  |.++.+  .||.|+|++. .+.++|-.|... .|+.|  ....|+||.+||+||
T Consensus       100 ~h~kf~~-s~~~~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~-~~~~~~e~i~V~-~g~~~--~~~~f~sl~~L~~~f  174 (178)
T 2xp1_A          100 AHAKYFN-SPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYN-NGSILEEYIGVS-DMLTY--NNSTFKDIDSFVAYR  174 (178)
T ss_dssp             HSTTBCS-CTTTSHHHHHTCCSSSCEEEEEECSSSTTEEEEEEE-SSSEEEEEEEES-SSEEE--TTEEESSHHHHHHHH
T ss_pred             hCCccCC-CHHHHHHHHHHhCCCCceEEEEecCCCCCeEEEEEc-CCCCceeeEEEc-cCCEE--cCcCCcCHHHHHHHH
Confidence            4689997 7889999997543333  888888  8999999997 667887666666 56655  457899999999999


Q ss_pred             hh
Q psy13388        182 AA  183 (196)
Q Consensus       182 ~~  183 (196)
                      ++
T Consensus       175 K~  176 (178)
T 2xp1_A          175 KR  176 (178)
T ss_dssp             HC
T ss_pred             hh
Confidence            86

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=97.87  E-value=1.2e-05  Score=72.20  Aligned_cols=68  Identities=22%  Similarity=0.333  Sum_probs=55.5

Q ss_pred             ccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeC---CcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        107 KTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCS---GAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~---~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ..|++ .|+|++|+++|...+.|+||||-|  ..|.|++++...   ++++||.|..... .      ..-.+|.|.|.-
T Consensus       351 dg~I~GFIsk~ea~~lL~~~~~GTFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p~t~-~------ls~~SL~D~I~d  423 (473)
T 1uur_A          351 EGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDT-A------AAKKTFPDFLSE  423 (473)
T ss_dssp             HTSSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGS-B------TTTBCHHHHHTT
T ss_pred             cCcEEEEecHHHHHHHhhCCCCCeEEEEeccCCCceEEEEEEeecCCCceeEEEecCCcc-c------cccCCHHHHHhc
Confidence            47999 999999999999999999999999  799999999874   6899998865322 1      233577888776


Q ss_pred             H
Q psy13388        181 Y  181 (196)
Q Consensus       181 Y  181 (196)
                      |
T Consensus       424 ~  424 (473)
T 1uur_A          424 H  424 (473)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=97.81  E-value=9.1e-06  Score=56.80  Aligned_cols=55  Identities=16%  Similarity=0.082  Sum_probs=25.0

Q ss_pred             CCCCcceec--CCccccccc-cCCCcceeeccceEeccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcCcccc
Q psy13388         34 RLGPGYSIA--DPGVASRGL-SLAEQDFLTMNCALAVTGGGSDSASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWL  110 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~-~~g~~G~vP~nyv~~~~~~~s~~~~~~~~~~~~~p~~p~~~~~~~~~~~l~~l~~~~Wy  110 (196)
                      +.|+...+.  +.+||.... ..|++|+||.|||..+..                                  ... .+|
T Consensus        23 ~~Gd~i~v~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~----------------------------------~~~-~~~   67 (90)
T 3reb_B           23 QKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS----------------------------------GGG-TSG   67 (90)
T ss_dssp             CTTCEEEEEECSSSEEEEEETTTCCEEEEEGGGEEEECC-----------------------------------------
T ss_pred             CCCCEEEEEEeCCCEEEEEECCCCCEEEEehhheEECCC----------------------------------CCC-ccc
Confidence            446665543  346876443 679999999999998651                                  122 349


Q ss_pred             c-cCCHHHHHHHHh
Q psy13388        111 V-RMSRAQAEALLS  123 (196)
Q Consensus       111 ~-~isR~eAe~lL~  123 (196)
                      + .|+|.+|+.+|+
T Consensus        68 ~~~~~r~~ae~lL~   81 (90)
T 3reb_B           68 GGRHRRRQAERMSQ   81 (90)
T ss_dssp             --------------
T ss_pred             ccCcCHHHHHHHHh
Confidence            9 999999999995

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.20  E-value=0.00045  Score=47.53  Aligned_cols=36  Identities=6%  Similarity=-0.017  Sum_probs=26.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++   |.+||..+...|++|+||.|||.+..
T Consensus        38 ~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           38 LRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             CCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred             CCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence            4566666643   45788765567999999999999853

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=96.95  E-value=0.00038  Score=47.97  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=25.8

Q ss_pred             CCCCcceec---CCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+.+.+.   |.+||.... ..|++|+||.|||..++
T Consensus        26 ~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (84)
T 4ag1_C           26 HKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVD   64 (84)
T ss_dssp             CTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             cCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            456666543   467876444 58999999999999866

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=96.85  E-value=0.00037  Score=46.72  Aligned_cols=34  Identities=12%  Similarity=0.063  Sum_probs=23.8

Q ss_pred             CCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++    |++|+... ..|++|+||.|||....
T Consensus        29 ~~Gd~i~v~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A           29 KRGDILKVLNEECDQNWYKAE-LNGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             CTTCEEECCBCSSCSSEEEEE-ETTEEEEEEGGGEEEEC
T ss_pred             cCCCEEEEeEecCCCCEEEEE-ECCCEEEEehHhEEEcC
Confidence            446665543    45677644 57899999999998743

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.65  E-value=0.003  Score=44.12  Aligned_cols=36  Identities=11%  Similarity=0.085  Sum_probs=26.4

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEeccC
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      .+.|+...+.     |.+||... ..|++|+||.|||..+..
T Consensus        24 f~~Gd~i~v~~~~~~~~gWw~g~-~~g~~G~~P~~yv~~~~~   64 (93)
T 1uff_A           24 FNSGDIIQVDEKTVGEPGWLYGS-FQGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             BCTTCEEEECSSCCCSSSEEEEE-ETTEEEEEETTTEEECCS
T ss_pred             CCCCCEEEEeEccCCCCCEEEEE-ECCCEEEechHHeEEcCC
Confidence            3457776654     45787644 568999999999998764

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=96.53  E-value=0.0014  Score=42.54  Aligned_cols=33  Identities=9%  Similarity=0.021  Sum_probs=24.7

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .|++||......|++|++|.|||..
T Consensus        24 ~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~   59 (60)
T 2lx7_A           24 AAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQL   59 (60)
T ss_dssp             CTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEE
T ss_pred             CCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEE
Confidence            44666554   3567987666779999999999975

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=96.47  E-value=0.0028  Score=58.44  Aligned_cols=67  Identities=22%  Similarity=0.208  Sum_probs=47.8

Q ss_pred             ccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCC-cceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        109 WLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSG-APKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~-~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      |.+ .|+|.+|+.+|...+.|+||||-|  ..|.|+++....+ ..+++.|.....      .+..-.+|.|+|..|
T Consensus       466 ~I~Gfisk~~a~~~L~~~~~GtFLlRFSds~~G~~tisyv~~~~~~~v~~v~P~t~------kdl~~~sL~d~I~d~  536 (585)
T 1y1u_A          466 AILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLKPFTT------RDFSIRSLADRLGDL  536 (585)
T ss_dssp             CCCBSCCHHHHHHHHHTSCTTCEEEEEETTSTTEEEEEECCSSCCSSCSEEEEECH------HHHHHSCHHHHHHHC
T ss_pred             ceEEeccHHHHHHHHhCCCCCceEEEeccCCcCcEEEEEEecCCCceeEeecCCch------hhcccCCHHHHHhcc
Confidence            335 689999999999999999999999  7999999997742 233344433211      112245788888876

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=96.43  E-value=0.0015  Score=43.48  Aligned_cols=34  Identities=9%  Similarity=-0.042  Sum_probs=25.0

Q ss_pred             CCCCCcceecC--------CccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIAD--------PGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~d--------p~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+.+.+++        .+||......|++|+||+|||..
T Consensus        27 f~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~   68 (69)
T 1nm7_A           27 LKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI   68 (69)
T ss_dssp             CCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEE
T ss_pred             CCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEE
Confidence            34577666533        37887666579999999999975

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=96.43  E-value=0.0005  Score=68.25  Aligned_cols=78  Identities=22%  Similarity=0.374  Sum_probs=0.0

Q ss_pred             CccccccCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeC-CcceEEEEEEecC------C-eEEecCCCcCCCHH
Q psy13388        106 EKTWLVRMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCS-GAPKHCLVYETER------G-FGFAEPFNIYPSLG  175 (196)
Q Consensus       106 ~~~Wy~~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~-~~vkH~rI~~~~~------g-~~~~~~~~~F~sL~  175 (196)
                      .+|-||+++-.+|++.|.....|.++||+|  .....+++++.. +...|+-|...+.      | .++|+. ..|.+|.
T Consensus      1023 ~HP~F~n~~~~qAe~~L~~~~~Gd~vIRPSSkG~dhLtvTwKv~d~vyqHidV~E~~K~n~~slG~~L~I~~-~~y~DLD 1101 (1219)
T 3psi_A         1023 NHPYYFPFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVDN-QKYNDLD 1101 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCCCCCCCHHHHHHHHhcCCCCCEEEeecCCCCCceEEEEEEcCCcEEEEEEEecCCccccccCceEEECC-ceECCHH
Confidence            368888999999999999889999999999  455677888774 6678998875321      2 245554 5899999


Q ss_pred             HHHHHHhhC
Q psy13388        176 ALVLHYAAN  184 (196)
Q Consensus       176 dLI~hY~~~  184 (196)
                      |||.-|-+.
T Consensus      1102 Eli~r~V~p 1110 (1219)
T 3psi_A         1102 QIIVEYLQN 1110 (1219)
T ss_dssp             ---------
T ss_pred             HHHHHHHHH
Confidence            999988654

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.34  E-value=0.0051  Score=43.22  Aligned_cols=37  Identities=14%  Similarity=0.029  Sum_probs=28.3

Q ss_pred             CCCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++.|+.+.++    +.+||......|+.|+||.|||..+.
T Consensus        41 sf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~   81 (96)
T 1wie_A           41 PLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             CCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             eECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcC
Confidence            34667777765    45688766657999999999999866

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=96.33  E-value=0.0022  Score=42.17  Aligned_cols=34  Identities=15%  Similarity=0.050  Sum_probs=24.7

Q ss_pred             CCCCccee---cCCcccc-ccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVAS-RGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~-~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .|.+||. +....|++|+||.|||.++
T Consensus        26 ~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A           26 RDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             CTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             CCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEE
Confidence            44666553   4567875 3456799999999999875

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=96.19  E-value=0.0025  Score=43.23  Aligned_cols=35  Identities=11%  Similarity=0.117  Sum_probs=25.5

Q ss_pred             CCCCcceec---CCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||.... ..|++|+||.|||..++
T Consensus        25 ~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   63 (79)
T 3cqt_A           25 HKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVD   63 (79)
T ss_dssp             CTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC-
T ss_pred             CCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECC
Confidence            457776654   467876443 68999999999999866

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=96.16  E-value=0.0052  Score=57.53  Aligned_cols=65  Identities=25%  Similarity=0.305  Sum_probs=47.3

Q ss_pred             cCCHHHHHHHHhCCCCceEEEeeC---CCCCeEEEeeeC---C-cceEEEEEEecCCeEEecCCCcCCCHHHHHHHHh
Q psy13388        112 RMSRAQAEALLSGRPDGTFLIRPS---TTGQYALSIVCS---G-APKHCLVYETERGFGFAEPFNIYPSLGALVLHYA  182 (196)
Q Consensus       112 ~isR~eAe~lL~~~~~G~FLVR~S---~~g~y~LSvr~~---~-~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~  182 (196)
                      .|+|.+|+.+|++.++|+||+|-|   ..|.++++....   + .++++.|..     |- ..+-.=-+|.|.|..|+
T Consensus       581 FIsK~~a~~lL~~~~~GTFLLRFSdS~~~Ggitia~V~~~~~~~~~~v~~v~P-----~t-~kdl~~~sl~d~i~d~~  652 (683)
T 1yvl_A          581 FISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEP-----YT-KKELSAVTFPDIIRNYK  652 (683)
T ss_dssp             CCCHHHHHHHHSSSCSSCEEEEECSSCSSCEEEEEEEECCC---CCEEEEBCC-----EE-HHHHTTSCHHHHHHHCC
T ss_pred             eecHHHHHHHHhCCCCCeEEEecCCCCCCCceEEEEEeccCCCccceEEecCC-----Cc-hHhhhhCCHHHHhhchh
Confidence            589999999999999999999987   688888888662   3 555555533     11 11122357899999985

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.15  E-value=0.0056  Score=41.27  Aligned_cols=35  Identities=6%  Similarity=-0.051  Sum_probs=26.0

Q ss_pred             CCCCCcceecC-------CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD-------PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d-------p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++.       .+||... ..|++|+||.|||...+
T Consensus        32 ~~~Gd~i~vl~~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   73 (79)
T 1uhc_A           32 VSANQKLKILEFKDVTGNTEWWLAE-VNGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             BCTTCEEEEEESCCTTSCTTEEEEE-SSSCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEECCCCCCCCCeEEEE-eCCCEEEEchHHeEECC
Confidence            45677766432       6787643 67899999999999865

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=96.10  E-value=0.0036  Score=40.76  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=25.6

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   |.+||......|++|+||.|||.+.+
T Consensus        28 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A           28 RKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEcC
Confidence            456666643   45788755567999999999998755

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=96.07  E-value=0.002  Score=44.62  Aligned_cols=32  Identities=13%  Similarity=0.227  Sum_probs=21.1

Q ss_pred             CCCCcceecC-----Cccccccc---cCCCcceeeccceE
Q psy13388         34 RLGPGYSIAD-----PGVASRGL---SLAEQDFLTMNCAL   65 (196)
Q Consensus        34 ~~~~~~~~~d-----p~~~~~~~---~~g~~G~vP~nyv~   65 (196)
                      ++|+.++|++     |+||..+.   ..+++||||+|||.
T Consensus        37 ~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl~   76 (82)
T 1u3o_A           37 QVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLC   76 (82)
T ss_dssp             CTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGSC
T ss_pred             cCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEEe
Confidence            4466666544     67875432   33478999999994

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=96.06  E-value=0.002  Score=40.93  Aligned_cols=33  Identities=15%  Similarity=0.175  Sum_probs=24.0

Q ss_pred             CCCCcceec----CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.    +.+|+......|++|+||.|||..
T Consensus        23 ~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~   59 (60)
T 2x3w_D           23 KAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA   59 (60)
T ss_dssp             CTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC
T ss_pred             CCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEE
Confidence            456666653    236876666679999999999975

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.97  E-value=0.0043  Score=41.90  Aligned_cols=35  Identities=9%  Similarity=-0.007  Sum_probs=25.4

Q ss_pred             CCCCCcceecC-----CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD-----PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d-----p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+++     .+||.... .|+.|+||.|||....
T Consensus        36 f~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   75 (80)
T 2d8h_A           36 FQAGDRITVISKTDSHFDWWEGKL-RGQTGIFPANYVTMNS   75 (80)
T ss_dssp             ECTTCEEEEEECCSCSSSEEEEEE-TTEEEEEEGGGCCBCC
T ss_pred             EcCCCEEEEeECcCCCCCeEEEEE-CCEEEEEchhHeEEcC
Confidence            35677766532     57876444 7899999999998755

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=95.95  E-value=0.00054  Score=63.15  Aligned_cols=68  Identities=25%  Similarity=0.388  Sum_probs=49.7

Q ss_pred             ccc-cCCHHHHHHHHhCCCCceEEEeeC-C--CCCeEEEeeeC---CcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        109 WLV-RMSRAQAEALLSGRPDGTFLIRPS-T--TGQYALSIVCS---GAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       109 Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~--~g~y~LSvr~~---~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      |-+ .|+|.+|+.+|.+...|+||+|-| .  .|.++++....   +.++|+.|..-      ...+....+|.|+|..|
T Consensus       458 ~I~Gfisk~~a~~lL~~~~~GTFLlRFSes~~~Ggitis~v~~~~~g~~~~~~v~P~------t~~~l~~~sLad~I~d~  531 (596)
T 1bg1_A          458 YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPY------TKQQLNNMSFAEIIMGY  531 (596)
T ss_dssp             CCCBCCCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCCB------CGGGGTSSCHHHHTTSC
T ss_pred             CeEEEecHHHHHHHHhCCCCCeeEEeecCCCCCCcEEEEEEecCCCCceeEEecCCC------chhhhccCCHHHHHHhh
Confidence            345 699999999999999999999988 4  89999998763   45666666431      11112345889999766


Q ss_pred             h
Q psy13388        182 A  182 (196)
Q Consensus       182 ~  182 (196)
                      +
T Consensus       532 ~  532 (596)
T 1bg1_A          532 K  532 (596)
T ss_dssp             C
T ss_pred             h
Confidence            3

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=95.95  E-value=0.0062  Score=39.99  Aligned_cols=35  Identities=11%  Similarity=0.154  Sum_probs=25.8

Q ss_pred             CCCCccee-----cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI-----ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~-----~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+     .+.+||......|+.|+||.|||..++
T Consensus        26 ~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (71)
T 1u5s_A           26 EKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             CSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECC
T ss_pred             CCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECC
Confidence            45666664     355788655567999999999999865

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=95.95  E-value=0.0016  Score=46.38  Aligned_cols=39  Identities=8%  Similarity=-0.043  Sum_probs=27.2

Q ss_pred             chhcCCCCCCccee-cCCccccccccCCCcceeeccceEe
Q psy13388         28 SAAAGGRLGPGYSI-ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        28 ~~~~~~~~~~~~~~-~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      ++.+|..+...... ++++||..+++.|..||||.|||+.
T Consensus        45 p~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~v   84 (96)
T 2gtj_A           45 SFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEI   84 (96)
T ss_dssp             EECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEE
T ss_pred             CcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEE
Confidence            33444444433332 3357998899999999999999976

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=95.94  E-value=0.003  Score=41.63  Aligned_cols=35  Identities=3%  Similarity=-0.122  Sum_probs=25.6

Q ss_pred             CCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++  +.+||......|++|+||+|||....
T Consensus        24 ~~Gd~i~vl~~~~~Ww~~~~~~g~~G~~Psnyv~~~~   60 (67)
T 2b86_A           24 KKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKL   60 (67)
T ss_dssp             CTTCEEEEEECSSSSCEEECTTSCEEECCCCSEEEC-
T ss_pred             CCCCEEEEEecCCCeEEEEeCCCCEEEeChHHEeEcC
Confidence            457776653  35788765557999999999998854

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=95.93  E-value=0.005  Score=40.31  Aligned_cols=36  Identities=6%  Similarity=-0.053  Sum_probs=26.7

Q ss_pred             CCCCCcceecC--CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD--PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d--p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+.+  .+||..+...|++|+||.|||....
T Consensus        27 ~~~Gd~i~v~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   64 (68)
T 2k2m_A           27 VKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNILTPYP   64 (68)
T ss_dssp             BCTTCEEEEEECSSSEEEEECTTSCCEEEEGGGEEECC
T ss_pred             CCCCCEEEEEEcCCCeEEEEeCCCCEEEEEhhhEEEcC
Confidence            34577766543  5788765567999999999999865

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=95.90  E-value=0.0025  Score=40.63  Aligned_cols=35  Identities=9%  Similarity=-0.108  Sum_probs=25.6

Q ss_pred             CCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.  +.+||......|+.|+||.|||..+.
T Consensus        21 ~~Gd~i~v~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   57 (60)
T 1i07_A           21 MKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMR   57 (60)
T ss_dssp             CTTCEEEECGGGCCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             CCCCEEEEEEcCCCeEEEEECCCCEEEEEHHHeEEcc
Confidence            346665543  46788655556999999999998865

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.86  E-value=0.011  Score=39.91  Aligned_cols=36  Identities=3%  Similarity=-0.133  Sum_probs=26.6

Q ss_pred             CCCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..+.|+...+.     |.+||... ..|++|+||.|||..++
T Consensus        35 s~~~Gd~i~v~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   75 (81)
T 1x43_A           35 SLLADEVITVFSVVGMDSDWLMGE-RGNQKGKVPITYLELLN   75 (81)
T ss_dssp             CCCTTCEEEEECCTTCCTTEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             CCCCCCEEEEEEcCCCCCCcEEEE-ECCCEEEEehHHEEECC
Confidence            34567776653     45787644 67899999999999865

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=95.82  E-value=0.0089  Score=41.28  Aligned_cols=36  Identities=11%  Similarity=0.098  Sum_probs=27.1

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+.     +.+||......|++|+||.|||..++
T Consensus        36 ~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   76 (91)
T 1wx6_A           36 FEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   76 (91)
T ss_dssp             CCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEE
T ss_pred             CCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECC
Confidence            4567776653     45788655566999999999999876

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=95.82  E-value=0.005  Score=40.63  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=25.3

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~   67 (196)
                      .+.|+.+.+.   |.+||.... ..|++|+||.|||.++
T Consensus        34 ~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           34 FHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             BCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEEC
Confidence            4556666643   467876443 5899999999999874

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=95.76  E-value=0.0037  Score=40.89  Aligned_cols=35  Identities=9%  Similarity=0.074  Sum_probs=26.1

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   |.+||......|+.|+||.|||.+..
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A           26 HRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             CCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            446665543   56788766668999999999998854

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=95.75  E-value=0.0031  Score=41.55  Aligned_cols=36  Identities=14%  Similarity=0.087  Sum_probs=25.0

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.    +.+||......|++|+||.|||.+.+
T Consensus        30 ~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           30 FCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             BCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred             CCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence            3456666643    45788655458999999999998754

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.70  E-value=0.0097  Score=39.19  Aligned_cols=35  Identities=17%  Similarity=0.159  Sum_probs=25.1

Q ss_pred             CCCCccee---cCCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .|.+||... ...|+.|+||.|||..++
T Consensus        28 ~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   66 (71)
T 2gqi_A           28 LKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVS   66 (71)
T ss_dssp             CTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEECC
T ss_pred             CCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEECC
Confidence            34555443   467787644 477999999999999865

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=95.68  E-value=0.007  Score=41.57  Aligned_cols=34  Identities=9%  Similarity=0.024  Sum_probs=25.6

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++   |.+||.. ...|+.|+||.|||...+
T Consensus        37 ~~Gd~i~Vl~~~~~gWw~g-~~~g~~G~~P~~yv~~~~   73 (83)
T 1neg_A           37 KKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLA   73 (83)
T ss_dssp             CTTCEEEEEECCSSSEEEE-EETTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEecCCCEEEE-EECCeEEEEEHHHEEECC
Confidence            456666643   5678864 567899999999999865

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=95.66  E-value=0.0056  Score=38.59  Aligned_cols=34  Identities=15%  Similarity=0.181  Sum_probs=24.4

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +++||.... .|++|+||.|||..++
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A           21 RSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEECCCCEEEEEE-CCeEEEeeHHHeEEcc
Confidence            456666643   567876444 7999999999998753

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=95.63  E-value=0.011  Score=39.03  Aligned_cols=36  Identities=8%  Similarity=-0.057  Sum_probs=26.4

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.  +++||......|++|+||.|||...+
T Consensus        26 ~~~Gd~i~v~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (72)
T 2jw4_A           26 IKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKN   63 (72)
T ss_dssp             CCTTCEEEEEECSSSSEEEECTTSCEEEECTTSCEECC
T ss_pred             CCCCCEEEEEECCCCEEEEEECCCCEEEEEhhHEEEcC
Confidence            3456666643  45788655447999999999999865

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=95.60  E-value=0.0037  Score=39.97  Aligned_cols=34  Identities=9%  Similarity=0.073  Sum_probs=23.7

Q ss_pred             CCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.    |.+|+... ..|++|+||.|||.+++
T Consensus        25 ~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A           25 TKGEKLRVLGYNHNGEWCEAQ-TKNGQGWVPSAYITPVN   62 (63)
T ss_dssp             CTTCEEEEEEECTTSSEEEEE-ETTEEEEEEGGGEEESC
T ss_pred             CCCCEEEEEEeCCCCCeEEEE-ECCCeEEEehHHeEECC
Confidence            456766644    34466543 37899999999998854

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=95.60  E-value=0.0068  Score=38.02  Aligned_cols=33  Identities=9%  Similarity=0.003  Sum_probs=23.9

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.   +.+||......|+.|+||.|||.+
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~   56 (57)
T 1cka_A           21 KKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEE
Confidence            456666643   467886554569999999999975

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=95.60  E-value=0.0066  Score=40.19  Aligned_cols=35  Identities=11%  Similarity=0.117  Sum_probs=25.0

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++    +.+||... ..|+.|+||.|||..++
T Consensus        29 f~~Gd~i~v~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   67 (72)
T 1ugv_A           29 FTAGTVFDNVHPSQEPGWLEGT-LNGKTGLIPENYVEFLS   67 (72)
T ss_dssp             BCTTCEEBSCCBCSSTTEEEEE-SSSCEEEEEGGGEEECC
T ss_pred             CcCCCEEEEEEecCCCCeEEEE-ECCcEEEecHHHEEECC
Confidence            3456666543    45677643 67999999999999865

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=95.59  E-value=0.006  Score=39.72  Aligned_cols=34  Identities=9%  Similarity=-0.008  Sum_probs=25.2

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.   |++||......|++|+||.|||...
T Consensus        23 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   59 (65)
T 1b07_A           23 KKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY   59 (65)
T ss_dssp             CTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred             cCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeec
Confidence            456666643   4678875545699999999999874

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=95.56  E-value=0.0023  Score=45.94  Aligned_cols=36  Identities=3%  Similarity=-0.069  Sum_probs=26.3

Q ss_pred             CCCCCcceecC---CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD---PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d---p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|..+.|++   -+||-.+++.|+-||||.|||+..+
T Consensus        60 fkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d   98 (102)
T 1ri9_A           60 VKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADND   98 (102)
T ss_dssp             CCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC--
T ss_pred             cCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhcccc
Confidence            34466665433   3699889999999999999998765

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=95.56  E-value=0.0064  Score=38.24  Aligned_cols=33  Identities=21%  Similarity=0.200  Sum_probs=24.0

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.   +++||.... .|++|+||.|||..+
T Consensus        22 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A           22 RRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEcCCCCEEEEEE-CCcEEEEchHHeEEC
Confidence            446666643   457876444 899999999999874

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.53  E-value=0.016  Score=38.58  Aligned_cols=36  Identities=11%  Similarity=0.051  Sum_probs=26.7

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.    +.+||......|+.|+||.|||..+.
T Consensus        29 ~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~   68 (77)
T 2enm_A           29 VTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILP   68 (77)
T ss_dssp             CCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEEC
T ss_pred             CCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECC
Confidence            4557776643    46788655457999999999999865

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.49  E-value=0.035  Score=38.05  Aligned_cols=35  Identities=9%  Similarity=-0.078  Sum_probs=25.3

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |.+||... ..|+.|+||.|||....
T Consensus        36 f~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   73 (88)
T 1x2q_A           36 FKHGEIIIVLDDSDANWWKGE-NHRGIGLFPSNFVTTNL   73 (88)
T ss_dssp             CCSSCEEEEEECSCSSSEEEE-ETTEEEEECGGGEESCS
T ss_pred             CCCCCEEEEEEeCCCCEEEEE-ECCcEEEEehHHEEEcC
Confidence            4567776653   45788643 34889999999998865

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=95.48  E-value=0.0092  Score=38.56  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=25.2

Q ss_pred             CCCCccee---cCCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .|.+||... ...|+.|+||.|||..++
T Consensus        26 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A           26 LKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             CTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            45666554   356787643 467999999999998754

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=95.48  E-value=0.0068  Score=38.96  Aligned_cols=34  Identities=15%  Similarity=0.089  Sum_probs=24.9

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      .+.|+...+.     +.+||... ..|++|+||.|||..+
T Consensus        25 ~~~Gd~i~v~~~~~~~~~W~~g~-~~g~~G~~P~~yv~~l   63 (64)
T 2jte_A           25 FREGEIIHLISKETGEAGWWKGE-LNGKEGVFPDNFAVQI   63 (64)
T ss_dssp             BCTTCEEEEEESCSSSTTEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             CCCCCEEEEEECCCCCCCEEEEE-ECCeEEEEeHHHEEEC
Confidence            3557776654     45787644 4789999999999864

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.42  E-value=0.03  Score=39.21  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=26.7

Q ss_pred             CCCCCCcceec---C-CccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIA---D-PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~---d-p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++.|+...++   | .+||.... .|+.|+||.|||..+.
T Consensus        43 sf~~Gd~i~vl~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   82 (97)
T 2csq_A           43 PFKEGQIIKVYGDKDADGFYRGET-CARLGLIPCNMVSEIQ   82 (97)
T ss_dssp             CBCTTCEEEEEEEECTTCEEEEEE-TTEEEEEETTTSEECC
T ss_pred             CCCCCCEEEEEEecCCCCeEEEEE-CCcEEEEehHHeEECC
Confidence            35677877755   3 34776444 6999999999999876

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.41  E-value=0.021  Score=38.30  Aligned_cols=35  Identities=9%  Similarity=-0.067  Sum_probs=25.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||... ..|++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (79)
T 2yun_A           26 LEKGDIVIIHEKKEEGWWFGS-LNGKKGHFPAAYVEELP   63 (79)
T ss_dssp             BCTTCEEEEEECCSSSCEEEE-SSSCEEEECSTTEEEES
T ss_pred             CCCCCEEEEEEcCCCCEEEEE-ECCCEEEEEhHHeEECC
Confidence            3456666643   45687644 57899999999999876

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.40  E-value=0.0048  Score=41.94  Aligned_cols=36  Identities=11%  Similarity=0.021  Sum_probs=26.0

Q ss_pred             CCCCCcceecC----Cccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD----PGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d----p~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+.+.+.+    ++||.... ..|++|+||.|||.+.+
T Consensus        36 f~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           36 FRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             BCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            45677777533    36876543 47999999999999854

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=95.39  E-value=0.0078  Score=40.72  Aligned_cols=35  Identities=3%  Similarity=-0.140  Sum_probs=25.0

Q ss_pred             CCCCCcceec---CCc-cccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPG-VASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~-~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |.+ ||.. ...|++|+||.|||..+.
T Consensus        29 f~~Gd~i~v~~~~~~~gWw~g-~~~g~~G~fP~~yv~~~~   67 (80)
T 2i0n_A           29 FKRNDIITITFKDQENKWFMG-QLNGKEGSFPVDHVEILL   67 (80)
T ss_dssp             BCSSEEEEEEEESSSSSEEEE-EETTEEEEEEGGGEEEES
T ss_pred             CCCCCEEEEEEecCCCCEEEE-EECCcEEEechHHEEECC
Confidence            3456666543   455 7754 467899999999999876

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.39  E-value=0.004  Score=41.95  Aligned_cols=36  Identities=6%  Similarity=-0.078  Sum_probs=26.0

Q ss_pred             CCCCCcceec---C-CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---D-PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---d-p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++   | .+||......|++|+||.|||...+
T Consensus        32 ~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   71 (78)
T 2dl5_A           32 IEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPT   71 (78)
T ss_dssp             BCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSC
T ss_pred             CCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECC
Confidence            3456666542   3 6788755556999999999998865

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=95.35  E-value=0.0082  Score=38.15  Aligned_cols=33  Identities=9%  Similarity=0.030  Sum_probs=23.8

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.   +++||... ..|++|+||.|||.++
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~~~-~~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A           26 KKGDILTLLNSTNKDWWKIE-VNGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEeEecCCCeEEEE-ECCEEEEEEHHHEEEC
Confidence            446665543   46787644 4789999999999874

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.34  E-value=0.0071  Score=40.40  Aligned_cols=35  Identities=14%  Similarity=0.074  Sum_probs=25.4

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+...++    +.+||.... .|+.|+||+|||..+.
T Consensus        33 f~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A           33 LRAGDVVMVYGPMDDQGFYYGEL-GGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             BCTTCEEEEESCCCTTCEEEEES-SSCEEEEETTTEEECC
T ss_pred             ECCCCEEEEeEccCCCCEEEEEE-CCcEEEEChHHeEEcc
Confidence            3557776654    356876444 7999999999998854

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.33  E-value=0.015  Score=37.80  Aligned_cols=35  Identities=11%  Similarity=-0.042  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||.... .|++|+||.|||....
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1x2k_A           26 FEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAEQS   63 (68)
T ss_dssp             CCSSCEEEEEECSCSSEEEEES-SSCEEEEETTTEEECC
T ss_pred             CCCCCEEEEEEcCCCCEEEEEE-CCcEEEEehHHeEEcC
Confidence            3456766643   467876544 7899999999999864

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.32  E-value=0.018  Score=38.83  Aligned_cols=34  Identities=6%  Similarity=-0.080  Sum_probs=24.8

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++   +.+||... ..|++|+||.|||..+.
T Consensus        28 ~~Gd~i~vl~~~~~gWw~g~-~~g~~G~~P~~yv~~~~   64 (80)
T 2ekh_A           28 PAGVEVQVLEKQESGWWYVR-FGELEGWAPSHYLVLDE   64 (80)
T ss_dssp             CTTCEEEEEEECTTSEEEEE-ETTEEEEEETTTEECCC
T ss_pred             CCCCEEEEEEeCCCCeEEEE-ECCCEEEEEhHHeEECC
Confidence            456666643   45787644 45899999999999866

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.31  E-value=0.0075  Score=39.52  Aligned_cols=36  Identities=8%  Similarity=0.082  Sum_probs=25.7

Q ss_pred             CCCCCcceecC----CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD----PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d----p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+++    .+||......|++|+||.|||....
T Consensus        26 ~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct4_A           26 MAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS   65 (70)
T ss_dssp             BCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcC
Confidence            35577766533    3477655557999999999998855

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=95.30  E-value=0.0084  Score=37.78  Aligned_cols=32  Identities=9%  Similarity=0.090  Sum_probs=23.4

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .+++||.... .|+.|+||.|||.+
T Consensus        22 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   56 (58)
T 1zx6_A           22 KPGDKVQLLEKLSPEWYKGSC-NGRTGIFPANYVKP   56 (58)
T ss_dssp             CTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCcEEEeeHHHEEE
Confidence            44666554   3567876443 79999999999986

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=95.27  E-value=0.0096  Score=38.64  Aligned_cols=34  Identities=6%  Similarity=0.056  Sum_probs=24.3

Q ss_pred             CCCCcceec----CCcccccc-ccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA----DPGVASRG-LSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~-~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.    +.+||... ...|+.|++|.|||..+
T Consensus        28 ~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A           28 KEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            456776654    35687543 35899999999999864

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=95.25  E-value=0.0088  Score=39.44  Aligned_cols=34  Identities=12%  Similarity=0.039  Sum_probs=25.1

Q ss_pred             CCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.     +.+||... ..|++|+||.|||....
T Consensus        22 ~~Gd~i~vl~~~~~~~gWw~g~-~~g~~G~~P~~yV~~~~   60 (69)
T 2ydl_A           22 KEGDIVTLINKDCIDVGWWEGE-LNGRRGVFPDNFVKLLP   60 (69)
T ss_dssp             CTTCEEEEEESCCSSTTEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEcCCCCCCEEEEE-ECCcEEEecHHHEEECC
Confidence            457776643     56787644 47999999999999855

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.24  E-value=0.018  Score=37.67  Aligned_cols=35  Identities=14%  Similarity=-0.062  Sum_probs=25.7

Q ss_pred             CCCCCcceec------CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA------DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~------dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.      +.+||... ..|+.|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   66 (71)
T 2cre_A           26 FSRGDILTILEQHVPESEGWWKCL-LHGRQGLAPANRLQILS   66 (71)
T ss_dssp             CCSSCCEEEEESCCTTSTTEEEEE-SSSCCEEEETTTEEECC
T ss_pred             CCCCCEEEEeEcCCCCCCCcEEEE-ECCCEEEEehHHEEECC
Confidence            4557766642      56787644 57999999999999865

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=95.24  E-value=0.0092  Score=38.09  Aligned_cols=34  Identities=21%  Similarity=0.078  Sum_probs=23.7

Q ss_pred             CCCCccee---cCCccccccc-cCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGL-SLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~-~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+.+||.... ..|++|+||.|||..+
T Consensus        26 ~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A           26 RDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             CTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEEC
Confidence            34555543   3567876444 3899999999999874

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=95.23  E-value=0.0091  Score=37.84  Aligned_cols=32  Identities=13%  Similarity=0.060  Sum_probs=23.2

Q ss_pred             CCCCcceec-----CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.     +.+||.... .|+.|+||.|||..
T Consensus        23 ~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   59 (60)
T 1oot_A           23 RKGDVITILKKSDSQNDWWTGRV-NGREGIFPANYVEL   59 (60)
T ss_dssp             CTTCEEEEEECCSCTTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             cCCCEEEEEEeCCCCCCeEEEEE-CCEEEEEeHHHEEE
Confidence            456666643     467876444 78999999999975

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=95.20  E-value=0.0086  Score=40.14  Aligned_cols=35  Identities=9%  Similarity=-0.054  Sum_probs=25.4

Q ss_pred             CCCCCcceec----CCccccccc-cCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA----DPGVASRGL-SLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~-~~g~~G~vP~nyv~~~   67 (196)
                      ++.|+...++    +.+||.... ..|+.|++|.|||.+.
T Consensus        37 f~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~   76 (78)
T 1k1z_A           37 LNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   76 (78)
T ss_dssp             BCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEES
T ss_pred             CCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            3557776642    567886443 6899999999999873

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=95.19  E-value=0.016  Score=38.59  Aligned_cols=35  Identities=11%  Similarity=-0.038  Sum_probs=24.6

Q ss_pred             CCCCccee---cCCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||.... ..|+.|+||.|||+...
T Consensus        25 ~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~   63 (73)
T 2lcs_A           25 AEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ   63 (73)
T ss_dssp             CTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECC
T ss_pred             cCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECC
Confidence            44666554   4557876444 35899999999999865

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=95.17  E-value=0.011  Score=38.69  Aligned_cols=35  Identities=9%  Similarity=-0.038  Sum_probs=25.3

Q ss_pred             CCCCCcceec----CCcccccc-ccCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA----DPGVASRG-LSLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~-~~~g~~G~vP~nyv~~~   67 (196)
                      .+.|+...+.    |.+||..+ ...|+.|++|+|||.+.
T Consensus        29 f~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~   68 (70)
T 1gcq_C           29 LNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (70)
T ss_dssp             BCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             cCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEEC
Confidence            3557776643    45787543 67799999999999873

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=95.16  E-value=0.012  Score=37.10  Aligned_cols=33  Identities=9%  Similarity=-0.004  Sum_probs=23.6

Q ss_pred             CCCCccee----cCCccccccc-cCCCcceeeccceEe
Q psy13388         34 RLGPGYSI----ADPGVASRGL-SLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~----~dp~~~~~~~-~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+    .+++||.... ..|++|+||.|||..
T Consensus        22 ~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~   59 (60)
T 2v1q_A           22 KSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP   59 (60)
T ss_dssp             CTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEE
Confidence            45666664    2567875443 579999999999975

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=95.15  E-value=0.012  Score=38.36  Aligned_cols=36  Identities=6%  Similarity=-0.055  Sum_probs=26.8

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++  +.+||......|++|+||.|||..++
T Consensus        26 ~~~Gd~i~v~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxt_A           26 VVQGEKLEVLDHSKRWWLVKNEAGRSGYIPSNILEPLS   63 (68)
T ss_dssp             BCTTCEEEEEECSSSEEEEECTTSCEEEEEGGGEECCC
T ss_pred             CCCCCEEEEEEcCCCEEEEEECCCCEEEEEhHHcEECC
Confidence            3456666643  46788755578999999999999865

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=95.14  E-value=0.01  Score=37.41  Aligned_cols=32  Identities=16%  Similarity=0.052  Sum_probs=23.2

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.   +++||... ..|+.|+||.|||.+
T Consensus        23 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~   57 (58)
T 1zlm_A           23 EEGDIIYITDMSDTNWWKGT-SKGRTGLIPSNYVAE   57 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEE
T ss_pred             CCCCEEEEEEeCCCCEEEEE-ECCCEEEEehHHEEe
Confidence            446666643   46787644 378999999999975

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.13  E-value=0.0095  Score=39.40  Aligned_cols=35  Identities=11%  Similarity=-0.074  Sum_probs=26.0

Q ss_pred             CCCCCcceec------CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA------DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~------dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++      +.+||... ..|++|+||.|||..+.
T Consensus        27 f~~Gd~i~v~~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   67 (73)
T 2dl7_A           27 FPEGAIIRILNKENQDDDGFWEGE-FNGRIGVFPSVLVEELS   67 (73)
T ss_dssp             BCTTCEEEEEECCCSSSSSCEEEE-ETTEEEEECSSSEEECC
T ss_pred             CCCCCEEEEEECCCCCCCCcEEEE-ECCCEEEEChHHEEECC
Confidence            3557776643      45687644 67899999999999865

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=95.12  E-value=0.011  Score=38.03  Aligned_cols=34  Identities=9%  Similarity=-0.170  Sum_probs=24.2

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      .+.|+...+.   |.+||... ..|++|+||.|||..+
T Consensus        28 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B           28 FDPDDIITNIEMIDDGWWRGV-CKGRYGLFPANYVELR   64 (65)
T ss_dssp             BCTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             EecCCEEEEEEecCCCEEEEE-ECCcEEEEehHHeEEC
Confidence            3456666543   46787644 5789999999999874

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=95.11  E-value=0.013  Score=37.37  Aligned_cols=34  Identities=9%  Similarity=0.040  Sum_probs=24.5

Q ss_pred             CCCCccee---cCCcccccc-ccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+.+||... ...|+.|++|.|||.++
T Consensus        23 ~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~   60 (62)
T 2fpe_A           23 EVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEV   60 (62)
T ss_dssp             CTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEEC
Confidence            44666554   456787643 37899999999999874

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.10  E-value=0.021  Score=37.17  Aligned_cols=35  Identities=11%  Similarity=0.039  Sum_probs=25.7

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||... ..|++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (68)
T 2dl4_A           26 MRPGDIITLLEDSNEDWWKGK-IQDRIGFFPANFVQRLS   63 (68)
T ss_dssp             CCTTCEEEEEECCCSSEEEEE-CSSCEEEEETTTEEECC
T ss_pred             CCCCCEEEEEEeCCCCEEEEE-ECCcEEEEehHHeEECC
Confidence            3557766643   45687644 57899999999999865

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=95.08  E-value=0.013  Score=37.35  Aligned_cols=34  Identities=12%  Similarity=0.064  Sum_probs=24.2

Q ss_pred             CCCCCcceec--CCccccccc-cCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA--DPGVASRGL-SLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~-~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...+.  +.+||.... ..|++|+||.|||.+
T Consensus        25 ~~~Gd~i~v~~~~~~Ww~g~~~~~g~~G~~P~~yv~~   61 (62)
T 2iim_A           25 FEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             BCTTCEEEEEECCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCCEEEEEEcCCCEEEEEECCCCCEEEEEHHHEEE
Confidence            3456666643  347876443 689999999999976

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=95.07  E-value=0.011  Score=38.04  Aligned_cols=34  Identities=9%  Similarity=0.018  Sum_probs=25.2

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||.. ...|++|+||.|||....
T Consensus         9 ~~Gd~i~v~~~~~~~Ww~g-~~~g~~G~~P~~yv~~~~   45 (63)
T 1tuc_A            9 KKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD   45 (63)
T ss_dssp             CTTCEEEEEECCSSSEEEE-EETTEEEEEEGGGEEECS
T ss_pred             CCCCEEEEEEecCCCEEEE-EECCcEEEEeHHHEEEcC
Confidence            456766643   4568764 467899999999999865

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=95.07  E-value=0.011  Score=41.02  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=25.1

Q ss_pred             CCCCCcceec--------CCccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA--------DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~--------dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...++        +.+||......|++|+||.|||.+
T Consensus        48 f~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           48 LRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             BCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC
T ss_pred             cCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCcC
Confidence            4567776643        567887555479999999999963

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.07  E-value=0.014  Score=38.57  Aligned_cols=35  Identities=14%  Similarity=0.003  Sum_probs=25.0

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++     |++||... ..|++|+||.|||....
T Consensus        26 ~~~Gd~i~v~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   65 (73)
T 2dm1_A           26 LREGDVVRIYSRIGGDQGWWKGE-TNGRIGWFPSTYVEEEG   65 (73)
T ss_dssp             BCTTCEEECCBSSSSSSSCEEEE-ETTEEEEECSSSEEECC
T ss_pred             CCCCCEEEEEEecCCCCCeEEEE-ECCeEEEeehHHEEEcC
Confidence            3456666643     44787644 47899999999999865

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=95.03  E-value=0.014  Score=38.20  Aligned_cols=35  Identities=11%  Similarity=0.020  Sum_probs=25.5

Q ss_pred             CCCCcceec----CCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA----DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.    +.+||.... ..|+.|+||.|||..++
T Consensus        26 ~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (71)
T 2jt4_A           26 KSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVR   65 (71)
T ss_dssp             CTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECC
Confidence            456666642    567876443 57999999999999865

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=95.02  E-value=0.01  Score=38.54  Aligned_cols=34  Identities=15%  Similarity=0.126  Sum_probs=25.3

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .|++||......|+.|+||.|||...
T Consensus        22 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A           22 ERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             CTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred             CcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence            45666664   34678875545799999999999885

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=95.00  E-value=0.014  Score=39.08  Aligned_cols=34  Identities=6%  Similarity=-0.058  Sum_probs=24.8

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...+.   |.+||......|++|+||.|||.+
T Consensus        39 ~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           39 LRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   75 (77)
T ss_dssp             BCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCC
T ss_pred             CCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEE
Confidence            3456666544   357887655679999999999976

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=94.97  E-value=0.035  Score=37.20  Aligned_cols=36  Identities=11%  Similarity=0.026  Sum_probs=24.8

Q ss_pred             CCCCCccee---cCCccccccc-cC---CCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGL-SL---AEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~-~~---g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||.... ..   +++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~   68 (80)
T 1ue9_A           26 LAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG   68 (80)
T ss_dssp             CCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECC
T ss_pred             CCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECC
Confidence            345776664   3467875433 33   489999999999876

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.96  E-value=0.0088  Score=39.07  Aligned_cols=36  Identities=11%  Similarity=-0.028  Sum_probs=25.3

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||......+++|+||.|||..++
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~   64 (69)
T 2eqi_A           26 FCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDIS   64 (69)
T ss_dssp             BCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECC
T ss_pred             CCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECc
Confidence            3456666644   45788755555556999999999865

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=94.95  E-value=0.013  Score=36.86  Aligned_cols=34  Identities=6%  Similarity=-0.215  Sum_probs=23.7

Q ss_pred             CCCCccee---cCCcccccc-ccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .|.+||... ..+|++|+||.|||..+
T Consensus        20 ~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A           20 VENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEEC
Confidence            45666654   345777543 34599999999999864

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=94.94  E-value=0.015  Score=38.08  Aligned_cols=35  Identities=6%  Similarity=-0.023  Sum_probs=25.5

Q ss_pred             CCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.  +.+||......|+.|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (70)
T 2vkn_A           27 EQNEILQVSDIEGRWWKARRANGETGIIPSNYVQLID   63 (70)
T ss_dssp             CTTCEEEEECTTSSEEEEECTTSCEEEEEGGGEEEEE
T ss_pred             CCCCEEEEEEcCCCeEEEEECCCCEEEEehHHEEECC
Confidence            446665543  46788655558999999999998865

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=94.89  E-value=0.012  Score=38.65  Aligned_cols=36  Identities=6%  Similarity=0.021  Sum_probs=25.7

Q ss_pred             CCCCCcceec----CCccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++    +.+||.... ..|+.|+||.|||..+.
T Consensus        27 ~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   67 (72)
T 1spk_A           27 FAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             BCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             CCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            3557777754    346775433 35999999999999865

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.88  E-value=0.01  Score=38.79  Aligned_cols=35  Identities=3%  Similarity=-0.135  Sum_probs=25.9

Q ss_pred             CCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.  +.+||......|++|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A           27 LKDEVLEVLEDGRQWWKLRSRSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             CTTCEEEEEECSSSEEEEECTTSCEEEEETTTCCBCC
T ss_pred             CCCCEEEEEEcCCCEEEEEECCCCEEEEEHHHeEECC
Confidence            456666643  35788765567999999999998754

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=94.82  E-value=0.014  Score=38.23  Aligned_cols=34  Identities=15%  Similarity=0.156  Sum_probs=24.8

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .|.+||... ..|++|+||.|||....
T Consensus        23 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   59 (68)
T 2ew3_A           23 KEGDIITLTNQIDENWYEGM-IHGESGFFPINYVEVIV   59 (68)
T ss_dssp             CTTCEEEEEEESSSSEEEEE-ETTEEEEEEGGGEEESC
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCcEEEeeHHHEEEcC
Confidence            45666664   356787644 47999999999999855

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=94.81  E-value=0.012  Score=36.96  Aligned_cols=33  Identities=15%  Similarity=0.170  Sum_probs=23.6

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+++||.... .|+.|+||.|||..+
T Consensus        22 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1sem_A           22 KRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCcEEEechHHeEEC
Confidence            45666654   3457876444 689999999999864

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=94.80  E-value=0.011  Score=39.79  Aligned_cols=36  Identities=14%  Similarity=0.095  Sum_probs=25.6

Q ss_pred             CCCCCcceec---CC-----ccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DP-----GVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp-----~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   |.     +||......|+.|+||.|||..+.
T Consensus        34 ~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           34 LKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             BCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC-
T ss_pred             CCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcC
Confidence            3556666643   33     788755557999999999998854

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=94.80  E-value=0.018  Score=37.56  Aligned_cols=35  Identities=11%  Similarity=0.096  Sum_probs=24.9

Q ss_pred             CCCCcceec---CCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ..+|++|+||.|||...+
T Consensus        23 ~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   61 (69)
T 1ruw_A           23 KKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYK   61 (69)
T ss_dssp             CTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcC
Confidence            456666643   55787543 445999999999999865

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=94.80  E-value=0.015  Score=37.71  Aligned_cols=35  Identities=6%  Similarity=-0.013  Sum_probs=25.2

Q ss_pred             CCCCcceecC---CccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIAD---PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~d---p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+..   .+||......|++|+||.|||..++
T Consensus        30 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           30 KKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             CCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            4566666443   4688655467999999999998754

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=94.79  E-value=0.019  Score=37.94  Aligned_cols=34  Identities=12%  Similarity=0.114  Sum_probs=24.4

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   |.+||... ..|++|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (73)
T 2dbm_A           27 KEGDIITLTNQIDENWYEGM-LHGHSGFFPINYVEILV   63 (73)
T ss_dssp             CTTCEEECCBCSSSSEEEEE-ETTEEEEEESSSEEESS
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCCEEEechHHEEEcc
Confidence            456665543   45677644 47899999999999865

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=94.79  E-value=0.014  Score=38.55  Aligned_cols=34  Identities=9%  Similarity=0.018  Sum_probs=25.1

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||.. ...|++|+||.|||..++
T Consensus        19 ~~Gd~i~v~~~~~~~Ww~g-~~~g~~G~~P~~yv~~~~   55 (73)
T 2kxd_A           19 KKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD   55 (73)
T ss_dssp             CTTCEEEEEECCSSSEEEE-EETTEEEEEEGGGEEECC
T ss_pred             cCCCEEEEEEecCCCEEEE-EECCCEEEEehHHeEEcC
Confidence            446666643   4668764 367899999999999865

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.78  E-value=0.015  Score=39.21  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=26.4

Q ss_pred             CCCCCcceec--CCcccccc-ccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++  |.+||... ...|++|+||.|||.++.
T Consensus        36 ~~~Gd~i~v~~~~~~Ww~~~~~~~g~~G~~P~~yv~~~~   74 (79)
T 2cud_A           36 FRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVS   74 (79)
T ss_dssp             SCTTCEEEEEEEETTEEEEEETTTCCEEEEEGGGEEEEC
T ss_pred             CCCCCEEEEEecCCCeEEEEECCCCCEEEeeHHHeEEcc
Confidence            4567776654  35687544 456999999999999865

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=94.78  E-value=0.014  Score=36.77  Aligned_cols=34  Identities=12%  Similarity=0.104  Sum_probs=24.0

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+++||.... .|++|++|.|||..+.
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A           21 SVGEIITNIRKEDGGWWEGQI-NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CTTCEEEEEECCTTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEeCCCCEEEEEE-CCeEEEEehHHeEEcC
Confidence            44666553   3467876443 7999999999998753

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.74  E-value=0.022  Score=37.25  Aligned_cols=35  Identities=11%  Similarity=0.008  Sum_probs=25.4

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.     +.+||... ..|++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   65 (70)
T 2da9_A           26 IKEGDIVTLINKDCIDVGWWEGE-LNGRRGVFPDNFVKLLS   65 (70)
T ss_dssp             CCTTEEEEEEECCCSSTTEEEEE-CSSCEEEEEGGGEEECC
T ss_pred             EcCCCEEEEEECCCCCCCeEEEE-ECCcEEEechHHeEECC
Confidence            3556666642     56787644 47999999999999865

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=94.72  E-value=0.016  Score=37.18  Aligned_cols=34  Identities=9%  Similarity=0.093  Sum_probs=24.6

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ..|+.|+||.|||..+.
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A           26 SKGDVIHVTRVEEGGWWEGT-HNGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CTTCEEEEEECCTTSEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEeEecCCCEEEEE-ECCCEEEEehHHeEEcC
Confidence            456666643   46787644 47899999999998865

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=94.71  E-value=0.011  Score=38.83  Aligned_cols=35  Identities=11%  Similarity=0.108  Sum_probs=23.9

Q ss_pred             CCCCccee--cCCccccccc-c-CCCc---ceeeccceEecc
Q psy13388         34 RLGPGYSI--ADPGVASRGL-S-LAEQ---DFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~--~dp~~~~~~~-~-~g~~---G~vP~nyv~~~~   68 (196)
                      +.|+...+  .+.+||.... . .|++   |+||.|||.+.+
T Consensus        30 ~~Gd~i~v~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           30 RAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CTTCCEEEEEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CCCCEEEEeeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            44555554  3567875433 3 4899   999999998754

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=94.71  E-value=0.02  Score=52.53  Aligned_cols=65  Identities=25%  Similarity=0.326  Sum_probs=44.9

Q ss_pred             cCCHHHHHHHHhCCCCceEEEeeC---CCCCeEEEeeeC---C-cceEEEEEEecCCeEEecCCCcCCCHHHHHHHHh
Q psy13388        112 RMSRAQAEALLSGRPDGTFLIRPS---TTGQYALSIVCS---G-APKHCLVYETERGFGFAEPFNIYPSLGALVLHYA  182 (196)
Q Consensus       112 ~isR~eAe~lL~~~~~G~FLVR~S---~~g~y~LSvr~~---~-~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY~  182 (196)
                      .|+|++|+.+|++.++|+||+|-|   ..|.++++....   + .++++.|..-.      ..+-.=-+|.|.|..|+
T Consensus       446 FIsK~~a~~lL~~~~~GTFLLRFSdS~~~GgITia~V~~~~~~~~~~v~~v~P~T------~kdl~~~sL~d~i~d~~  517 (575)
T 1bf5_A          446 FISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYT------KKELSAVTFPDIIRNYK  517 (575)
T ss_dssp             CCCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECCCBC------HHHHHSSCHHHHHHTCC
T ss_pred             eecHHHHHHHHhCCCCCeEEEecCCCCCCCcEEEEEEecCCCCccceeEecCCCc------hhhhhhCCHHHHhhcch
Confidence            569999999999999999999988   588888888663   3 44455453311      10111236777777764

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=94.67  E-value=0.0099  Score=38.59  Aligned_cols=35  Identities=6%  Similarity=-0.002  Sum_probs=24.5

Q ss_pred             CCCCcceec----CCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA----DPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~----dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.    +.+||... ...|+.|+||.|||..++
T Consensus        27 ~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A           27 AQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            457776654    34677543 346999999999998753

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.67  E-value=0.018  Score=37.54  Aligned_cols=35  Identities=17%  Similarity=0.087  Sum_probs=25.0

Q ss_pred             CCCCccee---cCCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||.... ..|+.|+||.|||..++
T Consensus        27 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct3_A           27 REGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVS   65 (70)
T ss_dssp             CTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETT
T ss_pred             CCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECC
Confidence            44666554   3567876444 36899999999999865

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.65  E-value=0.046  Score=36.54  Aligned_cols=35  Identities=11%  Similarity=-0.012  Sum_probs=25.9

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||... ..|++|+||.|||..+.
T Consensus        36 f~~Gd~i~v~~~~~~gWw~g~-~~g~~G~~P~~yv~~~~   73 (78)
T 2ed0_A           36 FQEGAIIYVIKKNDDGWYEGV-MNGVTGLFPGNYVESIS   73 (78)
T ss_dssp             BCSSCEEEEEEECSSSEEEEE-ETTEEEEEETTSEEECS
T ss_pred             ccCCCEEEEEEeCCCCEEEEE-ECCcEEEeChHHEEEcC
Confidence            4567766643   45787644 67999999999999865

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=94.63  E-value=0.012  Score=40.76  Aligned_cols=36  Identities=14%  Similarity=0.095  Sum_probs=26.6

Q ss_pred             CCCCCcceec---CC-----ccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DP-----GVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp-----~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   |.     +||......|++|+||.|||..+.
T Consensus        34 f~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~   77 (92)
T 1jqq_A           34 LKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (92)
T ss_dssp             BCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECC
Confidence            4567766643   33     788755567999999999999865

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.57  E-value=0.071  Score=36.53  Aligned_cols=35  Identities=9%  Similarity=-0.028  Sum_probs=25.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||.... .|++|+||.|||..+.
T Consensus        36 ~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   73 (88)
T 2cub_A           36 LIKGTKVIVMEKCSDGWWRGSY-NGQVGWFPSNYVTEEG   73 (88)
T ss_dssp             CCTTEEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEEccCCCeEEEEE-CCcEEEEehHHEEECC
Confidence            4556666643   467886544 7899999999999865

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=94.56  E-value=0.016  Score=37.73  Aligned_cols=34  Identities=15%  Similarity=-0.023  Sum_probs=24.8

Q ss_pred             CCCCcceec------CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA------DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~------dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.      +.+||... ..|++|+||.|||....
T Consensus        23 ~~Gd~i~v~~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   62 (69)
T 1wyx_A           23 RKGDIMTVLEQDTQGLDGWWLCS-LHGRQGIVPGNRLKILV   62 (69)
T ss_dssp             CTTCEEEEEETTGGGCTTEEEEE-ETTEEEEEEGGGEEEEE
T ss_pred             cCCCEEEEeECCCCCCCCcEEEE-ECCcEEEechhhEEECC
Confidence            456666642      56787644 57899999999998865

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=94.55  E-value=0.018  Score=36.28  Aligned_cols=32  Identities=9%  Similarity=0.059  Sum_probs=23.0

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .+.+||... ..|++|+||.|||.+
T Consensus        24 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~   58 (59)
T 2g6f_X           24 SKGDVIHVTRVEEGGWWEGT-HNGRTGWFPSNYVRE   58 (59)
T ss_dssp             CTTCEEEEEEECTTSEEEEE-ETTEEEEEEGGGEEE
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCcEEEEeHHHEEE
Confidence            44666554   356787644 478999999999975

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=94.53  E-value=0.011  Score=37.82  Aligned_cols=34  Identities=12%  Similarity=0.099  Sum_probs=24.4

Q ss_pred             CCCCccee----cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI----ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~----~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+    .+.+||... ..|+.|++|.|||..+.
T Consensus        21 ~~Gd~i~v~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   58 (62)
T 2j6f_A           21 RVGEIIRNVKKLQEEGWLEGE-LNGRRGMFPDNFVKEIK   58 (62)
T ss_dssp             CTTCEEEEEEECSSTTEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             cCCCEEEEEEecCCCCEEEEE-ECCcEEEechHHEEECC
Confidence            44666553    356787644 57999999999998865

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=94.51  E-value=0.011  Score=37.09  Aligned_cols=32  Identities=13%  Similarity=0.112  Sum_probs=22.5

Q ss_pred             CCCCcceec---C-Ccccccccc-CCCcceeeccceE
Q psy13388         34 RLGPGYSIA---D-PGVASRGLS-LAEQDFLTMNCAL   65 (196)
Q Consensus        34 ~~~~~~~~~---d-p~~~~~~~~-~g~~G~vP~nyv~   65 (196)
                      +.|+...+.   + ++|+..... .|++|+||.|||.
T Consensus        21 ~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A           21 TPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            456666542   3 578764443 7999999999985

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=94.50  E-value=0.049  Score=37.68  Aligned_cols=36  Identities=17%  Similarity=0.074  Sum_probs=25.2

Q ss_pred             CCCCCcceecC-------CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD-------PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d-------p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+++       .+||......++.|+||.|||..+.
T Consensus        36 f~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~   78 (93)
T 1wxu_A           36 FRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILG   78 (93)
T ss_dssp             BCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECC
T ss_pred             cCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcC
Confidence            45677766533       4787655544459999999999876

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=94.49  E-value=0.019  Score=36.31  Aligned_cols=32  Identities=16%  Similarity=0.078  Sum_probs=23.0

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .+.+||.... .|++|+||.|||..
T Consensus        25 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   59 (60)
T 2xmf_A           25 NANDIIDIIKEDPSGWWTGRL-RGKQGLFPNNYVTK   59 (60)
T ss_dssp             CTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCEEEEEcHHHEEE
Confidence            44666553   3567876444 78999999999975

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=94.46  E-value=0.02  Score=35.77  Aligned_cols=33  Identities=12%  Similarity=0.101  Sum_probs=24.0

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+.+||.. ...|+.|++|.|||++.
T Consensus        21 ~~Gd~i~v~~~~~~~W~~g-~~~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A           21 VXGSRVTVMEXCSDGWWRG-SYNGQIGWFPSNYVLEE   56 (58)
T ss_dssp             CTTCEEEEEEECTTSEEEE-EETTEEEEEEGGGEEEC
T ss_pred             eCCCEEEEeEcCCCCEEEE-EECCcEEEEehHHEEEC
Confidence            34665553   35678764 67789999999999874

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=94.44  E-value=0.015  Score=36.40  Aligned_cols=32  Identities=13%  Similarity=0.143  Sum_probs=23.0

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.   +.+|+.... .|++|+||.|||..
T Consensus        23 ~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~   57 (58)
T 2drm_A           23 KEGDTIIVHQKDPAGWWEGEL-NGKRGWVPANYVQD   57 (58)
T ss_dssp             CTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEE
Confidence            446665543   467876444 78999999999975

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=94.44  E-value=0.02  Score=37.21  Aligned_cols=35  Identities=9%  Similarity=0.026  Sum_probs=25.5

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||. +...|+.|++|.|||..+.
T Consensus        22 f~~Gd~i~v~~~~~~~Ww~-g~~~g~~G~fP~~yv~~~~   59 (67)
T 2bzy_A           22 LEVGDIVKVTRMNINGQWE-GEVNGRKGLFPFTHVKIFD   59 (67)
T ss_dssp             BCTTCEEEEEEECSSSEEE-EEETTEEEEEEGGGEEECC
T ss_pred             cCCCCEEEEEEecCCCeEE-EEeCCcEEEEehHHeEECC
Confidence            345666664   3567885 3557999999999999865

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=94.44  E-value=0.021  Score=35.83  Aligned_cols=34  Identities=9%  Similarity=-0.059  Sum_probs=23.3

Q ss_pred             CCCCccee---cCCcccccccc-CCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLS-LAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~-~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+.+|+..... .|+.|+||.|||..+
T Consensus        21 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A           21 AEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             CTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            34665554   34568754443 589999999999864

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=94.42  E-value=0.02  Score=37.64  Aligned_cols=34  Identities=9%  Similarity=0.038  Sum_probs=25.0

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +++||... ..|++|+||.|||..+.
T Consensus        25 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   61 (73)
T 3thk_A           25 KKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKKLD   61 (73)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEECCCCCeEEEE-ECCcEEEEehHHeEECC
Confidence            456666643   46787644 56899999999999866

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=94.42  E-value=0.074  Score=45.29  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=38.0

Q ss_pred             ccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCc
Q psy13388        107 KTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGA  149 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~  149 (196)
                      .+=|. .|+-+||.+.|+.  .+.|+|++|-|  ..|.|+|+.....+
T Consensus       243 hpGy~aFlTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~  290 (329)
T 3bux_B          243 HPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADG  290 (329)
T ss_dssp             CTTBCTTCCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTS
T ss_pred             CcchhheeeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCC
Confidence            46688 9999999999997  79999999999  99999999987533

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.41  E-value=0.023  Score=37.80  Aligned_cols=36  Identities=8%  Similarity=-0.065  Sum_probs=24.9

Q ss_pred             CCCCCcceec---CCcccccccc---CCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLS---LAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~---~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||.....   .|++|+||.|||.+.+
T Consensus        28 ~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~   69 (75)
T 2egc_A           28 FQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKN   69 (75)
T ss_dssp             BCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECC
Confidence            3557766643   4568754433   3689999999999865

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=94.40  E-value=0.033  Score=36.07  Aligned_cols=34  Identities=9%  Similarity=-0.042  Sum_probs=24.8

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ..|+.|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   63 (68)
T 2dl3_A           27 QKGDIVYIYKQIDQNWYEGE-HHGRVGIFPRTYIELLS   63 (68)
T ss_dssp             CTTCEEEEEECCSTTEEEEE-CSSCEEEEETTTEEECC
T ss_pred             CCCCEEEEeEecCCCEEEEE-ECCCEEEEchHHEEECC
Confidence            456666643   45677644 57899999999999865

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=94.40  E-value=0.019  Score=37.28  Aligned_cols=34  Identities=12%  Similarity=0.035  Sum_probs=24.5

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .|.+||... ..|+.|+||.|||....
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~fP~~yv~~~~   57 (65)
T 2nwm_A           21 QKGDIVYIHKEVDKNWLEGE-HHGRLGIFPANYVEVLP   57 (65)
T ss_dssp             CTTCEEEEEECCTTTCEEEE-ETTEEEEECGGGEEECC
T ss_pred             cCCCEEEEEEecCCCEEEEE-ECCcEEEEehhhEEEcC
Confidence            44666554   346787644 67899999999999855

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.40  E-value=0.016  Score=38.63  Aligned_cols=35  Identities=11%  Similarity=0.001  Sum_probs=25.5

Q ss_pred             CCCCCcceecC---C-ccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD---P-GVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d---p-~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+++   + +||... ..|+.|+||.|||..+.
T Consensus        33 f~~Gd~i~v~~~~~~~gWw~g~-~~g~~G~~P~~yv~~~~   71 (76)
T 2csi_A           33 FCTGDIITVFGEIDEDGFYYGE-LNGQKGLVPSNFLEEVS   71 (76)
T ss_dssp             CCTTCEEEEESSCCSSSEEEEE-ETTEEEEEEGGGCCBCC
T ss_pred             CCCCCEEEEeEecCCCCeEEEE-ECCcEEEEehHHEEECC
Confidence            45677777653   3 577644 47899999999998765

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=94.39  E-value=0.02  Score=37.74  Aligned_cols=35  Identities=11%  Similarity=-0.005  Sum_probs=25.5

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.     +.+||... ..|+.|+||.|||..+.
T Consensus        28 ~~~Gd~i~v~~~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   67 (73)
T 2k9g_A           28 IKEGDIVTLINKDCIDVGWWEGE-LNGRRGVFPDNFVKLLP   67 (73)
T ss_dssp             BCTTCEEEEEECCSSSTTEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             ECCCCEEEEEECCCCCCCEEEEE-ECCeEEEEchHHEEECC
Confidence            3557766643     56787644 47999999999998865

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=94.33  E-value=0.042  Score=36.52  Aligned_cols=36  Identities=6%  Similarity=-0.051  Sum_probs=25.7

Q ss_pred             CCCCCcceec---CCccccccc--cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL--SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~--~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   |.+||....  ..|+.|+||.|||..+.
T Consensus        29 f~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~   69 (76)
T 2ed1_A           29 FIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILS   69 (76)
T ss_dssp             CCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECC
T ss_pred             cCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECC
Confidence            4567777754   456876443  24699999999999865

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.33  E-value=0.038  Score=36.86  Aligned_cols=35  Identities=9%  Similarity=-0.098  Sum_probs=25.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |.+||.. ...|++|+||.|||..++
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g-~~~g~~G~~P~~yv~~~~   63 (78)
T 2yuo_A           26 FRKNDIITIISQKDEHCWVG-ELNGLRGWFPAKFVEVLD   63 (78)
T ss_dssp             BCTTCEEEEEECCSSSEEEE-EETTEEEEEEGGGEEEEC
T ss_pred             CCCCCEEEEEEecCCCEEEE-EECCCEEEEehHHEEECC
Confidence            3557776653   4568763 356899999999999876

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=94.33  E-value=0.059  Score=43.53  Aligned_cols=37  Identities=8%  Similarity=-0.070  Sum_probs=27.4

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEeccC
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      .+.|+...+.   |.+||......|++|+||.|||++++.
T Consensus       155 f~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~  194 (230)
T 2dvj_A          155 FKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRP  194 (230)
T ss_dssp             CCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCS
T ss_pred             CcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCC
Confidence            4556666643   567887655679999999999998764

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=94.33  E-value=0.018  Score=36.72  Aligned_cols=33  Identities=6%  Similarity=-0.087  Sum_probs=23.9

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .+.+||... ..|+.|+||.|||..+
T Consensus        25 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~   60 (62)
T 1k4u_S           25 QEGDIILVLSKVNEEWLEGE-SKGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CSSCEEEEEEESSSSCEEEE-CSSCEEEECGGGCCCS
T ss_pred             CCCCEEEEEEeCCCCEEEEE-ECCcEEEEeHHHEEEC
Confidence            45666554   356787644 5799999999999764

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.33  E-value=0.024  Score=37.76  Aligned_cols=35  Identities=6%  Similarity=-0.101  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |.+||.... .|++|+||.|||..+.
T Consensus        29 ~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (76)
T 2epd_A           29 FRRGDVLRLHERASSDWWRGEH-NGMRGLIPHKYITLPA   66 (76)
T ss_dssp             ECTTCEEEEEEEEETTEEEEEE-TTEEEEEESSSEECCS
T ss_pred             CCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHEEEcC
Confidence            3456666643   467876444 7899999999999865

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.31  E-value=0.035  Score=35.95  Aligned_cols=35  Identities=9%  Similarity=-0.160  Sum_probs=25.2

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||... ..|++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (68)
T 1x2p_A           26 FLRGEKILILRQTTADWWWGE-RAGCCGYIPANHVGKHS   63 (68)
T ss_dssp             CCTTCEEEEEECCSSSEEEEE-CTTCCEEEESSSEECCC
T ss_pred             CCCCCEEEEEEcCCCCEEEEE-ECCeEEEEehHHeEECC
Confidence            4557766643   45687644 46899999999998755

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=94.29  E-value=0.024  Score=37.20  Aligned_cols=35  Identities=11%  Similarity=0.062  Sum_probs=25.1

Q ss_pred             CCCCccee---cCCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||... ...|+.|++|.|||..+.
T Consensus        26 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~   64 (71)
T 2fpf_A           26 EVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   64 (71)
T ss_dssp             CTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECC
Confidence            44666554   456787543 377999999999998865

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.26  E-value=0.069  Score=35.85  Aligned_cols=35  Identities=6%  Similarity=-0.059  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   |.+||.... .|++|+||.|||..+.
T Consensus        29 ~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (81)
T 2ysq_A           29 FKAGDVIKVLDASNKDWWWGQI-DDEEGWFPASFVRLWV   66 (81)
T ss_dssp             CCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEESS
T ss_pred             CCCCCEEEEEEEcCcCEEEEEE-CCCEEEechHHEEEcC
Confidence            4567776643   466876443 5899999999999865

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=94.26  E-value=0.012  Score=40.00  Aligned_cols=26  Identities=8%  Similarity=-0.086  Sum_probs=19.7

Q ss_pred             CCcccccc-ccCCCcceeeccceEecc
Q psy13388         43 DPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        43 dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +++||... ...|+.|++|.|||..+.
T Consensus        52 ~~gW~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A           52 EIGWLNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             HHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CCccEEEEeCCCCCEEEEehHHEEECC
Confidence            34788643 445999999999998754

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=94.25  E-value=0.021  Score=37.70  Aligned_cols=35  Identities=11%  Similarity=0.076  Sum_probs=25.5

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||... ..|+.|+||.|||....
T Consensus        32 ~~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   69 (73)
T 3c0c_A           32 FREGDLITLTNQIDENWYEGM-LHGQSGFFPLSYVQVLV   69 (73)
T ss_dssp             BCTTCEEEEEEECSSSEEEEE-ETTEEEEEEGGGEEEEE
T ss_pred             CcCCCEEEEEEecCCCEEEEE-ECCCEEEeChHHEEECC
Confidence            355666664   356787644 37999999999999865

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=94.25  E-value=0.02  Score=37.30  Aligned_cols=35  Identities=9%  Similarity=0.026  Sum_probs=25.0

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||.... .|+.|+||.|||..++
T Consensus        27 ~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   64 (69)
T 2dil_A           27 LSAGDILEVILEGEDGWWTVER-NGQRGFVPGSYLEKLS   64 (69)
T ss_dssp             BCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CCCCCEEEEEECCCCCEEEEEE-CCCEEEEehHHeEEcC
Confidence            3456666643   457876444 4999999999998765

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=94.23  E-value=0.025  Score=36.76  Aligned_cols=35  Identities=3%  Similarity=-0.164  Sum_probs=23.7

Q ss_pred             CCCCCccee---cCCcccccc-ccCC---CcceeeccceEec
Q psy13388         33 GRLGPGYSI---ADPGVASRG-LSLA---EQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~-~~~g---~~G~vP~nyv~~~   67 (196)
                      .+.|+...+   .|.+||... ...|   +.|+||.|||...
T Consensus        26 f~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A           26 FEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             BCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            345666664   456787533 3445   8999999999863

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=94.22  E-value=0.023  Score=37.07  Aligned_cols=35  Identities=9%  Similarity=0.042  Sum_probs=25.2

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||... ..|++|+||.|||..+.
T Consensus        32 ~~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   69 (72)
T 4glm_A           32 FEVGDKIRILATLEDGWLEGS-LKGRTGIFPYRFVKLCP   69 (72)
T ss_dssp             BCTTCEEEEEEECSTTEEEEE-ETTEEEEEEGGGEEEEC
T ss_pred             CCCCCEEEEEEccCCCEEEEE-ECCcEEEEChHHeEECC
Confidence            345666554   356787644 57899999999998865

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.22  E-value=0.023  Score=37.42  Aligned_cols=35  Identities=3%  Similarity=-0.089  Sum_probs=25.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||.... .|+.|+||.|||...+
T Consensus        28 ~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   65 (72)
T 2dl8_A           28 FKKGASLLLYQRASDDWWEGRH-NGIDGLIPHQYIVVQD   65 (72)
T ss_dssp             BCTTCEEEEEEEEETTEEEEEE-TTEEEEECSSSEEECC
T ss_pred             cCCCCEEEEEeecCCCEEEEEE-CCEEEEEchHHeEEcC
Confidence            3556666643   457876444 7899999999999865

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=94.20  E-value=0.023  Score=36.88  Aligned_cols=35  Identities=6%  Similarity=-0.072  Sum_probs=25.1

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||... ..|++|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (68)
T 2djq_A           26 FNKGDVILLRRQLDENWYQGE-INGVSGIFPASSVEVIS   63 (68)
T ss_dssp             CCTTCEEEEEECCCSSEEEEE-ETTEEEEEESSSEETTC
T ss_pred             CCCCCEEEEEEecCCCEEEEE-ECCcEEEeehHHEEEcC
Confidence            345666654   356787644 57899999999998765

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.18  E-value=0.032  Score=36.96  Aligned_cols=36  Identities=11%  Similarity=0.027  Sum_probs=25.3

Q ss_pred             CCCCCcceec---CCcccccccc-C-CCc------ceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLS-L-AEQ------DFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~-~-g~~------G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+.   +.+||..... . |+.      |+||.|||...+
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~   72 (77)
T 2d8j_A           26 FRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDS   72 (77)
T ss_dssp             BCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECC
T ss_pred             CCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcC
Confidence            3557776643   4578754433 3 888      999999999865

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=94.17  E-value=0.03  Score=36.21  Aligned_cols=35  Identities=11%  Similarity=0.198  Sum_probs=24.4

Q ss_pred             CCCCccee---cCCccccccc-cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||.... .+|+.|+||.|||..+.
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (67)
T 2o9s_A           26 RKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK   64 (67)
T ss_dssp             CTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred             CCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECC
Confidence            44666553   3567875433 35799999999998865

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=94.02  E-value=0.015  Score=38.02  Aligned_cols=34  Identities=9%  Similarity=-0.036  Sum_probs=24.5

Q ss_pred             CCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++  |.+||... ..|++|+||.|||..++
T Consensus        28 ~~Gd~i~v~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (69)
T 1uhf_A           28 TEGEEILVTQKDGEWWTGS-IGDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             CTTCEEEECEEETTEEEEC-STTCCEEECGGGCEECC
T ss_pred             CCCCEEEEEEeCCCEEEEE-eCCcEEEEchHHeEECC
Confidence            446655533  46787643 56899999999999865

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=94.02  E-value=0.029  Score=35.52  Aligned_cols=33  Identities=3%  Similarity=0.013  Sum_probs=23.5

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .|.+||... ..|+.|++|.|||..+
T Consensus        24 ~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yv~~l   59 (60)
T 1w70_A           24 KAGDVIFLLSRINKDWLEGT-VRGATGIFPLSFVKIL   59 (60)
T ss_dssp             CTTCEEEEEEECSSSEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEeCCCCeEEEE-ECCCEEEechHHEEEC
Confidence            44666554   356787644 4689999999999863

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.01  E-value=0.029  Score=36.50  Aligned_cols=35  Identities=11%  Similarity=0.032  Sum_probs=25.8

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||.. ...|+.|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g-~~~g~~G~~P~~yv~~~~   63 (68)
T 2dmo_A           26 VMPGNIVFVLKKGNDNWATV-MFNGQKGLVPCNYLEPVS   63 (68)
T ss_dssp             CCTTCEEEECEECSSSCEEE-EETTEEEEECSTTEEECC
T ss_pred             CCCCCEEEEEEeCCCCEEEE-EeCCCEEEeehHHeEECC
Confidence            355666664   34678854 567899999999999865

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=93.95  E-value=0.032  Score=40.76  Aligned_cols=35  Identities=14%  Similarity=0.075  Sum_probs=26.1

Q ss_pred             CCCCccee---cCCccccccc--cCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGL--SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~--~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .|.+||....  ..|+.|+||.|||...+
T Consensus        23 ~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~   62 (120)
T 2kym_A           23 SPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIID   62 (120)
T ss_dssp             CTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEEC
T ss_pred             CCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEcc
Confidence            45666664   4578886543  67899999999999865

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=93.93  E-value=0.011  Score=40.53  Aligned_cols=34  Identities=3%  Similarity=-0.140  Sum_probs=24.3

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...++  +.+||......|++|+||.|||.+
T Consensus        50 ~~~Gd~i~v~~~~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           50 IKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CCTTEEEEEEECCSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             cCCCCEEEEEecCCCeEEEEECCCCEEEeehHHEEe
Confidence            4556666643  457887554579999999999964

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=93.90  E-value=0.024  Score=36.21  Aligned_cols=34  Identities=15%  Similarity=0.118  Sum_probs=24.4

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ..|+.|+||.|||.+++
T Consensus        27 ~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A           27 KVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKELE   63 (65)
T ss_dssp             CTTCEEEEEEEEETTEEEEE-ETTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCCEEEeehHHEEECc
Confidence            446665543   45787644 57899999999998854

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.88  E-value=0.09  Score=36.05  Aligned_cols=36  Identities=8%  Similarity=0.047  Sum_probs=26.6

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |.+||.... .+|++|+||.|||..+.
T Consensus        36 f~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   75 (90)
T 2yup_A           36 FRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSR   75 (90)
T ss_dssp             CCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEE
T ss_pred             CCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcC
Confidence            4567777654   456876443 45999999999999876

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.86  E-value=0.069  Score=36.53  Aligned_cols=35  Identities=6%  Similarity=-0.037  Sum_probs=25.8

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+...++   |.+||.. ...|+.|++|.|||..+.
T Consensus        37 f~~Gd~i~v~~~~~~~Ww~g-~~~g~~G~fP~~yv~~~~   74 (88)
T 2dbk_A           37 LEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKIFD   74 (88)
T ss_dssp             BCTTCEEEEEEECTTSCEEE-ECSSCEEEECTTTEEECC
T ss_pred             CCCCCEEEEEEecCCCEEEE-EeCCCEEEEehHHeEECC
Confidence            4566666643   4578864 456899999999999876

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=93.81  E-value=0.025  Score=35.37  Aligned_cols=33  Identities=12%  Similarity=0.080  Sum_probs=22.8

Q ss_pred             CCCCccee---cCCccccc-cccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASR-GLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~-~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .+.+||.. ...+|++|+||.|||.+
T Consensus        21 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A           21 KKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             CTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             CCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            44666553   34568754 34459999999999975

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=93.75  E-value=0.029  Score=36.50  Aligned_cols=35  Identities=14%  Similarity=0.229  Sum_probs=25.6

Q ss_pred             CCCCcceec---CCcccccc-ccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ...|+.|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2cuc_A           27 QKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVS   65 (70)
T ss_dssp             CTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECC
T ss_pred             CCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECc
Confidence            456666643   45787544 477999999999999865

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.73  E-value=0.033  Score=38.58  Aligned_cols=36  Identities=11%  Similarity=-0.069  Sum_probs=26.2

Q ss_pred             CCCCCcceec-----C--Cccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----D--PGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----d--p~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++     +  .+||.... ..|+.|+||.|||..+.
T Consensus        35 ~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   78 (94)
T 2e5k_A           35 LVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKAD   78 (94)
T ss_dssp             BCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcc
Confidence            4567776653     2  67876443 78999999999999864

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=93.68  E-value=0.082  Score=36.85  Aligned_cols=36  Identities=14%  Similarity=0.019  Sum_probs=26.4

Q ss_pred             CCCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..+.|+...++   |.+||... ..|++|+||.|||..+.
T Consensus        52 s~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   90 (98)
T 1udl_A           52 SFSKGQLINVMNKDDPDWWQGE-INGVTGLFPSNYVKMTT   90 (98)
T ss_dssp             CCCTTCEEEECBCCSSSEEBCB-SSSCBCCEETTSEEECC
T ss_pred             CCcCCCEEEEEEecCCCEEEEE-ECCcEEEEehHHeEEcC
Confidence            34567776654   45787644 57899999999999865

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.68  E-value=0.13  Score=34.91  Aligned_cols=35  Identities=9%  Similarity=0.081  Sum_probs=25.4

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+...++     +.+||... ..|+.|+||.|||..+.
T Consensus        27 f~~Gd~i~v~~~~~~~~~Ww~g~-~~g~~G~fP~~yv~~~~   66 (85)
T 2dlp_A           27 FHRGDLIKLLPVATLEPGWQFGS-AGGRSGLFPADIVQPAA   66 (85)
T ss_dssp             BCTTCEEEECCCSCCCTTEEEEE-SSSCEEEEETTSEEECC
T ss_pred             CcCCCEEEEEEccCCCCCeEEEE-ECCEEEEechHHeEECC
Confidence            3557776654     45687643 36899999999999865

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=93.67  E-value=0.04  Score=36.51  Aligned_cols=34  Identities=12%  Similarity=-0.011  Sum_probs=24.8

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||.. ...|+.|++|.|||..++
T Consensus        31 ~~Gd~i~v~~~~~~gWw~g-~~~g~~G~fP~~yv~~~~   67 (73)
T 2ebp_A           31 KKGDIIDIISKPPMGTWMG-LLNNKVGTFKFIYVDVLS   67 (73)
T ss_dssp             CSSCEEEEEECCSSSCEEE-ECSSCEEEECSTTEEECC
T ss_pred             CCCCEEEEEEeCCCCeEEE-EECCCEEEEeHHHEEECC
Confidence            456666543   4568764 447899999999999865

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=93.65  E-value=0.07  Score=36.14  Aligned_cols=34  Identities=3%  Similarity=0.013  Sum_probs=24.5

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||... ..|+.|++|.|||..++
T Consensus        38 ~~Gd~I~Vl~~~~~gWw~g~-~~g~~G~fP~nyV~~~~   74 (79)
T 1z9q_A           38 KAGDVIFLLSRINKDWLEGT-VRGATGIFPLSFVKILK   74 (79)
T ss_dssp             CTTCCBCCCEESSSSEEEEE-ETTEEEEEEGGGEEESS
T ss_pred             cCCCEEEEeEecCCCEEEEE-ECCeEEEecHHHEEECC
Confidence            44555543   467788644 46899999999999865

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=93.63  E-value=0.038  Score=37.51  Aligned_cols=36  Identities=8%  Similarity=0.040  Sum_probs=25.7

Q ss_pred             CCCCCcceecC--Cccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD--PGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d--p~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.+  .+||.... ..|++|+||.|||..++
T Consensus        44 ~~~Gd~i~v~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   82 (86)
T 2oi3_A           44 FQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD   82 (86)
T ss_dssp             CCTTCEEEEEEESSSEEEEEETTTCCEEEEEGGGEEEGG
T ss_pred             CCCCCEEEEEEcCCCeEEEEECCCCCEEEEehHHcEEcc
Confidence            45666666432  47876443 68999999999999865

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=93.63  E-value=0.057  Score=34.93  Aligned_cols=34  Identities=9%  Similarity=0.095  Sum_probs=24.3

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||... ..|+.|+||.|||..+.
T Consensus        27 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   63 (68)
T 1wi7_A           27 KVGDIIEVVGEVEEGWWEGV-LNGKTGMFPSNFIKELS   63 (68)
T ss_dssp             CTTCEECCCEEEETTEEEEC-STTCCEEEETTSEEECC
T ss_pred             cCCCEEEEEEcCCCCeEEEE-ECCcEEEEchHHEEECC
Confidence            44555443   356787644 57999999999999865

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.63  E-value=0.039  Score=36.92  Aligned_cols=35  Identities=9%  Similarity=-0.165  Sum_probs=25.7

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||... ..|+.|+||.|||..++
T Consensus        36 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   73 (79)
T 1x69_A           36 FDPDDIITNIEMIDDGWWRGV-CKGRYGLFPANYVELRQ   73 (79)
T ss_dssp             CCTTCEEEEEEECSSSEEEEE-ETTEEEEEETTSEEECC
T ss_pred             cCCCCEEEEeEecCCCeEEEE-ECCcEEEechHHEEECC
Confidence            456676664   356787644 57899999999999865

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=93.61  E-value=0.033  Score=36.30  Aligned_cols=36  Identities=11%  Similarity=0.146  Sum_probs=25.2

Q ss_pred             CCCCCcceec---CCccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   |.+||.... ..|+.|+||.|||..+.
T Consensus        26 ~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ecz_A           26 FRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIS   65 (70)
T ss_dssp             CCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESS
T ss_pred             CCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECC
Confidence            4557766643   457875443 35799999999999865

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=93.59  E-value=0.081  Score=34.87  Aligned_cols=35  Identities=0%  Similarity=-0.141  Sum_probs=25.3

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.  +.+||.... .|++|+||.|||..+.
T Consensus        29 ~~~Gd~i~v~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   65 (74)
T 1j3t_A           29 FSKHDIITVLEQQENWWFGEV-HGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             BCTTCEEEEEEECSSEEEEES-TTCCCEEEGGGEEECC
T ss_pred             CCCCCEEEEEecCCCEEEEEE-CCcEEEEchHHeEECC
Confidence            3556666643  467876443 6899999999999865

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.53  E-value=0.049  Score=35.51  Aligned_cols=35  Identities=6%  Similarity=-0.103  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||..... |++|+||.|||..++
T Consensus        27 ~~~Gd~i~v~~~~~~~Ww~g~~~-g~~G~~P~~yv~~~~   64 (71)
T 2dnu_A           27 FEKGVTVEVIRKNLEGWWYIRYL-GKEGWAPASYLKKAK   64 (71)
T ss_dssp             BCTTCEEEECCCCSSSEEEEEET-TEEEEEEGGGCEECC
T ss_pred             CCCCCEEEEeECCCCCeEEEEEC-CcEEEEEHHHeEEcc
Confidence            3557776654   3568764444 999999999999866

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=93.52  E-value=0.032  Score=35.56  Aligned_cols=32  Identities=9%  Similarity=0.061  Sum_probs=22.7

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.   |++||... ..|+.|+||.|||..
T Consensus        25 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~   59 (62)
T 1uj0_A           25 KHGELITVLDDSDANWWQGE-NHRGTGLFPSNFVTT   59 (62)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEES
T ss_pred             CCCCEEEEEEeCCCCEEEEE-ECCCEEEechhHEEE
Confidence            456666643   45787643 347899999999975

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=93.48  E-value=0.035  Score=35.99  Aligned_cols=34  Identities=15%  Similarity=0.118  Sum_probs=24.1

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||... ..|+.|++|.|||....
T Consensus        21 ~~Gd~i~v~~~~~~gWw~g~-~~g~~G~fP~~yv~~~~   57 (65)
T 2fei_A           21 KVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKELE   57 (65)
T ss_dssp             CTTCEEECCCCSSSSEEEEE-SSSCEEEEETTTSCBCC
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCcEEEecHHHEEEcC
Confidence            446655543   45787643 47999999999998754

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=93.28  E-value=0.03  Score=40.33  Aligned_cols=36  Identities=8%  Similarity=0.003  Sum_probs=24.8

Q ss_pred             CCCCCcceecC----Cc--ccccccc-------CCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD----PG--VASRGLS-------LAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d----p~--~~~~~~~-------~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.+    .+  ||.....       .|+.|++|+|||.+..
T Consensus        41 f~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~   89 (108)
T 1i1j_A           41 IHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   89 (108)
T ss_dssp             BCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             cCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcc
Confidence            45677766543    34  8864433       2899999999998865

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=93.22  E-value=0.032  Score=35.31  Aligned_cols=31  Identities=3%  Similarity=-0.038  Sum_probs=22.2

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceE
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCAL   65 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~   65 (196)
                      +.|+...+.   +.+||.... .|+.|+||.|||.
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~   59 (60)
T 2gnc_A           26 KKGASLLLYHRASEDWWEGRH-NGIDGLVPHQYIV   59 (60)
T ss_dssp             CTTCEEEEEEEEETTEEEEEE-TTEEEEEEGGGEE
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCeEEEEeHhhEE
Confidence            456666543   457876444 6999999999995

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=93.21  E-value=0.017  Score=35.76  Aligned_cols=31  Identities=10%  Similarity=0.045  Sum_probs=21.4

Q ss_pred             CCCCcceec---C-CccccccccCCCcceeeccceE
Q psy13388         34 RLGPGYSIA---D-PGVASRGLSLAEQDFLTMNCAL   65 (196)
Q Consensus        34 ~~~~~~~~~---d-p~~~~~~~~~g~~G~vP~nyv~   65 (196)
                      +.|+...+.   + ++|+.... .|+.|+||.|||.
T Consensus        20 ~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yv~   54 (54)
T 2a28_A           20 DPGDIITVIRGDDGSGWTYGEC-DGLKGLFPTSYCK   54 (54)
T ss_dssp             CTTCEEEEEECCCSSSEEEEEE-TTEEEEEEGGGBC
T ss_pred             CCCCEEEEEEecCCCCEEEEEE-CCeEEEeeHHHcC
Confidence            446665532   2 46776444 8999999999984

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=93.05  E-value=0.05  Score=37.09  Aligned_cols=36  Identities=11%  Similarity=0.115  Sum_probs=25.5

Q ss_pred             CCCCCcceecC---Ccccccccc-----CCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD---PGVASRGLS-----LAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d---p~~~~~~~~-----~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.+   .+||.....     +|+.|++|.|||..++
T Consensus        38 f~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           38 VRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             BCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             ccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            45677776544   468864443     4799999999998754

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=93.00  E-value=0.041  Score=36.74  Aligned_cols=34  Identities=9%  Similarity=0.038  Sum_probs=25.1

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...++   |.+||... ..|++|+||.|||..+.
T Consensus        11 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   47 (77)
T 2jmc_A           11 KKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKKLD   47 (77)
T ss_dssp             CTTCEEECCCCCCSSCCCEE-ETTEEECCCGGGEEECC
T ss_pred             CCCCEEEEEEecCCCEEEEE-ECCcEEEEEeeEEEEcC
Confidence            456666644   45677643 67999999999999865

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=92.94  E-value=0.03  Score=36.32  Aligned_cols=35  Identities=6%  Similarity=-0.013  Sum_probs=24.8

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||.. ...|+.|++|.|||..++
T Consensus        27 ~~~Gd~i~v~~~~~~gWw~g-~~~g~~G~fP~~yv~~~~   64 (67)
T 2eyx_A           27 LEVGELVKVTKINVSGQWEG-ECNGKRGHFPFTHVRLLD   64 (67)
T ss_dssp             BCSSEEEEEEEECTTSEEEE-EETTEEEEEEGGGBCCBC
T ss_pred             cCCCCEEEEEEecCCCEEEE-EECCCEEEEehHhEEEcC
Confidence            345666554   35678764 456899999999998754

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=92.91  E-value=0.13  Score=43.52  Aligned_cols=46  Identities=24%  Similarity=0.424  Sum_probs=39.2

Q ss_pred             ccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeC-CcceE
Q psy13388        107 KTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCS-GAPKH  152 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~-~~vkH  152 (196)
                      +|=|. .|+-+||.+.|+  ..+.|+|++|-|  ..|.|+|+.... +.|.|
T Consensus       228 hpGy~aFlTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s~g~I~q  279 (323)
T 3op0_A          228 HPGYMAFLTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSSDGSILQ  279 (323)
T ss_dssp             CTTBCTTCCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECTTSCEEE
T ss_pred             CcceeeeeeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcCCCceee
Confidence            57788 999999999998  579999999999  999999999774 44433

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=92.90  E-value=0.043  Score=38.23  Aligned_cols=35  Identities=9%  Similarity=0.051  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||... ..|+.|+||.|||..+.
T Consensus        37 f~~Gd~i~V~~~~~~gWw~g~-~~g~~G~fPsnyV~~~~   74 (92)
T 2o2o_A           37 LKVGDIIEVVGEVEEGWWEGV-LNGKTGMFPSNFIKELS   74 (92)
T ss_dssp             BCSSCEEECCCGGGSSCBCCE-ETTEECCBCSSSEECCS
T ss_pred             ccCCCEEEEeEecCCCEEEEE-ECCeEEEeehHHEEECC
Confidence            3556666644   45787644 47999999999999865

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.87  E-value=0.094  Score=34.05  Aligned_cols=35  Identities=14%  Similarity=0.079  Sum_probs=25.1

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .+.+||... ..|++|+||.|||...+
T Consensus        27 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   64 (70)
T 2ega_A           27 LQAGEVVDVIEKNESGWWFVS-TSEEQGWVPATYLEAQN   64 (70)
T ss_dssp             CCTTCBCEEEEECTTSEEEEE-CSSCEEEEEGGGCEESC
T ss_pred             CCCCCEEEEEEccCCCeEEEE-ECCCEEEEehHHcEECC
Confidence            345666654   356787644 45899999999999865

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=92.79  E-value=0.038  Score=36.76  Aligned_cols=33  Identities=15%  Similarity=0.094  Sum_probs=23.5

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...+.   |++||... ..|+.|+||.|||.+
T Consensus        36 f~~Gd~i~Vl~~~~~gWw~g~-~~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           36 FKAGEIITVLDDSDPNWWKGE-THQGIGLFPSNFVTA   71 (72)
T ss_dssp             BCTTCEEEEEEEEETTEEEEE-CSSCEEECTTCCEEE
T ss_pred             CCCCCEEEEEEecCCCEEEEE-ECCCEEEechhhCcc
Confidence            3557766653   46788643 457899999999975

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=92.72  E-value=0.033  Score=35.53  Aligned_cols=34  Identities=9%  Similarity=0.086  Sum_probs=22.9

Q ss_pred             CCCCcceec---CCcccccccc-C------CCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLS-L------AEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~-~------g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.   +++||..... +      |+.|+||.|||..+
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A           21 KKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             CTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            456666643   4578753322 1      88999999999874

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.65  E-value=0.02  Score=38.49  Aligned_cols=36  Identities=8%  Similarity=-0.023  Sum_probs=25.4

Q ss_pred             CCCCCcceec--CCccccccc-cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGL-SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~-~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++  +.+||.... ..|+.|+||.|||..+.
T Consensus        36 ~~~Gd~i~v~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~   74 (79)
T 1x6b_A           36 LQQADVVLVLQQEDGWLYGERLRDGETGWFPEDFARFIS   74 (79)
T ss_dssp             CCTTEEEEEEEEETTEEEEEETTTCCEEEECGGGCEEEE
T ss_pred             CCCCCEEEEEEeCCCEEEEEECCCCCEEEEchHHEEECC
Confidence            4456665533  567876443 37999999999998865

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=92.61  E-value=0.053  Score=41.70  Aligned_cols=35  Identities=11%  Similarity=0.016  Sum_probs=25.7

Q ss_pred             CCCCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         32 GGRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        32 ~~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      ..+.|+...+.   |++||......|++|+||.|||+.
T Consensus       136 sf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          136 PFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             CBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             ccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence            34567766643   467887555689999999999974

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=92.58  E-value=0.08  Score=34.55  Aligned_cols=34  Identities=6%  Similarity=-0.045  Sum_probs=22.7

Q ss_pred             CCCCcceec---CCccccccccCCCcc-eeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQD-FLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G-~vP~nyv~~~~   68 (196)
                      +.|+...+.   +.+||.... .|+.| +||.|||..+.
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~~-~g~~gG~~P~~yv~~~~   63 (71)
T 1hsq_A           26 IKSAIIQNVEKQEGGWWRGDY-GGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             CTTCCCBSCCCBTTTEECCBC-SSSCSCCEETTTCCSCS
T ss_pred             CCCCEEEEEEecCCCEEEEEE-CCeEEeEEChHHcEECC
Confidence            446555543   457886544 45555 99999998765

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=92.45  E-value=0.057  Score=34.13  Aligned_cols=34  Identities=9%  Similarity=-0.013  Sum_probs=22.7

Q ss_pred             CCCCccee---cCCccccccccCCCcc-eeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQD-FLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G-~vP~nyv~~~~   68 (196)
                      +.|+...+   .+.+||.... .|++| +||.|||..+.
T Consensus        23 ~~Gd~i~v~~~~~~~W~~g~~-~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A           23 TKSAIIQNVEKQDGGWWRGDY-GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CTTCEEEEEECCSSSEEEEEE-TTEEEEEEEGGGEEECC
T ss_pred             cCCCEEEEEEecCCCEEEEEE-CCeEEEEEChHHcEECC
Confidence            45666654   3557876544 45565 99999998753

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=92.16  E-value=0.044  Score=37.84  Aligned_cols=24  Identities=4%  Similarity=-0.184  Sum_probs=19.0

Q ss_pred             cccccc-ccCCCcceeeccceEecc
Q psy13388         45 GVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        45 ~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      +||... ...|+.|++|.|||..+.
T Consensus        60 gW~~G~~~~~g~~G~fP~nyVe~i~   84 (90)
T 3o5z_A           60 GWMPGLNERTRQRGDFPGTYVEFLG   84 (90)
T ss_dssp             CEEEEEETTTCCEEEEEGGGEEEEE
T ss_pred             CceEEEeCCCCCEEEeehHHEEEec
Confidence            687643 456999999999998865

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=91.93  E-value=0.076  Score=48.35  Aligned_cols=36  Identities=8%  Similarity=-0.094  Sum_probs=26.1

Q ss_pred             CCCCCccee---cCCcccccc-ccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRG-LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~-~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||... ..+|+.|++|+|||++..
T Consensus       461 ~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~  500 (526)
T 2de0_X          461 MEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKI  500 (526)
T ss_dssp             BCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEcc
Confidence            456766653   467888643 367999999999998854

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=91.87  E-value=0.072  Score=35.26  Aligned_cols=35  Identities=9%  Similarity=-0.006  Sum_probs=25.3

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.   +.+||... ..|++|+||.|||..+.
T Consensus        29 ~~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~   66 (76)
T 1ujy_A           29 VCKGDIIYVTRVEEGGWWEGT-LNGRTGWFPSNYVREIK   66 (76)
T ss_dssp             BCSSCCEEESSCCSSSCEEEE-ETTEEEEECTTTSEECC
T ss_pred             CCCCCEEEEEEecCCCEEEEE-ECCCEEEechHHEEECC
Confidence            3456766654   45687644 47899999999999865

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=91.69  E-value=0.61  Score=39.01  Aligned_cols=37  Identities=8%  Similarity=-0.070  Sum_probs=28.0

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEeccC
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      .+.|+...+.   |.+||......|++|+||.|||.....
T Consensus       153 f~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~  192 (304)
T 2eyz_A          153 FKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRP  192 (304)
T ss_dssp             CCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECCC
T ss_pred             ccCCCEEEEEEecCCCcEEEEeCCCceeccchhccccccC
Confidence            4567776653   467887655679999999999998764

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=91.32  E-value=0.11  Score=39.11  Aligned_cols=35  Identities=11%  Similarity=-0.039  Sum_probs=25.7

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++    +.+||... ..|+.|+||.|||....
T Consensus        24 f~~Gd~i~Vl~~~~~~gWw~g~-~~g~~G~fP~~yv~~~~   62 (142)
T 2kbt_A           24 LKEGDIIKILNKKGQQGWWRGE-IYGRIGWFPSNYVEEDY   62 (142)
T ss_dssp             CCTTCEEEEEECCCSSSEEEEE-ETTEEEEEETTSEEESS
T ss_pred             CCCCCEEEEEEecCCCCeEEEE-ECCeeEEechHHEEEcc
Confidence            3557776642    45787644 47899999999999865

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=91.27  E-value=0.092  Score=34.38  Aligned_cols=35  Identities=9%  Similarity=0.015  Sum_probs=23.5

Q ss_pred             CCCCcceec--CCccccccc-c-CCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA--DPGVASRGL-S-LAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~--dp~~~~~~~-~-~g~~G~vP~nyv~~~~   68 (196)
                      +.|+...+.  +.+||.... . .|++|+||.|||...+
T Consensus        31 ~~Gd~i~v~~~~~~W~~g~~~~~~g~~G~~P~~yv~~~~   69 (74)
T 2m0y_A           31 QIGDTVHILETYEGWYRGYTLRKKSKKGIFPASYIHLKE   69 (74)
T ss_dssp             ETTEEEEEEEBSSSCEEEEESSCSSCCEEECGGGEEECC
T ss_pred             CCCCEEEEEEcCCCeEEEEECCCCCCEEEEehHHEEEec
Confidence            345555533  357875433 3 5899999999998754

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=91.09  E-value=0.032  Score=43.89  Aligned_cols=37  Identities=5%  Similarity=-0.167  Sum_probs=27.0

Q ss_pred             CCCCCCcceec---CCccccccccCCCcceeeccceEeccC
Q psy13388         32 GGRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        32 ~~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      ..+.|+...++   +.+||... ..|+.|+||.|||.....
T Consensus        99 s~~~Gd~i~vl~~~~~gWw~g~-~~g~~G~~P~~yv~~~~~  138 (193)
T 1ng2_A           99 SLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQKSGQ  138 (193)
T ss_dssp             CBCTTCEEEEEECCTTSEEEEE-ETTEEEEEEGGGEEETTS
T ss_pred             cccCCCEEEEEEecCCCeEEEE-ECCCEEEEehHHeEECCC
Confidence            34567776644   45788644 478999999999998764

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=91.02  E-value=0.11  Score=37.41  Aligned_cols=36  Identities=8%  Similarity=0.023  Sum_probs=23.7

Q ss_pred             CCCCCccee---cCCccccccc--cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGL--SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~--~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+...+   .|++||....  ..|+.|+||.|||...+
T Consensus        24 f~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~~   64 (108)
T 2rqv_A           24 TYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIID   64 (108)
T ss_dssp             CCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBCCC
T ss_pred             cCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEEec
Confidence            344555543   4678886443  23556999999998765

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=89.11  E-value=0.17  Score=41.31  Aligned_cols=35  Identities=14%  Similarity=0.033  Sum_probs=25.7

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|++||.. ...|++|+||.|||....
T Consensus        21 ~~~gd~i~v~~~~~~~w~~~-~~~g~~G~~P~~~v~~~~   58 (283)
T 3jv3_A           21 FSKGQIINVLNKEDPDWWKG-EVSGQVGLFPSNYVKLTT   58 (283)
T ss_dssp             BCTTCEEEEEECCSTTEEEE-EETTEEEEEEGGGEEEGG
T ss_pred             CCCCCEEEEEecCCCCEEEE-EECCCCCcCCCccccccC
Confidence            345666664   35678864 467899999999999865

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=89.07  E-value=0.23  Score=39.16  Aligned_cols=35  Identities=17%  Similarity=0.141  Sum_probs=25.8

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|++||.... .|+.|++|.|||..++
T Consensus       177 ~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~  214 (217)
T 1gri_A          177 FRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTPVN  214 (217)
T ss_dssp             CCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEEEC
T ss_pred             CCCCCEEEEEEeCCCCeEEEEE-CCeEEEEeHHHeEECC
Confidence            456666664   3567886444 7999999999999865

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=88.88  E-value=0.11  Score=37.58  Aligned_cols=35  Identities=14%  Similarity=-0.061  Sum_probs=23.9

Q ss_pred             CCCCCcceecC--------Ccccccc-cc--------CCCcceeeccceEec
Q psy13388         33 GRLGPGYSIAD--------PGVASRG-LS--------LAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~d--------p~~~~~~-~~--------~g~~G~vP~nyv~~~   67 (196)
                      .+.|+...++.        .+||... ..        .|+.|+||.|||..+
T Consensus        63 f~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           63 LKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             BCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             cCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            45677776544        4687532 22        278999999999864

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=88.86  E-value=0.18  Score=40.67  Aligned_cols=36  Identities=11%  Similarity=-0.080  Sum_probs=25.1

Q ss_pred             CCCCCCcceecC--------Ccccccccc---------CCCcceeeccceEec
Q psy13388         32 GGRLGPGYSIAD--------PGVASRGLS---------LAEQDFLTMNCALAV   67 (196)
Q Consensus        32 ~~~~~~~~~~~d--------p~~~~~~~~---------~g~~G~vP~nyv~~~   67 (196)
                      .++.|+.+.++.        .+||.....         .|+.|+||.|||..+
T Consensus       160 Sf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          160 QLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             CBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             CcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            346677777655        468764321         489999999999864

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=87.40  E-value=0.11  Score=46.50  Aligned_cols=35  Identities=14%  Similarity=0.145  Sum_probs=0.0

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      ++.|+.+.++    +++||......|+.|+||.|||..+
T Consensus       447 f~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          447 FKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             ---------------------------------------
T ss_pred             cCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            3456665533    3578876666699999999999763

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=87.12  E-value=0.12  Score=43.50  Aligned_cols=38  Identities=8%  Similarity=-0.083  Sum_probs=27.4

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEeccCC
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVTGG   70 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~~~   70 (196)
                      .+.|+...+.   |.+||......|++|+||.|||...+..
T Consensus       144 f~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~~  184 (303)
T 2lqn_A          144 FKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRS  184 (303)
Confidence            3456665543   4578876555799999999999987643

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=87.17  E-value=0.18  Score=36.67  Aligned_cols=35  Identities=11%  Similarity=-0.053  Sum_probs=24.2

Q ss_pred             CCCCCcceecC--Cccccccc-c-CCCcceeeccceEec
Q psy13388         33 GRLGPGYSIAD--PGVASRGL-S-LAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~d--p~~~~~~~-~-~g~~G~vP~nyv~~~   67 (196)
                      .+.|+...+++  .+||.... . .|+.|+||.|||...
T Consensus        78 f~~Gd~i~vl~~~~gWw~g~~~~~~g~~G~fP~nyV~~~  116 (119)
T 2rqr_A           78 LQIGDVVRIQETCGDWYRGYLIKHKMLQGIFPKSFIHIK  116 (119)
T ss_dssp             BCTTCEEEEEEEETTEEEEEESSCTTCEEEEEGGGBCCC
T ss_pred             CcCCCEEEEEEcCCCEEEEEECCCCCCEEEeChhHEEEe
Confidence            35566666433  47876433 3 689999999999764

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=86.78  E-value=0.12  Score=43.44  Aligned_cols=36  Identities=11%  Similarity=0.047  Sum_probs=25.1

Q ss_pred             CCCCCCcceec---CCccccccc-cC----CCcceeeccceEec
Q psy13388         32 GGRLGPGYSIA---DPGVASRGL-SL----AEQDFLTMNCALAV   67 (196)
Q Consensus        32 ~~~~~~~~~~~---dp~~~~~~~-~~----g~~G~vP~nyv~~~   67 (196)
                      .+++|+.+.+.   |++||.... ..    |+.|+||+||+++.
T Consensus        24 sf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~   67 (295)
T 1kjw_A           24 SFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (295)
T ss_dssp             CBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             cCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence            45678887754   578886433 22    47899999998764

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=86.36  E-value=0.52  Score=32.99  Aligned_cols=22  Identities=5%  Similarity=-0.117  Sum_probs=17.6

Q ss_pred             cccccccCCCcceeeccceEeccC
Q psy13388         46 VASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        46 ~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      ||.+.  .|..||||+||+.....
T Consensus        57 W~Vdt--gg~~GyvPs~yLe~~~~   78 (92)
T 1ug1_A           57 WLIDN--GVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             EEEEC--SSSEEEEEGGGEEECCC
T ss_pred             eEEEC--CCcEEeeEhhhceEccc
Confidence            66443  78999999999998763

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=85.52  E-value=0.16  Score=50.58  Aligned_cols=78  Identities=13%  Similarity=0.154  Sum_probs=0.0

Q ss_pred             ccccccCCHHHHHHHHhC----CCC-ceEEEeeC--CCCCeEEEeee--CCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        107 KTWLVRMSRAQAEALLSG----RPD-GTFLIRPS--TTGQYALSIVC--SGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       107 ~~Wy~~isR~eAe~lL~~----~~~-G~FLVR~S--~~g~y~LSvr~--~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      +..|..-++.+++++|..    ++. =.|.+.-+  .||.|.|+.+.  ...++|.-|....+|++|..  ..|++|.+|
T Consensus      1121 h~kf~~g~~~eve~~L~~~k~~nP~ri~Y~f~~~~~~PG~F~L~f~~~~~~~~~~~~v~v~p~Gf~~r~--~~f~~~~~L 1198 (1219)
T 3psi_A         1121 SEKFKSGTKKDVVKFIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINANSKLYTWNVKLTNTGYFLVN--YNYPSVIQL 1198 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhhcCCCHHHHHHHHHHHHHhCCCcceEEEEeCCCCCCEEEEEEecCCCCCceeeeEEEccCeEEEcC--ccCcCHHHH
Confidence            444446679999999963    111 12333333  89999999986  45688877777777876654  689999999


Q ss_pred             HHHHhhCCc
Q psy13388        178 VLHYAANSL  186 (196)
Q Consensus       178 I~hY~~~~l  186 (196)
                      +.+|+.+--
T Consensus      1199 ~~~FK~~~~ 1207 (1219)
T 3psi_A         1199 CNGFKTLLK 1207 (1219)
T ss_dssp             ---------
T ss_pred             HHHHHHHhc
Confidence            999987643

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=85.42  E-value=0.32  Score=40.56  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=25.4

Q ss_pred             cCCCCCCcceec---CCccccccccCCCcceeeccceEe
Q psy13388         31 AGGRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        31 ~~~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      ....+|+.+.+.   ++.||......|.+|+||+||+..
T Consensus       212 ~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~i  250 (283)
T 3pe0_A          212 VTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLV  250 (283)
T ss_dssp             CEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEEC
T ss_pred             ccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEee
Confidence            344567777754   467988888899999999999986

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=82.64  E-value=0.73  Score=35.90  Aligned_cols=35  Identities=9%  Similarity=0.023  Sum_probs=25.7

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||... ..|++|+||.|||...+
T Consensus        30 ~~~Gd~i~vl~~~~~gWw~g~-~~g~~G~~P~~yv~~~~   67 (193)
T 1ng2_A           30 LSTGDVVEVVEKSESGWWFCQ-MKAKRGWIPASFLEPLD   67 (193)
T ss_dssp             BCTTCEEEEEECCTTSCCEEE-ECCCCCCCCGGGCCCSS
T ss_pred             CCCCCEEEEEEecCCCeEEEE-ECCeeeEechheEEeec
Confidence            3556666643   45688644 67899999999998866

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=82.33  E-value=0.47  Score=40.83  Aligned_cols=34  Identities=12%  Similarity=-0.050  Sum_probs=24.6

Q ss_pred             CCCCCCcceec---CCccccccc--cCCCcceeeccceE
Q psy13388         32 GGRLGPGYSIA---DPGVASRGL--SLAEQDFLTMNCAL   65 (196)
Q Consensus        32 ~~~~~~~~~~~---dp~~~~~~~--~~g~~G~vP~nyv~   65 (196)
                      .+++|+.+.|.   |++||..+.  ..|..||||++...
T Consensus        63 sF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~~~  101 (337)
T 4dey_A           63 SFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKL  101 (337)
T ss_dssp             CBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHH
T ss_pred             cccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHHHH
Confidence            45778887754   678886543  34788999999843

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=81.77  E-value=0.61  Score=39.01  Aligned_cols=33  Identities=12%  Similarity=0.041  Sum_probs=24.6

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceE
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCAL   65 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~   65 (196)
                      .+.|+...++   |.+||......|++|+||.|||.
T Consensus       166 f~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~  201 (308)
T 3qwy_A          166 FEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ  201 (308)
T ss_dssp             BCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEE
T ss_pred             CCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccc
Confidence            4556666643   46788755568899999999999

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=81.23  E-value=0.47  Score=36.95  Aligned_cols=36  Identities=11%  Similarity=-0.056  Sum_probs=24.4

Q ss_pred             CCCCCcceecC--Cccccccc--cCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD--PGVASRGL--SLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d--p~~~~~~~--~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+.+  .+||....  ..|+.|++|.|||....
T Consensus        36 ~~~Gd~i~v~~~~~~W~~g~~~~~~g~~G~fP~nyV~~~~   75 (184)
T 3a98_A           36 LQIGDVVRIQETCGDWYRGYLIKHKMLQGIFPKSFIHIKE   75 (184)
T ss_dssp             BCTTCEEEEEEEETTEEEEEETTEEEEEEEEEGGGEEEEC
T ss_pred             cCCCCEEEEEecCCCEEEEEEecCCCceEEECcceEEEec
Confidence            45566666432  25875433  35789999999998865

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=80.84  E-value=0.68  Score=39.37  Aligned_cols=35  Identities=3%  Similarity=-0.036  Sum_probs=25.9

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||... ..|+.|++|.|||....
T Consensus       193 f~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~  230 (341)
T 2dyb_A          193 FKAGDVIFLLSRINKDWLEGT-VRGATGIFPLSFVKILK  230 (341)
T ss_dssp             BCTTCEEEEEEECSSSEEEEE-ETTEEEEEEGGGEEEEE
T ss_pred             ccCCCEEEEEEecCCCEEEEE-ECCcEEEechHHeEEcC
Confidence            455676664   356787643 57899999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	8e-29
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	2e-21
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	1e-18
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	1e-18
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	2e-18
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	1e-17
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	1e-17
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	1e-17
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	5e-17
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	1e-16
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	2e-16
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	2e-16
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	4e-16
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	5e-16
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	1e-15
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	1e-15
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	1e-15
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	2e-15
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	1e-14
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	1e-14
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-14
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-14
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	3e-14
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	7e-14
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	8e-14
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	1e-13
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	1e-13
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	2e-13
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	5e-13
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	5e-13
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	1e-12
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	4e-12
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	4e-11
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	9e-10

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  101 bits (252), Expect = 8e-29
 Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 2/96 (2%)

Query: 100 DLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 157
           DLPHHDEKTW V   +R +AE LL G+ DGTFL+R S+  G YA S+V  G  KHC++ +
Sbjct: 2   DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 61

Query: 158 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 193
           T  G+GFAEP+N+Y SL  LVLHY   SL +HND L
Sbjct: 62  TATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSL 97

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.3 bits (203), Expect = 2e-21
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR QAE LL G+  G F+IR S +  G +++S+      +H  V    +G  F     
Sbjct: 12  GLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT-E 70

Query: 170 IYPSLGALVLHYAANSLEEHND 191
            +PSL  LV +Y   S+ +   
Sbjct: 71  KFPSLNKLVDYYRTTSISKQKQ 92

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 1e-18
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 100 DLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVY 156
           DL   +        M +  AEALL G+P+GTFL+R S      +++S        H  + 
Sbjct: 4   DLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE 63

Query: 157 ETERGFGFAE---PFNIYPSLGALVLHYAANSLEEHNDDLI 194
           +    F F          P +  L+ HY   S     + L+
Sbjct: 64  QWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLL 104

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 1e-18
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 87  PMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSI 144
           P P      R   + P +  + +   +SR QA+ LL G  +G +++R S    G Y L++
Sbjct: 16  PRPKRIICPREVENRPKYYGREFHGIISREQADELLGG-VEGAYILRESQRQPGCYTLAL 74

Query: 145 VCSGAPKHCLVYETERGFGFAEPFNIYPSL--GALVLHYAANSLEEHNDDL 193
                  +  ++   + F   + F     L    L+  Y      E+   +
Sbjct: 75  RFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYIETKAAEYISKM 125

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.7 bits (183), Expect = 2e-18
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            +SR +    L    DGTFL+R ++T   G Y L++   G  K   ++  +  +GF++P 
Sbjct: 17  DISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPL 76

Query: 169 NIYPSLGALVLHYAANSLEEHNDDL 193
             + S+  L+ HY   SL ++N  L
Sbjct: 77  T-FNSVVELINHYRNESLAQYNPKL 100

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 1e-17
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 19/101 (18%)

Query: 108 TWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGF 164
           +W   R+SR +A ALL G+  G FL+R S+T  G Y LS+  +    H ++  +      
Sbjct: 1   SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPV 60

Query: 165 AEPFNI----------------YPSLGALVLHYAANSLEEH 189
                                 + SL AL+  Y  + L+  
Sbjct: 61  PPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTT 101

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 1e-17
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 96  RTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKH 152
           R  + L    +  W    M+  +A+  L   P+GTFLIR S+       +S+  S  P +
Sbjct: 4   RLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTN 63

Query: 153 CLVYETERGFGFAEPFNI------YPSLGALVLHYAANS 185
             +   +  F       +      + S+  L+ +Y    
Sbjct: 64  LRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMC 102

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 1e-17
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 112 RMSRAQAEALLS-GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           ++ RA+AE +LS  R DG FLIR S +  G ++LS+      +H  V     G  F    
Sbjct: 9   KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 68

Query: 169 NIYPSLGALVLHYAANSLEEHNDDLI 194
             + SL  LV ++ + S+  +    +
Sbjct: 69  K-FNSLNELVDYHRSTSVSRNQQIFL 93

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (174), Expect = 5e-17
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 9/92 (9%)

Query: 104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYET 158
           H  + W   R+SR ++  ++   G  DG FL+R S +    + L++      K+  +   
Sbjct: 2   HRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPC 61

Query: 159 ERG----FGFAEPFNIYPSLGALVLHYAANSL 186
           E      F   +    +  L  LV  Y  N  
Sbjct: 62  EDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKG 93

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.1 bits (171), Expect = 1e-16
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
            +SR  AE LLS   +G+FL+R S +  GQ ++S+   G   H  +     G  +    +
Sbjct: 11  PVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSES 70

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  LV H++  + 
Sbjct: 71  RFNTLAELVHHHSTVAD 87

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 2e-16
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALL--SGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETE 159
           H+   W    ++R +AE  L    + DG FL+RP    G YALS++      H L+ + +
Sbjct: 26  HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDK 85

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANS 185
            G         + +L  LV +    +
Sbjct: 86  AGKYCIPEGTKFDTLWQLVEYLKLKA 111

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 2e-16
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++S  +A   L    DG FL+R S    G Y L +       H  V   +      E   
Sbjct: 10  KISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEA-V 68

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  +V HY+ +  
Sbjct: 69  FFCNLMDMVEHYSKDKG 85

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (168), Expect = 4e-16
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           ++SR +AEALL  + +G FL+R STT  GQY L+ + SG PKH L+ + E      +  +
Sbjct: 13  KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKD--H 68

Query: 170 IYPSLGALVLHYAANSLEEHNDDL 193
            + S+  L+ ++  N L   +   
Sbjct: 69  RFESVSHLISYHMDNHLPIISAGS 92

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (167), Expect = 5e-16
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYET 158
           H  + W   R+SR +++ L+   G  DG FL+R S      + LS+      KH L+  +
Sbjct: 7   HRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPS 66

Query: 159 ERG----FGFAEPFNIYPSLGALVLHYAANSL 186
           E      F   +    +  L  LV  +  N  
Sbjct: 67  EEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRG 98

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 1e-15
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +++R QAE LL     G FL+R ST   G Y L + C G  +H  +          E   
Sbjct: 10  KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEE-V 68

Query: 170 IYPSLGALVLHYAANSL 186
            + +L  LV HY  ++ 
Sbjct: 69  YFENLMQLVEHYTTDAD 85

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.9 bits (163), Expect = 1e-15
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 112 RMSRAQAEALLS---GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAE 166
            +SR +A  L+     R  G F+IR S T  G+  L+    G  KH  +     G    +
Sbjct: 11  TLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQ 70

Query: 167 PFNIYPSLGALVLHY 181
               + S+  ++ H+
Sbjct: 71  H-LWFQSVFDMLRHF 84

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 1e-15
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 112 RMSRAQAEALLS--GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            +SR++A   L   G   G FLIR S      Y LS+  + A +H  ++    G      
Sbjct: 8   CISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNE 67

Query: 168 FNIYPSLGALVLHYAANSL 186
              + SL  LV ++ A SL
Sbjct: 68  AVSFLSLPELVNYHRAQSL 86

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 2e-15
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
            ++  +AE LL  R  DG+FL RPS +  G   LS+  +GA  H  +  T   +      
Sbjct: 9   NITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGG- 67

Query: 169 NIYPSLGALVLHYAANSLEEHNDD 192
             + +L  LV +Y  +  +    +
Sbjct: 68  EKFATLAELVQYYMEHHGQLKEKN 91

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 1e-14
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 104 HDEKTWLV-RMSRAQAEALL--SGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETE 159
           H++  W   ++SR ++E ++    + +G FLIR     G YAL ++  G   H  + + +
Sbjct: 26  HEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDK 85

Query: 160 RGFGFAEPFNIYPSLGALVLHYAANSL 186
            G         + +L  LV HY+  + 
Sbjct: 86  TGKLSIPEGKKFDTLWQLVEHYSYKAD 112

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-14
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRP-STTGQYALSIVCSGAPKHCLVYETERG-FGFAEPFN 169
            +SR  AE LL  +P G+FLIR   +   Y LS     +  H +V   + G F       
Sbjct: 15  AISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKV 74

Query: 170 IYPSLGALVLHYAANSLEEHNDDL 193
            + SL ALV  +    +E   + L
Sbjct: 75  AHTSLDALVTFHQQKPIEPRRELL 98

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.9 bits (155), Expect = 2e-14
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 104 HDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPSTTGQ-YALSIVCSGAPKHCLVYETER 160
           H+ K W    ++RAQAE +L   P DG FL+R       YA+S    G  KHC V +  +
Sbjct: 6   HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQ 65

Query: 161 GFGFAEPFNIYPSLGALVLHYAANSL 186
                     + SL  L+ +Y  + L
Sbjct: 66  TVMLGNSE--FDSLVDLISYYEKHPL 89

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 3e-14
 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            +SRA+AE  L  +G  DG FL+R      G Y LS+V      H  +     G      
Sbjct: 12  SISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAG 71

Query: 168 FNIYPSLGALVLHYAANSL 186
              +     L   Y+ +  
Sbjct: 72  GKAHCGPAELCEFYSRDPD 90

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 3e-14
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEP 167
            ++R +AE  L   G  DG +L+R S    G +ALS+       H  +     G      
Sbjct: 11  NITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAG 70

Query: 168 FNIYPSLGALVLHYAANS 185
              + S   L  +++  S
Sbjct: 71  GRTHASPADLCHYHSQES 88

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 7e-14
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVYETERGF 162
            +SR  AE  L   G   G+FLIR S +  G ++LS+           KH  +   + G 
Sbjct: 10  NLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGG 69

Query: 163 GFAEPFNIYPSLGALVLHYAANSL 186
            +  P   +P L  LV HY   S 
Sbjct: 70  FYISPRITFPGLHELVRHYTNASD 93

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 8e-14
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 112 RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 168
           ++SR   E LL     DG++L+R S +  G Y L ++  G      V +TE G   AE  
Sbjct: 10  KISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETA 69

Query: 169 -----NIYPSLGALVLHYAANSL 186
                  +  +  L+  +     
Sbjct: 70  PGVHKRYFRKIKNLISAFQKPDQ 92

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.4 bits (151), Expect = 1e-13
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGF-----G 163
            +++ + EALL  G  DG FLIR S +  G   L +          ++  + G+      
Sbjct: 9   CLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETD 68

Query: 164 FAEPFNIYPSLGALVLHYAANS 185
              P  I+P+L  LV  Y    
Sbjct: 69  AHTPRTIFPNLQELVSKYGKPG 90

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 1e-13
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 14/98 (14%)

Query: 112 RMSRAQAEALLSGR-PDGTFLIRPSTT--GQYALSIVCSGAP----------KHCLVYET 158
            +S  +AE LL+ +   G+FL+R S +  G + LS+                 H ++   
Sbjct: 6   HLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQ 65

Query: 159 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLIFL 196
           E  +        + SL  LV HY  N + E    ++ L
Sbjct: 66  ELKYDVGGG-ERFDSLTDLVEHYKKNPMVETLGTVLQL 102

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-13
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCS-----GAPKHCLVYETERGF 162
           +++R ++E LL  +  P GTFL+R S T  G Y LS+           KH  + + + G 
Sbjct: 11  KITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGG 70

Query: 163 GFAEPFNIYPSLGALVLHYAANSL 186
            +      + SL  LV +Y+ ++ 
Sbjct: 71  FYITSRTQFNSLQQLVAYYSKHAD 94

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 61.1 bits (148), Expect = 5e-13
 Identities = 16/82 (19%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 112 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVC---SGAPKHCLVYETERGFGFAE 166
            M R +    L  +  GTF+IR S    GQ+ ++ +        KH LV   +       
Sbjct: 15  YMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAAAKKT 74

Query: 167 PFNIYPSLGALVLHYAANSLEE 188
             +        V          
Sbjct: 75  FPDFLSEHSQFVNLLQWTKDTN 96

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 5e-13
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCSGAP-----KHCLVYETERGF 162
            +SR  AE  L   G   G+F+IR S T  G Y+LS+           KH  +   + G 
Sbjct: 7   GISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGG 66

Query: 163 GFAEPFNIYPSLGALVLHYAANSL 186
            +  P + + +L  LV HY   + 
Sbjct: 67  FYISPRSTFSTLQELVDHYKKGND 90

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 1e-12
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCS-----GAPKHCLVYETERGF 162
           ++ R  AE  L   G P GTFLIR S T  G Y+LSI           KH  + + + G 
Sbjct: 12  KLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGG 71

Query: 163 GFAEPFNIYPSLGALVLHYAANSL 186
            +      + +L  LV HY+  + 
Sbjct: 72  YYITTRAQFETLQQLVQHYSERAA 95

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.2 bits (143), Expect = 4e-12
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 113 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 169
           +S+ +  A+LS +P GTFL+R S +   G    + V         +          EP+ 
Sbjct: 14  ISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQS-------VEPYT 66

Query: 170 I----YPSLGALVLHYAANSLEEHND-DLIFL 196
                  S   +++ Y            L++L
Sbjct: 67  KQQLNNMSFAEIIMGYKIMDATNILVSPLVYL 98

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.9 bits (134), Expect = 4e-11
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 112 RMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIVCS----GAPKHCLVYETERGFG 163
            +SR  AE  L       G+FLIR S +  G ++LS+          KH  +   + G  
Sbjct: 18  TISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGY 77

Query: 164 FAEPFNIYPSLGALVLHYAANSL 186
           +  P   +P+L ALV HY+    
Sbjct: 78  YISPRITFPTLQALVQHYSKKGD 100

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.6 bits (123), Expect = 9e-10
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 112 RMSRAQAEALL-SGRPDGTFLIRPSTT-GQYALSIVCSGAP------KHCLVYETERGFG 163
            +SR +AE LL     +G F++R S T G Y +S+            KH  + ET     
Sbjct: 12  SISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPK 71

Query: 164 FAEPFN--IYPSLGALVLHYAANSL 186
                   ++ S+  L+ ++  N  
Sbjct: 72  RYYVAEKYVFDSIPLLIQYHQYNGG 96

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.93
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.93
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.93
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.93
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.92
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.92
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.92
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.92
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.92
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.92
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.91
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.91
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.91
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.91
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.91
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.91
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.9
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.9
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.9
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.89
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.89
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.89
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.89
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.89
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.88
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.88
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.86
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.85
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.85
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.84
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.78
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.39
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.31
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	97.18
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.83
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	96.71
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	96.63
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	96.56
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	96.54
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	96.48
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	96.48
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	96.46
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	96.41
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	96.4
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	96.39
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	96.32
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	96.3
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	96.3
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	96.26
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	96.18
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	96.1
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	96.08
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	96.06
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	96.0
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	95.99
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	95.91
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	95.9
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	95.89
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	95.82
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	95.81
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	95.74
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	95.59
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	95.49
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	95.44
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	95.34
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	95.31
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	95.23
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	95.2
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	95.19
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	95.17
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	95.14
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	95.02
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	94.68
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	94.66
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	94.26
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	94.18
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	94.05
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	93.88
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	93.38
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	93.17
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	92.53
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	89.51
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	85.83

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=2.8e-26  Score=167.29  Aligned_cols=95  Identities=58%  Similarity=0.995  Sum_probs=84.6

Q ss_pred             CCCCCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        100 DLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       100 ~l~~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      ++|+++.++||| .|+|++||++|++.++|+||||.| .++.|+||++..++|+||+|.+.++|++++.....|+||.+|
T Consensus         2 ~~p~~~~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~L   81 (107)
T d1qada_           2 DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL   81 (107)
T ss_dssp             CCGGGSGGGTEEEECCHHHHHHHHTTCCTTEEEEEEC---CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHH
T ss_pred             CCCccCCCcccCCCCCHHHHHHHHcCCCCCcEEEEecCCCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHH
Confidence            456788899999 999999999999889999999999 899999999999999999999988888887777789999999


Q ss_pred             HHHHhhCCccccccccc
Q psy13388        178 VLHYAANSLEEHNDDLI  194 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l~  194 (196)
                      |+||+++++..+...|.
T Consensus        82 I~~Y~~~~l~~~~~~l~   98 (107)
T d1qada_          82 VLHYQHTSLVQHNDSLN   98 (107)
T ss_dssp             HHHHHHSCGGGTCTTCC
T ss_pred             HHHHHhCccccccCCCc
Confidence            99999999988776553

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=2.9e-26  Score=165.52  Aligned_cols=90  Identities=26%  Similarity=0.344  Sum_probs=82.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      |+.++||| .|+|++||++|++.++|+||||+|  .+|.|+||++.+++|+||+|.+..+|.|++.....|+||.+||+|
T Consensus         2 Le~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~   81 (101)
T d1opka2           2 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHH   81 (101)
T ss_dssp             GGGSTTEEEECCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHH
T ss_pred             cccCcccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHHHH
Confidence            56789999 999999999999889999999999  788999999999999999999988888998887889999999999


Q ss_pred             HhhCCcccccccc
Q psy13388        181 YAANSLEEHNDDL  193 (196)
Q Consensus       181 Y~~~~l~~~~~~l  193 (196)
                      |+.++++++..+.
T Consensus        82 y~~~~~~l~~~L~   94 (101)
T d1opka2          82 HSTVADGLITTLH   94 (101)
T ss_dssp             HTTCCTTSSSCCC
T ss_pred             HhhCCCCCceECC
Confidence            9999998876543

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9e-26  Score=162.00  Aligned_cols=89  Identities=22%  Similarity=0.314  Sum_probs=80.2

Q ss_pred             cCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      +.+|||| .|+|++||++|++..+|+||||+|  .+|.|+|||+.+++|+||+|...+ |.|++.+...|+||.+||+||
T Consensus         2 s~~PWy~g~isR~eAe~~L~~~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~-~~~~~~~~~~F~sl~~LI~~y   80 (97)
T d1jwoa_           2 SLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRD-GHLTIDEAVFFCNLMDMVEHY   80 (97)
T ss_dssp             TTCTTEEESCCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESS-SEESSTTSCCBSCHHHHHHHH
T ss_pred             CcCCccCCCCCHHHHHHHhcCCCCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcC-CcEEecCCcccCCHHHHHHHH
Confidence            4579999 999999999999889999999999  789999999999999999998754 567777778999999999999


Q ss_pred             hhCCccccccccc
Q psy13388        182 AANSLEEHNDDLI  194 (196)
Q Consensus       182 ~~~~l~~~~~~l~  194 (196)
                      ++++++++.++..
T Consensus        81 ~~~~~~L~~~L~~   93 (97)
T d1jwoa_          81 SKDKGAICTKLVR   93 (97)
T ss_dssp             HHCCTTSSSCCCC
T ss_pred             hhCCCCCCccCCc
Confidence            9999999887654

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.6e-26  Score=163.25  Aligned_cols=88  Identities=27%  Similarity=0.324  Sum_probs=79.4

Q ss_pred             Cccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        106 EKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       106 ~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++|||| .|+|++||++|+.  .++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||+|
T Consensus         1 sepWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~   80 (100)
T d1rjaa_           1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY   80 (100)
T ss_dssp             CCCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHH
T ss_pred             CCCCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHHH
Confidence            369999 9999999999973  58999999999  788999999999999999999988888888777889999999999


Q ss_pred             HhhCCcccccccc
Q psy13388        181 YAANSLEEHNDDL  193 (196)
Q Consensus       181 Y~~~~l~~~~~~l  193 (196)
                      |+.++++++..+.
T Consensus        81 y~~~~~~~~~~L~   93 (100)
T d1rjaa_          81 HRAQSLSHGLRLA   93 (100)
T ss_dssp             HHHCCTTSSSCCC
T ss_pred             HhhCCCCCccCcC
Confidence            9999998876543

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-25  Score=161.87  Aligned_cols=89  Identities=26%  Similarity=0.377  Sum_probs=79.4

Q ss_pred             cCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      +..|||| .|+|++||++|++.++|+||||+|  .+|.|+|||+.+++|+||+|...++ .|++.+...|+||.+||+||
T Consensus         2 ~~~PWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~-~~~~~~~~~F~sl~~LV~~y   80 (101)
T d1k9aa2           2 SLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHAS-KLSIDEEVYFENLMQLVEHY   80 (101)
T ss_dssp             ESCTTBCTTCCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETT-EEESSSSSCBSSHHHHHHHH
T ss_pred             CcCCccCCCCCHHHHHHHHcCCCCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCC-CceecCCcccCCHHHHHHHH
Confidence            4479999 999999999999889999999999  7889999999999999999988654 56666668899999999999


Q ss_pred             hhCCccccccccc
Q psy13388        182 AANSLEEHNDDLI  194 (196)
Q Consensus       182 ~~~~l~~~~~~l~  194 (196)
                      +++++++++.+..
T Consensus        81 ~~~~~gl~~~L~~   93 (101)
T d1k9aa2          81 TTDADGLCTRLIK   93 (101)
T ss_dssp             HHCCTTSSSCCCE
T ss_pred             hhCCCCCceeCCc
Confidence            9999999876643

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2.1e-25  Score=160.09  Aligned_cols=88  Identities=31%  Similarity=0.482  Sum_probs=80.0

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|.+.++|+||||.|  .+|.|+|||+.+++|+||+|.+..+|+|++.. ..|+||.+||+|
T Consensus         3 ~~~~~Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~-~~F~sl~~LV~~   81 (97)
T d1r1qa_           3 IEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT-EKFPSLNKLVDY   81 (97)
T ss_dssp             CSCCTTBCTTCCHHHHHHHHHTSCTTCEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSS-CCBSSHHHHHHH
T ss_pred             cccCCccCCCCCHHHHHHHHhcCCCCCEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCC-CCcCCHHHHHHH
Confidence            46679999 999999999999889999999999  78999999999999999999998888888775 789999999999


Q ss_pred             HhhCCccccccc
Q psy13388        181 YAANSLEEHNDD  192 (196)
Q Consensus       181 Y~~~~l~~~~~~  192 (196)
                      |+++++......
T Consensus        82 y~~~~l~~~~~~   93 (97)
T d1r1qa_          82 YRTTSISKQKQV   93 (97)
T ss_dssp             TTTSCSCSSSCC
T ss_pred             HccCCcCCCCCe
Confidence            999999765543

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=161.26  Aligned_cols=90  Identities=31%  Similarity=0.448  Sum_probs=79.7

Q ss_pred             CcCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCc-----ceEEEEEEecCCeEEecCCCcCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGA-----PKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~-----vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      ++.++||| .|+|++||++|.  ++++|+||||.|  .+|.|+||++..+.     |+||+|...++|.|++.....|+|
T Consensus         1 le~~pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~s   80 (105)
T d1lkka_           1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPG   80 (105)
T ss_dssp             CCCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSS
T ss_pred             CccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCC
Confidence            35689999 999999999994  468999999999  78999999987433     899999998888899988788999


Q ss_pred             HHHHHHHHhhCCcccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l  193 (196)
                      |.+||+||+++++++++++.
T Consensus        81 l~~LV~~y~~~~~gL~~~L~  100 (105)
T d1lkka_          81 LHELVRHYTNASDGLCTRLS  100 (105)
T ss_dssp             HHHHHHHHHHCCTTSSSCCC
T ss_pred             HHHHHHHHhhCCCCCCccCC
Confidence            99999999999999988654

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.4e-25  Score=159.58  Aligned_cols=86  Identities=31%  Similarity=0.454  Sum_probs=77.0

Q ss_pred             Cccccc-cCCHHHHHHHHh-CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        106 EKTWLV-RMSRAQAEALLS-GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       106 ~~~Wy~-~isR~eAe~lL~-~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      ++|||| .|+|++||++|. ..++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|+|++.. ..|+||.+||+||
T Consensus         2 s~pWy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~-~~F~sl~~LV~~y   80 (96)
T d1jyra_           2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV-VKFNSLNELVDYH   80 (96)
T ss_dssp             CCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSS-CEESSHHHHHHHT
T ss_pred             CCCccCCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCC-ccCCCHHHHHHHH
Confidence            369999 999999999996 468999999999  78999999999999999999998888777765 6799999999999


Q ss_pred             hhCCccccccc
Q psy13388        182 AANSLEEHNDD  192 (196)
Q Consensus       182 ~~~~l~~~~~~  192 (196)
                      +++++......
T Consensus        81 ~~~~l~~~~~~   91 (96)
T d1jyra_          81 RSTSVSRNQQI   91 (96)
T ss_dssp             TSSCSCSSSCC
T ss_pred             hhCCCCCCCcE
Confidence            99999876643

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.7e-25  Score=165.65  Aligned_cols=89  Identities=20%  Similarity=0.155  Sum_probs=80.5

Q ss_pred             cCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      +.+|||| .|+|++||++|..  .++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||+
T Consensus         3 ~~~PWyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~   82 (129)
T d1a81a1           3 NHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCH   82 (129)
T ss_dssp             TSSTTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             CCCCcccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHH
Confidence            3469999 9999999999963  58999999999  78999999999999999999988888899887788999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+.+++++++.+.
T Consensus        83 ~Y~~~~~gl~~~L~   96 (129)
T d1a81a1          83 YHSQESDGLVCLLK   96 (129)
T ss_dssp             HHTTCCTTSSSCCC
T ss_pred             HHhhCCCCCcccCC
Confidence            99999999877554

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.1e-25  Score=159.57  Aligned_cols=91  Identities=30%  Similarity=0.446  Sum_probs=81.1

Q ss_pred             CCcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYP  172 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~  172 (196)
                      +++.++||| .|+|++||++|..  +++|+||||+|  .+|.|+||++.     .+.|+||+|...++|.|++.....|+
T Consensus         2 ~l~~~~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~   81 (104)
T d1g83a2           2 SIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFE   81 (104)
T ss_dssp             SGGGSSSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEES
T ss_pred             ccccCCCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccC
Confidence            357789999 9999999999964  58999999999  78999999986     46699999998888888888778899


Q ss_pred             CHHHHHHHHhhCCcccccccc
Q psy13388        173 SLGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       173 sL~dLI~hY~~~~l~~~~~~l  193 (196)
                      ||.+||+||+++++++++++.
T Consensus        82 sl~~LV~~y~~~~~gL~~~L~  102 (104)
T d1g83a2          82 TLQQLVQHYSERAAGLSSRLV  102 (104)
T ss_dssp             SHHHHHHHHHHCCTTSSSCCC
T ss_pred             CHHHHHHHHhhCCCCCceeCC
Confidence            999999999999999988764

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8e-25  Score=163.74  Aligned_cols=91  Identities=25%  Similarity=0.322  Sum_probs=82.2

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      ++.+|||| .|+|++||++|+.  .++|+||||.| .++.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||+
T Consensus        26 ~e~~pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~  105 (124)
T d2oq1a2          26 HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE  105 (124)
T ss_dssp             GGGSTTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHH
T ss_pred             ccCCCCccCCCCHHHHHHHHhhcCCCCceEEeEecCCCCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHHH
Confidence            35679999 9999999999974  58899999999 88999999999999999999998888899887788999999999


Q ss_pred             HHhhCCccccccccc
Q psy13388        180 HYAANSLEEHNDDLI  194 (196)
Q Consensus       180 hY~~~~l~~~~~~l~  194 (196)
                      ||+.+++++.+.+..
T Consensus       106 ~y~~~~~gL~~~L~~  120 (124)
T d2oq1a2         106 YLKLKADGLIYCLKE  120 (124)
T ss_dssp             HHHHCCTTSSSCCCS
T ss_pred             HHhhCCCCCcccCCC
Confidence            999999998876543

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=163.18  Aligned_cols=90  Identities=24%  Similarity=0.388  Sum_probs=81.1

Q ss_pred             CcCccccc-cCCHHHHHHHHh--CCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      ++.+|||| .|+|++||++|.  +.++|+||||.| .++.|+|||+.+++|+||+|.+..+|+|++.....|+||.+||+
T Consensus        26 he~~pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~  105 (125)
T d1a81a2          26 HEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVE  105 (125)
T ss_dssp             GGGSTTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHH
T ss_pred             cccCCccCCCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHHH
Confidence            45679999 999999999995  468999999999 88999999999999999999998888888887788999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+.++.++.+++.
T Consensus       106 ~y~~~~~gL~~~L~  119 (125)
T d1a81a2         106 HYSYKADGLLRVLT  119 (125)
T ss_dssp             HHTTCCTTSSSCCC
T ss_pred             HHhhCCCCCCccCC
Confidence            99999988876543

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=158.46  Aligned_cols=90  Identities=28%  Similarity=0.405  Sum_probs=79.4

Q ss_pred             CcCccccc-cCCHHHHHHHHhC--CCCceEEEeeC--CCCCeEEEeeeCC-----cceEEEEEEecCCeEEecCCCcCCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSG-----APKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~--~~~G~FLVR~S--~~g~y~LSvr~~~-----~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      ++.++||| .|+|++||++|+.  .++|+||||+|  .+|.|+||++..+     .|+||+|.+.++|.|++.....|+|
T Consensus         2 l~~~~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~s   81 (106)
T d1o48a_           2 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNS   81 (106)
T ss_dssp             GGGSTTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESS
T ss_pred             cccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECC
Confidence            56789999 9999999999963  58999999999  7899999998743     5789999888888899887788999


Q ss_pred             HHHHHHHHhhCCcccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l  193 (196)
                      |.+||+||+++++++++++.
T Consensus        82 l~eLV~~y~~~~~gL~~~L~  101 (106)
T d1o48a_          82 LQQLVAYYSKHADGLCHRLT  101 (106)
T ss_dssp             HHHHHHHHTTCCTTSSSCCC
T ss_pred             HHHHHHHHhhCCCCCCccCC
Confidence            99999999999999887653

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-24  Score=162.44  Aligned_cols=89  Identities=24%  Similarity=0.220  Sum_probs=80.6

Q ss_pred             cCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      +.+|||| .|+|++||++|+  ++++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++.....|+||.+||+
T Consensus         4 ~~~pWy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~   83 (130)
T d2oq1a1           4 AHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE   83 (130)
T ss_dssp             TTCTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             cCCCCccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHH
Confidence            3469999 999999999997  368999999999  88999999999999999999988888888877778999999999


Q ss_pred             HHhhCCcccccccc
Q psy13388        180 HYAANSLEEHNDDL  193 (196)
Q Consensus       180 hY~~~~l~~~~~~l  193 (196)
                      ||+.+++++++.+.
T Consensus        84 ~Y~~~~~gL~~~L~   97 (130)
T d2oq1a1          84 FYSRDPDGLPCNLR   97 (130)
T ss_dssp             HHHHCCTTSSSCCC
T ss_pred             HHhhCCCCCCccCC
Confidence            99999999877654

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.5e-24  Score=159.58  Aligned_cols=91  Identities=29%  Similarity=0.416  Sum_probs=80.6

Q ss_pred             CCcCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeee----CCcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVC----SGAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~----~~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .++.++||| .|+|++||++|.  .+++|+||||+|  .+|.|+|||+.    ++.|+||+|.+.++|.|++.....|+|
T Consensus         8 ~l~~e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~s   87 (114)
T d1blja_           8 TLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPT   87 (114)
T ss_dssp             CSCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESS
T ss_pred             ccccCCCcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECC
Confidence            467789999 999999999995  468999999999  78999999985    356899999998888889887778999


Q ss_pred             HHHHHHHHhhCCcccccccc
Q psy13388        174 LGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~~~~l  193 (196)
                      |.|||+||+++++++++++.
T Consensus        88 l~eLV~~y~~~~~gL~~~L~  107 (114)
T d1blja_          88 LQALVQHYSKKGDGLCQKLT  107 (114)
T ss_dssp             HHHHHHHHHHCCSSSSSCCC
T ss_pred             HHHHHHHHhhCCCCCCccCC
Confidence            99999999999999988654

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.6e-24  Score=156.91  Aligned_cols=87  Identities=25%  Similarity=0.355  Sum_probs=76.9

Q ss_pred             ccccc-cCCHHHHHHHHh-CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-----CCcCCCHHHH
Q psy13388        107 KTWLV-RMSRAQAEALLS-GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-----FNIYPSLGAL  177 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~-~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-----~~~F~sL~dL  177 (196)
                      +|||| .|+|++||++|. ..++|+||||+|  .+|.|+|||+.+++|+||+|.+..+|.|++..     ...|+||.+|
T Consensus         3 ~PWy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~L   82 (103)
T d1i3za_           3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQEL   82 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHH
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHH
Confidence            58999 999999999995 568999999999  89999999999999999999988888877643     2469999999


Q ss_pred             HHHHhhCCcccccccc
Q psy13388        178 VLHYAANSLEEHNDDL  193 (196)
Q Consensus       178 I~hY~~~~l~~~~~~l  193 (196)
                      |+||++++.++++.+.
T Consensus        83 V~~y~~~~~gl~~~L~   98 (103)
T d1i3za_          83 VSKYGKPGQGLVVHLS   98 (103)
T ss_dssp             HHHTTSSSSSSSSCCC
T ss_pred             HHHhhhCCCCCeEeCC
Confidence            9999999999877654

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.6e-24  Score=155.48  Aligned_cols=87  Identities=30%  Similarity=0.427  Sum_probs=78.0

Q ss_pred             ccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeee-----CCcceEEEEEEecCCeEEecCCCcCCCHHH
Q psy13388        107 KTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVC-----SGAPKHCLVYETERGFGFAEPFNIYPSLGA  176 (196)
Q Consensus       107 ~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~-----~~~vkH~rI~~~~~g~~~~~~~~~F~sL~d  176 (196)
                      ++||| .|+|++||++|.  +.++|+||||+|  .+|.|+|||+.     +++|+||+|...++|.|++.....|+||.+
T Consensus         1 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~   80 (103)
T d1qcfa2           1 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQE   80 (103)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHH
T ss_pred             CCccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHH
Confidence            47999 999999999994  468999999999  78999999985     477999999998888889887788999999


Q ss_pred             HHHHHhhCCcccccccc
Q psy13388        177 LVLHYAANSLEEHNDDL  193 (196)
Q Consensus       177 LI~hY~~~~l~~~~~~l  193 (196)
                      ||+||+++++++++++.
T Consensus        81 LV~~y~~~~~gL~~~L~   97 (103)
T d1qcfa2          81 LVDHYKKGNDGLCQKLS   97 (103)
T ss_dssp             HHHHHTSSCTTSSSCCC
T ss_pred             HHHHHhhCCCCCCccCC
Confidence            99999999999887654

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.2e-24  Score=154.59  Aligned_cols=89  Identities=22%  Similarity=0.306  Sum_probs=74.4

Q ss_pred             cCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCC---eEEecC-CCcCCCHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERG---FGFAEP-FNIYPSLG  175 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g---~~~~~~-~~~F~sL~  175 (196)
                      +.++||| .|+|++||++|.  +.++|+||||+|  .+|.|+|||+.+++|+||+|....++   .|++.. ...|+||.
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~   82 (105)
T d1nrva_           3 RTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLI   82 (105)
T ss_dssp             TTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHH
T ss_pred             ccCcccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHH
Confidence            5689999 999999999996  468999999999  78999999999999999999886543   244443 46799999


Q ss_pred             HHHHHHhhCCcccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l  193 (196)
                      +||+||+++++++++.+.
T Consensus        83 ~LV~~y~~~~~~L~~~L~  100 (105)
T d1nrva_          83 QLVDFYQLNKGVLPCKLK  100 (105)
T ss_dssp             HHHHHHTTCCTTSSSCCC
T ss_pred             HHHHHhccCcCCCCccCC
Confidence            999999999998877543

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.8e-24  Score=153.52  Aligned_cols=89  Identities=25%  Similarity=0.273  Sum_probs=77.9

Q ss_pred             cCccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEec-----CCCcCCCHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAE-----PFNIYPSLG  175 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~-----~~~~F~sL~  175 (196)
                      +.+|||| .|+|++||++|+. ..+|+||||+|  .+|.|+||++.+++++||+|.+..+|.+++.     ....|+||.
T Consensus         2 e~~pwyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~   81 (104)
T d1d4ta_           2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK   81 (104)
T ss_dssp             TTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHH
T ss_pred             CcCCccccCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHH
Confidence            5679999 9999999999964 56899999999  7899999999999999999999888877653     236799999


Q ss_pred             HHHHHHhhCCcccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l  193 (196)
                      +||+||++++++++..+.
T Consensus        82 ~Li~~y~~~~~gl~~~L~   99 (104)
T d1d4ta_          82 NLISAFQKPDQGIVIPLQ   99 (104)
T ss_dssp             HHHHHHTSSSSSSSSCCC
T ss_pred             HHHHHHhhCCCCCcEeCC
Confidence            999999999998876554

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=2.6e-24  Score=156.56  Aligned_cols=88  Identities=31%  Similarity=0.440  Sum_probs=76.3

Q ss_pred             CcCccccc-cCCHHHHHHHHhCC-CCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGR-PDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~-~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      ++.++||| .|+|++||++|... .+|+||||.| .++.|+|||+.+++|+||+|.+. ++.|.++ ...|.||.+||+|
T Consensus         6 he~~~Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S~~~~~yvLSv~~~~~v~H~~I~~~-~~~~~~~-~~~F~sl~~LV~~   83 (105)
T d2fcia1           6 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQE-GQTVMLG-NSEFDSLVDLISY   83 (105)
T ss_dssp             TSSSCCCCSSSCSHHHHHHHHHSSSSCCEEEEECSSTTCEEEEEEETTEECCCEEBCC-SSCEECS-SSEESTTHHHHHH
T ss_pred             cccCCCccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCEEEEEEeccccEEEEEEec-CCeEecC-CcccCCHHHHHHH
Confidence            46789999 99999999999754 5899999999 99999999999999999999764 4455555 4789999999999


Q ss_pred             HhhCCcccccccc
Q psy13388        181 YAANSLEEHNDDL  193 (196)
Q Consensus       181 Y~~~~l~~~~~~l  193 (196)
                      |+++++++..++.
T Consensus        84 y~~~~~~~~~~L~   96 (105)
T d2fcia1          84 YEKHPLYRKMKLR   96 (105)
T ss_dssp             HHHSCCSTTCSSC
T ss_pred             HhhCCCCCccCCC
Confidence            9999998876554

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.2e-24  Score=155.31  Aligned_cols=90  Identities=24%  Similarity=0.277  Sum_probs=77.5

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCC----CcCCCHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPF----NIYPSLG  175 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~----~~F~sL~  175 (196)
                      .++.++||| .|+|++||++|++.++|+||||+|  .++.|+||++.+++|+||+|...+ |.|.+...    ..|+||.
T Consensus         7 ~l~~~~Wy~g~isR~~Ae~lL~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~-~~~~l~~~~~~~~~F~sl~   85 (112)
T d2izva2           7 QINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWN-HNFSFDAHDPCVFHSPDIT   85 (112)
T ss_dssp             HHHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEET-TEEESCTTCTTSCCBSSHH
T ss_pred             HhccCCCcCCCCCHHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEecCCceEEEEEEeC-CeEEEeecccCcccCCCHH
Confidence            356789999 999999999999889999999999  788999999999999999998865 55555432    3699999


Q ss_pred             HHHHHHhhCCcccccccc
Q psy13388        176 ALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       176 dLI~hY~~~~l~~~~~~l  193 (196)
                      +||+||+++++++....+
T Consensus        86 ~LV~~Y~~~~~~~~~~~l  103 (112)
T d2izva2          86 GLLEHYKDPSACMFFEPL  103 (112)
T ss_dssp             HHHHHTCCGGGCCTTSCC
T ss_pred             HHHHHHhcccccccCccc
Confidence            999999999998866544

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-23  Score=152.85  Aligned_cols=85  Identities=27%  Similarity=0.393  Sum_probs=74.0

Q ss_pred             Cccccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHHH
Q psy13388        106 EKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHY  181 (196)
Q Consensus       106 ~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~hY  181 (196)
                      +++||| .|+|++||++|.. ..+|+||||+|  .+|.|+|||+.+++|+||+|...++ .|++.....|+||.+||+||
T Consensus         2 ~~~Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~-~~~~~~~~~F~sl~~LV~~y   80 (109)
T d2shpa2           2 SRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGD-YYDLYGGEKFATLAELVQYY   80 (109)
T ss_dssp             CSTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSS-CEEETTSCEESSHHHHHHHH
T ss_pred             CCccccCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCC-eEEEcCCcccCCHHHHHHHH
Confidence            468999 9999999999965 46899999999  8899999999999999999987654 55655568899999999999


Q ss_pred             hhCCcccccc
Q psy13388        182 AANSLEEHND  191 (196)
Q Consensus       182 ~~~~l~~~~~  191 (196)
                      +++++.+...
T Consensus        81 ~~~~~~~~~~   90 (109)
T d2shpa2          81 MEHHGQLKEK   90 (109)
T ss_dssp             HTCTTCSBSS
T ss_pred             HHCCCCcccC
Confidence            9998877553

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5e-24  Score=154.72  Aligned_cols=85  Identities=34%  Similarity=0.522  Sum_probs=74.9

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .++.+|||| .|+|++||++|+  ++|+||||.|  .+|.|+|||+.+++|+||+|.. .+|.|++.. ..|+||.|||+
T Consensus         3 ~l~~~pWyhG~i~R~~Ae~lL~--~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~-~~~~~~~~~-~~F~sl~~LV~   78 (104)
T d1mila_           3 QLRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVD-PEGVVRTKD-HRFESVSHLIS   78 (104)
T ss_dssp             STTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBC-TTSSEECSS-CEESSHHHHHH
T ss_pred             ccccCCCcCCCCCHHHHHHHHh--cCCcEEEEecCCCCCCEEEEEEEccccceEEEEe-CCCEEEeCC-eeECCHHHHHH
Confidence            367789999 999999999996  7999999999  8899999999999999999966 456677664 78999999999


Q ss_pred             HHhhCCcccccc
Q psy13388        180 HYAANSLEEHND  191 (196)
Q Consensus       180 hY~~~~l~~~~~  191 (196)
                      ||+.+++++...
T Consensus        79 ~y~~~~~~~~~~   90 (104)
T d1mila_          79 YHMDNHLPIISA   90 (104)
T ss_dssp             HHHHHTCCEEET
T ss_pred             HHhhCCCCcccC
Confidence            999999876544

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2e-23  Score=152.33  Aligned_cols=90  Identities=24%  Similarity=0.316  Sum_probs=77.8

Q ss_pred             CcCccccc-cCCHHHHHHHHhC-CCCceEEEeeC-CCCCeEEEeeeC------CcceEEEEEEecCC--eEEecCCCcCC
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG-RPDGTFLIRPS-TTGQYALSIVCS------GAPKHCLVYETERG--FGFAEPFNIYP  172 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S-~~g~y~LSvr~~------~~vkH~rI~~~~~g--~~~~~~~~~F~  172 (196)
                      ++.++||| .|+|++||++|.. .++|+||||+| .+|.|+|||+..      +.|+||+|....+|  .|++.....|+
T Consensus         3 l~~~~Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~   82 (108)
T d1luia_           3 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFD   82 (108)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHHCCTTEEEEEECCTTTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBS
T ss_pred             cccCCCcCCCCCHHHHHHHHHhcCCCCeEEEEecCCCCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccC
Confidence            57789999 9999999999964 58899999999 899999999863      45899999886654  47777778899


Q ss_pred             CHHHHHHHHhhCCcccccccc
Q psy13388        173 SLGALVLHYAANSLEEHNDDL  193 (196)
Q Consensus       173 sL~dLI~hY~~~~l~~~~~~l  193 (196)
                      ||.+||+||+++++++++.+.
T Consensus        83 sl~~LV~~y~~~~~~L~~~L~  103 (108)
T d1luia_          83 SIPLLIQYHQYNGGGLVTRLR  103 (108)
T ss_dssp             SHHHHHHHHHTTCCSSSSSSS
T ss_pred             CHHHHHHHHhhCCCCCccCCC
Confidence            999999999999999877654

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-23  Score=151.72  Aligned_cols=89  Identities=26%  Similarity=0.297  Sum_probs=74.7

Q ss_pred             CcCccccc-cCCHHHHHHHHh--CCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCC-e--EEecC-CCcCCCH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLS--GRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERG-F--GFAEP-FNIYPSL  174 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~--~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g-~--~~~~~-~~~F~sL  174 (196)
                      +..++||| .|+|++||++|.  +.++|+||||+|  .+|.|+|||+.+++|+||+|...+++ .  |.+.. ...|+||
T Consensus         7 h~~~~Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl   86 (113)
T d2qmsa1           7 HRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDL   86 (113)
T ss_dssp             TTCCTTEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSH
T ss_pred             hcCCCccCCCCCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCH
Confidence            45679999 999999999996  468999999999  77999999999999999999875543 2  33443 3569999


Q ss_pred             HHHHHHHhhCCccccccc
Q psy13388        175 GALVLHYAANSLEEHNDD  192 (196)
Q Consensus       175 ~dLI~hY~~~~l~~~~~~  192 (196)
                      .+||+||+++++++.+.+
T Consensus        87 ~~LI~~y~~~~~~L~~~L  104 (113)
T d2qmsa1          87 LQLVEFHQLNRGILPCLL  104 (113)
T ss_dssp             HHHHHHHTTCCTTSSSCC
T ss_pred             HHHHHHhccCCCCCcccc
Confidence            999999999998876644

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-22  Score=147.67  Aligned_cols=89  Identities=30%  Similarity=0.359  Sum_probs=77.0

Q ss_pred             cCccccc-cCCHHHHHHHHhCCCCceEEEeeC-CCCCeEEEeeeCCcceEEEEEEecCCeEEec-CCCcCCCHHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS-TTGQYALSIVCSGAPKHCLVYETERGFGFAE-PFNIYPSLGALVLHY  181 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S-~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~-~~~~F~sL~dLI~hY  181 (196)
                      ..++||| .|+|++||++|++.++|+||||.| ....|+|+++..++++||+|...++|.|++. ....|+||.+||+||
T Consensus         7 ~~~pWy~g~isR~eAe~lL~~~~~G~FLvR~S~~~~~y~Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y   86 (106)
T d2cs0a1           7 GVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFH   86 (106)
T ss_dssp             SCCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSSSSEEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHH
T ss_pred             CCCCCccCCCCHHHHHHHHcCCCCCcEEEEecCCCCCEEEEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHH
Confidence            4479999 999999999999889999999999 6666999999999999999999888877764 445799999999999


Q ss_pred             hhCCcccccccc
Q psy13388        182 AANSLEEHNDDL  193 (196)
Q Consensus       182 ~~~~l~~~~~~l  193 (196)
                      +++++.....+|
T Consensus        87 ~~~~~~~~~~~L   98 (106)
T d2cs0a1          87 QQKPIEPRRELL   98 (106)
T ss_dssp             TTSCCSSCCCCC
T ss_pred             HHCCCCCccCcc
Confidence            999985444333

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=5e-24  Score=149.42  Aligned_cols=79  Identities=24%  Similarity=0.409  Sum_probs=66.9

Q ss_pred             CcCccccc-cCCHHHHHHHHhC---CCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHH
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSG---RPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGAL  177 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~---~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dL  177 (196)
                      +..+|||| .|+|++||++|+.   .++|+||||+|  .+|.|+|||+.+++|+||+|.+.++|++++.. ..|+||.+|
T Consensus         2 l~~~pWyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~-~~F~sl~~L   80 (86)
T d1rpya_           2 LSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQH-LWFQSVFDM   80 (86)
T ss_dssp             GGGSTTBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCHHHHH-HHHHHHHHH
T ss_pred             CccCcccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceEEeCC-CeeCCHHHH
Confidence            45689999 9999999999975   36899999999  78999999999999999999998888766664 789999999


Q ss_pred             HHHHhh
Q psy13388        178 VLHYAA  183 (196)
Q Consensus       178 I~hY~~  183 (196)
                      |+||+.
T Consensus        81 V~~y~t   86 (86)
T d1rpya_          81 LRHFHT   86 (86)
T ss_dssp             HHHHTC
T ss_pred             HHhhcC
Confidence            999974

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3e-22  Score=144.48  Aligned_cols=81  Identities=22%  Similarity=0.301  Sum_probs=70.0

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecC-------CCcCC
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEP-------FNIYP  172 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~-------~~~F~  172 (196)
                      .++.++||| .|+|++||++|++.++|+||||.|  .++.|+||++.+++|+||+|...++ .|.++.       ...|+
T Consensus        11 ~l~~~~Wy~g~i~R~~Ae~~L~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~-~~~~~~~~~~~~~~~~F~   89 (103)
T d2c9wa2          11 ELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDG-KFRLDSIICVKSKLKQFD   89 (103)
T ss_dssp             HHHHTSCBCTTCCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETT-EEEECTTTTTGGGCCCBS
T ss_pred             HHhhCCCcCCCCCHHHHHHHhcCCCCCceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCC-eEeeCCccccccCCCccC
Confidence            356689999 999999999999889999999999  7889999999999999999988654 444432       35699


Q ss_pred             CHHHHHHHHhhC
Q psy13388        173 SLGALVLHYAAN  184 (196)
Q Consensus       173 sL~dLI~hY~~~  184 (196)
                      ||.+||+||++.
T Consensus        90 sl~~LI~~y~~~  101 (103)
T d2c9wa2          90 SVVHLIDYYVQM  101 (103)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhh
Confidence            999999999875

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=7.9e-23  Score=149.38  Aligned_cols=89  Identities=26%  Similarity=0.415  Sum_probs=77.1

Q ss_pred             CCcCccccc-cCCHHHHHHHHhCCCCceEEEeeC---CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHH
Q psy13388        103 HHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS---TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALV  178 (196)
Q Consensus       103 ~l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S---~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI  178 (196)
                      .++.++||| .|+|++||++|++.++|+||||+|   .++.|+|+++.+++++||+|...+ |.|++.....|+||.+||
T Consensus         7 ~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~-~~~~~~~~~~F~sl~~LV   85 (111)
T d1fu6a_           7 SLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRD-GKYGFSDPLTFNSVVELI   85 (111)
T ss_dssp             CCSCCSSCCSSCCSHHHHHHSSSCSSCCCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTT-TCCCTTTTSCCCCTTHHH
T ss_pred             ccCcCcCCCCCCCHHHHHHHhCcCCCCEEEEEeccCCCCccEEEEEecCCceEEEEEEEcC-CeEEECCCcccCCHHHHH
Confidence            467789999 999999999999888999999998   356799999999999999998754 566777668899999999


Q ss_pred             HHHhhCCccccccc
Q psy13388        179 LHYAANSLEEHNDD  192 (196)
Q Consensus       179 ~hY~~~~l~~~~~~  192 (196)
                      +||+++++..+...
T Consensus        86 ~~y~~~~l~~~~~~   99 (111)
T d1fu6a_          86 NHYRNESLAQYNPK   99 (111)
T ss_dssp             HHHHTTCSTTTCSS
T ss_pred             HHHhhCcCCccCCC
Confidence            99999998765543

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.7e-22  Score=143.23  Aligned_cols=82  Identities=30%  Similarity=0.475  Sum_probs=70.7

Q ss_pred             cccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeE----------------EecCC
Q psy13388        108 TWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFG----------------FAEPF  168 (196)
Q Consensus       108 ~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~----------------~~~~~  168 (196)
                      .||| .|+|++||++|++.++|+||||+|  .++.|+||++.+++|+||+|.+..++..                ++.+.
T Consensus         1 sWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (109)
T d2eyva1           1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGD   80 (109)
T ss_dssp             TSCCBCCCHHHHHHHCSSCSTTCEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEETT
T ss_pred             CCCCCCCCHHHHHHHhcCCCCCeEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccceEEeCC
Confidence            4999 999999999998889999999999  7899999999999999999998665422                22234


Q ss_pred             CcCCCHHHHHHHHhhCCcccc
Q psy13388        169 NIYPSLGALVLHYAANSLEEH  189 (196)
Q Consensus       169 ~~F~sL~dLI~hY~~~~l~~~  189 (196)
                      ..|+||.+||+||+.+++..+
T Consensus        81 ~~F~sl~~LV~~y~~~~l~~~  101 (109)
T d2eyva1          81 QEFDSLPALLEFYKIHYLDTT  101 (109)
T ss_dssp             EEESSHHHHHHHSSSSCSSSS
T ss_pred             eeeCCHHHHHHHHhhCcCCCC
Confidence            579999999999999988653

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.2e-21  Score=138.24  Aligned_cols=81  Identities=30%  Similarity=0.414  Sum_probs=69.8

Q ss_pred             cccc-cCCHHHHHHHHhC-CCCceEEEeeC--CCCCeEEEeeeC----------CcceEEEEEEecCCeEEecCCCcCCC
Q psy13388        108 TWLV-RMSRAQAEALLSG-RPDGTFLIRPS--TTGQYALSIVCS----------GAPKHCLVYETERGFGFAEPFNIYPS  173 (196)
Q Consensus       108 ~Wy~-~isR~eAe~lL~~-~~~G~FLVR~S--~~g~y~LSvr~~----------~~vkH~rI~~~~~g~~~~~~~~~F~s  173 (196)
                      .||| .|+|++||++|+. .++|+||||+|  .+|.|+|||+..          +.++||+|...+ +.|++.....|+|
T Consensus         1 rWyhG~i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~-~~~~~~~~~~F~s   79 (108)
T d2shpa3           1 RWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQE-LKYDVGGGERFDS   79 (108)
T ss_dssp             TTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEET-TEEESSSSCCBSS
T ss_pred             CCCcCCCCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCC-CceEeCCCcccCC
Confidence            4999 9999999999974 58999999999  789999999974          457899997655 5677766789999


Q ss_pred             HHHHHHHHhhCCcccc
Q psy13388        174 LGALVLHYAANSLEEH  189 (196)
Q Consensus       174 L~dLI~hY~~~~l~~~  189 (196)
                      |.+||+||+++++...
T Consensus        80 l~~LV~~y~~~~l~~~   95 (108)
T d2shpa3          80 LTDLVEHYKKNPMVET   95 (108)
T ss_dssp             HHHHHHHHHHSCCBCT
T ss_pred             HHHHHHHHhhCCCCCC
Confidence            9999999999987654

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.6e-19  Score=137.42  Aligned_cols=82  Identities=24%  Similarity=0.377  Sum_probs=67.5

Q ss_pred             CcCccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHH-
Q psy13388        104 HDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVL-  179 (196)
Q Consensus       104 l~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~-  179 (196)
                      +..++||| .|+|++||++|.. ++|+||||+|  .+|.|+|||+.+++|+||+|.+  +|.+|+.+ ..|+||.|||. 
T Consensus        32 ~~~~~wyhG~isR~eAe~lL~~-~dGsFLVR~S~~~~g~y~LSv~~~~~v~H~~I~~--~g~~~~~~-~~F~sl~eLV~d  107 (141)
T d1xa6a2          32 KYYGREFHGIISREQADELLGG-VEGAYILRESQRQPGCYTLALRFGNQTLNYRLFH--DGKHFVGE-KRFESIHDLVTD  107 (141)
T ss_dssp             CSSCSSEEEECCHHHHHHHHCS-CTTBEEEEECSSSTTCEEEEEEETTEEEECCCEE--SSSEECSS-SCCCCSSHHHHH
T ss_pred             ccccceeeccCCHHHHHHHHcC-CCCeEEEEecCCCCCCEEEEEEECCEEEEEEEEE--CCCEEECC-CeECCHHHHHhh
Confidence            34468999 9999999999964 6899999999  7899999999999999999986  35566665 57999999874 


Q ss_pred             ----HHhhCCcccc
Q psy13388        180 ----HYAANSLEEH  189 (196)
Q Consensus       180 ----hY~~~~l~~~  189 (196)
                          +|+......+
T Consensus       108 gLv~~~~~~~~~~~  121 (141)
T d1xa6a2         108 GLITLYIETKAAEY  121 (141)
T ss_dssp             HHHHHHHHHSCHHH
T ss_pred             hhhhhhcccccccc
Confidence                6766555443

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.39  E-value=1.1e-13  Score=103.32  Aligned_cols=71  Identities=21%  Similarity=0.345  Sum_probs=59.2

Q ss_pred             Cccccc-cCCHHHHHHHHhCCCCceEEEeeC--CCCCeEEEeeeC---CcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        106 EKTWLV-RMSRAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCS---GAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       106 ~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~~g~y~LSvr~~---~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      ...||| .|+|++||++|++.++|+||||.|  .+|.|+||++..   ++|+||+|...+++       ..|.++.++|.
T Consensus         8 ~~~~~~G~isr~~ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~~-------~~~~sl~d~l~   80 (131)
T d1uura3           8 QEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA-------AAKKTFPDFLS   80 (131)
T ss_dssp             HHTSSCBSCCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB-------TTTBCHHHHHT
T ss_pred             hCCcEEccCCHHHHHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCCC-------cccccHHHHHH
Confidence            357999 999999999999889999999999  789999999974   77999999764432       45788888887


Q ss_pred             HHhh
Q psy13388        180 HYAA  183 (196)
Q Consensus       180 hY~~  183 (196)
                      .|..
T Consensus        81 ~~~~   84 (131)
T d1uura3          81 EHSQ   84 (131)
T ss_dssp             TCTT
T ss_pred             hHHH
Confidence            6543

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=2.4e-14  Score=108.19  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=66.3

Q ss_pred             cCccccc-cCCHHHHHHHHhCCCCceEEEeeC---CCCCeEEEeeeCCcceEEEEEEecCCeEEecCCCcCCCHHHHHHH
Q psy13388        105 DEKTWLV-RMSRAQAEALLSGRPDGTFLIRPS---TTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLH  180 (196)
Q Consensus       105 ~~~~Wy~-~isR~eAe~lL~~~~~G~FLVR~S---~~g~y~LSvr~~~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~h  180 (196)
                      -...||| .|+|++|+++|+.+++|+||||.|   ..|.|+|+++..+..+|++|...+.  |. .....|.||.|||.|
T Consensus         5 W~~gw~~G~isr~~a~~~L~~~~~GtFLvR~S~~s~~G~~tis~~~~~~~~~~~i~~~~p--~t-~~dl~~~sL~dlI~~   81 (141)
T d1bg1a3           5 WNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP--YT-KQQLNNMSFAEIIMG   81 (141)
T ss_dssp             HHSSCCCBCCCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCC--BC-GGGGTSSCHHHHTTS
T ss_pred             ecCCeEEEeCCHHHHHHHhhCCCCCeEEEEecCCccCCCEEEEEEecCcCCceEEeecCC--ee-cCccccCCHHHHHHh
Confidence            3457999 999999999999899999999988   5799999999999999999976432  33 334679999999999


Q ss_pred             HhhCCc
Q psy13388        181 YAANSL  186 (196)
Q Consensus       181 Y~~~~l  186 (196)
                      |+....
T Consensus        82 y~~~~~   87 (141)
T d1bg1a3          82 YKIMDA   87 (141)
T ss_dssp             CCCBCT
T ss_pred             hhhhcc
Confidence            975443

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=97.18  E-value=9.9e-05  Score=45.31  Aligned_cols=33  Identities=6%  Similarity=0.008  Sum_probs=25.4

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+.+.+   .|++||..+...|++|+||+|||.+
T Consensus        18 ~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1          18 RCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             CTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             CCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            45776664   4567987667789999999999974

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00027  Score=45.81  Aligned_cols=36  Identities=14%  Similarity=0.087  Sum_probs=26.6

Q ss_pred             CCCCCcceec----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++    |.+|+......|++|+||.|||.+.+
T Consensus        25 ~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~   64 (71)
T d1k9aa1          25 FCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   64 (71)
T ss_dssp             BCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEcc
Confidence            4567776643    33577666678999999999999865

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0013  Score=44.18  Aligned_cols=37  Identities=8%  Similarity=-0.065  Sum_probs=26.0

Q ss_pred             CCCCCcceecCC----ccccccccCCCcceeeccceEeccC
Q psy13388         33 GRLGPGYSIADP----GVASRGLSLAEQDFLTMNCALAVTG   69 (196)
Q Consensus        33 ~~~~~~~~~~dp----~~~~~~~~~g~~G~vP~nyv~~~~~   69 (196)
                      .+.|+.+.++..    .||......|+.|+||.|||+.+..
T Consensus        24 ~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~~~   64 (93)
T d1uffa_          24 FNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             BCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCS
T ss_pred             CcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEECCC
Confidence            455777776532    2444456789999999999988753

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.63  E-value=0.0004  Score=43.07  Aligned_cols=35  Identities=14%  Similarity=0.097  Sum_probs=24.9

Q ss_pred             CCCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         33 GRLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      .+.|+.+.++   +.+||.+....|++|+||+|||+++
T Consensus        19 ~~~Gd~i~vl~~~~~~~W~~~~~~g~~G~~P~~yv~~v   56 (57)
T d1opka1          19 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV   56 (57)
T ss_dssp             BCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEES
T ss_pred             CCCCCEEEEeEecCCCCEEEEEECCCEeEEchhheEEC
Confidence            4557777643   3345555566789999999999875

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.00052  Score=42.53  Aligned_cols=33  Identities=9%  Similarity=0.012  Sum_probs=24.9

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+.+.+   .|.+||......|++|+||.|||++
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_          21 KKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            45666664   4567887666678999999999975

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00083  Score=43.38  Aligned_cols=36  Identities=11%  Similarity=0.098  Sum_probs=26.6

Q ss_pred             CCCCCcceec-----CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA-----DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~-----dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++     +++||......|+.|+||.|||..+.
T Consensus        25 ~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~   65 (71)
T d1u5sa1          25 FEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             CCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECC
T ss_pred             ECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECC
Confidence            3557776643     24688766567899999999999865

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00079  Score=42.51  Aligned_cols=36  Identities=14%  Similarity=0.157  Sum_probs=26.4

Q ss_pred             CCCCCcceecC---Cccc-cccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD---PGVA-SRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d---p~~~-~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+++   .+|| .+....|++|+||.|||++.+
T Consensus        21 ~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1          21 FKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             BCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECc
Confidence            35577777543   3576 455678999999999999865

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.001  Score=48.73  Aligned_cols=69  Identities=23%  Similarity=0.334  Sum_probs=46.6

Q ss_pred             cccc-cCCHHHHHHHHhCCCCceEEEeeC--C-CCCeEEEeeeC----CcceEEEEEEecCCeEEecCCCcCCCHHHHHH
Q psy13388        108 TWLV-RMSRAQAEALLSGRPDGTFLIRPS--T-TGQYALSIVCS----GAPKHCLVYETERGFGFAEPFNIYPSLGALVL  179 (196)
Q Consensus       108 ~Wy~-~isR~eAe~lL~~~~~G~FLVR~S--~-~g~y~LSvr~~----~~vkH~rI~~~~~g~~~~~~~~~F~sL~dLI~  179 (196)
                      .|.. .|+|++|+++|+..+.|+||+|-|  . +|..+++....    ++.+++.|..-..      .+..=-+|.|.|.
T Consensus         8 G~I~GFIsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~~~~~~~~~~v~~lqP~t~------kdl~~~sLad~Ir   81 (142)
T d1bf5a3           8 GCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTK------KELSAVTFPDIIR   81 (142)
T ss_dssp             TCCCCCCCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECCCBCH------HHHHSSCHHHHHH
T ss_pred             CEEEEEecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEEecCCCCceeEEeeCCCch------hhhccCCHHHHHH
Confidence            3566 899999999999999999999999  3 59999888653    2333333332110      0111247777777


Q ss_pred             HHh
Q psy13388        180 HYA  182 (196)
Q Consensus       180 hY~  182 (196)
                      .|+
T Consensus        82 d~~   84 (142)
T d1bf5a3          82 NYK   84 (142)
T ss_dssp             TCC
T ss_pred             HHH
Confidence            764

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00073  Score=43.15  Aligned_cols=36  Identities=14%  Similarity=0.074  Sum_probs=26.6

Q ss_pred             CCCCCcceecC---CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD---PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d---p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+++   .+||......|++|+||.|||.+++
T Consensus        27 ~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_          27 LRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEECc
Confidence            45566666544   4688766678899999999998755

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0015  Score=44.76  Aligned_cols=37  Identities=11%  Similarity=-0.051  Sum_probs=26.9

Q ss_pred             CCCCCCcceecC---Cc-cccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIAD---PG-VASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~d---p~-~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++.|+.+.+.+   .. ||......|++|+||.|||+++.
T Consensus        41 sf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~   81 (96)
T d1wiea_          41 PLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             CCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             eEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECC
Confidence            456788877654   44 44444567899999999999875

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.00062  Score=41.96  Aligned_cols=34  Identities=21%  Similarity=0.327  Sum_probs=23.9

Q ss_pred             CCCCcceecC---Cccc-cccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIAD---PGVA-SRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~d---p~~~-~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+.+.+.+   .+|| .+....|++|+||.|||+++
T Consensus        20 ~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_          20 HKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             CTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            4466666432   3465 55667899999999999863

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00074  Score=42.77  Aligned_cols=36  Identities=14%  Similarity=0.168  Sum_probs=25.8

Q ss_pred             CCCCCcceecC--Cccc-cccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD--PGVA-SRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d--p~~~-~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++|+.+.+.+  .+|| .+....|++|+||.|||++.+
T Consensus        23 ~~~Gd~i~v~~~~~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1          23 FQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             BCTTCEEEEEECCTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCCCCEEEEEEECCCCEEEEEccCCCEEEEchHHeEECc
Confidence            34567666443  3455 566677999999999999865

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.00083  Score=42.12  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=23.3

Q ss_pred             CCCCcceecC--Cc-cccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIAD--PG-VASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~d--p~-~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+.+  .+ |+.+....|++|+||.|||++
T Consensus        26 ~~Gd~i~v~~~~~~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1          26 EKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             CTTCEEEEEECCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCEEEEeEEcCCCEEEEeccCCeEeEEcHHHEEe
Confidence            4466666433  23 445667789999999999986

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0023  Score=41.31  Aligned_cols=37  Identities=8%  Similarity=-0.031  Sum_probs=25.6

Q ss_pred             CCCCCCcceecC---CccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIAD---PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~d---p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..+.|+.+.+++   .+||.+....|++|+||.|||+.++
T Consensus        28 s~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yve~i~   67 (72)
T d1ugva_          28 SFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECC
T ss_pred             cCCCCCEEEEeeccCCCCEEEEEeCCCEEEEchHHEEECC
Confidence            345566665433   3455445567999999999999876

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.00066  Score=43.45  Aligned_cols=33  Identities=9%  Similarity=0.001  Sum_probs=24.9

Q ss_pred             CCCCcceecC--------CccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIAD--------PGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~d--------p~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+.+.+++        .+||......|++|+||+|||..
T Consensus        26 ~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~   66 (67)
T d2v1ra1          26 KKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI   66 (67)
T ss_dssp             CTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEE
T ss_pred             CCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEE
Confidence            4577766542        36887666789999999999975

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.26  E-value=0.00099  Score=41.44  Aligned_cols=35  Identities=11%  Similarity=-0.061  Sum_probs=25.3

Q ss_pred             CCCCcceecC--CccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIAD--PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~d--p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+.+.+.+  .+||......|++|+||.|||..+.
T Consensus        21 ~~Gd~i~v~~~~~~ww~~~~~~g~~G~~P~nyve~i~   57 (59)
T d1i07a_          21 MKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CTTCEEEECGGGCCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             cCCCEEEEEEEcCCcEEEEEcCCCEEEECHHHeEECC
Confidence            4466666443  3577666667999999999998865

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0014  Score=41.82  Aligned_cols=35  Identities=14%  Similarity=0.115  Sum_probs=26.3

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.|+.+.++   +.+||......|++|+||+|||....
T Consensus        22 ~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~   59 (67)
T d1gl5a_          22 ERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             CTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESST
T ss_pred             CCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEec
Confidence            456666643   44688766777899999999998755

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.01  Score=40.16  Aligned_cols=36  Identities=14%  Similarity=0.023  Sum_probs=26.5

Q ss_pred             CCCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..+.|+...+   .|.+||... ..|+.|+||.|||+.++
T Consensus        52 sf~~Gd~i~Vl~~~~~gWw~g~-~~g~~G~~P~nyVe~~~   90 (98)
T d1udla_          52 SFSKGQLINVMNKDDPDWWQGE-INGVTGLFPSNYVKMTT   90 (98)
T ss_dssp             CCCTTCEEEECBCCSSSEEBCB-SSSCBCCEETTSEEECC
T ss_pred             eEcCCCEEEEeEecCCCeEEEE-ECCeEEEEchHHEEECC
Confidence            4566777664   345787643 57899999999998866

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0021  Score=42.31  Aligned_cols=35  Identities=6%  Similarity=-0.051  Sum_probs=25.8

Q ss_pred             CCCCCcceecC-------CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIAD-------PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~d-------p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+++       .+||... ..|++|+||.|||...+
T Consensus        32 ~~~Gd~i~vl~~~~~~~~~~W~~g~-~~g~~G~vP~~yv~~~~   73 (79)
T d1uhca_          32 VSANQKLKILEFKDVTGNTEWWLAE-VNGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             BCTTCEEEEEESCCTTSCTTEEEEE-SSSCEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEEeecCCCCCCEEEEE-ECCCEEEEehhhEEECC
Confidence            45677777542       4577543 57899999999999866

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0012  Score=40.67  Aligned_cols=32  Identities=9%  Similarity=0.075  Sum_probs=20.7

Q ss_pred             CCCCcceecC----CccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSIAD----PGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~~d----p~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      ++|+.+.+.+    .+|+ .+...|++|+||.|||+.
T Consensus        20 ~~Gd~v~v~~~~~~~~W~-~~~~~g~~G~vP~nyvev   55 (56)
T d1gria1          20 KRGDILKVLNEECDQNWY-KAELNGKDGFIPKNYIEM   55 (56)
T ss_dssp             CTTCEEEC------CCEE-EEESSSCEEEEEGGGEEC
T ss_pred             CCCCEEEEEeccCCCCeE-EEEECCcEEEEehhhEEE
Confidence            3466655332    3355 455689999999999963

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.00  E-value=0.0006  Score=46.45  Aligned_cols=36  Identities=11%  Similarity=0.071  Sum_probs=25.9

Q ss_pred             CCCCCCccee---cCCcccccc-----ccCCCcceeeccceEec
Q psy13388         32 GGRLGPGYSI---ADPGVASRG-----LSLAEQDFLTMNCALAV   67 (196)
Q Consensus        32 ~~~~~~~~~~---~dp~~~~~~-----~~~g~~G~vP~nyv~~~   67 (196)
                      .+++|+.+.+   .|++||...     ...|+.|+||+|||.+.
T Consensus        24 sf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~   67 (96)
T d1kjwa1          24 SFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (96)
T ss_dssp             CBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             eEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceeee
Confidence            3466777764   457788543     35689999999999763

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.001  Score=41.79  Aligned_cols=33  Identities=6%  Similarity=-0.087  Sum_probs=23.6

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+   .|.+||... ..|++|+||.|||++.
T Consensus        25 ~~Gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~yVe~~   60 (62)
T d1k4us_          25 QEGDIILVLSKVNEEWLEGE-SKGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CSSCEEEEEEESSSSCEEEE-CSSCEEEECGGGCCCS
T ss_pred             CCCCEEEEeEEcCCCEEEEE-ECCcEEEEchHHeEEC
Confidence            44666553   456787643 4799999999999763

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.002  Score=40.08  Aligned_cols=32  Identities=19%  Similarity=0.068  Sum_probs=22.4

Q ss_pred             CCCcce---ecCCcccc-ccccCCCcceeeccceEe
Q psy13388         35 LGPGYS---IADPGVAS-RGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        35 ~~~~~~---~~dp~~~~-~~~~~g~~G~vP~nyv~~   66 (196)
                      .|+.+.   ..|.+||. +...+|++|+||.|||+.
T Consensus        24 ~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve~   59 (60)
T d1arka_          24 DGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA   59 (60)
T ss_dssp             TTCEECCSEECSSSEEEEECTTTCCEEEEETTTCEE
T ss_pred             CCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEEE
Confidence            344443   44566764 455689999999999975

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0015  Score=41.92  Aligned_cols=35  Identities=9%  Similarity=-0.085  Sum_probs=25.0

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++|+.+.++  |.+||... ..|++|+||.|||..++
T Consensus        27 ~~~Gd~v~vl~~~~~Ww~~~-~~g~~G~vP~~yv~~~~   63 (69)
T d1uhfa_          27 FTEGEEILVTQKDGEWWTGS-IGDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             BCTTCEEEECEEETTEEEEC-STTCCEEECGGGCEECC
T ss_pred             CCCCCEEEEEEecCCEEEEE-ECCcEEEEchhhEEECC
Confidence            3456665543  35687644 46999999999999876

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0056  Score=41.29  Aligned_cols=35  Identities=9%  Similarity=-0.105  Sum_probs=25.0

Q ss_pred             CCCCCcceec---C----CccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---D----PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---d----p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   |    .+||... ..|++|+||.|||....
T Consensus        36 ~~~Gd~v~vl~~~d~~~~~~Ww~~~-~~g~~G~~P~~yv~~~~   77 (92)
T d1ug1a_          36 LLEGDLVGVIKKKDPMGSQNRWLID-NGVTKGFVYSSFLKPYN   77 (92)
T ss_dssp             CCTTCEEEEEESCCTTSCSSEEEEE-CSSSEEEEEGGGEEECC
T ss_pred             EecccEEEEEEcccccccCCceEEE-ecccEEEEEhhhceecC
Confidence            3457777654   3    3577643 47899999999999865

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.82  E-value=0.0023  Score=39.47  Aligned_cols=34  Identities=6%  Similarity=-0.237  Sum_probs=23.8

Q ss_pred             CCCCccee---cCCcccc-ccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVAS-RGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~-~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+.+.+   .|.+||. +...+|++|+||+|||+.+
T Consensus        20 ~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_          20 VENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEEc
Confidence            34555553   4456774 4567899999999999764

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.81  E-value=0.0023  Score=41.39  Aligned_cols=36  Identities=8%  Similarity=0.005  Sum_probs=25.0

Q ss_pred             CCCCCcceec---CCccccc-c----ccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPGVASR-G----LSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~~~~-~----~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...++   +.+||.. .    ...|++|+||.|||+++.
T Consensus        26 ~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~   69 (74)
T d1wfwa_          26 VSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFS   69 (74)
T ss_dssp             BCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCC
T ss_pred             CccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEECC
Confidence            3557776644   5678743 2    234789999999998866

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.74  E-value=0.0011  Score=42.71  Aligned_cols=34  Identities=9%  Similarity=-0.029  Sum_probs=24.3

Q ss_pred             CCCCCcceec----CCcccccc-ccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA----DPGVASRG-LSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~----dp~~~~~~-~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...++    |.+||.-. ..+|++|++|+|||++
T Consensus        29 f~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVeP   67 (69)
T d1gcqc_          29 LNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHP   67 (69)
T ss_dssp             BCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             EcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEE
Confidence            4557776643    24577643 4679999999999986

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.59  E-value=0.0019  Score=39.81  Aligned_cols=33  Identities=12%  Similarity=0.105  Sum_probs=22.9

Q ss_pred             CCCCcce---ecCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYS---IADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~---~~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      ..|+...   ..|++||... ..|+.|++|.|||+++
T Consensus        21 ~~Gd~i~v~~~~~~~Ww~g~-~~g~~G~~P~~yve~i   56 (57)
T d1utia_          21 RSGEVVEVLDSSNPSWWTGR-LHNKLGLFPANYVAPM   56 (57)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEeEEcCCCEEEEE-ECCcEEEEEHHHEEEc
Confidence            3455544   3456787643 5699999999999863

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=95.49  E-value=0.0032  Score=38.92  Aligned_cols=33  Identities=12%  Similarity=0.108  Sum_probs=23.7

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+.+.+   .|++||... ..|+.|+||.|||++.
T Consensus        22 ~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yvep~   57 (58)
T d1sema_          22 KRGDVITLINKDDPNWWEGQ-LNNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CTTCEEEEEECSSSSEEEEE-ETTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEeEEcCCCEEEEE-ECCeEEEEEhhhEEEC
Confidence            44666554   456787643 4689999999999864

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.44  E-value=0.003  Score=38.60  Aligned_cols=32  Identities=9%  Similarity=0.040  Sum_probs=22.8

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .+.+||... ..|++|+||.|||++
T Consensus        20 ~~Gd~v~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~   54 (55)
T d1u06a1          20 KKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK   54 (55)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEE
T ss_pred             CCCCEEEEeEEcCCCEEEEE-ECCeEEEEeHHHEEE
Confidence            44666553   345687643 578999999999986

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.015  Score=37.45  Aligned_cols=35  Identities=0%  Similarity=-0.167  Sum_probs=24.5

Q ss_pred             CCCCCcceec--CCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA--DPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~--dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.++  +.+||.-. ..|++|+||.|||..+.
T Consensus        29 ~~~Gd~i~vl~~~~~ww~g~-~~g~~G~fP~~yve~i~   65 (74)
T d1j3ta_          29 FSKHDIITVLEQQENWWFGE-VHGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             BCTTCEEEEEEECSSEEEEE-STTCCCEEEGGGEEECC
T ss_pred             CCCCCEEEEEEccCCeEEEE-ECCcEEEEchhhEEECC
Confidence            3456666543  35677533 46999999999999865

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.31  E-value=0.006  Score=39.22  Aligned_cols=36  Identities=3%  Similarity=-0.030  Sum_probs=25.5

Q ss_pred             CCCCCcceec---CCc-ccc-ccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSIA---DPG-VAS-RGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~~---dp~-~~~-~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ++.|+.+.++   +.+ ||. +....|++|+||.|||..++
T Consensus        27 f~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~   67 (72)
T d1spka_          27 FAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             BCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             EcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECC
Confidence            4557777754   233 654 33567899999999999876

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.0034  Score=38.45  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=23.4

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      ++|+.+.+.   |.+|+.. ...|+.|+||.|||+++
T Consensus        21 ~~Gd~i~v~~~~~~~W~~g-~~~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_          21 RRGDFIHVMDNSDPNWWKG-ACHGQTGMFPRNYVTPV   56 (56)
T ss_dssp             CTTCEEEEEECCSSSEEEE-EETTEEEEEEGGGEEEC
T ss_pred             CCCCEEEEEEecCCCEEEE-EECCeEEEEEHhHEEEC
Confidence            456666643   4567753 34699999999999863

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.20  E-value=0.0024  Score=39.48  Aligned_cols=34  Identities=18%  Similarity=0.064  Sum_probs=23.1

Q ss_pred             CCCCCccee---cCC-ccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSI---ADP-GVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~---~dp-~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+.+.+   .|+ +||..+...|++|+||.|||+.
T Consensus        20 ~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~yve~   57 (58)
T d1oota_          20 FRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL   57 (58)
T ss_dssp             BCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEE
T ss_pred             CCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHHHEEE
Confidence            345777664   333 3444455679999999999975

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.19  E-value=0.0039  Score=38.47  Aligned_cols=32  Identities=9%  Similarity=0.085  Sum_probs=22.7

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEe
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      +.|+...+   .|.+|+... ..|++|+||.|||+.
T Consensus        22 ~~Gd~i~v~~~~~~~W~~g~-~~g~~G~~P~~yV~~   56 (58)
T d1uj0a_          22 KHGELITVLDDSDANWWQGE-NHRGTGLFPSNFVTT   56 (58)
T ss_dssp             CTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEES
T ss_pred             CCCCEEEEeEEeCCCEEEEE-ECCeEEEEehHhEee
Confidence            44666664   345687644 469999999999974

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.0025  Score=39.33  Aligned_cols=33  Identities=9%  Similarity=0.065  Sum_probs=22.7

Q ss_pred             CCCCcceec---CCccccccccCCCcceeeccceEec
Q psy13388         34 RLGPGYSIA---DPGVASRGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        34 ~~~~~~~~~---dp~~~~~~~~~g~~G~vP~nyv~~~   67 (196)
                      +.|+...+.   |.+||. +...|++|+||+|||+++
T Consensus        22 ~~Gd~i~vl~~~~~~Ww~-~~~~g~~G~~P~~yve~l   57 (58)
T d1ng2a1          22 STGDVVEVVEKSESGWWF-CQMKAKRGWIPASFLEPL   57 (58)
T ss_dssp             CTTCEEEEEECCTTSCCE-EEECCCCCCCCGGGCCCS
T ss_pred             CCCCEEEEEEecCCCeEE-EEECCCCcEEcHhHEEEC
Confidence            346665533   445765 345689999999999764

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.14  E-value=0.0047  Score=37.62  Aligned_cols=33  Identities=9%  Similarity=-0.019  Sum_probs=22.4

Q ss_pred             CCCCCcceec---CCcc-c-cccccCCCcceeeccceE
Q psy13388         33 GRLGPGYSIA---DPGV-A-SRGLSLAEQDFLTMNCAL   65 (196)
Q Consensus        33 ~~~~~~~~~~---dp~~-~-~~~~~~g~~G~vP~nyv~   65 (196)
                      .+.|+.+.++   |.+| + .+....|++|+||.|||.
T Consensus        18 ~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1          18 ITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             BCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             ECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            3457766643   3343 3 345678999999999985

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.013  Score=38.07  Aligned_cols=36  Identities=8%  Similarity=-0.062  Sum_probs=25.7

Q ss_pred             CCCCCccee---cCCccccc----cccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASR----GLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~----~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+.+.+   .|.+||.-    +...+++|+||.|||..+.
T Consensus        26 ~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~   68 (80)
T d1ue9a_          26 LAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG   68 (80)
T ss_dssp             CCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECC
T ss_pred             EcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEECC
Confidence            345666664   45678742    3567889999999999866

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.68  E-value=0.007  Score=37.91  Aligned_cols=33  Identities=12%  Similarity=-0.076  Sum_probs=22.8

Q ss_pred             CCCCCcceec---C---CccccccccCCCcceeeccceEe
Q psy13388         33 GRLGPGYSIA---D---PGVASRGLSLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~~---d---p~~~~~~~~~g~~G~vP~nyv~~   66 (196)
                      .+.|+...+.   |   ++||.. ...|++|+||.|||+.
T Consensus        23 ~~~Gd~i~vl~~~~~~~~gW~~g-~~~g~~G~~P~~yv~~   61 (63)
T d1ycsb2          23 MKEGDCMTIIHREDEDEIEWWWA-RLNDKEGYVPRNLLGL   61 (63)
T ss_dssp             BCSSCEEEECCCCTTSCSSEEEE-EETTEEEEEEGGGEEC
T ss_pred             CCCCCEEEEEEecCCCCCCEEEE-EECCeEEEEchHHhEe
Confidence            3457766653   2   247753 3479999999999975

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.0094  Score=38.62  Aligned_cols=36  Identities=8%  Similarity=-0.032  Sum_probs=25.8

Q ss_pred             CCCCCCcceecC---CccccccccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIAD---PGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~d---p~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..+.|+...+++   .+||.. ...|++|+||.|||..++
T Consensus        28 s~~~Gd~i~v~~~~~~~W~~g-~~~g~~G~~P~~yv~~i~   66 (76)
T d1ujya_          28 SVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CBCSSCCEEESSCCSSSCEEE-EETTEEEEECTTTSEECC
T ss_pred             cCCCCCEEEEeEEcCCCEEEE-EECCcEEEEchHHEEECC
Confidence            345677776544   457764 456899999999998865

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.0091  Score=38.21  Aligned_cols=35  Identities=9%  Similarity=-0.087  Sum_probs=24.8

Q ss_pred             CCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         34 RLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        34 ~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      ..|+.+.+   .|.+||......++.|+||.|||..+.
T Consensus        26 ~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~   63 (71)
T d2hspa_          26 IKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             CTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSCS
T ss_pred             CCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEcC
Confidence            34555443   456788766667777899999998865

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.01  Score=41.35  Aligned_cols=35  Identities=6%  Similarity=-0.175  Sum_probs=25.2

Q ss_pred             CCCCCccee---cCCccccccccCCCcceeeccceEecc
Q psy13388         33 GRLGPGYSI---ADPGVASRGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~~~~   68 (196)
                      .+.|+...+   .|.+||.-. ..|++|+||.|||....
T Consensus        33 ~~~Gd~i~Vl~~~~~gWw~g~-~~g~~G~~P~~yv~~~~   70 (118)
T d1ng2a2          33 LLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQKSG   70 (118)
T ss_dssp             BCTTCEEEEEECCTTSEEEEE-ETTEEEEEEGGGEEETT
T ss_pred             CCCCCEEEEeEecCCCeEEEE-ECCeEEEEehhhEEECC
Confidence            345676664   345687633 47999999999998865

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.01  Score=35.81  Aligned_cols=30  Identities=7%  Similarity=-0.104  Sum_probs=21.4

Q ss_pred             CCCccee---cCCccccccccCCCcceeeccceE
Q psy13388         35 LGPGYSI---ADPGVASRGLSLAEQDFLTMNCAL   65 (196)
Q Consensus        35 ~~~~~~~---~dp~~~~~~~~~g~~G~vP~nyv~   65 (196)
                      .|+...+   .|.+||... ..|++|++|.|||+
T Consensus        21 ~Gd~v~vl~~~~~gWw~g~-~~g~~G~~P~~yve   53 (53)
T d1wlpb1          21 EGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ   53 (53)
T ss_dssp             TTCEEEEEECCTTSSEEEE-SSSCEEEECSTTEE
T ss_pred             CCCEEEEEeecCCceEEEE-ECCcEeEecHHhCC
Confidence            4555553   456787643 66899999999985

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.0078  Score=39.89  Aligned_cols=26  Identities=8%  Similarity=-0.040  Sum_probs=20.4

Q ss_pred             CCcccc-ccccCCCcceeeccceEecc
Q psy13388         43 DPGVAS-RGLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        43 dp~~~~-~~~~~g~~G~vP~nyv~~~~   68 (196)
                      +.+||. +...+|+.|++|.|||..+.
T Consensus        50 ~~GW~~G~~~~~g~~G~FP~nYVe~i~   76 (83)
T d1phta_          50 EIGWLNGYNETTGERGDFPGTYVEYIG   76 (83)
T ss_dssp             HHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CCCeEEEEECCCCcEeeEehhhEEEcC
Confidence            356886 34568999999999998865

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.38  E-value=0.013  Score=38.64  Aligned_cols=36  Identities=11%  Similarity=-0.073  Sum_probs=24.1

Q ss_pred             CCCCCCcceecC--------Ccccc---------ccccCCCcceeeccceEec
Q psy13388         32 GGRLGPGYSIAD--------PGVAS---------RGLSLAEQDFLTMNCALAV   67 (196)
Q Consensus        32 ~~~~~~~~~~~d--------p~~~~---------~~~~~g~~G~vP~nyv~~~   67 (196)
                      ..+.|+...+++        .+||.         ....+|+.|++|.|||..+
T Consensus        30 s~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          30 QLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             CBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             cCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            345677777543        34764         1234578999999999875

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.17  E-value=0.0085  Score=40.88  Aligned_cols=34  Identities=12%  Similarity=-0.073  Sum_probs=24.5

Q ss_pred             CCCCCccee---cCCccccccc--cCCCcceeeccceEe
Q psy13388         33 GRLGPGYSI---ADPGVASRGL--SLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~--~~g~~G~vP~nyv~~   66 (196)
                      ++.|+.+.|   .|++||...+  ..|+.||||++++.+
T Consensus        47 F~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~~~~e   85 (96)
T d1t0ha_          47 FEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLE   85 (96)
T ss_dssp             BCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             CCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCcHHHH
Confidence            466777764   4678886543  357889999998755

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.53  E-value=0.032  Score=38.35  Aligned_cols=37  Identities=8%  Similarity=-0.127  Sum_probs=26.0

Q ss_pred             CCCCCCcceec------CCccccc-------cccCCCcceeeccceEecc
Q psy13388         32 GGRLGPGYSIA------DPGVASR-------GLSLAEQDFLTMNCALAVT   68 (196)
Q Consensus        32 ~~~~~~~~~~~------dp~~~~~-------~~~~g~~G~vP~nyv~~~~   68 (196)
                      .++.|+...+.      +++||..       ....|+.|++|.|||.++.
T Consensus        39 ~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~   88 (106)
T d1i1ja_          39 TIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   88 (106)
T ss_dssp             CBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             cCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEcc
Confidence            45667777763      3568753       2345789999999999865

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.51  E-value=0.028  Score=40.66  Aligned_cols=34  Identities=15%  Similarity=-0.086  Sum_probs=23.9

Q ss_pred             CCCCCccee---cCCccccccc--cCCCcceeeccceEe
Q psy13388         33 GRLGPGYSI---ADPGVASRGL--SLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~--~~g~~G~vP~nyv~~   66 (196)
                      +++|+.+.+   .|++||..++  ..|+.|+||+||+.+
T Consensus        49 F~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~~~~e   87 (145)
T d1vyva1          49 FDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLE   87 (145)
T ss_dssp             BCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECHHHHH
T ss_pred             CcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCchhhh
Confidence            355776664   4678986443  468999999998655

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.83  E-value=0.078  Score=38.01  Aligned_cols=34  Identities=12%  Similarity=-0.118  Sum_probs=23.5

Q ss_pred             CCCCCccee---cCCccccccc--cCCCcceeeccceEe
Q psy13388         33 GRLGPGYSI---ADPGVASRGL--SLAEQDFLTMNCALA   66 (196)
Q Consensus        33 ~~~~~~~~~---~dp~~~~~~~--~~g~~G~vP~nyv~~   66 (196)
                      ++.|+.+.|   .|++||..+.  ..|+.||||++|+.+
T Consensus        49 F~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~~~lE   87 (136)
T d1vyua1          49 FEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLE   87 (136)
T ss_dssp             ECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             CCCCCEEEEEeccCCCcEEEEeccCCCceeccCchHHHh
Confidence            456777664   5678886542  456789999998544