Psyllid ID: psy13416

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGSYY
Secondary Structure (PSIPRED)
cccccccEEEEEcccccEEEcEEccccccccccccEEEEEccccEEccccccEEEcHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEcccEEEEEEcccccccEEEEccEEEEccccccccccccccEEcHHHHHcccccc
Coil and Loop (DISEMBL)
MCDEEVAALVVdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgsyy
Flexible Loop (DISEMBL)
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIvgrprhqgvmvgmgqkdsyvgdeaqskrgsyy
Low Complexity Region (SEG)
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGSYY
Disordered region (IsUnstruct)
*******ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG******************************
Disordered Region (DISOPRED)
****EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGSYY
Disordered Region (DISEMBL)
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG***********
Disordered Region (DISPRO)
****EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGSYY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
P04829	376	Actin, cytoplasmic A3 OS=	N/A	N/A	0.955	0.170	1.0	5e-33
P84185	376	Actin-5C OS=Anopheles gam	yes	N/A	0.955	0.170	1.0	5e-33
P84183	376	Actin, cytoplasmic A4 OS=	N/A	N/A	0.955	0.170	1.0	5e-33
P84184	376	Actin-A3b, cytoplasmic OS	N/A	N/A	0.955	0.170	1.0	5e-33
Q25010	376	Actin, cytoplasmic A3a OS	N/A	N/A	0.955	0.170	1.0	5e-33
P30163	376	Actin-2 OS=Onchocerca vol	N/A	N/A	0.955	0.170	1.0	5e-33
P10987	376	Actin-5C OS=Drosophila me	yes	N/A	0.955	0.170	1.0	5e-33
P02572	376	Actin-42A OS=Drosophila m	yes	N/A	0.955	0.170	1.0	5e-33
P30162	376	Actin-1 OS=Onchocerca vol	N/A	N/A	0.955	0.170	1.0	5e-33
O18500	376	Actin-2 OS=Saccoglossus k	yes	N/A	0.955	0.170	1.0	6e-33

>sp|P04829|ACT3_BOMMO Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.
Bombyx mori (taxid: 7091)

>sp|P84185|ACT5C_ANOGA Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Anopheles gambiae (taxid: 7165)

>sp|P84183|ACT4_BOMMO Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Bombyx mori (taxid: 7091)

>sp|P84184|ACT3B_HELAM Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Helicoverpa armigera (taxid: 29058)

>sp|Q25010|ACT3A_HELAM Actin, cytoplasmic A3a OS=Helicoverpa armigera GN=actA3a PE=2 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Helicoverpa armigera (taxid: 29058)

>sp|P30163|ACT2_ONCVO Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Onchocerca volvulus (taxid: 6282)

>sp|P10987|ACT1_DROME Actin-5C OS=Drosophila melanogaster GN=Act5C PE=1 SV=4

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Drosophila melanogaster (taxid: 7227)

>sp|P02572|ACT2_DROME Actin-42A OS=Drosophila melanogaster GN=Act42A PE=1 SV=3

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.

Drosophila melanogaster (taxid: 7227)

>sp|P30162|ACT1_ONCVO Actin-1 OS=Onchocerca volvulus GN=act-1a PE=3 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Onchocerca volvulus (taxid: 6282)

>sp|O18500|ACT2_SACKO Actin-2 OS=Saccoglossus kowalevskii PE=2 SV=1

 Score =  139 bits (349), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Saccoglossus kowalevskii (taxid: 10224)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
5853356	376	actin [Lymantria dispar]	0.955	0.170	1.0	1e-31
341899346	361	hypothetical protein CAEBREN_32825 [Caen	0.955	0.177	0.984	2e-31
187281837	376	actin, cytoplasmic A3 [Bombyx mori] gi|3	0.955	0.170	1.0	2e-31
156750	376	actin [Drosophila melanogaster]	0.955	0.170	1.0	2e-31
3182902	376	RecName: Full=Actin, cytoplasmic A3a; Fl	0.955	0.170	1.0	2e-31
383853395	376	PREDICTED: actin-5C-like [Megachile rotu	0.955	0.170	1.0	2e-31
339249175	376	actin-5C [Trichinella spiralis] gi|31697	0.955	0.170	1.0	2e-31
254679590	376	actin 1 [Ditylenchus destructor]	0.955	0.170	1.0	2e-31
268619130	376	actin-4 [Bursaphelenchus xylophilus] gi|	0.955	0.170	1.0	2e-31
195119912	376	GI19595 [Drosophila mojavensis] gi|19540	0.955	0.170	1.0	2e-31

>gi|5853356|gb|AAD54427.1|AF182715_1 actin [Lymantria dispar]

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Lymantria dispar

Species: Lymantria dispar

Genus: Lymantria

Family: Lymantriidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|341899346|gb|EGT55281.1| hypothetical protein CAEBREN_32825 [Caenorhabditis brenneri]

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Caenorhabditis brenneri

Species: Caenorhabditis brenneri

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|187281837|ref|NP_001119726.1| actin, cytoplasmic A3 [Bombyx mori] gi|3123181|sp|P04829.3|ACT3_BOMMO RecName: Full=Actin, cytoplasmic A3; Flags: Precursor gi|1737056|gb|AAC47446.1| Actin A3 [Bombyx mori] gi|379697528|dbj|BAL70288.1| cytoplsmic actin A3 [Bombyx mori]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156750|gb|AAA28314.1| actin [Drosophila melanogaster]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|3182902|sp|Q25010.1|ACT3A_HELAM RecName: Full=Actin, cytoplasmic A3a; Flags: Precursor gi|19526211|gb|AAL89657.1|AF286059_1 cytoplasmic actin A3b [Helicoverpa zea] gi|19526213|gb|AAL89658.1|AF286060_1 cytoplasmic actin A3a1 [Helicoverpa zea] gi|1296532|emb|CAA66218.1| Cytoplasmin actin A3a [Helicoverpa armigera] gi|28070937|emb|CAD58315.1| non-muscle actin [Manduca sexta] gi|154091302|gb|ABS57458.1| actin 1 [Heliconius erato] gi|307695433|gb|ADN84932.1| actin [Helicoverpa armigera] gi|308512669|gb|ADO32988.1| cytoplasmic actin A3 [Biston betularia] gi|327082402|gb|AEA29698.1| actin [Trichoplusia ni] gi|359843282|gb|AEV89776.1| actin [Schistocerca gregaria] gi|389608207|dbj|BAM17715.1| actin, cytoplasmic A3 [Papilio xuthus] gi|389610811|dbj|BAM19016.1| actin, cytoplasmic A3 [Papilio polytes] gi|443419072|gb|AGC84408.1| actin [Locusta migratoria]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Helicoverpa zea

Species: Helicoverpa zea

Genus: Helicoverpa

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853395|ref|XP_003702208.1| PREDICTED: actin-5C-like [Megachile rotundata]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|339249175|ref|XP_003373575.1| actin-5C [Trichinella spiralis] gi|316970244|gb|EFV54220.1| actin-5C [Trichinella spiralis]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Trichinella spiralis

Species: Trichinella spiralis

Genus: Trichinella

Family: Trichinellidae

Order: Trichocephalida

Class: Enoplea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|254679590|gb|ACT78498.1| actin 1 [Ditylenchus destructor]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Ditylenchus destructor

Species: Ditylenchus destructor

Genus: Ditylenchus

Family: Anguinidae

Order: Tylenchida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|268619130|gb|ACZ13341.1| actin-4 [Bursaphelenchus xylophilus] gi|270309008|dbj|BAI52957.1| actin [Bursaphelenchus xylophilus]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Bursaphelenchus xylophilus

Species: Bursaphelenchus xylophilus

Genus: Bursaphelenchus

Family: Aphelenchoididae

Order: Tylenchida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|195119912|ref|XP_002004473.1| GI19595 [Drosophila mojavensis] gi|195401469|ref|XP_002059335.1| GJ18395 [Drosophila virilis] gi|193909541|gb|EDW08408.1| GI19595 [Drosophila mojavensis] gi|194142341|gb|EDW58747.1| GJ18395 [Drosophila virilis]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
FB|FBgn0000043	376	Act42A "Actin 42A" [Drosophila	0.955	0.170	1.0	1.4e-30
FB|FBgn0000042	376	Act5C "Actin 5C" [Drosophila m	0.955	0.170	1.0	1.4e-30
FB|FBgn0000044	376	Act57B "Actin 57B" [Drosophila	0.955	0.170	0.984	3e-30
FB|FBgn0000046	376	Act87E "Actin 87E" [Drosophila	0.955	0.170	0.984	3e-30
WB|WBGene00000063	376	act-1 [Caenorhabditis elegans	0.955	0.170	0.984	3e-30
WB|WBGene00000065	376	act-3 [Caenorhabditis elegans	0.955	0.170	0.984	3e-30
WB|WBGene00000066	376	act-4 [Caenorhabditis elegans	0.955	0.170	0.984	3e-30
ZFIN|ZDB-GENE-051030-60	376	zgc:123289 "zgc:123289" [Danio	0.955	0.170	0.984	3e-30
WB|WBGene00000064	376	act-2 [Caenorhabditis elegans	0.955	0.170	0.968	6.2e-30
UNIPROTKB|P10984	376	act-2 "Actin-2" [Caenorhabditi	0.955	0.170	0.968	6.2e-30

FB|FBgn0000043 Act42A "Actin 42A" [Drosophila melanogaster (taxid:7227)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005884 "actin filament" evidence=ISS;NAS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

FB|FBgn0000042 Act5C "Actin 5C" [Drosophila melanogaster (taxid:7227)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005884 "actin filament" evidence=ISS;NAS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0007291 "sperm individualization" evidence=IEP

GO:0005524 "ATP binding" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0031011 "Ino80 complex" evidence=IDA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0032507 "maintenance of protein location in cell" evidence=IMP

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0016319 "mushroom body development" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

FB|FBgn0000044 Act57B "Actin 57B" [Drosophila melanogaster (taxid:7227)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005884 "actin filament" evidence=ISS;NAS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0007507 "heart development" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0051533 "positive regulation of NFAT protein import into nucleus" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0051297 "centrosome organization" evidence=IMP

FB|FBgn0000046 Act87E "Actin 87E" [Drosophila melanogaster (taxid:7227)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005884 "actin filament" evidence=ISS;NAS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

WB|WBGene00000063 act-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005524 "ATP binding" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=IGI;IMP

GO:0005856 "cytoskeleton" evidence=ISS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

WB|WBGene00000065 act-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005524 "ATP binding" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0030029 "actin filament-based process" evidence=IGI

GO:0009790 "embryo development" evidence=IGI

GO:0000281 "cytokinesis after mitosis" evidence=IGI

GO:0005865 "striated muscle thin filament" evidence=IDA

WB|WBGene00000066 act-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005524 "ATP binding" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=ISS

GO:0005856 "cytoskeleton" evidence=ISS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005865 "striated muscle thin filament" evidence=IDA

ZFIN|ZDB-GENE-051030-60 zgc:123289 "zgc:123289" [Danio rerio (taxid:7955)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

WB|WBGene00000064 act-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 62/64 (96%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0000003 "reproduction" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0009790 "embryo development" evidence=IGI;IMP

GO:0000281 "cytokinesis after mitosis" evidence=IGI

GO:0007126 "meiosis" evidence=IMP

GO:0030029 "actin filament-based process" evidence=IMP

GO:0007108 "cytokinesis, initiation of separation" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0005938 "cell cortex" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005884 "actin filament" evidence=IDA

GO:0016887 "ATPase activity" evidence=ISS

UNIPROTKB|P10984 act-2 "Actin-2" [Caenorhabditis elegans (taxid:6239)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 62/64 (96%), Positives = 64/64 (100%)

Query:     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct:     1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query:    61 SKRG 64
             SKRG
Sbjct:    61 SKRG 64

GO:0006200 "ATP catabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P84183	ACT4_BOMMO	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
O16808	ACT_MAYDE	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q26065	ACT_PLAMG	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P92179	ACTC_BIOGL	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P17304	ACTM_APLCA	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P84185	ACT5C_ANOGA	No assigned EC number	1.0	0.9552	0.1702	yes	N/A
P84184	ACT3B_HELAM	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
P53463	ACTM_HELER	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P12431	ACTM_STRPU	No assigned EC number	0.9531	0.9552	0.1711	yes	N/A
P53464	ACTM_HELTB	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q964E1	ACTC_BIOOB	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q964E0	ACTC_BIOTE	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q964E3	ACTC_BIOAL	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q964E2	ACTC_BIOPF	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P18601	ACT2_ARTSX	No assigned EC number	0.9687	0.9552	0.1702	N/A	N/A
P18600	ACT1_ARTSX	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P18603	ACT4_ARTSX	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P53501	ACT3_DROME	No assigned EC number	0.9843	0.9552	0.1702	yes	N/A
P30162	ACT1_ONCVO	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
P30163	ACT2_ONCVO	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
P41340	ACT3_LIMPO	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
O18500	ACT2_SACKO	No assigned EC number	1.0	0.9552	0.1702	yes	N/A
Q25010	ACT3A_HELAM	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
P12717	ACTM_PISOC	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P12716	ACTC_PISOC	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P90689	ACT_BRUMA	No assigned EC number	0.9687	0.9552	0.1702	N/A	N/A
P53505	ACT5_XENLA	No assigned EC number	0.9531	0.9552	0.1702	N/A	N/A
P02572	ACT2_DROME	No assigned EC number	1.0	0.9552	0.1702	yes	N/A
P17126	ACT_HYDVU	No assigned EC number	0.9687	0.9552	0.1702	N/A	N/A
P45885	ACT2_BACDO	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P49871	ACT_MANSE	No assigned EC number	0.9687	0.9552	0.1702	N/A	N/A
P45887	ACT5_BACDO	No assigned EC number	0.9531	0.9552	0.1702	N/A	N/A
P45886	ACT3_BACDO	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P41339	ACTA_LIMPO	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
O18499	ACT1_SACKO	No assigned EC number	0.9843	0.9552	0.1702	yes	N/A
P92182	ACT1_LUMTE	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
Q6P378	ACTG_XENTR	No assigned EC number	0.9838	0.9253	0.1653	yes	N/A
P53471	ACT2_SCHMA	No assigned EC number	0.9687	0.9552	0.1702	N/A	N/A
P49128	ACT1_AEDAE	No assigned EC number	0.9531	0.9552	0.1702	N/A	N/A
P53478	ACT5_CHICK	No assigned EC number	0.9687	0.9552	0.1702	yes	N/A
Q03341	ACT2_ECHGR	No assigned EC number	0.9375	0.9552	0.1702	N/A	N/A
Q964D9	ACTC_HELTI	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A
P04829	ACT3_BOMMO	No assigned EC number	1.0	0.9552	0.1702	N/A	N/A
P02574	ACT4_DROME	No assigned EC number	0.9531	0.9552	0.1702	yes	N/A
P10986	ACT4_CAEEL	No assigned EC number	0.9843	0.9552	0.1702	yes	N/A
P10987	ACT1_DROME	No assigned EC number	1.0	0.9552	0.1702	yes	N/A
P10984	ACT2_CAEEL	No assigned EC number	0.9687	0.9552	0.1702	yes	N/A
P10981	ACT5_DROME	No assigned EC number	0.9843	0.9552	0.1702	yes	N/A
P10983	ACT1_CAEEL	No assigned EC number	0.9843	0.9552	0.1702	yes	N/A
P53461	ACTC_HALRO	No assigned EC number	0.9843	0.9552	0.1702	N/A	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	67
PTZ00281	376	PTZ00281, PTZ00281, actin; Provisional	6e-39
PTZ00004	378	PTZ00004, PTZ00004, actin-2; Provisional	1e-30
smart00268	373	smart00268, ACTIN, Actin	3e-26
pfam00022	367	pfam00022, Actin, Actin	1e-25
COG5277	444	COG5277, COG5277, Actin and related proteins [Cyto	4e-23
PTZ00466	380	PTZ00466, PTZ00466, actin-like protein; Provisiona	4e-18
PTZ00452	375	PTZ00452, PTZ00452, actin; Provisional	1e-17
PTZ00280	414	PTZ00280, PTZ00280, Actin-related protein 3; Provi	2e-08

>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional

 Score =  130 bits (329), Expect = 6e-39
 Identities = 58/64 (90%), Positives = 60/64 (93%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          M  E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1  MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQ 60

Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

Length = 376

>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional

 Score =  109 bits (273), Expect = 1e-30
 Identities = 49/64 (76%), Positives = 53/64 (82%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          M  EE  A VVDNGSGM KAGFAGDDAPR VFPSIVGRP++ G+MVGM +KD YVGDEAQ
Sbjct: 1  MSVEETNAAVVDNGSGMVKAGFAGDDAPRCVFPSIVGRPKNPGIMVGMEEKDCYVGDEAQ 60

Query: 61 SKRG 64
           KRG
Sbjct: 61 DKRG 64

Length = 378

>gnl|CDD|214592 smart00268, ACTIN, Actin

 Score = 97.7 bits (244), Expect = 3e-26
 Identities = 39/59 (66%), Positives = 45/59 (76%), Gaps = 1/59 (1%)

Query: 6  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          V A+V+DNGSG  KAGFAG+D P+ VFPSIVGRP+    MVG   KD +VGDEAQ KRG
Sbjct: 1  VPAIVIDNGSGTIKAGFAGEDFPQVVFPSIVGRPKDGKGMVG-DAKDIFVGDEAQEKRG 58

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily. Length = 373

>gnl|CDD|200935 pfam00022, Actin, Actin

 Score = 95.8 bits (239), Expect = 1e-25
 Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 5/61 (8%)

Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          +EV+ALV+DNGSG  KAGFAG+DAPRAV PS+VGRPR +GVMV       YVGDEA SKR
Sbjct: 1  DEVSALVIDNGSGTTKAGFAGEDAPRAVIPSVVGRPRGRGVMV-----KYYVGDEALSKR 55

Query: 64 G 64
           
Sbjct: 56 P 56

Length = 367

>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton]

 Score = 89.8 bits (223), Expect = 4e-23
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEA 59
          M  + V  +V+DNGSG  KAGFAG+D P  VFPSIVGR R    VM    +KD+YVG+EA
Sbjct: 1  MTGDNVPTIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEA 60

Query: 60 QSKRGS 65
          Q+ R +
Sbjct: 61 QNDRDN 66

Length = 444

>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional

 Score = 75.4 bits (185), Expect = 4e-18
 Identities = 28/56 (50%), Positives = 42/56 (75%)

Query: 9  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          +++DNG+G  KAGFAG+D P  VFPS VGRP+++ VM G  + + +VG++A+  RG
Sbjct: 15 IIIDNGTGYIKAGFAGEDVPNLVFPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYRG 70

Length = 380

>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional

 Score = 74.4 bits (182), Expect = 1e-17
 Identities = 32/57 (56%), Positives = 41/57 (71%)

Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          A+V+DNGSG CK G AGDDAP + FP+IVGR +    +     K+ YVG+EAQ+KRG
Sbjct: 7  AVVIDNGSGYCKIGIAGDDAPTSCFPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKRG 63

Length = 375

>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional

 Score = 48.2 bits (115), Expect = 2e-08
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQSKRG 64
           +V+DNG+G  K G+AG+  P  + P+++     Q       G    D Y+GDEA +   
Sbjct: 6  VVVIDNGTGYTKMGYAGNTEPTYIIPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAASK 65

Query: 65 SY 66
          SY
Sbjct: 66 SY 67

Length = 414

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	67
3eks_A	375	Crystal Structure Of Monomeric Actin Bound To Cytoc		2e-33
1d4x_A	375	Crystal Structure Of Caenorhabditis Elegans Mg-Atp		7e-33
2hf3_A	374	Crystal Structure Of Monomeric Actin In The Adp Bou		2e-32
3u4l_A	375	Cryocooled Bovine Profilin:actin Crystal Structure		2e-31
3byh_A	374	Model Of Actin-Fimbrin Abd2 Complex Length = 374		2e-31
2oan_A	375	Structure Of Oxidized Beta-Actin Length = 375		2e-31
2btf_A	375	The Structure Of Crystalline Profilin-Beta-Actin Le		2e-31
1yvn_A	375	The Yeast Actin Val 159 Asn Mutant Complex With Hum		2e-31
1yag_A	375	Structure Of The Yeast Actin-human Gelsolin Segment		1e-30
3w3d_A	374	Crystal Structure Of Smooth Muscle G Actin Dnase I		4e-30
3b63_L	365	Actin Filament Model In The Extended Form Of Acroms		5e-30
4efh_A	375	Acanthamoeba Actin Complex With Spir Domain D Lengt		8e-30
1ijj_A	377	The X-Ray Crystal Structure Of The Complex Between		8e-30
1eqy_A	377	Complex Between Rabbit Muscle Alpha-Actin: Human Ge		9e-30
1dej_A	375	Crystal Structure Of A DictyosteliumTETRAHYMENA CHI		1e-29
1nlv_A	375	Crystal Structure Of Dictyostelium Discoideum Actin		1e-29
1c0g_A	375	Crystal Structure Of 1:1 Complex Between Gelsolin S		1e-29
3chw_A	375	Complex Of Dictyostelium Discoideum Actin With Prof		1e-29
3b63_C	365	Actin Filament Model In The Extended Form Of Acroms		1e-29
3b63_A	365	Actin Filament Model In The Extended Form Of Acroms		1e-29
3a5m_C	375	Crystal Structure Of A Dictyostelium P109i Mg2+-Act		2e-29
3a5l_C	375	Crystal Structure Of A Dictyostelium P109a Mg2+-Act		2e-29
4b1v_A	376	Structure Of The Phactr1 Rpel-N Domain Bound To G-A		4e-29
3ci5_A	375	Complex Of Phosphorylated Dictyostelium Discoideum		1e-28
1kxp_A	375	Crystal Structure Of Human Vitamin D-binding Protei		1e-28
3g37_O	376	Cryo-Em Structure Of Actin Filament In The Presence		2e-28
1qz5_A	375	Structure Of Rabbit Actin In Complex With Kabiramid		2e-28
3m6g_A	371	Crystal Structure Of Actin In Complex With Lobophor		2e-28
2w49_D	372	Isometrically Contracting Insect Asynchronous Fligh		2e-28
1atn_A	373	Atomic Structure Of The Actin:dnase I Complex Lengt		2e-28
3b63_F	357	Actin Filament Model In The Extended Form Of Acroms		1e-27
2gwj_A	371	Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form		1e-27
1t44_A	370	Structural Basis Of Actin Sequestration By Thymosin		1e-27
3b63_D	357	Actin Filament Model In The Extended Form Of Acroms		1e-27
3b63_E	365	Actin Filament Model In The Extended Form Of Acroms		1e-27
3b63_B	364	Actin Filament Model In The Extended Form Of Acroms		2e-27
1lcu_A	371	Polylysine Induces An Antiparallel Actin Dimer That		8e-26
1c0f_A	368	Crystal Structure Of Dictyostelium Caatp-Actin In C		2e-23
3mn5_A	359	Structures Of Actin-Bound Wh2 Domains Of Spire And		6e-15
2p9k_B	394	Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta		1e-07
1k8k_B	394	Crystal Structure Of Arp23 COMPLEX Length = 394		2e-07
3dwl_A	427	Crystal Structure Of Fission Yeast Arp2/3 Complex L		1e-04
1k8k_A	418	Crystal Structure Of Arp23 COMPLEX Length = 418		1e-04

>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375

Iteration: 1
 Score =  137 bits (345), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/63 (100%), Positives = 63/63 (100%)
Query: 2  CDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
          CDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1  CDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 62 KRG 64
          KRG
Sbjct: 61 KRG 63

>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375

Iteration: 1
 Score =  135 bits (339), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 62/63 (98%), Positives = 63/63 (100%)
Query: 2  CDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
          CD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1  CDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 62 KRG 64
          KRG
Sbjct: 61 KRG 63

>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374

Iteration: 1
 Score =  134 bits (336), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/62 (100%), Positives = 62/62 (100%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 1  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 60
Query: 63 RG 64
          RG
Sbjct: 61 RG 62

>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375

Iteration: 1
 Score =  130 bits (327), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374

Iteration: 1
 Score =  130 bits (327), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 1  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 60
Query: 63 RG 64
          RG
Sbjct: 61 RG 62

>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375

Iteration: 1
 Score =  130 bits (327), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375

Iteration: 1
 Score =  130 bits (327), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  130 bits (326), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/62 (95%), Positives = 61/62 (98%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D EVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG+MVGMGQKDSYVGDEAQSK
Sbjct: 2  DSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375

Iteration: 1
 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 59/62 (95%), Positives = 61/62 (98%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          D EVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG+MVGMGQKDSYVGDEAQSK
Sbjct: 2  DSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374

Iteration: 1
 Score =  126 bits (316), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          +EE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 1  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 60
Query: 63 RG 64
          RG
Sbjct: 61 RG 62

>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  125 bits (315), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/58 (100%), Positives = 58/58 (100%)
Query: 7  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 1  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 58

>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375

Iteration: 1
 Score =  125 bits (313), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          +EV ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  DEVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377

Iteration: 1
 Score =  125 bits (313), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/65 (90%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
Query: 1  MCDE-EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
          MCDE E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1  MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 60 QSKRG 64
          QSKRG
Sbjct: 61 QSKRG 65

>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377

Iteration: 1
 Score =  124 bits (312), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/65 (90%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
Query: 1  MCDE-EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
          MCDE E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1  MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 60 QSKRG 64
          QSKRG
Sbjct: 61 QSKRG 65

>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/58 (96%), Positives = 58/58 (100%)
Query: 7  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG+MVGMGQKDSYVGDEAQSKRG
Sbjct: 1  AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 58

>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/58 (96%), Positives = 58/58 (100%)
Query: 7  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG+MVGMGQKDSYVGDEAQSKRG
Sbjct: 1  AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 58

>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  124 bits (310), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  124 bits (310), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376

Iteration: 1
 Score =  122 bits (307), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 59/64 (92%), Gaps = 1/64 (1%)
Query: 2  CDE-EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
          CDE E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1  CDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 61 SKRG 64
          SKRG
Sbjct: 61 SKRG 64

>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375

Iteration: 1
 Score =  121 bits (303), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/61 (91%), Positives = 58/61 (95%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDS VGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQSKR 62
Query: 64 G 64
          G
Sbjct: 63 G 63

>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375

Iteration: 1
 Score =  120 bits (302), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376

Iteration: 1
 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 63 RG 64
          RG
Sbjct: 63 RG 64

>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375

Iteration: 1
 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371

Iteration: 1
 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372

Iteration: 1
 Score =  120 bits (301), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 63 RG 64
          RG
Sbjct: 62 RG 63

>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373

Iteration: 1
 Score =  120 bits (301), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 63 RG 64
          RG
Sbjct: 63 RG 64

>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  118 bits (295), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 3  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 59

>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371

Iteration: 1
 Score =  117 bits (294), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 3  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 59

>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370

Iteration: 1
 Score =  117 bits (294), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 2  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 58

>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  117 bits (294), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 1  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 57

>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  117 bits (293), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 2  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 58

>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364

Iteration: 1
 Score =  117 bits (293), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 55/57 (96%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 2  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 58

>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371

Iteration: 1
 Score =  111 bits (278), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/57 (91%), Positives = 53/57 (92%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQ DSYVGDEAQSKRG
Sbjct: 3  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRG 59

>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368

Iteration: 1
 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/61 (81%), Positives = 52/61 (85%), Gaps = 7/61 (11%)
Query: 4  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
          E+V ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G       KDSYVGDEAQSKR
Sbjct: 3  EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTG-------KDSYVGDEAQSKR 55
Query: 64 G 64
          G
Sbjct: 56 G 56

>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 16/62 (25%)
Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGR                VGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR----------------VGDEAQSK 45
Query: 63 RG 64
          RG
Sbjct: 46 RG 47

>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 9  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 63
          +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R
Sbjct: 9  VVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEASELR 65

>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 9  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 63
          +V DNG+G  K G+AG + P  +FP++VGRP  R    +  +  KD  VGDEA   R
Sbjct: 9  VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELR 65

>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 9  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYVGDEA----QSK 62
          +++DNG+G  K G+AG+DAP  VFP+++   R  G   G  +  K SY+  +      SK
Sbjct: 8  IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 63 RGS 65
          R +
Sbjct: 67 RAT 69

>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
          A VVD G+G  K G+AG+  P+ + PS         VG    + VM G+   D ++GDEA
Sbjct: 7  ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEA 66
Query: 60 QSK 62
            K
Sbjct: 67 IEK 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	67
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	5e-36
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	6e-33
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	4e-32
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	2e-30
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	3e-27

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375

 Score =  122 bits (309), Expect = 5e-36
 Identities = 55/64 (85%), Positives = 58/64 (90%)

Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
          ++E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2  EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 63 RGSY 66
          RG  
Sbjct: 62 RGIL 65

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394

 Score =  115 bits (289), Expect = 6e-33
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR--HQGVMVGMGQKDSYVGDE 58
          M  +    +V DNG+G  K G+AG + P  +FP++VGRP       +  +  KD  VGDE
Sbjct: 1  MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE 60

Query: 59 AQSKRGSY 66
          A   R   
Sbjct: 61 ASELRSML 68

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418

 Score =  113 bits (284), Expect = 4e-32
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSY 54
             + A VVD G+G  K G+AG+  P+ + PS +             + VM G+   D +
Sbjct: 2  AGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFF 61

Query: 55 VGDEAQSKRG 64
          +GDEA  K  
Sbjct: 62 IGDEAIEKPT 71

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498

 Score =  109 bits (274), Expect = 2e-30
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 1  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
             +EV+A+V+D GS     G++G D P+++ PS+ G+          G K  +      
Sbjct: 18 YGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTA-----DEGNKKIFSEQSIG 72

Query: 61 SKRGSY 66
            R  Y
Sbjct: 73 IPRKDY 78

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427

 Score =  100 bits (250), Expect = 3e-27
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 22/87 (25%)

Query: 3  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR---------------------- 40
                +++DNG+G  K G+AG+DAP  VFP+++                          
Sbjct: 2  ASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSG 61

Query: 41 HQGVMVGMGQKDSYVGDEAQSKRGSYY 67
          H          D ++G++A  K  + Y
Sbjct: 62 HLSSKRATEDLDFFIGNDALKKASAGY 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	99.74
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	99.58
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	99.56
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	99.52
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	99.45
4fo0_A	593	Actin-related protein 8; chromatin remodeling, nuc	99.36
1jce_A	344	ROD shape-determining protein MREB; MBL, actin, HS	98.22
4am6_A	655	Actin-like protein ARP8; nuclear protein, chromati	97.85
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	97.27
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	96.84
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	96.45
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	94.69
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	93.13
4gni_A	409	Putative heat shock protein; HSP70-type ATPase, AT	93.05
4apw_A	329	ALP12; actin-like protein; 19.70A {Clostridium tet	92.56
3js6_A	355	Uncharacterized PARM protein; partition, segregati	91.38
4b9q_A	605	Chaperone protein DNAK; HET: ATP; 2.40A {Escherich	90.65
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	89.51
2fsj_A	346	Hypothetical protein TA0583; actin homologs, archa	89.26
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	85.9
3h1q_A	272	Ethanolamine utilization protein EUTJ; ethanolamin	83.19

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.74  E-value=6.3e-19  Score=121.59  Aligned_cols=61  Identities=30%  Similarity=0.573  Sum_probs=46.5

Q ss_pred             CCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccC----------------------cceecCCCcceEEchhhhh
Q psy13416          4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ----------------------GVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~----------------------~~~~~~~~~~~~vG~ea~~   61 (67)
                      .+.+||||||||+++||||||++.|+++|||+||+++++                      ..+.+..++++|||+||+.
T Consensus         3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~   82 (427)
T 3dwl_A            3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALK   82 (427)
T ss_dssp             CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHH
T ss_pred             CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhh
Confidence            357899999999999999999999999999999999864                      1122445678999999987


Q ss_pred             hcc
Q psy13416         62 KRG   64 (67)
Q Consensus        62 ~~~   64 (67)
                      .++
T Consensus        83 ~~~   85 (427)
T 3dwl_A           83 KAS   85 (427)
T ss_dssp             THH
T ss_pred             Ccc
Confidence            653

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...

Probab=99.58  E-value=1.3e-15  Score=102.33  Aligned_cols=62  Identities=89%  Similarity=1.377  Sum_probs=47.8

Q ss_pred             CCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhhcc
Q psy13416          3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG   64 (67)
Q Consensus         3 ~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~~~   64 (67)
                      .|++++||||+||+++|+||+|++.|++++||++|+++....+.+...++++||++|...++
T Consensus         2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~   63 (375)
T 2fxu_A            2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG   63 (375)
T ss_dssp             --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTT
T ss_pred             CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCc
Confidence            36778999999999999999999999999999999988765444444568999999987654

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}

Probab=99.56  E-value=3e-15  Score=105.35  Aligned_cols=56  Identities=27%  Similarity=0.523  Sum_probs=47.1

Q ss_pred             CCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchh-hhhhcc
Q psy13416          3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE-AQSKRG   64 (67)
Q Consensus         3 ~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~e-a~~~~~   64 (67)
                      +++.++|||||||+++||||||++.|+++|||+||+++...      .++.+||++ +...++
T Consensus        20 gde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~   76 (498)
T 3qb0_A           20 GDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRK   76 (498)
T ss_dssp             CCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCT
T ss_pred             CCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcC
Confidence            47889999999999999999999999999999999987542      457899997 444443

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*

Probab=99.52  E-value=9.2e-16  Score=104.04  Aligned_cols=64  Identities=41%  Similarity=0.709  Sum_probs=0.0

Q ss_pred             CCCCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcce-e-cCCCcceEEchhhhhhcc
Q psy13416          1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-V-GMGQKDSYVGDEAQSKRG   64 (67)
Q Consensus         1 m~~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~-~-~~~~~~~~vG~ea~~~~~   64 (67)
                      |...+.++||||+||+++|+||+|++.|+++|||++|+++....+ . +...++++||++|...++
T Consensus         1 ~~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~   66 (394)
T 1k8k_B            1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS   66 (394)
T ss_dssp             ------------------------------------------------------------------
T ss_pred             CCCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCC
Confidence            444567899999999999999999999999999999998875322 1 223467899999877654

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A

Probab=99.45  E-value=6.3e-14  Score=94.95  Aligned_cols=60  Identities=37%  Similarity=0.619  Sum_probs=46.3

Q ss_pred             CCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcc--------eecCCCcceEEchhhhhhc
Q psy13416          4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV--------MVGMGQKDSYVGDEAQSKR   63 (67)
Q Consensus         4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~--------~~~~~~~~~~vG~ea~~~~   63 (67)
                      .++++||||+||+++|+||+|++.|+++|||+||+++....        +.+...++++||++|...+
T Consensus         3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~   70 (418)
T 1k8k_A            3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP   70 (418)
T ss_dssp             CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT
T ss_pred             CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC
Confidence            34678999999999999999999999999999999876421        1222234699999997653

>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}

Probab=99.36  E-value=8.6e-13  Score=92.50  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=31.2

Q ss_pred             cceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416          6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH   41 (67)
Q Consensus         6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~   41 (67)
                      ++.||||+||+++|+|||||+.|+. ||++||+++.
T Consensus        15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~   49 (593)
T 4fo0_A           15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHK   49 (593)
T ss_dssp             GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECS
T ss_pred             CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECC
Confidence            4579999999999999999999985 6999998753

>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A

Probab=98.22  E-value=1.3e-06  Score=57.48  Aligned_cols=49  Identities=18%  Similarity=0.111  Sum_probs=39.3

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhhc
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR   63 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~~   63 (67)
                      .+|+||+||.++|++++++. |...+||+|+..+..       .+.+++|++|....
T Consensus         4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~   52 (344)
T 1jce_A            4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMI   52 (344)
T ss_dssp             CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTT
T ss_pred             ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhc
Confidence            57999999999999999876 778899999986541       13468999987643

>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*

Probab=97.85  E-value=1.2e-05  Score=58.55  Aligned_cols=37  Identities=38%  Similarity=0.665  Sum_probs=32.9

Q ss_pred             CCcceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416          4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH   41 (67)
Q Consensus         4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~   41 (67)
                      +....|||..||.++|+|+|.|..|. .+|++|++++.
T Consensus        38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~   74 (655)
T 4am6_A           38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKK   74 (655)
T ss_dssp             CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGG
T ss_pred             CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccc
Confidence            45778999999999999999999999 57999998643

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}

Probab=97.27  E-value=0.00025  Score=49.32  Aligned_cols=46  Identities=17%  Similarity=0.271  Sum_probs=36.4

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK   62 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~   62 (67)
                      .+|.||.||.+++++++.+..|..+        +||+|+..          ..+.++|++|...
T Consensus         3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~   56 (509)
T 2v7y_A            3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQ   56 (509)
T ss_dssp             CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTT
T ss_pred             CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHh
Confidence            4788999999999999988888876        77777762          1356899998654

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...

Probab=96.45  E-value=0.0032  Score=41.87  Aligned_cols=54  Identities=15%  Similarity=0.278  Sum_probs=36.8

Q ss_pred             cceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      +..|.||.||.+++++|..+..|. ++++.-|+.+..... .....+.++|++|..
T Consensus        23 ~~viGID~GTt~s~va~~~~g~~~-ii~~~~g~~~~PS~v-~~~~~~~~vG~~A~~   76 (404)
T 3i33_A           23 MPAIGIDLGTTYSCVGVFQHGKVE-IIANDQGNRTTPSYV-AFTDTERLIGDAAKN   76 (404)
T ss_dssp             CCCEEEEECSSEEEEEEEETTEEE-ECCCTTSCSSEECCE-EECSSCEEETHHHHH
T ss_pred             CCEEEEEcCCccEEEEEEECCeeE-EEECCCCCcccceEE-EECCCCEEecHHHHH
Confidence            457889999999999999877776 456666654332211 112236789999865

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1

Probab=94.69  E-value=0.03  Score=36.93  Aligned_cols=46  Identities=22%  Similarity=0.394  Sum_probs=30.4

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.||.++.+.+..+..|..+        +||+|...+         ..+.++|++|..
T Consensus         3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~---------~~~~~~G~~A~~   56 (383)
T 1dkg_D            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ---------DGETLVGQPAKR   56 (383)
T ss_dssp             CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECT---------TSCEEESHHHHT
T ss_pred             cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEEC---------CCCEEECHHHHH
Confidence            3577999999999999865556543        455555432         124567777654

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}

Probab=93.13  E-value=0.1  Score=37.08  Aligned_cols=46  Identities=22%  Similarity=0.394  Sum_probs=30.2

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.|+.++.+++..+..|..+        .||+|+..+         ..+.++|++|..
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~---------~~~~~vG~~A~~   56 (605)
T 2kho_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ---------DGETLVGQPAKR   56 (605)
T ss_dssp             -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECT---------TSCEEESHHHHT
T ss_pred             CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEEC---------CCcEEECHHHHH
Confidence            3678999999999999866666543        344444321         224567877754

>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}

Probab=93.05  E-value=0.094  Score=34.90  Aligned_cols=53  Identities=17%  Similarity=0.271  Sum_probs=30.3

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.|+.++++.+..+..|. ++++.-|..+.... ........++|++|..
T Consensus        14 ~vvGIDlGTt~s~va~~~~g~~~-ii~~~~g~~~~PS~-v~~~~~~~~~G~~A~~   66 (409)
T 4gni_A           14 VVIGITFGNSNSSIAHTVDDKAE-VIANEDGDRQIPTI-LSYVDGDEYYGQQAKN   66 (409)
T ss_dssp             CEEEEEECSSEEEEEEEETTEEE-EECCTTSCSSEECE-EEEETTEEEEHHHHHH
T ss_pred             cEEEEEcCCCeEEEEEEeCCceE-EEECCCCCccCceE-EEECCCcEEEcHHHHH
Confidence            46779999999999998443343 44444343322111 1111235678888754

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}

Probab=92.56  E-value=0.16  Score=33.38  Aligned_cols=54  Identities=15%  Similarity=0.177  Sum_probs=35.6

Q ss_pred             ceEEEECCCCceEEEEe--C---CCCCeeeeeccccccccCc-------ceecCCCcceEEchhhh
Q psy13416          7 AALVVDNGSGMCKAGFA--G---DDAPRAVFPSIVGRPRHQG-------VMVGMGQKDSYVGDEAQ   60 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~a--g---~~~P~~~~ps~vg~~~~~~-------~~~~~~~~~~~vG~ea~   60 (67)
                      ..|-||.|-+++|+-..  +   ++.-+..|||.++..+...       .....+.+.++||+++.
T Consensus         8 ~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~   73 (329)
T 4apw_A            8 YVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGV   73 (329)
T ss_dssp             EEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSS
T ss_pred             eEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccc
Confidence            35669999999999763  2   2224467999998765321       11223446789998764

>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}

Probab=91.38  E-value=0.54  Score=31.32  Aligned_cols=53  Identities=23%  Similarity=0.448  Sum_probs=34.9

Q ss_pred             cceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcc---------------eecCCCcc-eEEchhhhh
Q psy13416          6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV---------------MVGMGQKD-SYVGDEAQS   61 (67)
Q Consensus         6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~---------------~~~~~~~~-~~vG~ea~~   61 (67)
                      +..|-||+|=+++|+ ..+. . ...|||+++.......               .......+ +|||+.|..
T Consensus         4 ~~iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~   72 (355)
T 3js6_A            4 VYVMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDK   72 (355)
T ss_dssp             EEEEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHH
T ss_pred             cEEEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhh
Confidence            446779999999995 5544 2 5789999986543210               01123356 899998854

>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D

Probab=90.65  E-value=0.4  Score=34.04  Aligned_cols=54  Identities=17%  Similarity=0.247  Sum_probs=31.7

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.|+.++.+.+.....|. ++++.-|.........-......++|++|..
T Consensus         3 ~viGIDlGTT~S~Va~~~~g~~~-ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~   56 (605)
T 4b9q_A            3 KIIGIDLGTTNSCVAIMDGTTPR-VLENAEGDRTTPSIIAYTQDGCTLVGQPAKR   56 (605)
T ss_dssp             CEEEEECCSSEEEEEEEETTEEE-ECCCTTSCSSEECCEEECTTSCEEESHHHHH
T ss_pred             cEEEEEcCCCcEEEEEEECCEEE-EEECCCCCcccceEEEEeCCCcEEecHHHHH
Confidence            46779999999999998665665 3444433332211111111235678888754

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*

Probab=89.51  E-value=0.71  Score=32.39  Aligned_cols=53  Identities=17%  Similarity=0.278  Sum_probs=31.8

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.|+.++.+++.....|. ++++--|....... ........++|++|..
T Consensus         5 ~~iGIDlGTt~s~va~~~~g~~~-ii~n~~g~~~~PS~-V~~~~~~~~vG~~A~~   57 (554)
T 1yuw_A            5 PAVGIDLGTTYSCVGVFQHGKVE-IIANDQGNRTTPSY-VAFTDTERLIGDAAKN   57 (554)
T ss_dssp             CCEEEEECSSEEEEEEECSSSEE-ECCCTTSCSEEECC-EEECSSCEEETHHHHT
T ss_pred             CEEEEEeCcccEEEEEEECCEEE-EEECCCCCeecceE-EEEcCCcEEEcHHHHH
Confidence            46889999999999999766555 34444333221111 1111225678888754

>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*

Probab=89.26  E-value=0.17  Score=33.40  Aligned_cols=33  Identities=27%  Similarity=0.236  Sum_probs=24.8

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH   41 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~   41 (67)
                      ..|-||.|++++|+=. ++ .-...|||+|+....
T Consensus        22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~   54 (346)
T 2fsj_A           22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTET   54 (346)
T ss_dssp             EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECC
T ss_pred             EEEEEecCCcceeEEe-cC-CCEEEecceeeeccc
Confidence            3578999999999864 32 235679999987654

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*

Probab=85.90  E-value=1.1  Score=32.30  Aligned_cols=53  Identities=21%  Similarity=0.368  Sum_probs=31.5

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ..|-||.|+.++.+++.....|. ++++--|....... ........++|++|..
T Consensus         3 ~~iGIDlGTtns~va~~~~g~~~-ii~n~~g~r~tPS~-Vaf~~~~~~vG~~A~~   55 (675)
T 3d2f_A            3 TPFGLDLGNNNSVLAVARNRGID-IVVNEVSNRSTPSV-VGFGPKNRYLGETGKN   55 (675)
T ss_dssp             CCEEEECCSSEEEEEEEETTEEE-EECCTTSCSSEECC-EEECSSSEEETHHHHH
T ss_pred             cEEEEEcCCCcEEEEEEECCeeE-EEECCCCCcccceE-EEECCCcEEecHHHHH
Confidence            37889999999999997655555 34444443221111 1111224688988854

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}

Probab=83.19  E-value=1.5  Score=27.28  Aligned_cols=20  Identities=15%  Similarity=0.064  Sum_probs=16.4

Q ss_pred             ceEEEECCCCceEEEEeCCC
Q psy13416          7 AALVVDNGSGMCKAGFAGDD   26 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~   26 (67)
                      ..++||+||.++|+....++
T Consensus        29 ~~~gIDiGS~s~k~vi~~~~   48 (272)
T 3h1q_A           29 YKVGVDLGTADIVLVVTDQE   48 (272)
T ss_dssp             CEEEEECCSSEEEEEEECTT
T ss_pred             EEEEEEcccceEEEEEECCC
Confidence            36789999999999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	67
d2fxua1	140	c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId:	3e-29
d1k8ka1	158	c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {	3e-24

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 98.6 bits (245), Expect = 3e-29
 Identities = 54/59 (91%), Positives = 55/59 (93%)

Query: 8  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGSY 66
          ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG  
Sbjct: 1  ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 59

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 86.3 bits (213), Expect = 3e-24
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 5  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVG 56
           + A VVD G+G  K G+AG+  P+ + PS +             + VM G+   D ++G
Sbjct: 2  RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIG 61

Query: 57 DEAQSKRG 64
          DEA  K  
Sbjct: 62 DEAIEKPT 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	67
d2fxua1	140	Actin {Cow (Bos taurus) [TaxId: 9913]}	99.74
d1k8ka1	158	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	99.72
d2fsja2	164	Hypothetical protein Ta0583 {Archaeon Thermoplasma	94.88
d1dkgd1	183	Heat shock protein 70kDa, ATPase fragment {Escheri	94.84
d1bupa1	185	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	92.15
d1u6za2	124	Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5	85.33
d1t6ca1	126	Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6	83.59

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=7.4e-19  Score=103.80  Aligned_cols=58  Identities=93%  Similarity=1.407  Sum_probs=45.7

Q ss_pred             eEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhhccC
Q psy13416          8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGS   65 (67)
Q Consensus         8 ~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~~~~   65 (67)
                      +||||+||+++|+||||++.|++++||++|+++.+....+....+.++|+++...+..
T Consensus         1 avViD~Gs~~~k~G~age~~P~~~~ps~~g~~~~~~~~~~~~~~~~~igd~~~~~~~~   58 (140)
T d2fxua1           1 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI   58 (140)
T ss_dssp             CEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTS
T ss_pred             CEEEECCCCeEEEeeCCCCCcceEeccceeeecccccccCccccceeeChhHhhcccc
Confidence            5999999999999999999999999999999987765555556678999998876543

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.72  E-value=2.7e-18  Score=103.68  Aligned_cols=57  Identities=39%  Similarity=0.659  Sum_probs=45.4

Q ss_pred             cceEEEECCCCceEEEEeCCCCCeeeeeccccccccCc--------ceecCCCcceEEchhhhhh
Q psy13416          6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--------VMVGMGQKDSYVGDEAQSK   62 (67)
Q Consensus         6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~--------~~~~~~~~~~~vG~ea~~~   62 (67)
                      .+|||||+||+++||||||++.|+++|||+||.++...        .+.+...+++|+|+|++.+
T Consensus         3 ~PavViD~GS~~~KaG~age~~P~~i~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~ig~e~~~~   67 (158)
T d1k8ka1           3 LPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK   67 (158)
T ss_dssp             SCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSC
T ss_pred             CCcEEEECCCCeEEEEECCCCCCCEEeccceeecccccccCchhcccccCCCccceecChhhhhC
Confidence            46899999999999999999999999999999875432        2233445679999999753

>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.88  E-value=0.019  Score=32.68  Aligned_cols=51  Identities=25%  Similarity=0.221  Sum_probs=32.7

Q ss_pred             eEEEECCCCceEEEEeCCCCCeeeeeccccccccCcc---------eecCCCcceEEchhhh
Q psy13416          8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV---------MVGMGQKDSYVGDEAQ   60 (67)
Q Consensus         8 ~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~---------~~~~~~~~~~vG~ea~   60 (67)
                      .|-||.|-+++|+-..  +.-...|||.++.......         ....+.+.+++|+.|.
T Consensus         3 iigiD~G~g~tK~~~~--~~~~~~fPS~v~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~A~   62 (164)
T d2fsja2           3 VVGLDVGYGDTKVIGV--DGKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYAS   62 (164)
T ss_dssp             EEEEEECSSEEEEECG--GGCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCC
T ss_pred             EEEEEcCCcceEEEec--CCCEEEEeeeceeccccccccCCCceeEEEEeCCeEEEEccchh
Confidence            4669999999997432  2234679999987543221         1112345689998763

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=94.84  E-value=0.014  Score=33.83  Aligned_cols=54  Identities=17%  Similarity=0.295  Sum_probs=33.1

Q ss_pred             eEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhh
Q psy13416          8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK   62 (67)
Q Consensus         8 ~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~   62 (67)
                      .|-||.|+.++.+.+..+..|. ++++--+.........-......++|++|...
T Consensus         2 VvGIDfGTt~s~va~~~~~~~~-ii~n~~~~~~~ps~v~~~~~~~~~~G~~A~~~   55 (183)
T d1dkgd1           2 IIGIDLGTTNSCVAIMDGTTPR-VLENAEGDRTTPSIIAYTQDGETLVGQPAKRQ   55 (183)
T ss_dssp             CCEEECCSSEEEEEEEETTEEE-ECCCTTSCSEEECEEEECTTSCEEESHHHHTT
T ss_pred             EEEEEcChhcEEEEEEECCEEE-EEEcCCCcccccceeeecCCCCEEccHHHHHh
Confidence            4679999999999998777665 34544444322111111223456788888653

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.15  E-value=0.092  Score=30.20  Aligned_cols=53  Identities=19%  Similarity=0.280  Sum_probs=31.3

Q ss_pred             ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416          7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS   61 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~   61 (67)
                      ++|-||.|+.++++.+..+..|. ++++--+..... +......++.++|+++..
T Consensus         2 ~vvGIDfGTt~s~va~~~~g~~~-ii~~~~~~r~~P-s~i~~~~~~~~vG~~a~~   54 (185)
T d1bupa1           2 PAVGIDLGSTYSCVGVFQHGKVE-IIANDQGNRTTP-SYVAFTDTERLIGDAAKN   54 (185)
T ss_dssp             CCEEEEECSSEEEEEEEETTEEE-ECCCTTSCSSEE-CCEEECSSCEEETHHHHT
T ss_pred             CEEEEEcChhcEEEEEEECCEEE-EEECCCCCccce-eEEEECCCcEEEeechHH
Confidence            46779999999999998766655 344433332211 111222345677877643

>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Escherichia coli [TaxId: 562]

Probab=85.33  E-value=0.17  Score=27.79  Aligned_cols=15  Identities=33%  Similarity=0.246  Sum_probs=12.4

Q ss_pred             EEEECCCCceEEEEe
Q psy13416          9 LVVDNGSGMCKAGFA   23 (67)
Q Consensus         9 vViD~GS~~~K~G~a   23 (67)
                      -|||.||+++|.=.+
T Consensus         3 A~IDiGSNsirl~I~   17 (124)
T d1u6za2           3 AAVDLGSNSFHMVIA   17 (124)
T ss_dssp             EEEEECSSCEEEEEE
T ss_pred             EEEEEccceEEEEEE
Confidence            368999999998665

>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Aquifex aeolicus [TaxId: 63363]

Probab=83.59  E-value=0.22  Score=27.43  Aligned_cols=18  Identities=22%  Similarity=0.159  Sum_probs=14.4

Q ss_pred             ceEEEECCCCceEEEEeC
Q psy13416          7 AALVVDNGSGMCKAGFAG   24 (67)
Q Consensus         7 ~~vViD~GS~~~K~G~ag   24 (67)
                      .--|||.||+++|.-.+.
T Consensus         4 riavIDIGSNsirl~I~~   21 (126)
T d1t6ca1           4 RVASIDIGSYSVRLTIAQ   21 (126)
T ss_dssp             EEEEEEECSSEEEEEEEE
T ss_pred             EEEEEEEccceEEEEEEE
Confidence            345789999999998764