Psyllid ID: psy13444

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mkdvfcyhcnltlpsstEALILHSKICsavnrpdnklkcyhckqvLSSSMDDLLfhsrkcavvwrpgksfnyvcclcdynvngrtdmkrhlqthtgekpykcshcgyetlrsHDLKRHMRIkhkivgks
Flexible Loop (DISEMBL)
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLqthtgekpykcshCGYETlrshdlkrhmrikhkivgks
Low Complexity Region (SEG)
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS
Disordered region (IsUnstruct)
***VFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDL**************
Disordered Region (DISOPRED)
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRH***********
Disordered Region (DISEMBL)
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS
Disordered Region (DISPRO)
**DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIK*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
Q13127	1097	RE1-silencing transcripti	yes	N/A	0.310	0.036	0.442	4e-09
Q8VIG1	1082	RE1-silencing transcripti	yes	N/A	0.310	0.036	0.442	5e-09
O54963	1069	RE1-silencing transcripti	yes	N/A	0.310	0.037	0.442	6e-09
A6QPM3	590	Putative histone-lysine N	yes	N/A	0.852	0.186	0.288	1e-08
Q9NQX0	595	Putative histone-lysine N	no	N/A	0.852	0.184	0.288	1e-08
Q5T619	568	Zinc finger protein 648 O	no	N/A	0.395	0.089	0.461	3e-08
A1YPR0	619	Zinc finger and BTB domai	no	N/A	0.379	0.079	0.42	3e-08
Q8VCZ7	619	Zinc finger and BTB domai	no	N/A	0.379	0.079	0.42	3e-08
A2APF3	636	Transcriptional repressor	no	N/A	0.604	0.122	0.369	6e-08
Q01611	794	Zinc finger Y-chromosomal	N/A	N/A	0.372	0.060	0.428	6e-08

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C LC Y+ + +T + RH++TH+GEKP+KC  C Y     H++ RH R  H
Sbjct: 304 YKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 355

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.
Homo sapiens (taxid: 9606)

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C LC Y+ + +T + RH++TH+GEKP+KC  C Y     H++ RH R  H
Sbjct: 299 YKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVH 350

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Mus musculus (taxid: 10090)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C LC Y+ + +T + RH++TH+GEKP+KC  C Y     H++ RH R  H
Sbjct: 303 YKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVH 354

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|A6QPM3|PRDM6_BOVIN Putative histone-lysine N-methyltransferase PRDM6 OS=Bos taurus GN=PRDM6 PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 15/125 (12%)

Query: 3   DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMD---DLLFHSRK 59
           D   + C     + T+ ++L   +C+    PD   +C HC Q  S   +    ++ HS  
Sbjct: 464 DWHLWKCGQCFKTFTQRILLQMHVCT--QNPDRPYQCGHCSQSFSQPSELRNHVVTHSSD 521

Query: 60  CAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHM 119
                RP K     C  C     G T +  H++THTGEKP+KC  C     ++  L RH 
Sbjct: 522 -----RPFK-----CGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQ 571

Query: 120 RIKHK 124
           R+ ++
Sbjct: 572 RMPNE 576

Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to some authors, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to others, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q9NQX0|PRDM6_HUMAN Putative histone-lysine N-methyltransferase PRDM6 OS=Homo sapiens GN=PRDM6 PE=2 SV=2

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 15/125 (12%)

Query: 3   DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMD---DLLFHSRK 59
           D   + C     + T+ ++L   +C+    PD   +C HC Q  S   +    ++ HS  
Sbjct: 469 DWHLWKCGQCFKTFTQRILLQMHVCT--QNPDRPYQCGHCSQSFSQPSELRNHVVTHSSD 526

Query: 60  CAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHM 119
                RP K     C  C     G T +  H++THTGEKP+KC  C     ++  L RH 
Sbjct: 527 -----RPFK-----CGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQ 576

Query: 120 RIKHK 124
           R+ ++
Sbjct: 577 RMPNE 581

Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to some authors, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to others, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q5T619|ZN648_HUMAN Zinc finger protein 648 OS=Homo sapiens GN=ZNF648 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 32/52 (61%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C  CD      +D ++H++THTGEKPY C  CG   +RS DL++H R  H
Sbjct: 307 YQCSFCDKAYTWSSDHRKHIRTHTGEKPYPCPDCGKAFVRSSDLRKHQRNMH 358

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A1YPR0|ZBT7C_HUMAN Zinc finger and BTB domain-containing protein 7C OS=Homo sapiens GN=ZBTB7C PE=2 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y+C +C+     +  +K H++ HTGE+PY C HC  + + ++DLK HMRI
Sbjct: 392 YMCTICEVRFTRQDKLKIHMRKHTGERPYLCIHCNAKFVHNYDLKNHMRI 441

May be a tumor suppressor gene.

Homo sapiens (taxid: 9606)

>sp|Q8VCZ7|ZBT7C_MOUSE Zinc finger and BTB domain-containing protein 7C OS=Mus musculus GN=Zbtb7c PE=2 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y+C +C+     +  +K H++ HTGE+PY C HC  + + ++DLK HMRI
Sbjct: 392 YMCSICEVRFTRQDKLKIHMRKHTGERPYLCIHCNAKFVHNYDLKNHMRI 441

May be a tumor suppressor gene.

Mus musculus (taxid: 10090)

>sp|A2APF3|CTCFL_MOUSE Transcriptional repressor CTCFL OS=Mus musculus GN=Ctcfl PE=1 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           KC  C     +S  +L+ H R      +P     + C LC Y     + MKRH+++HTGE
Sbjct: 314 KCRDCDMAFVTS-GELVRHRRYKHTYEKP-----FKCSLCKYASVEASKMKRHIRSHTGE 367

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           +P++C  C Y +  S+ LKRHMR 
Sbjct: 368 RPFQCCQCAYASRDSYKLKRHMRT 391

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites. Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Mus musculus (taxid: 10090)

>sp|Q01611|ZFY1_XENLA Zinc finger Y-chromosomal protein 1 OS=Xenopus laevis GN=zfy1 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%)

Query: 68  KSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           KSF ++C  C       +++K+H++THTGEKPY C +C Y +  S +LK H++ KH
Sbjct: 533 KSFPHICVECGKGFRHPSELKKHMRTHTGEKPYLCQYCDYRSADSSNLKTHVKTKH 588

Probable transcriptional activator.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
291223509	852	PREDICTED: enhancer binding protein-like	0.604	0.091	0.380	7e-09
72028083	939	PREDICTED: uncharacterized protein LOC59	0.813	0.111	0.336	9e-09
18539217	939	enhancer binding protein [Paracentrotus	0.813	0.111	0.336	1e-08
405954203	868	Transcriptional repressor CTCF [Crassost	0.604	0.089	0.369	1e-08
345322786	937	PREDICTED: RE1-silencing transcription f	0.418	0.057	0.424	1e-08
427795365	916	Putative transcriptional repressor ctcf,	0.604	0.085	0.357	8e-08
427788693	875	Putative transcriptional repressor ctcf	0.604	0.089	0.357	1e-07
260833931	473	hypothetical protein BRAFLDRAFT_60349 [B	0.775	0.211	0.330	1e-07
432959345	833	PREDICTED: transcriptional repressor CTC	0.596	0.092	0.373	2e-07
403284745	1190	PREDICTED: LOW QUALITY PROTEIN: RE1-sile	0.310	0.033	0.442	2e-07

>gi|291223509|ref|XP_002731752.1| PREDICTED: enhancer binding protein-like [Saccoglossus kowalevskii]

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           KC  C++   +S  +L  H++      +P K     C LCDY     + +KRH+++HTGE
Sbjct: 445 KCELCERAFGTS-GELARHTKYIHTHEKPHK-----CPLCDYISVESSKIKRHMRSHTGE 498

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           KP+KC  C Y +  ++ LKRHMR+
Sbjct: 499 KPFKCQLCAYASTDNYKLKRHMRV 522

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|72028083|ref|XP_797592.1| PREDICTED: uncharacterized protein LOC593001 [Strongylocentrotus purpuratus]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 11/116 (9%)

Query: 6   CYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWR 65
           C+ C     +ST  L+ + +   +  +P    KC  C +   +S  +L  H +      +
Sbjct: 474 CHLCGRIFRTST--LLRNHENTHSGTKP---YKCELCPKAFGTS-GELGRHMKYMHTHEK 527

Query: 66  PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           P K     C LCDY     + +KRH+++HTGEKPYKC+ C Y +  ++ LKRHMR+
Sbjct: 528 PHK-----CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYASTDNYKLKRHMRV 578

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|18539217|emb|CAD22532.1| enhancer binding protein [Paracentrotus lividus]

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 11/116 (9%)

Query: 6   CYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWR 65
           C+ C     +ST  L+ + +   +  +P    KC  C +   +S  +L  H +      +
Sbjct: 475 CHLCGRIFRTST--LLRNHENTHSGTKP---YKCELCPKAFGTS-GELGRHMKYMHTHEK 528

Query: 66  PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           P K     C LCDY     + +KRH+++HTGEKPYKC+ C Y +  ++ LKRHMR+
Sbjct: 529 PHK-----CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYCSTDNYKLKRHMRV 579

Source: Paracentrotus lividus

Species: Paracentrotus lividus

Genus: Paracentrotus

Family: Echinidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|405954203|gb|EKC21709.1| Transcriptional repressor CTCF [Crassostrea gigas]

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           KC  C+   ++S  +L+ H R      +P K     C  C+Y     + +KRH+++HTGE
Sbjct: 385 KCKECESAFTTS-GELVRHIRYKHTFEKPHK-----CTECEYASVELSKLKRHMRSHTGE 438

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           +PY+C HC Y +  ++ LKRH+RI
Sbjct: 439 RPYQCMHCNYASPDTYKLKRHLRI 462

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|345322786|ref|XP_003430630.1| PREDICTED: RE1-silencing transcription factor-like [Ornithorhynchus anatinus]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 38/66 (57%)

Query: 58  RKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKR 117
           RK  V  RP     Y C LC Y+ + +T + RH++TH+GEKP+KC  C Y     H++ R
Sbjct: 310 RKRDVSSRPCGERPYQCGLCPYSSSQKTHLTRHMRTHSGEKPFKCDQCIYVASNQHEVTR 369

Query: 118 HMRIKH 123
           H R  H
Sbjct: 370 HARQVH 375

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427795365|gb|JAA63134.1| Putative transcriptional repressor ctcf, partial [Rhipicephalus pulchellus]

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           +C  C    ++S  +L+ H R     +R      + C  CDY     + +KRH++ HTGE
Sbjct: 428 QCKECDAAFTTS-GELVRHVR-----YRHTHEKPHRCTECDYASVELSKLKRHMRCHTGE 481

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           +PY+C HC Y +  ++ LKRH+RI
Sbjct: 482 RPYQCPHCTYASPDTYKLKRHLRI 505

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427788693|gb|JAA59798.1| Putative transcriptional repressor ctcf [Rhipicephalus pulchellus]

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           +C  C    ++S  +L+ H R     +R      + C  CDY     + +KRH++ HTGE
Sbjct: 387 QCKECDAAFTTS-GELVRHVR-----YRHTHEKPHRCTECDYASVELSKLKRHMRCHTGE 440

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           +PY+C HC Y +  ++ LKRH+RI
Sbjct: 441 RPYQCPHCTYASPDTYKLKRHLRI 464

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260833931|ref|XP_002611965.1| hypothetical protein BRAFLDRAFT_60349 [Branchiostoma floridae] gi|229297338|gb|EEN67974.1| hypothetical protein BRAFLDRAFT_60349 [Branchiostoma floridae]

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 15/115 (13%)

Query: 5   FCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVW 64
           FC +C +++      +  H+K        +    C HC    S++  ++L        V 
Sbjct: 276 FCDYCAVSMSYLKSHMANHAK--------EKPFHCEHCG--FSTARKEILRGHVATHNVE 325

Query: 65  RPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHM 119
           +P     Y C LC+++ N + D+KRH+ THTGEKPY C  CGY T + H L+ HM
Sbjct: 326 KP-----YRCELCNFSTNHKHDLKRHIATHTGEKPYNCDICGYATSQKHYLRDHM 375

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432959345|ref|XP_004086251.1| PREDICTED: transcriptional repressor CTCF-like [Oryzias latipes]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 38  KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE 97
           KC  C     +S  +L+ H R      +P K     C +CDY     + +KRH+++HTGE
Sbjct: 386 KCTDCDMAFVTS-GELVRHRRYKHTHEKPFK-----CSMCDYASVEVSKLKRHIRSHTGE 439

Query: 98  KPYKCSHCGYETLRSHDLKRHMR 120
           +P++CS C Y +  ++ LKRHMR
Sbjct: 440 RPFQCSLCSYASRDTYKLKRHMR 462

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403284745|ref|XP_003933717.1| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor [Saimiri boliviensis boliviensis]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C LC Y+ + +T + RH++TH+GEKP+KC  C Y     H++ RH R  H
Sbjct: 383 YKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 434

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
ZFIN|ZDB-GENE-060503-152	224	si:dkey-20i20.9 "si:dkey-20i20	0.620	0.357	0.413	2.8e-12
ZFIN|ZDB-GENE-071004-66	346	zgc:173816 "zgc:173816" [Danio	0.798	0.297	0.393	4.1e-12
ZFIN|ZDB-GENE-050306-35	281	zgc:113102 "zgc:113102" [Danio	0.844	0.387	0.347	2.6e-11
UNIPROTKB|P80944	148	ZFX "Zinc finger X-chromosomal	0.875	0.763	0.300	2.8e-11
UNIPROTKB|Q29419	148	ZFY "Zinc finger Y-chromosomal	0.875	0.763	0.300	2.8e-11
UNIPROTKB|O42424	179	ZNF6 "ZNF6 protein" [Gallus ga	0.674	0.486	0.333	3.5e-11
ZFIN|ZDB-GENE-050320-63	407	zgc:112958 "zgc:112958" [Danio	0.844	0.267	0.347	4.7e-11
UNIPROTKB|F1NMT1	559	ZFP64 "Uncharacterized protein	0.875	0.202	0.328	8.4e-11
UNIPROTKB|J9P8G2	688	J9P8G2 "Uncharacterized protei	0.798	0.149	0.358	9e-11
FB|FBgn0260741	538	CG3281 [Drosophila melanogaste	0.806	0.193	0.330	1e-10

ZFIN|ZDB-GENE-060503-152 si:dkey-20i20.9 "si:dkey-20i20.9" [Danio rerio (taxid:7955)]

 Score = 144 (55.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
 Identities = 36/87 (41%), Positives = 43/87 (49%)

Query:    35 NKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTH 94
             N L C  C + LS    +L  H R        G+   Y C  CD   +   ++K H +TH
Sbjct:   115 NSLTCTQCGKTLSCK-SNLKKHMRI-----HTGEK-PYQCSHCDKRFSFLQNLKAHERTH 167

Query:    95 TGEKPYKCSHCGYETLRSHDLKRHMRI 121
             TGEKPYKCSHC      S  LK HMRI
Sbjct:   168 TGEKPYKCSHCDKRFGHSEVLKTHMRI 194

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-071004-66 zgc:173816 "zgc:173816" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 46/117 (39%), Positives = 56/117 (47%)

Query:     6 CYHCNLTLPSSTEALILHSKICSAVNRPDNK-LKCYHCKQVLSSSMDDLLFHSRKCAVVW 64
             C HCN    S T  L  H +     N    K  KC HC +  S S ++L  H R      
Sbjct:   151 CSHCNKRF-SHTGHLKTHER-----NHTGEKPYKCSHCDKRFSQS-ENLKRHERI----- 198

Query:    65 RPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               G+   Y C  CD   +   ++KRH + HTGEKPYKCSHC      S D+KRH RI
Sbjct:   199 HTGEK-PYKCSHCDKRFSQPENLKRHERIHTGEKPYKCSHCDKRFSVSGDMKRHERI 254

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050306-35 zgc:113102 "zgc:113102" [Danio rerio (taxid:7955)]

 Score = 158 (60.7 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 42/121 (34%), Positives = 58/121 (47%)

Query:     1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKC 60
             M++  C  C  T  ++ + L +H +  +   RP    KC HC +  S  +  L+ H R  
Sbjct:   130 MREHICLECEKTFITAVK-LKIHERTHTG-ERP---YKCSHCDKRFSQ-LGSLIKHKRI- 182

Query:    61 AVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
                   G+   Y C  CD   N    +K+H + HTGEKPYKCSHC     +S  LK H R
Sbjct:   183 ----HTGEK-PYKCSYCDKRFNQSGILKKHERIHTGEKPYKCSHCDKRFNQSGILKTHER 237

Query:   121 I 121
             I
Sbjct:   238 I 238

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P80944 ZFX "Zinc finger X-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 37/123 (30%), Positives = 60/123 (48%)

Query:     2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKL-KCYHCKQVLSSSMDDLLFHSRKC 60
             K + C  C     S   AL  H  +     +  NK+ KC  C+     + +  L +    
Sbjct:    14 KAIECDECGKHF-SHAGALFTHKMVHK--EKGANKMHKCKFCEY---ETAEQGLLNRHLL 67

Query:    61 AVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
             AV     K+F ++C  C       +++K+H++ HTGEKPY+C +C Y +  S +LK H++
Sbjct:    68 AV---HSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVK 124

Query:   121 IKH 123
              KH
Sbjct:   125 TKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q29419 ZFY "Zinc finger Y-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 37/123 (30%), Positives = 60/123 (48%)

Query:     2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKL-KCYHCKQVLSSSMDDLLFHSRKC 60
             K + C  C     S   AL  H  +     +  NK+ KC  C+     + +  L +    
Sbjct:    14 KAIECDECGKHF-SHAGALFTHKMVHK--EKGANKMHKCKFCEY---ETAEQGLLNRHLL 67

Query:    61 AVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
             AV     K+F ++C  C       +++K+H++ HTGEKPY+C +C Y +  S +LK H++
Sbjct:    68 AV---HSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVK 124

Query:   121 IKH 123
              KH
Sbjct:   125 TKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|O42424 ZNF6 "ZNF6 protein" [Gallus gallus (taxid:9031)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/90 (33%), Positives = 48/90 (53%)

Query:    34 DNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQT 93
             D + K + CK     + +  L +    AV     K+F +VC  C       +++K+H++T
Sbjct:    64 DKEPKLHKCKYCDYETAEQGLLNRHLLAV---HSKNFPHVCVECGKGFRHPSELKKHMRT 120

Query:    94 HTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
             HTGEKPY+C HC +      +LK H++ KH
Sbjct:   121 HTGEKPYQCQHCVFRCADQSNLKTHIKTKH 150

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

ZFIN|ZDB-GENE-050320-63 zgc:112958 "zgc:112958" [Danio rerio (taxid:7955)]

 Score = 160 (61.4 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 42/121 (34%), Positives = 59/121 (48%)

Query:     1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKC 60
             +++  C+ C  T  ++ E L LH +I +   +P    KC HC +  S  + +L  H R  
Sbjct:   208 VREFVCFECEKTF-TTAEHLKLHQRIHTG-EKP---YKCSHCNKGFSR-LGNLKTHERV- 260

Query:    61 AVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
                   G+   Y C LC    +    MK H + HTGEKPYKCSHC     +  +LK H R
Sbjct:   261 ----HTGEE-PYKCSLCYMRFSQPDSMKVHERIHTGEKPYKCSHCDVTFTQIGNLKTHER 315

Query:   121 I 121
             I
Sbjct:   316 I 316

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NMT1 ZFP64 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 160 (61.4 bits), Expect = 8.4e-11, P = 8.4e-11
 Identities = 41/125 (32%), Positives = 59/125 (47%)

Query:     1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKC 60
             +K   C HC+     S+ +L  H +I S   RP    KC  C    S +   L  H R  
Sbjct:   263 VKPYKCKHCDYAAADSS-SLNKHQRIHSN-ERP---FKCQICPYA-SRNSSQLTVHLRS- 315

Query:    61 AVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
                   G +  + C +C       +D+KRH++ H+GEKPYKC +C        +LK H+R
Sbjct:   316 ----HTGDA-PFQCQMCPAKFKINSDLKRHMRVHSGEKPYKCEYCEVRCAMKGNLKSHIR 370

Query:   121 IKHKI 125
             IKH +
Sbjct:   371 IKHSM 375

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P8G2 J9P8G2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 161 (61.7 bits), Expect = 9.0e-11, P = 9.0e-11
 Identities = 42/117 (35%), Positives = 55/117 (47%)

Query:     6 CYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC-KQVLSSSMDDLLFHSRKCAVVW 64
             C  C +    STE LI H K+ +   RP    KC  C K  +  S  +L+ H R      
Sbjct:   578 CRECRMAFTCSTE-LIRHQKVHTG-ERPH---KCKECGKAFIRKS--ELIHHERS----- 625

Query:    65 RPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               G+   Y C  C       +++ RHL+ HTGEKPYKC  CG   +R   L +H RI
Sbjct:   626 HSGEK-PYKCKECGKAFGRGSELNRHLKIHTGEKPYKCKQCGKAFIRGSHLSKHQRI 681

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

FB|FBgn0260741 CG3281 [Drosophila melanogaster (taxid:7227)]

 Score = 159 (61.0 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 39/118 (33%), Positives = 59/118 (50%)

Query:     6 CYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWR 65
             C HC L+ P S+  L +H +  +     DN  KC  C++    S D L  H R+     R
Sbjct:   296 CPHCGLSFPVSS--LTIHIRRHTG----DNPYKCDQCEKAFPRSQD-LSLHMRQHTGE-R 347

Query:    66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
             P +     C +C      +  + RH++ HTG++PY C  C    ++S+DLK HMR +H
Sbjct:   348 PSE-----CKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMR-RH 399

GO:0005634 "nucleus" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	129
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 86  DMKRHLQTHTGEKPYKCSHCGYETLR 111
           +++RH++THTGEKPYKC  CG     
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	129
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-07
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		7e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-05
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		3e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		9e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 34  DNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQT 93
           +   KC  C +  S S  +L  H R      +P     Y C  C  + +  +D+++H +T
Sbjct: 2   EKPYKCPECGKSFSQS-SNLQKHQR-THTGEKP-----YKCPECGKSFSQSSDLQKHQRT 54
Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           HTGEKPYKC  CG    RS  L RH R 
Sbjct: 55  HTGEKPYKCPECGKSFSRSDHLSRHQRT 82

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 24  SKICSAVNRPDNK-LKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVN 82
           S +  A   P  K   C  C +  S S D L  H R      +P     Y C  C  + +
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRS-DHLAEHQR-THTGEKP-----YKCPECGKSFS 60
Query: 83  GRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            + D+ RH +THTGEKPYKC  CG    +  +L+ H R 
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT 99

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHM 119
           + C +C      R +++ H+ +HTGE PYKCS C  + ++  DL+ HM
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH  I+H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 64  WRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           W+  +   Y C  C  + +  +D+ +H +THTGEKPYKC  CG   ++   L  H R+
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 34  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 83

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 77  CDYNVNGRT-----DMKRHLQTHTGEKPYKC--SHCGYETLRSHDLKRHMR 120
           CDY   G+T      +K HL+THTGEKPY C    CG++  RS +L RH R
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 59

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +  T + +H++THTGEKP+ C  CG +    H   RH +I
Sbjct: 35  FQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKI 84

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 77  CDYNVNGRT-----DMKRHLQTHTGEKPYKC--SHCGYETLRSHDLKRHMR 120
           CDY   G+T      +K HL+THTGEKPY C    CG++  RS +L RH R
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 58

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
           Y C  C    + ++DMK+H   HTGEKP+KC  CG    +S +L  H R
Sbjct: 30  YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           G S  + C +C    + +  +K H++ HTG KPYKC  C Y    S  L +H+RI
Sbjct: 4   GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  +   + ++  H   HTGEKPY+C+ CG +  R  +LK H RI
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N + +  +  H++THTGEKP+ C  CG +    H   RH +I
Sbjct: 35  FQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTRTRHTKI 84

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 74  CCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHK 124
           C  C         +  HL+THTGEKPYKC  C Y   +   L+ H+   HK
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 87  MKRHLQTHTGEKPYKCS--HCGYETLRSHDLKRHMR 120
           +K HL+THTGEKPYKC+   C +   RS +L RH R
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C    +  + + +H + HTGEKPYKC  CG    ++  L  H RI
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	129
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-04

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.4 bits (145), Expect = 3e-13
 Identities = 13/50 (26%), Positives = 30/50 (60%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
             C  C Y+ + +  ++ H + H  ++P+KC++C ++T +  +L +HM+ 
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 8e-10
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + +   P KCS C Y       L+ H RI
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERI 31

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.7 bits (130), Expect = 6e-11
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 88  KRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
               +TH+GEKPY+C  C     +S  +K H+  KH
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH 39

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGE--KPYKCSHCGYETLRSHDLKRHMRIKH 123
           Y C +C         MK H+     E    + C HC     R  DL  H+R +H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH  I
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.2 bits (90), Expect = 5e-05
 Identities = 7/49 (14%), Positives = 15/49 (30%), Gaps = 1/49 (2%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
           + C +C        + KRH        P           +++ L+  + 
Sbjct: 32  FACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVA 79

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 1e-10
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQT--HTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI 125
           Y C +C       ++  RH  T      K Y C  C  E  R  ++  H++I HKI
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           T  GE  Y+C  C        +  RH    H
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSH 34

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 5e-10
 Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 3/55 (5%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHT---GEKPYKCSHCGYETLRSHDLKRHMRIKH 123
             C +C +    +  +  H + H        + C  CG    +   +  H    H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 1e-06
 Identities = 7/28 (25%), Positives = 11/28 (39%)

Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            +G    +C  CG+   +   L  H R 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRK 29

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 51.3 bits (124), Expect = 5e-10
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  N +    +  H++THTGEKP+ C  CG +  RS + KRH +I
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.5 bits (122), Expect = 1e-09
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C    + +  +K H++ HTG KPYKC  C Y    S  L +H+RI
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.1 bits (121), Expect = 2e-09
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  CDY     + + +HL+ H+ E+P+KC  C Y +  S  L  H+R 
Sbjct: 37  YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 45.1 bits (108), Expect = 2e-07
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           +     P+KC  CG    R   LK HMR 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC 30

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 35.5 bits (83), Expect = 8e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC 102
           + C +C Y     + +  HL++HTG+     
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.6 bits (117), Expect = 2e-09
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEKPY C  CG        LK H+RI
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI 33

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 88  KRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           KRH + HTG KP++C  C  +  RS  LK H R 
Sbjct: 55  KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS--HCGYETLRSHDLKRHMRI 121
           + C  C    +    +K H +THTGEKP+ C    C  +  RS +L RH  +
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 46.4 bits (111), Expect = 9e-08
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 13/57 (22%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS--HCGYETLRSHDLKRHMRI 121
            K +  +  L           + H + HTGEKPY+C    C     RS  LKRH R 
Sbjct: 15  NKRYFKLSHL-----------QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 6/29 (20%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 95  TGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           + ++P+ C++  C     +   L+ H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRK 30

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEKPYKC  CG   ++   L+ H+ I
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI 33

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.8 bits (117), Expect = 4e-09
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 86  DMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           ++ RH++ HTG+KP++C  C     RS  L  H+R 
Sbjct: 36  ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 90  HLQTH--TGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           +L  +     +PY C    C     RS +L RH+RI
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 1e-08
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y+C  C       + +K+H++THT  +PY C++C +      +L +HM+ 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  +   + ++  H   HTGEKPY+C+ CG +  R  +LK H RI
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            H      +KPYKC  C        +L  H  +
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV 39

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 72  YVCCLCDYNVNGRT-----DMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           +VC     +   R       +  H++ HTGEKP+KC+   C     R  +LK H+R 
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKH 123
           K HL++HTGEKPY C H  C      + D  +H    H
Sbjct: 86  KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 86  DMKRHLQ-THTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           D  +H   TH+ EKPY C    C         L++H++ 
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.2 bits (113), Expect = 3e-08
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 86  DMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           ++ RH + HTG KP++C  C     RS  L  HM+ 
Sbjct: 62  ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K HL+THTGEKPYKC+   C +   RS +L RH R 
Sbjct: 34  KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           GK F  V  L            RH  +H+GEKPY C  CG    R   +  H+R 
Sbjct: 14  GKIFRDVYHL-----------NRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS 57

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 7/28 (25%), Positives = 9/28 (32%)

Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            +G     C  CG      + L RH   
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS 29

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 13/59 (22%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE--KPYKCSHCGYETLRSHDLKRHMRIKH 123
           G  F             +  M  H+++H G   KPY C  CG    R   L  H++  H
Sbjct: 42  GLRFKR-----------KDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 46.3 bits (111), Expect = 7e-08
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 11/55 (20%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           GKSF +           ++   RH+  H G +PY C  CG +    H L  HM+I
Sbjct: 16  GKSFTH-----------KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCG 106
           Y C +C      +  +  H++ HTG KPY+C+ C 
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA 72

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRI 121
             +G+K Y C  CG          RHM +
Sbjct: 4   GSSGDKLYPC-QCGKSFTHKSQRDRHMSM 31

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 3/17 (17%), Positives = 6/17 (35%)

Query: 90  HLQTHTGEKPYKCSHCG 106
           H    +  K Y+ +   
Sbjct: 82  HRHVTSCTKSYEAAKAE 98

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 7e-08
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKP++C  CG     S  L +H+R 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 1e-04
 Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 11/38 (28%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           G +F++ C L            +HL++H    P   S 
Sbjct: 19  GMNFSWSCSL-----------FKHLRSHERTDPSGPSS 45

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 45.6 bits (109), Expect = 9e-08
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +THTGEKPY CSHC     +   L  H + 
Sbjct: 5   SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR 37

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGE----KPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  CD     +  +  H + +         + CS CG    R + + RH   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN 69

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 9/35 (25%), Positives = 12/35 (34%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCG 106
           +VC  C      R  M RH     G    +  + G
Sbjct: 48  FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 44.6 bits (106), Expect = 9e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 90  HLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
              + TGEKP+ C+   CG+   RS +L RH R 
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 88  KRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            RH + HTG +P++C  C     RS  L  HM+ 
Sbjct: 54  TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K HL+THTGEKPY C    CG++  RS +L RH R 
Sbjct: 24  KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.1 bits (108), Expect = 1e-07
 Identities = 21/50 (42%), Positives = 28/50 (56%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C    + ++DMK+H   HTGEKP+KC  CG    +S +L  H R 
Sbjct: 30  YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           + C +C  +    + +  HL  H+  +PY C +CG    +  D+K+H  I
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 51

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC  CG    R+  L RH  I
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI 34

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKPY C +CG     S +L RH RI
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI 34

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           YVC  C        ++ RH + HTGEKP   S 
Sbjct: 13  YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKP+KC  CG    ++  L  H+RI
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 89  RHLQTHTGEKPYKCSHCGYE-TLRSHDLKRHMRI 121
               + +  K ++C  CG   TL+SH L +H RI
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSH-LNQHQRI 34

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY C  CG     +  L +H R+
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV 34

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           +VC +C      +  +KRH ++HT EKPY C  C     R   L RH +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.6 bits (104), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP++C+ CG     S  L  H RI
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRI 34

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           + C  C  + +  + +  H + HTGEKP   S 
Sbjct: 13  FECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
             C  C      +  +K H + HTGEKP++C  CG    R  +L  H  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA 56

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
                +  E+ + CS C     R  +L+ HM  
Sbjct: 56  ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS 88

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           + C +C      R +++ H+ +HTGE PYKCS C  + ++  DL+ HM   H
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            +G    +C  C  + L  + LK H R 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRK 29

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K H +THTGEKP+ CS   C     RS +L RH R 
Sbjct: 36  KAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY C  CG   +    L+ H RI
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI 34

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           +VC  C       + +KRH   HTGEKP++C+   CG       +L+ H+RI
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 13/57 (22%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           GK F+              +++ H++ HTG++PY C    C  +  +S +LK H+  
Sbjct: 71  GKRFSL-----------DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 116

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKCS CG    R   L  H + 
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS 34

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C      ++ +  H Q+HTGE+    S
Sbjct: 13  YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY C+ CG   + S  L +H+R+
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV 34

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C +C         + +HL+ HT E     S 
Sbjct: 13  YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKPYKCS CG    R   L  H RI
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI 34

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGE+PY C+ CG       +L +H +I
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI 34

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y+C +C      R+++ +H + HTGEKP   S 
Sbjct: 13  YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + +GE+PY C+ CG    R   L  H++ 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR 34

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 11/37 (29%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           GK+F              + +  HL+ H  EK    S
Sbjct: 19  GKNFGR-----------HSHLIEHLKRHFREKSSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + +GEKPYKC  CG    R  DL  H R+
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV 34

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C      R D+  H + HTGEK    S
Sbjct: 13  YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               +  GE+ ++CS CG   L++ +  +H RI
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI 34

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +G+KPY+C  C    ++   L +H R+
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV 34

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC+ CG    ++  L RH  I
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI 34

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.1 bits (82), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       + + RH   HTGEKP   S 
Sbjct: 13  YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKPYKC+ CG    ++  L  H RI
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI 34

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC+ CG    ++  L RH RI
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI 34

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C    +  + + RH + HTGEKP   S 
Sbjct: 13  YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC+ CG     +  L RH RI
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI 34

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       + + RH + HTGEKP   S 
Sbjct: 13  YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+C  C     +   L +H + 
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT 34

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGE+P+KC+ CG   ++S  L +H RI
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI 34

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K H  +HT + PY+C H  C         LKRH ++
Sbjct: 20  KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV 55

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 88  KRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           KRH + H G    K   C +         +H+   H
Sbjct: 50  KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TG+KP++C+HCG       +L  H RI
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEK YKC+ CG    R+  L +H +I
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI 34

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEK Y C  CG    R+  L +H R+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEK +KC  C     ++  L+ H  +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           + C  CD   +  + ++ H   H GEKP   S
Sbjct: 13  WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGE+ Y+CS CG    R   L  H RI
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRI 34

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C      ++ +  H + HTGEKP   S 
Sbjct: 13  YECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+C  CG    ++  L +H R+
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV 34

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C    +  T + +H + HTGEKP   S 
Sbjct: 13  YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC+ CG    ++  L  H RI
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI 34

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
              + TG+KPY+C  CG   +++  L RH R  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC  CG   +   DL  H  +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV 34

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C      R D+  H   HTGEKP   S
Sbjct: 13  YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKP+KC  CG        L RH  +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV 34

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           + C +C  +  GR+ + RH   HT EKP   S
Sbjct: 13  FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKP+KC  CG    ++  L  H R+
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.6 bits (101), Expect = 5e-07
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + T  K Y C+ CG    R   L RH +I
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI 34

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GE+P+KC+ CG    R   L  H+R+
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL 34

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+C  CG    +  +L +H RI
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI 34

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C      + ++ +H + HTGEKP   S 
Sbjct: 13  YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 5e-07
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           R        + YKC  CG     S DL +H R 
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 40

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.8 bits (102), Expect = 7e-07
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           GKSF++            +D+ +H +THTGEKPYKC  CG   ++   L  H R+
Sbjct: 25  GKSFSH-----------SSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPY C+ CG       +L +H +I
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI 34

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y+C  C      R+++ +H + HT +KP   S 
Sbjct: 13  YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC  CG     S  L +H  +
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV 34

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+CS CG    +   L  H +I
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI 34

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C +C  +   ++ +  H Q HTGEKP   S 
Sbjct: 13  YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEKPY+CS CG     S+ L +H   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT 34

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C  + +G   + +H  THT EKP   S
Sbjct: 13  YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPY C+ CG   ++   L RH RI
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI 34

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP++CS C        +L  H R 
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT 34

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           + C  C    N ++++  H +THTGEKP   S
Sbjct: 13  FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 44.6 bits (106), Expect = 6e-07
 Identities = 5/35 (14%), Positives = 10/35 (28%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
                   +       C       H+L  H+ ++H
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 82  NGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
             +  +  H++ HTGEKP+ C    CG    RS +LK H R 
Sbjct: 73  KAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 88  KRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K H +THTGEKP+KC    C      S D K+HM +
Sbjct: 109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + + EKPYKC  CG    R  +L  H R+
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV 34

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TG++PY+C  CG        L  H R 
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS 34

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TG KPY C+ CG        L  H R 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT 34

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP+KC  CG    +   L +H R+
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV 34

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           + C  C  + N R  + +H + HTGEKP   S 
Sbjct: 13  FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.1 bits (108), Expect = 6e-07
 Identities = 21/50 (42%), Positives = 25/50 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  + +    +  H +THTGEKPYKC  CG       DL RH R 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT 71

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.7 bits (107), Expect = 7e-07
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  + + + D+ RH +THTGEKPYKC  CG    +  +L+ H R 
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT 99

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.7 bits (107), Expect = 9e-07
 Identities = 19/50 (38%), Positives = 27/50 (54%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  + + R +++ H +THTGEKPY C  CG    +   L+ H R 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT 127

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 20/50 (40%), Positives = 25/50 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C  + +   ++  H +THTGEKPYKC  CG    R   L  H R 
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
                  GEKPY C  CG    RS  L  H R 
Sbjct: 11  AQAALEPGEKPYACPECGKSFSRSDHLAEHQRT 43

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.8 bits (102), Expect = 6e-07
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C  C    +  + + +H + HTGEKPYKC  CG    ++  L  H RI
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
                H+GEKPY C  CG    RS  L +H R+
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV 36

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-07
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TG KPY C+ CG        L  H  I
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI 34

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               +  GEKPY CS CG        L  HMR 
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT 34

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP++C  CG     +  L  H RI
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI 34

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 8e-07
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 83  GRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           G +           +K + C  CG    +S++L  H R 
Sbjct: 1   GSSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT 39

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 2e-06
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           Y C +C      +  ++ H   H+ EKP+KC  CG    +S  L  H  +
Sbjct: 46  YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL 95

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.2 bits (100), Expect = 8e-07
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
              + +  KPY C  CG    R   L  H++  H
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.6 bits (88), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQ-THTGEKPYKCSHCG 106
           Y+C  C    +    +  H++  HT E+P+KC    
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+CS CG        L  H RI
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI 34

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C +C    + R  +  H + H+G+KP   S 
Sbjct: 13  YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPYKC+ CG        L  H   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.8 bits (99), Expect = 9e-07
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEKPY+C  CG    +   L  H+R+
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV 33

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 9e-07
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  G  PYKCS C         L  H R+
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM 34

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C+ + +G+  +  H + HT EKP   S
Sbjct: 13  YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+C+ CG       +L  H +I
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI 34

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C      R+++  H + HTGEKP   S 
Sbjct: 13  YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKP++C  CG    ++  L  H R+
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV 34

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 9e-07
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGE PY+C  CG    R   L  H + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKT 34

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + +GEKPY+C+ CG   +    L  H R 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERT 34

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPY+CS CG   ++   L  H RI
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI 34

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C  +   ++ +  H + HTGE P   S 
Sbjct: 13  YECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC+ CG    ++  L RH  I
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI 34

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       + + RH   HTGEKP   S 
Sbjct: 13  YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           G ++N    L           + HL  HTGEKP+ C    C       H L RH   
Sbjct: 21  GAAYNKNWKL-----------QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT 66

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 68  KSFNYVCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           K   YVC    C         +K H  +HT + PY+C H  C         LKRH ++
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV 158

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 13/59 (22%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKH 123
            K F  +  L            RH  THTGEK + C    C        ++K+H    H
Sbjct: 51  EKGFTSLHHL-----------TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 2/34 (5%)

Query: 90  HLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
                   K Y CS   CG    ++  L+ H+  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK 36

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKCS CG        L+ H + 
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC 34

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C  +   ++ ++ H + HTGE+    S
Sbjct: 13  YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC  CG       +L  H ++
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV 34

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           Y C  C    N + ++  H + HTGE+P   S
Sbjct: 13  YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGE P+ CS CG       +L  H +I
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKI 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC  C         L  H RI
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI 34

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPY+C  C         L +H R+
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV 34

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C +C    +    + +H + H+GEKP   S 
Sbjct: 13  YECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TG K ++C+ CG    R   L  H +I
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI 34

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           + C  C      ++ +  H + HTGEKP   S 
Sbjct: 13  FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP+KC  CG    R   L  H ++
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL 34

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           + C  C    + R+ +  H + HTGEKP   S 
Sbjct: 13  FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TG+KPYKC+ CG    ++  L RH  I
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI 34

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       + + RH   HTGEKP   S 
Sbjct: 13  YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC  CG     +    +H R+
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL 34

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       +   +H + HTG++P   S 
Sbjct: 13  YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 14/58 (24%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHL-QTHTGEKPYKCSH--CGYETLRSHDLKRHMRI 121
           G+ F+    L             H    H  +K + C    CG        LK HM++
Sbjct: 16  GRIFSNRQYL-----------NHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 2/32 (6%)

Query: 94  HTGEKPYKCSH--CGYETLRSHDLKRHMRIKH 123
            +G     C    CG        L  H + +H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 11/40 (27%)

Query: 67  GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCG 106
           GKSFN+           +  +K H++ H+  + Y C   G
Sbjct: 47  GKSFNF-----------KKHLKEHMKLHSDTRDYICEFSG 75

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKP KC+ CG        L  H R 
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT 34

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 12/33 (36%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TG KPY CS C         L  H R 
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS 34

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC+ CG       +L  H  I
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI 34

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGE PY+C  CG    R + L  H R 
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRT 34

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C    + +  +  H +TH GEKP   S 
Sbjct: 13  YECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GEK YKC  CG E  +S  L+ H R+
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV 34

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPYKC+ CG    ++  L RH R+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV 34

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C       + + RH + HTG KP   S 
Sbjct: 13  YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGE+ Y+CS CG   ++   L  H RI
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRI 34

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C      ++ +  H + H GEKP   S 
Sbjct: 13  YECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TG KPY+C+ CG    ++  L RH R+
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV 34

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C    +  + + RH + HTGEKP   S 
Sbjct: 13  YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKP+ C  CG        L +H RI
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI 34

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           + C  C    +    + +H + HTGEKP   S 
Sbjct: 13  FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               + TGEKPY+C+ CG        L  H  I
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI 34

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH 104
           Y C  C    + R+ +  H   HTG+KP   S 
Sbjct: 13  YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + +GEKPY C+ CG    +   L  H R 
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRT 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.8 bits (96), Expect = 2e-06
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
             +  TG KP++C  C     RS  L  H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 2e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + TGEKPY+C+ C        +L  H R 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT 34

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + +GEKP+KC  CG     +     H R 
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  G+K +KC+ C     +S  L  H RI
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI 34

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.2 bits (95), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 92  QTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +GE PY+CS CG    R   L  H R 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRT 32

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRI 121
             +GEKPY C+ C      ++ L +H ++
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKM 32

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.3 bits (95), Expect = 4e-06
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              + +GEK + C  CG        L+ H R+
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRV 34

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.7 bits (95), Expect = 7e-06
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 26  ICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFN---YVCCLCDYNVN 82
            C  ++          C +  S+ M +L+ H     V      +       C     +  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFST-MHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73

Query: 83  GRTDMKRHLQTHTGEKPYKCS 103
            +  +  H++ HTGEK    S
Sbjct: 74  AKYKLVNHIRVHTGEKSGPSS 94

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.1 bits (92), Expect = 9e-06
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 92  QTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +G++ Y+C  CG    +   L  H RI
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERI 32

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
              +  GE PY C  CG    +   L  H R 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS 33

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (88), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
               +  GE P+KCS C     + + L +H R 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRI 121
             +GEKP+ CS C         L  H + 
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQT 32

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 34.4 bits (80), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS 103
           + C  C+   + ++ +  H QTH  EKP   S
Sbjct: 11  FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 8/40 (20%), Positives = 13/40 (32%)

Query: 84  RTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
            +  K +    TG   ++C  C        +L  HM    
Sbjct: 4   GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 2/98 (2%)

Query: 23  HSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVN 82
             K+  ++    +K +C  C     + + +L  H  +                   ++  
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDT-LVELTVHMNETGHYRDDNHE-TDNNNPKRWSKP 63

Query: 83  GRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR 120
            +  +         +K  KC +CG+      DL  HM 
Sbjct: 64  RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 71  NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC 105
              C +C         + RH  +H+GEKPY     
Sbjct: 12  QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 36.1 bits (82), Expect = 9e-04
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI 125
           +VC LC    +    +K+H++    E    C  C  E   +     H+  KH I
Sbjct: 75  FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 35.0 bits (80), Expect = 9e-04
 Identities = 11/45 (24%), Positives = 17/45 (37%)

Query: 85  TDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS 129
               +  + H G++  KCS CG   +R   L R      +   K 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKD 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	129
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.95
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.71
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.67
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.66
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.66
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.57
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.57
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.57
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.56
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.5
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.49
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.48
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.42
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.42
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.42
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.4
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.4
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.4
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.39
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.39
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.38
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.38
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.38
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.37
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.37
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.37
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.36
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.28
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.28
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.27
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.23
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.22
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.17
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.0
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	99.0
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.99
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.98
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.96
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.95
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.95
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.95
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.94
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.93
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.89
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.87
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.86
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.85
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.83
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.83
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.82
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.8
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.78
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.77
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.77
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.77
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.75
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.74
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.72
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.69
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.65
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.63
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.57
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.53
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.91
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.49
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.42
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.41
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.39
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.38
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.32
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.64
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.29
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.23
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.54
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.21
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.2
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.94
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.89
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.52
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.18
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.88
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.78
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.6
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.44
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	93.66
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.22
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.68
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	91.25
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.22
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.94
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	89.89
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	89.4
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	88.59
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	87.02
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	85.86
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	85.74
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	84.23
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	83.54
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	82.94
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	82.68
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	82.56
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	81.13
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	80.05

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=2.3e-29  Score=156.11  Aligned_cols=115  Identities=27%  Similarity=0.489  Sum_probs=75.5

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcC
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNV   81 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~   81 (129)
                      ++|.|+.|++.|.. ...|..|+..|.    ++++|.|+.|++.|.+.. .|..|++.+.      ...+|.|+.|++.|
T Consensus        76 ~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f  143 (190)
T 2i13_A           76 KPYKCPECGKSFSQ-RANLRAHQRTHT----GEKPYACPECGKSFSQLA-HLRAHQRTHT------GEKPYKCPECGKSF  143 (190)
T ss_dssp             CCEECTTTCCEESC-HHHHHHHHHHHH----TCCCEECTTTCCEESSHH-HHHHHHHHHH------CCCCEECTTTCCEE
T ss_pred             CCccCcccCCccCC-HHHHHHHHHhcC----CCCCCcCCCCCCccCCHH-HHHHHHHHhC------CCCCeECCCCCccc
Confidence            34555555555555 555555555555    455555555555555554 5555555421      23458888888888


Q ss_pred             CChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         82 NGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        82 ~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      .....|..|+++|.+++||.|..|++.|...+.|..|+++|+|++||
T Consensus       144 ~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          144 SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             SCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             CCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            88888888888888888888888888888888888888888888886

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=7.3e-28  Score=139.86  Aligned_cols=117  Identities=25%  Similarity=0.506  Sum_probs=106.0

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|+|+.|++.|.. ...|..|+..|.    ++++|.|+.|++.|.+.. .|..|+.....   .....+|.|++|++.
T Consensus         5 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~~~~---~~~~~~~~C~~C~~~   75 (124)
T 2dlq_A            5 SSGVECPTCHKKFLS-KYYLKVHNRKHT----GEKPFECPKCGKCYFRKE-NLLEHEARNCM---NRSEQVFTCSVCQET   75 (124)
T ss_dssp             CSSCCCTTTCCCCSS-HHHHHHHHHHHS----SCCSCBCTTTCCBCSSHH-HHHHHHHHCCC---CSCCCCEECSSSCCE
T ss_pred             CCCCCCCCCCCcCCC-HHHHHHHHHhCC----CCCCeECCCCCchhcCHH-HHHHHHhhhhc---CCCCCCeECCCCCCc
Confidence            478999999999999 999999999998    899999999999999998 99999986432   345568999999999


Q ss_pred             CCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHh-hhccc
Q psy13444         81 VNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI-KHKIV  126 (129)
Q Consensus        81 ~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~-~~~~~  126 (129)
                      |.....|..|+++|.+++||.|..|++.|...+.|..|++. |.++.
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           76 FRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             ESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999999999999999999985 55543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=8e-28  Score=149.15  Aligned_cols=115  Identities=28%  Similarity=0.520  Sum_probs=85.4

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcC
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNV   81 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~   81 (129)
                      ++|+|+.|++.|.. ...|..|+..|.    ++++|.|+.|++.|.+.. .|..|+..+.      ...+|.|+.|++.|
T Consensus        48 ~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f  115 (190)
T 2i13_A           48 KPYKCPECGKSFSD-KKDLTRHQRTHT----GEKPYKCPECGKSFSQRA-NLRAHQRTHT------GEKPYACPECGKSF  115 (190)
T ss_dssp             CCEECTTTCCEESS-HHHHHHHHHHHH----CCCCEECTTTCCEESCHH-HHHHHHHHHH------TCCCEECTTTCCEE
T ss_pred             CCccCCCcCchhCC-HHHHHHHHHhcC----CCCCccCcccCCccCCHH-HHHHHHHhcC------CCCCCcCCCCCCcc
Confidence            45666666666666 666666666665    556666666666666665 6666665422      23458888899998


Q ss_pred             CChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         82 NGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        82 ~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      .....|..|++.|.+++||.|..|++.|...+.|..|+++|++++||
T Consensus       116 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A          116 SQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             CCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCe
Confidence            88888999998888888999999999999999999999998888876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=3.3e-27  Score=137.26  Aligned_cols=116  Identities=21%  Similarity=0.411  Sum_probs=100.0

Q ss_pred             CCccccc--ccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCC--
Q psy13444          1 MKDVFCY--HCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL--   76 (129)
Q Consensus         1 ~k~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~--   76 (129)
                      +++|.|+  .|++.|.. ...|..|+.+|     ++++|.|..|++.|.+.. .|..|++.      +....+|.|..  
T Consensus         3 ~~~~~C~~~~C~~~f~~-~~~l~~H~~~h-----~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~~~   69 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRD-NSAMRKHLHTH-----GPRVHVCAECGKAFVESS-KLKRHQLV------HTGEKPFQCTFEG   69 (124)
T ss_dssp             --CEECCSTTCCCEESS-HHHHHHHHGGG-----SCCCEECTTTCCEESSHH-HHHHHGGG------TSCCCCEECCSTT
T ss_pred             CCcccCCCCCCcCccCC-HHHHHHHHHHc-----CCCCeECCCCCchhCCHH-HHHHHHHH------cCCCCCeeCCCCC
Confidence            4789999  89999999 99999999887     468899999999999998 99999987      44556799986  


Q ss_pred             CCCcCCChhhHHHHhhhccCCCcccCC--CCCccccCchhHHHHHHhhhcccCCC
Q psy13444         77 CDYNVNGRTDMKRHLQTHTGEKPYKCS--HCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        77 c~~~~~~~~~l~~h~~~h~~~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |++.|.....|..|+++|.++++|.|+  .|++.|...+.|..|+++|+++++++
T Consensus        70 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           70 CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             CcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999999999999999999999996  59999999999999999999999874

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.94  E-value=3.9e-27  Score=141.75  Aligned_cols=116  Identities=23%  Similarity=0.388  Sum_probs=105.0

Q ss_pred             CcccccccccccCCcHHHHHHHHhh-hcccCCCCCc--------ccCccccccccCchhhHHHHHhhcccccCCCCcccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKI-CSAVNRPDNK--------LKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNY   72 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~-~~~~~~~~~~--------~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~   72 (129)
                      ++|.|..|++.|.. ...|..|+.. |.    ++.+        |.|..|++.|.+.. .|..|++.+.      ...+|
T Consensus        24 ~~~~C~~C~~~f~~-~~~L~~H~~~~H~----~~~~~~~~~~~~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~   91 (155)
T 2rpc_A           24 LSRPKKSCDRTFST-MHELVTHVTMEHV----GGPEQNNHVCYWEECPREGKSFKAKY-KLVNHIRVHT------GEKPF   91 (155)
T ss_dssp             CSSSCCCCCCCBSS-HHHHHHHHHTTTS----CCTTCSSCCCCBTTCTTSSCCCSSHH-HHHHHTHHHH------CCCSE
T ss_pred             cccccccCCcccCC-HHHHHHHHHhhcC----CCcccCCccccccCCCCcccccCCHH-HHHHHHHhcC------CCCcc
Confidence            57899999999999 9999999987 65    4433        78999999999998 9999999743      34579


Q ss_pred             ccCC--CCCcCCChhhHHHHhhhccCCCcccCCC--CCccccCchhHHHHHHhhhcccCCC
Q psy13444         73 VCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        73 ~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|..  |++.|.....|..|+++|.+++||.|..  |++.|...+.|..|+++|+|++||.
T Consensus        92 ~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A           92 PCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             ECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             cCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            9998  9999999999999999999999999997  9999999999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=6.2e-27  Score=135.10  Aligned_cols=110  Identities=28%  Similarity=0.543  Sum_probs=102.2

Q ss_pred             CCcccccc--cccccCCcHHHHHHHHhhhcccCCCCCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCC
Q psy13444          1 MKDVFCYH--CNLTLPSSTEALILHSKICSAVNRPDNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL   76 (129)
Q Consensus         1 ~k~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~   76 (129)
                      +++|.|..  |++.|.. ...|..|+..|.    ++++|.|+  .|++.|.+.. .|..|++.+.      ...+|.|+.
T Consensus         4 ~~~~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~   71 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFK-LSHLQMHSRKHT----GEKPYQCDFKDCERRFSRSD-QLKRHQRRHT------GVKPFQCKT   71 (119)
T ss_dssp             SCCBCCCSTTSCCCBSC-HHHHHHHHHHHH----TTCCEECCSTTCCCEESSHH-HHHHHHHHHH------CCCCEECTT
T ss_pred             CeeeeCCCCCCcchhCC-HHHHHHHHHhhC----CCCCccCCCCCCcCccCCHH-HHHHHHHHcC------CCCCccCCc
Confidence            57999997  9999999 999999999998    89999999  7999999998 9999999743      345799999


Q ss_pred             CCCcCCChhhHHHHhhhccCCCcccC--CCCCccccCchhHHHHHHhh
Q psy13444         77 CDYNVNGRTDMKRHLQTHTGEKPYKC--SHCGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        77 c~~~~~~~~~l~~h~~~h~~~k~~~c--~~C~k~f~~~~~l~~h~~~~  122 (129)
                      |++.|.....|..|++.|.++++|.|  +.|++.|...+.|..|+++|
T Consensus        72 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           72 CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             cCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999999999999  89999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2.1e-26  Score=135.42  Aligned_cols=99  Identities=19%  Similarity=0.293  Sum_probs=83.8

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|+|++|++.|.. ...|..|+.+|.    ++++|.|++|++.|.... .|..|++.+      .+..+|.|++|++.
T Consensus        20 ek~y~C~~C~k~F~~-~~~L~~H~~~H~----~~k~~~C~~C~k~F~~~~-~L~~H~~~H------~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           20 RVYYICIVCKRSYVC-LTSLRRHFNIHS----WEKKYPCRYCEKVFPLAE-YRTKHEIHH------TGERRYQCLACGKS   87 (133)
T ss_dssp             EEEEEETTTCCEESC-HHHHHHHHHHHH----CCSCEECSSSSCEESSHH-HHHHHHHHH------HTCCCEEESSSCCE
T ss_pred             CcCeECCCCCCCcCC-HHHHHHHHHHcC----CCCCeeCCccCeeccccc-chhhhcccc------CCCccccCCCCCCC
Confidence            468999999999999 899999999988    889999999999999987 999998874      34457899999999


Q ss_pred             CCChhhHHHHhhhccCCC------cccCCCCCccccC
Q psy13444         81 VNGRTDMKRHLQTHTGEK------PYKCSHCGYETLR  111 (129)
Q Consensus        81 ~~~~~~l~~h~~~h~~~k------~~~c~~C~k~f~~  111 (129)
                      |...+.|..|++.|++++      +|.|..|++.|..
T Consensus        88 F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             ESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             cCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            999999999999887654      4778888887764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=8e-25  Score=135.62  Aligned_cols=112  Identities=25%  Similarity=0.424  Sum_probs=61.6

Q ss_pred             Ccccc--cccccccCCcHHHHHHHHhhhcccCCCCCcccCc--cccccccCchhhHHHHHh-hcccccCCCCcccccc--
Q psy13444          2 KDVFC--YHCNLTLPSSTEALILHSKICSAVNRPDNKLKCY--HCKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVC--   74 (129)
Q Consensus         2 k~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~--~c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c--   74 (129)
                      ++|.|  ..|++.|.. ...|..|+.+|.    ++++|.|.  .|++.|.+.. .|..|+. .+.     ....+|.|  
T Consensus        41 ~~~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~~h~-----~~~~~~~C~~  109 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTS-LHHLTRHSLTHT----GEKNFTCDSDGCDLRFTTKA-NMKKHFNRFHN-----IKICVYVCHF  109 (190)
T ss_dssp             CSSCCSSTTCCCCCSS-HHHHHHHHTTTT----TCCCEECCSSSCCCEESCHH-HHHHHHHTTSS-----TTTSCCEECS
T ss_pred             CCccCCCCCCChhhCC-HHHHHHHHHHcc----CCCceeCCCCCCCCccCCHH-HHHHHHHHhcC-----CCcceeeCCC
Confidence            34444  444444444 444444444444    44444444  4555554444 4444442 210     12234666  


Q ss_pred             CCCCCcCCChhhHHHHhhhccCCCcccCCC--CCccccCchhHHHHHHhhhc
Q psy13444         75 CLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        75 ~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~  124 (129)
                      ..|++.|.....|..|+++|++++||.|..  |++.|...+.|..|+++|+|
T Consensus       110 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          110 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             SSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            666666666666666666666666666655  66666666666666666655

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=1.1e-24  Score=134.94  Aligned_cols=117  Identities=22%  Similarity=0.369  Sum_probs=106.5

Q ss_pred             CCcccc--cccccccCCcHHHHHHHHhhhcccCCCCCcccC--ccccccccCchhhHHHHHhhcccccCCCCccccccC-
Q psy13444          1 MKDVFC--YHCNLTLPSSTEALILHSKICSAVNRPDNKLKC--YHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCC-   75 (129)
Q Consensus         1 ~k~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c--~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~-   75 (129)
                      +++|.|  +.|++.|.. ...|..|+..|.    ++++|.|  ..|++.|.+.. .|..|++.      +....+|.|. 
T Consensus        10 ~~~~~C~~~~C~~~f~~-~~~L~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~   77 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNK-NWKLQAHLCKHT----GEKPFPCKEEGCEKGFTSLH-HLTRHSLT------HTGEKNFTCDS   77 (190)
T ss_dssp             CCCCBCSSTTTCCBCSS-HHHHHHHHHHHH----CCCSSCCSSTTCCCCCSSHH-HHHHHHTT------TTTCCCEECCS
T ss_pred             CcceeCCCCCCcchhCC-HHHHHHHHHhcC----CCCCccCCCCCCChhhCCHH-HHHHHHHH------ccCCCceeCCC
Confidence            478999  689999999 999999999999    8999999  88999999998 99999987      3445679999 


Q ss_pred             -CCCCcCCChhhHHHHh-hhc-cCCCcccC--CCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         76 -LCDYNVNGRTDMKRHL-QTH-TGEKPYKC--SHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        76 -~c~~~~~~~~~l~~h~-~~h-~~~k~~~c--~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                       .|++.|.....|..|+ +.| .++++|.|  ..|++.|...+.|..|+++|++++||.
T Consensus        78 ~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~  136 (190)
T 1tf6_A           78 DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYE  136 (190)
T ss_dssp             SSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSB
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCcc
Confidence             8999999999999999 777 57889999  889999999999999999999999984

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.4e-24  Score=130.44  Aligned_cols=116  Identities=25%  Similarity=0.421  Sum_probs=74.4

Q ss_pred             CCcccccccccccCCcHHHHHHHHh---hhcccCCCCCcccCcc-----ccccccCchhhHHHHHhhcccccCCCCcccc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSK---ICSAVNRPDNKLKCYH-----CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNY   72 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~---~~~~~~~~~~~~~c~~-----c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~   72 (129)
                      |.+|.|+.|++.|.. ...|..|+.   +|.    ++++|.|+.     |++.|.+.. .|..|++.+.      ...+|
T Consensus         1 E~~~~C~~C~~~f~~-~~~L~~H~~~~h~h~----~~~~~~C~~c~C~~c~~~f~~~~-~l~~H~~~h~------~~~~~   68 (155)
T 2gli_A            1 ETDCRWDGCSQEFDS-QEQLVHHINSEHIHG----ERKEFVCHWGGCSRELRPFKAQY-MLVVHMRRHT------GEKPH   68 (155)
T ss_dssp             CCBCCBTTCCCBCSC-HHHHHHHHHHHTSSS----CSSCCCCCBTTCTTTTCCCSSHH-HHHHHTHHHH------CCCCC
T ss_pred             CCcCCcCCCccccCC-HHHHHHHHHhhccCC----CCcceeCCCCCccchhhhhhhHH-HHHHHHHhcC------CCCCc
Confidence            446677777777777 677777766   344    566666653     236676666 6777766532      22356


Q ss_pred             ccCC--CCCcCCChhhHHHHhhhccCCCcccCCC--CCccccCchhHHHHH-HhhhcccCC
Q psy13444         73 VCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHM-RIKHKIVGK  128 (129)
Q Consensus        73 ~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~~--C~k~f~~~~~l~~h~-~~~~~~~~~  128 (129)
                      .|+.  |++.|.....|..|++.|.+++||.|..  |++.|...+.|..|+ ++|.+++||
T Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~  129 (155)
T 2gli_A           69 KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY  129 (155)
T ss_dssp             CCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCE
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCe
Confidence            6653  6666666666666666666666666666  666666666666666 566666654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=7e-26  Score=133.19  Aligned_cols=89  Identities=21%  Similarity=0.320  Sum_probs=83.6

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRS  112 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~  112 (129)
                      |+++|.|++|++.|.... .|..|++.+      ....+|.|+.|++.|.....|..|+++|++++||.|..||+.|...
T Consensus        19 Gek~y~C~~C~k~F~~~~-~L~~H~~~H------~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLT-SLRRHFNIH------SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             TEEEEEETTTCCEESCHH-HHHHHHHHH------HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             CCcCeECCCCCCCcCCHH-HHHHHHHHc------CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            899999999999999998 999999974      3456899999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhhcccCC
Q psy13444        113 HDLKRHMRIKHKIVGK  128 (129)
Q Consensus       113 ~~l~~h~~~~~~~~~~  128 (129)
                      +.|..|+++|++++|+
T Consensus        92 ~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHHHHHTCCCTT
T ss_pred             HHHHHHhHHhcCCCCC
Confidence            9999999999998774

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.2e-24  Score=130.75  Aligned_cols=112  Identities=24%  Similarity=0.459  Sum_probs=101.2

Q ss_pred             CCcccccc-----cccccCCcHHHHHHHHhhhcccCCCCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccc
Q psy13444          1 MKDVFCYH-----CNLTLPSSTEALILHSKICSAVNRPDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYV   73 (129)
Q Consensus         1 ~k~~~c~~-----c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~   73 (129)
                      +++|+|..     |++.|.. ...|..|+..|.    ++++|.|+.  |++.|.+.. .|..|++.      +....+|.
T Consensus        32 ~~~~~C~~c~C~~c~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~------h~~~~~~~   99 (155)
T 2gli_A           32 RKEFVCHWGGCSRELRPFKA-QYMLVVHMRRHT----GEKPHKCTFEGCRKSYSRLE-NLKTHLRS------HTGEKPYM   99 (155)
T ss_dssp             SSCCCCCBTTCTTTTCCCSS-HHHHHHHTHHHH----CCCCCCCCSTTCCCCCSSHH-HHHHHHHH------TTTCCCEE
T ss_pred             CcceeCCCCCccchhhhhhh-HHHHHHHHHhcC----CCCCccCCCCCCCCcccCHH-HHHHHHHH------cCCCCCee
Confidence            36788764     3489999 999999999999    899999985  999999998 99999997      44556899


Q ss_pred             cCC--CCCcCCChhhHHHHh-hhccCCCcccCCC--CCccccCchhHHHHHHhhhc
Q psy13444         74 CCL--CDYNVNGRTDMKRHL-QTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        74 c~~--c~~~~~~~~~l~~h~-~~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |+.  |++.|.....|..|+ +.|.+++||.|..  |++.|...+.|..|+++|+|
T Consensus       100 C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          100 CEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            998  999999999999999 8999999999988  99999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.89  E-value=1e-22  Score=115.23  Aligned_cols=90  Identities=24%  Similarity=0.543  Sum_probs=81.5

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRS  112 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~  112 (129)
                      .+++|.|..|++.|.... .|..|++.+      ....+|.|..|++.|.....|..|++.|.++++|.|..|++.|...
T Consensus        14 ~~~~~~C~~C~~~f~~~~-~l~~H~~~h------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   86 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSY-NLLIHERTH------TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS   86 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHH-HHHHHHHHH------CCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSH
T ss_pred             CCcCeECCCCCCccCCHH-HHHHHHHHc------CCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCH
Confidence            577899999999999998 999999873      3445799999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhhcccCCC
Q psy13444        113 HDLKRHMRIKHKIVGKS  129 (129)
Q Consensus       113 ~~l~~h~~~~~~~~~~~  129 (129)
                      ..|..|+++|++++||.
T Consensus        87 ~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           87 RTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHHHhCCCCCCc
Confidence            99999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.7e-22  Score=111.54  Aligned_cols=90  Identities=29%  Similarity=0.552  Sum_probs=80.2

Q ss_pred             CCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccC
Q psy13444         32 RPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLR  111 (129)
Q Consensus        32 ~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~  111 (129)
                      .++++|.|..|++.|.... .|..|++.      +....+|.|..|++.|.....|..|++.|.++++|.|..|++.|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   76 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKD-KLKTHMRC------HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN   76 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHH-HHHHHGGG------CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESS
T ss_pred             CCCcCeECCCCCCccCCHH-HHHHHHHh------cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            3788999999999999988 99999987      3445679999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHhhhcccCC
Q psy13444        112 SHDLKRHMRIKHKIVGK  128 (129)
Q Consensus       112 ~~~l~~h~~~~~~~~~~  128 (129)
                      .+.|..|+++|+++++.
T Consensus        77 ~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           77 SSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHHHhcCCCCC
Confidence            99999999999998753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.86  E-value=2.6e-22  Score=110.29  Aligned_cols=87  Identities=31%  Similarity=0.581  Sum_probs=69.1

Q ss_pred             CCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccC
Q psy13444         34 DNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLR  111 (129)
Q Consensus        34 ~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~  111 (129)
                      +++|.|+  .|++.|.... .|..|++.+.      ...+|.|..|++.|.....|..|++.|.+++||.|..|++.|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSG-SLTRHIRIHT------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSCCCEESSHH-HHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CCceECCCCCCCCccCCHH-HHHHHHHHhC------CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence            5678887  5888888877 8888887632      33468888888888888888889888889999999999999999


Q ss_pred             chhHHHHHHhhhcccC
Q psy13444        112 SHDLKRHMRIKHKIVG  127 (129)
Q Consensus       112 ~~~l~~h~~~~~~~~~  127 (129)
                      .+.|..|+++|+|+++
T Consensus        75 ~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           75 SDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHHHGGGGC---
T ss_pred             HHHHHHHHHHhcccCC
Confidence            9999999999988763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.8e-22  Score=113.67  Aligned_cols=87  Identities=21%  Similarity=0.286  Sum_probs=79.5

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRS  112 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~  112 (129)
                      ++++|.|.+|++.|.... .|..|++.+.        .+|.|.+|++.|.....|..|+. |.+++||.|..|++.|...
T Consensus        13 ~~~~~~C~~C~~~f~~~~-~l~~H~~~H~--------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLL-EQGSHERLCR--------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHH-HHHHHHHHHH--------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             CCcCeECCCCCCccCCHH-HHHHHHHHCC--------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            889999999999999998 9999998743        36899999999999999999996 9999999999999999999


Q ss_pred             hhHHHHHH-hhhcccCCC
Q psy13444        113 HDLKRHMR-IKHKIVGKS  129 (129)
Q Consensus       113 ~~l~~h~~-~~~~~~~~~  129 (129)
                      +.|..|++ +|.+++||.
T Consensus        83 ~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCC
Confidence            99999997 888988874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=4.9e-21  Score=108.24  Aligned_cols=90  Identities=16%  Similarity=0.312  Sum_probs=83.0

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|.|..|++.|.. ...|..|+..|.    ++++|.|..|++.|.... .|..|++.      +....+|.|.+|++.
T Consensus        15 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~   82 (106)
T 2ee8_A           15 KKEFICKFCGRHFTK-SYNLLIHERTHT----DERPYTCDICHKAFRRQD-HLRDHRYI------HSKEKPFKCQECGKG   82 (106)
T ss_dssp             CCCCBCSSSCCBCSS-HHHHHHHHHHHC----CSCCCBCSSSCCBCSCHH-HHHHHGGG------SCCCCTTSCSSSCCC
T ss_pred             CcCeECCCCCCccCC-HHHHHHHHHHcC----CCCCcCCCCccchhCCHH-HHHHHHHH------hCCCCCeECCCcCCc
Confidence            478999999999999 999999999998    889999999999999998 99999987      445567999999999


Q ss_pred             CCChhhHHHHhhhccCCCcccC
Q psy13444         81 VNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        81 ~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      |.....|..|+++|.+++||..
T Consensus        83 f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           83 FCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CSSHHHHHHHHHHTTSCCCCCC
T ss_pred             ccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999999999999999864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=1.8e-22  Score=115.76  Aligned_cols=101  Identities=16%  Similarity=0.175  Sum_probs=85.7

Q ss_pred             HHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcC--CChhhHHHHhhhcc
Q psy13444         18 EALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNV--NGRTDMKRHLQTHT   95 (129)
Q Consensus        18 ~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~--~~~~~l~~h~~~h~   95 (129)
                      ..|..|+++|.    ++++|.|..|++.|.... .|..|++..+.   ......+.|..|++.|  .....|..|+++|+
T Consensus         5 ~~l~~H~~~H~----~~~~~~C~~C~k~f~~~~-~L~~H~~~~~h---~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~   76 (115)
T 2dmi_A            5 SSGKLYGSIFT----GASKFRCKDCSAAYDTLV-ELTVHMNETGH---YRDDNHETDNNNPKRWSKPRKRSLLEMEGKED   76 (115)
T ss_dssp             CCCCCCCCCCC----CCCSEEBSSSSCEESSHH-HHHHHHHHTCC---CBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred             hhhhhheeeeC----CCCCEECCccCchhcCHH-HHHHHHHHhCc---cccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence            34667788887    899999999999999998 99999986111   1222235699999998  88999999999999


Q ss_pred             CCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         96 GEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        96 ~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +++||.|..|++.|...+.|..|+++|+...
T Consensus        77 ~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999987654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.84  E-value=1.6e-21  Score=105.34  Aligned_cols=82  Identities=32%  Similarity=0.537  Sum_probs=64.4

Q ss_pred             cccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhH
Q psy13444         36 KLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDL  115 (129)
Q Consensus        36 ~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l  115 (129)
                      ||.|..|++.|.... .|..|++.+.      ...+|.|..|++.|.....|..|++.|.++++|.|..|++.|...+.|
T Consensus         1 ~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKICGKSFKRSS-TLSTHLLIHS------DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSSCCEESSHH-HHHHHHHHHH------TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCCcccccCch-hHHHHHHHcC------CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            466777777777776 7777777532      234678888888888888888888888888889999999999999999


Q ss_pred             HHHHHhhhc
Q psy13444        116 KRHMRIKHK  124 (129)
Q Consensus       116 ~~h~~~~~~  124 (129)
                      ..|+++|+|
T Consensus        74 ~~H~~~H~g   82 (82)
T 2kmk_A           74 ITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhCC
Confidence            999988875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=1.3e-21  Score=99.66  Aligned_cols=57  Identities=21%  Similarity=0.572  Sum_probs=54.3

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|.+|++.|...+.|..|+++|+|++||.|.+||+.|...+.|..|+++|+|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            579999999999999999999999999999999999999999999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.1e-20  Score=103.81  Aligned_cols=88  Identities=22%  Similarity=0.388  Sum_probs=80.9

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|+|..|++.|.. ...|..|+..|.    ++++|.|+.|++.|.... .|..|++.      +....+|.|..|++.
T Consensus         6 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~   73 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSR-KDKLKTHMRCHT----GVKPYKCKTCDYAAADSS-SLNKHLRI------HSDERPFKCQICPYA   73 (96)
T ss_dssp             CCCCCBTTTTBCCCC-HHHHHHHGGGCC----CCCSEECSSSCCEESSHH-HHHHHHHH------SCCCCCEECSSSSCE
T ss_pred             CcCeECCCCCCccCC-HHHHHHHHHhcC----CCCCEeCCCCCCccCCHH-HHHHHHHH------hCCCCCccCCCCCCc
Confidence            579999999999999 999999999998    889999999999999998 99999997      345567999999999


Q ss_pred             CCChhhHHHHhhhccCCCcc
Q psy13444         81 VNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        81 ~~~~~~l~~h~~~h~~~k~~  100 (129)
                      |.....|..|+++|+++++.
T Consensus        74 f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           74 SRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             ESSHHHHHHHHTTCCSCCCC
T ss_pred             cCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999998753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=3.9e-21  Score=110.64  Aligned_cols=90  Identities=30%  Similarity=0.489  Sum_probs=82.8

Q ss_pred             CCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccccC--CCCCcCCChhhHHHHhhhccCCCcccCCCCCcc
Q psy13444         33 PDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYE  108 (129)
Q Consensus        33 ~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~  108 (129)
                      ++++|.|..  |++.|.+.. .|..|++.+.      ...+|.|+  .|++.|.....|..|++.|.++++|.|..|++.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   75 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLS-HLQMHSRKHT------GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK   75 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHH-HHHHHHHHHH------TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             CCeeeeCCCCCCcchhCCHH-HHHHHHHhhC------CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch
Confidence            788999987  999999998 9999999743      34579999  799999999999999999999999999999999


Q ss_pred             ccCchhHHHHHHhhhcccCCC
Q psy13444        109 TLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus       109 f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |...+.|..|+++|++++||.
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~   96 (119)
T 2jp9_A           76 FSRSDHLKTHTRTHTGEKPFS   96 (119)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEE
T ss_pred             hCCHHHHHHHHHHhcCCCCee
Confidence            999999999999999999873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=3.2e-20  Score=102.87  Aligned_cols=86  Identities=23%  Similarity=0.529  Sum_probs=75.6

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCC--CcccCCCCCcccc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE--KPYKCSHCGYETL  110 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~--k~~~c~~C~k~f~  110 (129)
                      ++++|.|..|++.|.... .|..|++.      +....+|.|..|++.|.....|..|++.|.++  ++|.|..|++.|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVY-HLNRHKLS------HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCSCEECSSSCCEESSSH-HHHHHHHH------SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCeECCCCCCccCChH-HHHHHHHh------cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            788999999999999998 99999987      33456799999999999999999999999887  8999999999999


Q ss_pred             CchhHHHHHH-hhhcc
Q psy13444        111 RSHDLKRHMR-IKHKI  125 (129)
Q Consensus       111 ~~~~l~~h~~-~~~~~  125 (129)
                      ..+.|..|++ +|.++
T Consensus        77 ~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           77 RPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SHHHHHHHHHHTSCCC
T ss_pred             CHHHHHHHHHHhcCCC
Confidence            9999999987 56554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.5e-20  Score=107.85  Aligned_cols=90  Identities=20%  Similarity=0.324  Sum_probs=82.3

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhh---ccCCCcccCCCCCccc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQT---HTGEKPYKCSHCGYET  109 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~---h~~~k~~~c~~C~k~f  109 (129)
                      ++++|.|+.|++.|.+.. .|..|++.+      ....+|.|+.|++.|.....|..|+..   +.++++|.|..|++.|
T Consensus         4 ~~~~~~C~~C~~~f~~~~-~l~~H~~~h------~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f   76 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKY-YLKVHNRKH------TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF   76 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHH-HHHHHHHHH------SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE
T ss_pred             CCCCCCCCCCCCcCCCHH-HHHHHHHhC------CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc
Confidence            788999999999999998 999999874      344679999999999999999999995   6788999999999999


Q ss_pred             cCchhHHHHHHhhhcccCCC
Q psy13444        110 LRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus       110 ~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .....|..|+++|++++||.
T Consensus        77 ~~~~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           77 RRRMELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             SSHHHHHHHHHHHSSSCSEE
T ss_pred             CCHHHHHHHHHHcCCCCCcc
Confidence            99999999999999999873

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.5e-20  Score=106.89  Aligned_cols=85  Identities=22%  Similarity=0.425  Sum_probs=76.0

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRS  112 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~  112 (129)
                      ++++|.| .|++.|.... .|..|++.+      ....+|.|..|++.|.....|..|+++|.++++|.|..|++.|...
T Consensus         7 ~~k~~~C-~C~~~f~~~~-~l~~H~~~h------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKS-QRDRHMSMH------LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCEEC-TTSCEESSHH-HHHHHHHHH------SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCEec-cCCCccCCHH-HHHHHHHHc------CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            7899999 8999999988 999999873      3345799999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhhcc
Q psy13444        113 HDLKRHMRIKHKI  125 (129)
Q Consensus       113 ~~l~~h~~~~~~~  125 (129)
                      +.|..|+++|+..
T Consensus        79 ~~l~~H~~~~~~~   91 (110)
T 2csh_A           79 DSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccc
Confidence            9999999988764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=1.6e-20  Score=103.05  Aligned_cols=87  Identities=22%  Similarity=0.414  Sum_probs=76.9

Q ss_pred             CCccccc--ccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCC
Q psy13444          1 MKDVFCY--HCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCD   78 (129)
Q Consensus         1 ~k~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~   78 (129)
                      ++||.|+  .|++.|.. ...|..|+..|.    ++++|.|..|++.|.... .|..|++.+.      ...+|.|..|+
T Consensus         2 ~k~~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~   69 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQ-SGSLTRHIRIHT----GQKPFQCRICMRNFSRSD-HLTTHIRTHT------GEKPFACDICG   69 (90)
T ss_dssp             -CCEECCSSSCCCEESS-HHHHHHHHHHHH----CCCCEECTTTCCEESCHH-HHHHHHHHHH------CCCCEECTTTC
T ss_pred             CCceECCCCCCCCccCC-HHHHHHHHHHhC----CCCCccCCCCCcccCCHH-HHHHHHHHcC------CCCCccCCCCC
Confidence            5899998  69999999 999999999998    899999999999999998 9999998743      34579999999


Q ss_pred             CcCCChhhHHHHhhhccCCCc
Q psy13444         79 YNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        79 ~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      +.|.....|..|+++|+++++
T Consensus        70 ~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           70 RKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             CEESSHHHHHHHHGGGGC---
T ss_pred             chhCCHHHHHHHHHHhcccCC
Confidence            999999999999999998763

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.80  E-value=9.1e-20  Score=105.64  Aligned_cols=89  Identities=25%  Similarity=0.466  Sum_probs=79.9

Q ss_pred             CCCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC--CCcc
Q psy13444         33 PDNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYE  108 (129)
Q Consensus        33 ~~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~--C~k~  108 (129)
                      .+++|.|+  .|++.|.+.. .|..|++.+       ...+|.|..|++.|.....|..|++.|.++++|.|..  |++.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h-------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   73 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNS-AMRKHLHTH-------GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR   73 (124)
T ss_dssp             ---CEECCSTTCCCEESSHH-HHHHHHGGG-------SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCE
T ss_pred             CCCcccCCCCCCcCccCCHH-HHHHHHHHc-------CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCc
Confidence            45789999  8999999998 999999874       3357999999999999999999999999999999986  9999


Q ss_pred             ccCchhHHHHHHhhhcccCCC
Q psy13444        109 TLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus       109 f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |...+.|..|+++|++++||.
T Consensus        74 f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           74 FSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             ESCHHHHHHHHHHHHCCCCCC
T ss_pred             cCCHHHHHHHHHHhCCCCceE
Confidence            999999999999999999884

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=8.2e-20  Score=98.54  Aligned_cols=82  Identities=20%  Similarity=0.333  Sum_probs=75.0

Q ss_pred             cccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCC
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVN   82 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~   82 (129)
                      ||.|..|++.|.. ...|..|+..|.    ++++|.|+.|++.|.... .|..|++.+.      ...+|.|..|++.|.
T Consensus         1 ~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f~   68 (82)
T 2kmk_A            1 SFDCKICGKSFKR-SSTLSTHLLIHS----DTRPYPCQYCGKRFHQKS-DMKKHTFIHT------GEKPHKCQVCGKAFS   68 (82)
T ss_dssp             CEECSSSCCEESS-HHHHHHHHHHHH----TCCCEECSSSCCEESSHH-HHHHHHHHHH------TCCCEECTTTSCEES
T ss_pred             CccCCCCcccccC-chhHHHHHHHcC----CCCCeeCCcCChhhCCHH-HHHHHHHHhc------CCCCCcCCCcchhhC
Confidence            6899999999999 999999999998    899999999999999998 9999998743      345799999999999


Q ss_pred             ChhhHHHHhhhccC
Q psy13444         83 GRTDMKRHLQTHTG   96 (129)
Q Consensus        83 ~~~~l~~h~~~h~~   96 (129)
                      ....|..|+++|+|
T Consensus        69 ~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           69 QSSNLITHSRKHTG   82 (82)
T ss_dssp             SHHHHHHHHHHHC-
T ss_pred             ChHHHHHHHHhhCC
Confidence            99999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2e-19  Score=101.85  Aligned_cols=88  Identities=20%  Similarity=0.220  Sum_probs=79.5

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|+|..|++.|.. ...|..|+.+|.      ++|.|.+|++.|.... .|..|+. +      ....+|.|.+|++.
T Consensus        14 ~~~~~C~~C~~~f~~-~~~l~~H~~~H~------~~~~C~~C~~~f~~~~-~l~~H~~-H------~~~~~~~C~~C~~~   78 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSS-LLEQGSHERLCR------NAAVCPYCSLRFFSPE-LKQEHES-K------CEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCBCTTTCCBCSS-HHHHHHHHHHHH------HSBCCTTTCCCBSSHH-HHHHHHH-H------CSTGGGEEGGGTEE
T ss_pred             CcCeECCCCCCccCC-HHHHHHHHHHCC------CCccCCCCCCccCCHH-HHHHHHH-c------CCCCCccCccccch
Confidence            578999999999999 999999999985      5899999999999998 9999995 2      34568999999999


Q ss_pred             CCChhhHHHHhh-hccCCCcccCC
Q psy13444         81 VNGRTDMKRHLQ-THTGEKPYKCS  103 (129)
Q Consensus        81 ~~~~~~l~~h~~-~h~~~k~~~c~  103 (129)
                      |.....|..|++ +|.++++|.+.
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999997 89999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.78  E-value=3.9e-19  Score=106.69  Aligned_cols=88  Identities=22%  Similarity=0.431  Sum_probs=81.9

Q ss_pred             ccccccccccCCcHHHHHHHHhhhcccCCCCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccccCC--CCC
Q psy13444          4 VFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL--CDY   79 (129)
Q Consensus         4 ~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~--c~~   79 (129)
                      |.|..|++.|.. ...|..|+.+|.    ++++|.|..  |++.|.... .|..|++.      +....+|.|..  |++
T Consensus        63 ~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~L~~H~~~------h~~~~~~~C~~~~C~k  130 (155)
T 2rpc_A           63 EECPREGKSFKA-KYKLVNHIRVHT----GEKPFPCPFPGCGKIFARSE-NLKIHKRT------HTGEKPFKCEFEGCDR  130 (155)
T ss_dssp             TTCTTSSCCCSS-HHHHHHHTHHHH----CCCSEECSCTTTCCEESCHH-HHHHHHTT------TCSSCSBCCSSTTCCC
T ss_pred             cCCCCcccccCC-HHHHHHHHHhcC----CCCcccCCcCCCCCccCCHH-HHHHHHHh------hCCCCCccCCCCCCCC
Confidence            899999999999 999999999999    899999998  999999998 99999987      44556899997  999


Q ss_pred             cCCChhhHHHHhhhccCCCcccCC
Q psy13444         80 NVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        80 ~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      .|.....|..|+++|++++||.|.
T Consensus       131 ~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          131 RFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999886

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=4.4e-19  Score=98.24  Aligned_cols=88  Identities=18%  Similarity=0.337  Sum_probs=77.9

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|.|..|++.|.. ...|..|+.+|.    ++++|.|+.|++.|.... .|..|++.+..    ....+|.|..|++.
T Consensus         5 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h~~----~~~~~~~C~~C~~~   74 (95)
T 2yt9_A            5 SSGVACEICGKIFRD-VYHLNRHKLSHS----GEKPYSCPVCGLRFKRKD-RMSYHVRSHDG----SVGKPYICQSCGKG   74 (95)
T ss_dssp             CSCEECSSSCCEESS-SHHHHHHHHHSC----SSCSEECSSSCCEESCHH-HHHHHHHHHCC----CCCSSBCCSSSCCC
T ss_pred             CCCeECCCCCCccCC-hHHHHHHHHhcC----CCCCCcCCCCCCccCCHH-HHHHHHHHhcC----CCCCceECCCccch
Confidence            578999999999999 899999999998    899999999999999998 99999997532    12367999999999


Q ss_pred             CCChhhHHHHhh-hccCCC
Q psy13444         81 VNGRTDMKRHLQ-THTGEK   98 (129)
Q Consensus        81 ~~~~~~l~~h~~-~h~~~k   98 (129)
                      |.....|..|++ .|.++.
T Consensus        75 f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           75 FSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             BSSHHHHHHHHHHTSCCCS
T ss_pred             hCCHHHHHHHHHHhcCCCC
Confidence            999999999986 787753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=6.7e-19  Score=98.33  Aligned_cols=85  Identities=29%  Similarity=0.551  Sum_probs=75.2

Q ss_pred             CCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccccC--CCCCcCCChhhHHHHhhhccCCCcccCCCCCcc
Q psy13444         33 PDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYE  108 (129)
Q Consensus        33 ~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~  108 (129)
                      ..++|.|..  |++.|.... .|..|++.+      ....+|.|.  .|++.|.....|..|++.|.++++|.|..|++.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h------~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   84 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSS-HLKAHLRTH------TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRS   84 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHH-HHHHHHHHH------SCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCB
T ss_pred             cCcceEcCCCCCCCcccCHH-HHHHHHHHh------CCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCc
Confidence            456788986  999999998 999999873      344578996  699999999999999999999999999999999


Q ss_pred             ccCchhHHHHHHhhhc
Q psy13444        109 TLRSHDLKRHMRIKHK  124 (129)
Q Consensus       109 f~~~~~l~~h~~~~~~  124 (129)
                      |...+.|..|+++|++
T Consensus        85 f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           85 FSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CSSHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhCC
Confidence            9999999999999865

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.77  E-value=5.2e-19  Score=96.79  Aligned_cols=83  Identities=27%  Similarity=0.533  Sum_probs=71.3

Q ss_pred             CCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccccC--CCCCcCCChhhHHHHhhhccCCCcccCCCCCcc
Q psy13444         33 PDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYE  108 (129)
Q Consensus        33 ~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~  108 (129)
                      ...+|.|..  |++.|.... .|..|++.      +....+|.|+  .|++.|.....|..|++.|.++++|.|..|++.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSS-HLKAHLRT------HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHH-HHHHHHTT------SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCCeeCCCCCCCCcCCCHH-HHHHHHHh------cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            356788888  999998887 89999886      3345578896  599999999999999999999999999999999


Q ss_pred             ccCchhHHHHHHhh
Q psy13444        109 TLRSHDLKRHMRIK  122 (129)
Q Consensus       109 f~~~~~l~~h~~~~  122 (129)
                      |...+.|..|+++|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            99999999999887

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.6e-18  Score=97.58  Aligned_cols=83  Identities=18%  Similarity=0.247  Sum_probs=76.2

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      +++|+| .|++.|.. ...|..|+..|.    ++++|.|..|++.|.... .|..|++.      +....+|.|..|++.
T Consensus         8 ~k~~~C-~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~   74 (110)
T 2csh_A            8 DKLYPC-QCGKSFTH-KSQRDRHMSMHL----GLRPYGCGVCGKKFKMKH-HLVGHMKI------HTGIKPYECNICAKR   74 (110)
T ss_dssp             CCCEEC-TTSCEESS-HHHHHHHHHHHS----CCCSEECTTTSCEESSSH-HHHHHHTT------TCCCCCEECSSSCCE
T ss_pred             CCCEec-cCCCccCC-HHHHHHHHHHcC----CCcCccCCCCCcccCCHH-HHHHHHHH------cCCCCCeeCCCCcch
Confidence            579999 99999999 999999999998    889999999999999998 99999987      344567999999999


Q ss_pred             CCChhhHHHHhhhccC
Q psy13444         81 VNGRTDMKRHLQTHTG   96 (129)
Q Consensus        81 ~~~~~~l~~h~~~h~~   96 (129)
                      |.....|..|++.|..
T Consensus        75 f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           75 FMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             ESCHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHccc
Confidence            9999999999998864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=2.5e-18  Score=91.17  Aligned_cols=62  Identities=32%  Similarity=0.570  Sum_probs=58.6

Q ss_pred             CCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         67 GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        67 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      ....+|.|..|++.|.....|..|++.|.++++|.|..|++.|...+.|..|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34567999999999999999999999999999999999999999999999999999999997

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.8e-18  Score=87.93  Aligned_cols=54  Identities=17%  Similarity=0.319  Sum_probs=43.0

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKC   60 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c   60 (129)
                      ||||+|.+|++.|.. ...|..|+++|.    +++||.|.+||+.|.... .|..|++++
T Consensus         2 EKpy~C~~C~k~F~~-~~~L~~H~~~Ht----~ekp~~C~~C~k~F~~~~-~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRD-ASGLSRHRRAHL----GYRPRSCPECGKCFRDQS-EVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTTCCEESS-HHHHHHHHHHHH----TCCCEECTTTCCEESSHH-HHHHHGGGG
T ss_pred             CCCccCCCCCCEeCC-HHHHHHHHHHhC----CCcCeECCCCCCCcCCHH-HHHHHhCcc
Confidence            678888888888888 788888888887    788888888888888777 777777764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=5.3e-18  Score=90.51  Aligned_cols=62  Identities=34%  Similarity=0.636  Sum_probs=57.1

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      ...+|.|.+|++.|.....|..|+++|.+++||.|..|++.|...+.|..|+++|++++||+
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            44679999999999999999999999999999999999999999999999999999999985

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=5e-18  Score=97.12  Aligned_cols=91  Identities=13%  Similarity=0.155  Sum_probs=76.9

Q ss_pred             CCcccccccccccCCcHHHHHHHHhh--hcccCCCCCcc-cCccccccc--cCchhhHHHHHhhcccccCCCCccccccC
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKI--CSAVNRPDNKL-KCYHCKQVL--SSSMDDLLFHSRKCAVVWRPGKSFNYVCC   75 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~--~~~~~~~~~~~-~c~~c~~~f--~~~~~~l~~h~~~c~~~~~~~~~~~~~c~   75 (129)
                      ++||+|..|++.|.. ...|..|+..  |.    +++++ .|..|++.|  .... .|..|++.      +....+|.|.
T Consensus        17 ~~~~~C~~C~k~f~~-~~~L~~H~~~~~h~----~~~~~~~C~~C~~~f~f~~~~-~l~~H~~~------H~~~~~~~C~   84 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDT-LVELTVHMNETGHY----RDDNHETDNNNPKRWSKPRKR-SLLEMEGK------EDAQKVLKCM   84 (115)
T ss_dssp             CCSEEBSSSSCEESS-HHHHHHHHHHTCCC----BCSCCCCCCCCCSCCSSCCCC-CCCCCCCS------CCCCSSCBCS
T ss_pred             CCCEECCccCchhcC-HHHHHHHHHHhCcc----ccCCCccCCCCCcccccccHH-HHHHHhhc------cCCCcceECC
Confidence            579999999999999 9999999998  65    55554 499999999  7777 89889886      4456789999


Q ss_pred             CCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         76 LCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        76 ~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +|++.|.....|..|++.|........+
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999999998776554443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=2.1e-17  Score=92.17  Aligned_cols=84  Identities=19%  Similarity=0.394  Sum_probs=75.6

Q ss_pred             CCcccccc--cccccCCcHHHHHHHHhhhcccCCCCCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCC
Q psy13444          1 MKDVFCYH--CNLTLPSSTEALILHSKICSAVNRPDNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL   76 (129)
Q Consensus         1 ~k~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~   76 (129)
                      +++|.|..  |++.|.. ...|..|+..|.    ++++|.|+  .|++.|.... .|..|++.+      ....+|.|..
T Consensus        13 ~~~~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h------~~~~~~~C~~   80 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTK-SSHLKAHLRTHT----GEKPYKCTWEGCDWRFARSD-ELTRHYRKH------TGAKPFQCGV   80 (100)
T ss_dssp             CCCEECCSSSCCCEESC-HHHHHHHHHHHS----CCCCEECCSSSCCCEESSHH-HHHHHHHHH------TSCCSCBCSS
T ss_pred             CcceEcCCCCCCCcccC-HHHHHHHHHHhC----CCCCeeCCCCCCCCccCCHH-HHHHHHHHh------CCCCCeECCC
Confidence            36799996  9999999 999999999998    89999996  6999999998 999999873      3456799999


Q ss_pred             CCCcCCChhhHHHHhhhccC
Q psy13444         77 CDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        77 c~~~~~~~~~l~~h~~~h~~   96 (129)
                      |++.|.....|..|+++|.+
T Consensus        81 C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           81 CNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SCCBCSSHHHHHHHHHHHCC
T ss_pred             CcCccCCHHHHHHHHHHhCC
Confidence            99999999999999999864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.5e-17  Score=86.33  Aligned_cols=62  Identities=23%  Similarity=0.607  Sum_probs=57.9

Q ss_pred             CCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         67 GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        67 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      ....+|.|..|++.|.....|..|+++|.++++|.|..|++.|...+.|..|+++|++++|.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            34567999999999999999999999999999999999999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=7.6e-18  Score=93.96  Aligned_cols=61  Identities=20%  Similarity=0.367  Sum_probs=40.2

Q ss_pred             CccccccCCCCCcCC-ChhhHHHHhhhccC-CCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         68 KSFNYVCCLCDYNVN-GRTDMKRHLQTHTG-EKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~-~~~~l~~h~~~h~~-~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      ...+|.|..|++.|. ....|..|+++|.+ +++|.|..|++.|...+.|..|+++|++++|.
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            334566666666666 66666666666666 66666666666666666666666666666653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=1e-18  Score=95.60  Aligned_cols=80  Identities=13%  Similarity=0.215  Sum_probs=47.7

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN   80 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~   80 (129)
                      ||||.|..|++.|.. ...|..|+.+|.    ++++|.|+.|++.|.... .|..|+.....       .++.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~C~k~f~~~~-~L~~H~~~h~~-------~~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSR-SDHLTTHIRTHT----GEKPFACDICGRKFARSD-ERKRHRDIQHI-------LPILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESC-HHHHHHHHHHHH----CCCCEECTTTCCEESSHH-HHHHHHHHHTH-------HHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCC-HHHHHHHHHHcC----CCCCccCCCCCCccCCHH-HHHHHHHHhCC-------CcchHHHHHHH
Confidence            466777777777776 667777776666    666666666666666665 66666654221       23455555555


Q ss_pred             CCChhhHHHHhhh
Q psy13444         81 VNGRTDMKRHLQT   93 (129)
Q Consensus        81 ~~~~~~l~~h~~~   93 (129)
                      |.....|..|++.
T Consensus        68 f~~~~~L~~H~~~   80 (88)
T 1llm_C           68 LSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHH
Confidence            5555555555443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.8e-17  Score=87.99  Aligned_cols=71  Identities=20%  Similarity=0.445  Sum_probs=61.3

Q ss_pred             CCCcccCcc--ccccccCchhhHHHHHh-hcccccCCCCccccccCC--CCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         33 PDNKLKCYH--CKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        33 ~~~~~~c~~--c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      ++++|.|..  |++.|.... .|..|++ .+      ....+|.|..  |++.|.....|..|+++|++++||.|..|++
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~-~L~~H~~~~H------~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQ-YLNHHKKYQH------IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHH-HHHHHHHHGG------GSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC
T ss_pred             CCCCccCCCCCCcCccCCHH-HHHHHHHHHh------CCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            678888876  999999988 9999998 43      2445799998  9999999999999999999999999999999


Q ss_pred             ccc
Q psy13444        108 ETL  110 (129)
Q Consensus       108 ~f~  110 (129)
                      .|.
T Consensus        77 ~F~   79 (79)
T 2dlk_A           77 SSG   79 (79)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            884

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=3.1e-17  Score=89.65  Aligned_cols=82  Identities=21%  Similarity=0.353  Sum_probs=74.1

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhcccCCCCCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCCC
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICSAVNRPDNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLC   77 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c   77 (129)
                      ++|.|..  |++.|.. ...|..|+..|.    ++++|.|+  .|++.|.... .|..|++.+.      ...+|.|+.|
T Consensus         4 ~~~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h~------~~~~~~C~~C   71 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTK-SSHLKAHLRTHT----GEKPYHCDWDGCGWKFARSD-ELTRHYRKHT------GHRPFQCQKC   71 (89)
T ss_dssp             CCEECCSTTTCCEESS-HHHHHHHHTTSC----SSCCEECCSTTTCCEESSHH-HHHHHHHHHH------CCCCEECSSS
T ss_pred             CCeeCCCCCCCCcCCC-HHHHHHHHHhcC----CCCCcCCCCCCCCCccCCHH-HHHHHHHHcC------CCCCccCCCC
Confidence            5799999  9999999 999999999998    89999997  6999999998 9999998743      3457999999


Q ss_pred             CCcCCChhhHHHHhhhcc
Q psy13444         78 DYNVNGRTDMKRHLQTHT   95 (129)
Q Consensus        78 ~~~~~~~~~l~~h~~~h~   95 (129)
                      ++.|.....|..|+++|.
T Consensus        72 ~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           72 DRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SCEESSHHHHHHHGGGGC
T ss_pred             CcccCCHHHHHHHHHhhC
Confidence            999999999999999873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=6.7e-19  Score=96.36  Aligned_cols=84  Identities=18%  Similarity=0.246  Sum_probs=75.5

Q ss_pred             CCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCch
Q psy13444         34 DNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSH  113 (129)
Q Consensus        34 ~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~  113 (129)
                      ++||.|..|++.|.... .|..|++.+.      ...+|.|..|++.|.....|..|++.|.+ .++.|..|++.|....
T Consensus         1 ek~~~C~~C~k~f~~~~-~L~~H~~~H~------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~   72 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSD-HLTTHIRTHT------GEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNY   72 (88)
T ss_dssp             CCCEECTTTCCEESCHH-HHHHHHHHHH------CCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHH-HHHHHHHHcC------CCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHh
Confidence            47899999999999998 9999999743      34579999999999999999999999885 7899999999999999


Q ss_pred             hHHHHHHhhhcc
Q psy13444        114 DLKRHMRIKHKI  125 (129)
Q Consensus       114 ~l~~h~~~~~~~  125 (129)
                      .|..|++.+++.
T Consensus        73 ~L~~H~~~~h~~   84 (88)
T 1llm_C           73 HLENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHH
Confidence            999999987763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.5e-17  Score=90.35  Aligned_cols=83  Identities=17%  Similarity=0.290  Sum_probs=69.5

Q ss_pred             HHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCc
Q psy13444         20 LILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        20 l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      +..|+++|.    ++++|.|..|++.|.... .|..|++.....  -....+|.|..|++.|.....|..|+++|.++++
T Consensus         3 ~~~H~~~H~----~~k~~~C~~C~~~f~~~~-~l~~H~~~~~~~--~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A            3 SGSSGRTHT----GEKPYACSHCDKTFRQKQ-LLDMHFKRYHDP--NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             TTCCSTTCC----CCCCEECSSSSCEESSHH-HHHHHHHHTTCS--SCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             cccccceec----CCCCCcCCCCCCccCCHH-HHHHHHHHhcCC--cCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            456788887    899999999999999998 999999753320  0112579999999999999999999999999999


Q ss_pred             ccCCCCCccc
Q psy13444        100 YKCSHCGYET  109 (129)
Q Consensus       100 ~~c~~C~k~f  109 (129)
                      +.|..|+..+
T Consensus        76 ~~~~~~~~~~   85 (86)
T 1x6h_A           76 VEGENSGPSS   85 (86)
T ss_dssp             CCCCCCCCCC
T ss_pred             cccCCCCCCC
Confidence            9999998765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=2.8e-17  Score=89.01  Aligned_cols=49  Identities=27%  Similarity=0.524  Sum_probs=25.1

Q ss_pred             ccccCC--CCCcCCChhhHHHHhhhccCCCcccCCC---CCccccCchhHHHHHHhh
Q psy13444         71 NYVCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSH---CGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        71 ~~~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~~---C~k~f~~~~~l~~h~~~~  122 (129)
                      +|.|+.  |++.|.....|..|+++|++   |.|..   |++.|...+.|..|+++|
T Consensus        31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           31 PYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             CeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            344444  44444444445555555444   55555   555555555555555544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.67  E-value=6.1e-17  Score=81.42  Aligned_cols=56  Identities=29%  Similarity=0.684  Sum_probs=53.4

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +|.|..|++.|.....|..|+++|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            37899999999999999999999999999999999999999999999999998875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=7.9e-18  Score=98.13  Aligned_cols=85  Identities=20%  Similarity=0.292  Sum_probs=70.1

Q ss_pred             CCCcccCcccccccc-----CchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         33 PDNKLKCYHCKQVLS-----SSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~-----~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      .++.+.|..|++.|.     .....|..|++.       ....+|.|..|++.|.....|..|+++|  ++||.|..|++
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h-------~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k  108 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS-------KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKK  108 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHH-------HHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCC
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHHHh-------CCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCc
Confidence            345677888887776     332256666652       2346799999999999999999999999  89999999999


Q ss_pred             cccCchhHHHHHHhhhccc
Q psy13444        108 ETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus       108 ~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|...+.|..|+++|+|+-
T Consensus       109 ~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          109 EFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             BCSSHHHHHHHHHHTTCCC
T ss_pred             ccCCHHHHHHHHHHHCCcc
Confidence            9999999999999999863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=7.3e-17  Score=87.50  Aligned_cols=59  Identities=19%  Similarity=0.347  Sum_probs=53.7

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHH-hhhccc
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR-IKHKIV  126 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~-~~~~~~  126 (129)
                      ...+|+|++|++.|.....|..|+++|++++||.|..|++.|...+.|.+|++ +|.+|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            44569999999999999999999999999999999999999999999999975 677654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.7e-16  Score=83.61  Aligned_cols=62  Identities=31%  Similarity=0.524  Sum_probs=56.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      +....+|.|..|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|+++.+
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            44556899999999999999999999999999999999999999999999999999998653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.66  E-value=1e-16  Score=80.57  Aligned_cols=55  Identities=36%  Similarity=0.711  Sum_probs=50.9

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      .+|.|..|++.|.....|..|+++|++++||.|..|++.|...+.|..|+++|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999999999999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.7e-17  Score=90.27  Aligned_cols=71  Identities=20%  Similarity=0.387  Sum_probs=50.6

Q ss_pred             CCCCcccCccccccccCchhhHHHHHh-hcccccCCCCccccccCCCCCcCCChhhHHHH-hhhccCCCcccCCCCC
Q psy13444         32 RPDNKLKCYHCKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRH-LQTHTGEKPYKCSHCG  106 (129)
Q Consensus        32 ~~~~~~~c~~c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~h~~~k~~~c~~C~  106 (129)
                      ++++||.|..|++.|.... .|..|++ .+..   -....+|.|..|++.|...+.|..| +++|+|++||.|..+.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~-~L~~H~r~~H~~---~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLN-MFTFHVDSEHPN---VVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHH-HHHHHHHHHCSS---CCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHH-HHHHHHHhhCCC---CCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            3677788888888888776 7888876 3311   0234567888888888888888888 7778888888777643

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=2.3e-16  Score=85.36  Aligned_cols=78  Identities=21%  Similarity=0.339  Sum_probs=71.6

Q ss_pred             cccc--cccccccCCcHHHHHHHHhhhcccCCCCCcccCcc--ccccccCchhhHHHHHhhcccccCCCCccccccCC--
Q psy13444          3 DVFC--YHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYH--CKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL--   76 (129)
Q Consensus         3 ~~~c--~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~--c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~--   76 (129)
                      ||+|  ..|++.|.. ...|..|+.+|.    ++++|.|+.  |++.|.... .|..|++.+..         |.|..  
T Consensus         1 p~~C~~~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~~~C~~~f~~~~-~l~~H~~~h~~---------~~C~~~~   65 (85)
T 2j7j_A            1 MYVCHFENCGKAFKK-HNQLKVHQFSHT----QQLPYECPHEGCDKRFSLPS-RLKRHEKVHAG---------YPCKKDD   65 (85)
T ss_dssp             CEECCSTTCCCEESS-HHHHHHHHHHHH----TTCCEECCSTTCCCEESSHH-HHHHHHHHHHS---------EECCSCS
T ss_pred             CccCCCCCCCcccCC-HHHHHHHHHHhC----CCCCeeCCCCCCcCccCCHH-HHHHHHHHhCC---------CCCCCCC
Confidence            6899  999999999 999999999999    899999988  999999998 99999987432         88999  


Q ss_pred             -CCCcCCChhhHHHHhhhcc
Q psy13444         77 -CDYNVNGRTDMKRHLQTHT   95 (129)
Q Consensus        77 -c~~~~~~~~~l~~h~~~h~   95 (129)
                       |++.|.....|..|++.|+
T Consensus        66 ~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           66 SCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCccCCHHHHHHHHHhcC
Confidence             9999999999999999874

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.1e-16  Score=87.78  Aligned_cols=75  Identities=16%  Similarity=0.250  Sum_probs=59.8

Q ss_pred             cccCchhhHHHHHhhcccccCCCCccccccCCCCCcC-CChhhHHHHhhhccCCCcccCCCCCccccCchhHHHH-HHhh
Q psy13444         45 VLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNV-NGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRH-MRIK  122 (129)
Q Consensus        45 ~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h-~~~~  122 (129)
                      .|.... .+..|++...      ...+|.|+.|++.| .....|..|+++| +++||.|..||+.|...+.|..| +++|
T Consensus        15 ~~~~~~-~~~~~~~~~~------~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           15 VYAAGS-LEEQWYLEIV------DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             SSCTTC-HHHHHHHHHH------HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCch-HHHHHHHHhc------CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            445555 6666766522      23468999999999 8999999999999 99999999999999999999999 7777


Q ss_pred             hcccCC
Q psy13444        123 HKIVGK  128 (129)
Q Consensus       123 ~~~~~~  128 (129)
                      .+ +||
T Consensus        87 ~~-~p~   91 (96)
T 2ctd_A           87 NS-LPS   91 (96)
T ss_dssp             CC-CSS
T ss_pred             CC-CCC
Confidence            65 444

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.9e-16  Score=82.80  Aligned_cols=63  Identities=29%  Similarity=0.444  Sum_probs=57.5

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccC
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      ++++|.|.+|++.|.... .|..|++.      +....+|.|.+|++.|.....|..|+++|++++||.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~-~l~~H~~~------h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSS-DLSKHRRT------HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHH-HHHHHHTT------TCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHH-HHHHHHHH------cCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            788999999999999998 99999987      4455689999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3e-16  Score=87.87  Aligned_cols=63  Identities=19%  Similarity=0.371  Sum_probs=55.9

Q ss_pred             CCccccccCCCCCcCCChhhHHHHhh-hc---cCCCcccCCCCCccccCchhHHHH-HHhhhcccCCC
Q psy13444         67 GKSFNYVCCLCDYNVNGRTDMKRHLQ-TH---TGEKPYKCSHCGYETLRSHDLKRH-MRIKHKIVGKS  129 (129)
Q Consensus        67 ~~~~~~~c~~c~~~~~~~~~l~~h~~-~h---~~~k~~~c~~C~k~f~~~~~l~~h-~~~~~~~~~~~  129 (129)
                      .+..+|.|..|++.|...+.|..|++ .|   .+++||.|..||+.|...+.|..| +++|+|++||.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            44568999999999999999999997 58   568999999999999999999999 88999999973

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.3e-16  Score=84.99  Aligned_cols=71  Identities=20%  Similarity=0.316  Sum_probs=61.8

Q ss_pred             hHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCC----CcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         52 DLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE----KPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        52 ~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~----k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      ++.+|++.      +....+|.|..|++.|.....|..|++.|.++    ++|.|..|++.|...+.|..|+++|+++++
T Consensus         2 s~~~H~~~------H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A            2 SSGSSGRT------HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             TTTCCSTT------CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             Ccccccce------ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            34456665      44567899999999999999999999887665    789999999999999999999999999988


Q ss_pred             C
Q psy13444        128 K  128 (129)
Q Consensus       128 ~  128 (129)
                      +
T Consensus        76 ~   76 (86)
T 1x6h_A           76 V   76 (86)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.3e-15  Score=77.31  Aligned_cols=55  Identities=35%  Similarity=0.682  Sum_probs=50.9

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHH-Hhhhcc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHM-RIKHKI  125 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~-~~~~~~  125 (129)
                      +|.|..|++.|.....|..|+++|++++||.|..|++.|...+.|..|+ ++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5899999999999999999999999999999999999999999999997 567664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.7e-15  Score=79.58  Aligned_cols=60  Identities=22%  Similarity=0.442  Sum_probs=55.7

Q ss_pred             cccccCC--CCCcCCChhhHHHHhh-hccCCCcccCCC--CCccccCchhHHHHHHhhhcccCCC
Q psy13444         70 FNYVCCL--CDYNVNGRTDMKRHLQ-THTGEKPYKCSH--CGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        70 ~~~~c~~--c~~~~~~~~~l~~h~~-~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .+|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|...+.|..|+++|++++||.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            4577775  9999999999999999 799999999999  9999999999999999999999984

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=3.4e-15  Score=82.43  Aligned_cols=59  Identities=17%  Similarity=0.247  Sum_probs=53.9

Q ss_pred             ccccCCCCCcCCChhhHHHHhhh-ccCCCc--------ccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQT-HTGEKP--------YKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~-h~~~k~--------~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .+.|..|++.|.....|..|++. |.++++        |.|..|++.|...+.|..|+++|++++||.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            36799999999999999999998 888887        899999999999999999999999999984

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=6.3e-16  Score=82.34  Aligned_cols=63  Identities=27%  Similarity=0.504  Sum_probs=48.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhh-hccCC-CcccCCCCCccccCchhHHHHHHhhhc-ccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQ-THTGE-KPYKCSHCGYETLRSHDLKRHMRIKHK-IVGK  128 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~-k~~~c~~C~k~f~~~~~l~~h~~~~~~-~~~~  128 (129)
                      +....+|.|..|++.|.....|..|++ .|.++ ++|.|..|++.|...+.|..|++++++ +.|.
T Consensus        10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A           10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            344567888888888888888888886 57664 788888888888888888888887655 3443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=6.1e-16  Score=86.15  Aligned_cols=77  Identities=14%  Similarity=0.229  Sum_probs=66.3

Q ss_pred             HHHHHHHHhhhcccCCCCCcccCcccccccc-CchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhcc
Q psy13444         17 TEALILHSKICSAVNRPDNKLKCYHCKQVLS-SSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHT   95 (129)
Q Consensus        17 ~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~-~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   95 (129)
                      ...+..|+++|.    ++++|.|..|++.|. ... .|..|++.+..     ...+|.|.+|++.|.....|..|+++|+
T Consensus         9 ~~~~~~h~~~h~----~~~~~~C~~C~k~f~~~~~-~L~~H~~~h~~-----~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            9 GGPEEQWQRAIH----ERGEAVCPTCNVVTRKTLV-GLKKHMEVCQK-----LQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCSCSHHHHTTT----TTSCCCCTTTCCCCSSCSH-HHHHHHHHHHH-----HHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCcHHHHHHHhc----cCCCcCCCCCCCChhhhHH-HHHHHHHHHcC-----CCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            345678889988    899999999999999 998 99999987432     1468999999999999999999999999


Q ss_pred             CCCcccCC
Q psy13444         96 GEKPYKCS  103 (129)
Q Consensus        96 ~~k~~~c~  103 (129)
                      +++|....
T Consensus        79 ~~kp~~~~   86 (98)
T 2gqj_A           79 SAKPSDAE   86 (98)
T ss_dssp             CSCSSCCC
T ss_pred             CCCCCCCC
Confidence            99986543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.1e-15  Score=82.99  Aligned_cols=78  Identities=17%  Similarity=0.235  Sum_probs=67.3

Q ss_pred             ccCCcHHHHHHHHhhhcccCCCCCcccCccccccc-cCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHH
Q psy13444         12 TLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVL-SSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRH   90 (129)
Q Consensus        12 ~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f-~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h   90 (129)
                      .|.. ...|..|+..+.    ++++|.|+.|++.| .... .|..|++.+       ...+|.|.+|++.|.....|..|
T Consensus        15 ~~~~-~~~~~~~~~~~~----~~~~~~C~~C~k~F~~~~~-~L~~H~~~h-------~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           15 VYAA-GSLEEQWYLEIV----DKGSVSCPTCQAVGRKTIE-GLKKHMENC-------KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             SSCT-TCHHHHHHHHHH----HTSCEECTTTCSCEESSHH-HHHHHHHHH-------CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCC-chHHHHHHHHhc----CCCCcCCCCCCCCcccCHH-HHHHHHHHH-------CCCCeECCCCCCeeCCHHHHHHH
Confidence            4556 678889999888    89999999999999 8998 999999984       34679999999999999999999


Q ss_pred             -hhhccCCCcccC
Q psy13444         91 -LQTHTGEKPYKC  102 (129)
Q Consensus        91 -~~~h~~~k~~~c  102 (129)
                       +++|+++..+.+
T Consensus        82 ~~~~H~~~p~~~~   94 (96)
T 2ctd_A           82 VMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHTCCCSSCSC
T ss_pred             hHHhcCCCCCCCC
Confidence             999987655543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.9e-15  Score=77.37  Aligned_cols=57  Identities=30%  Similarity=0.549  Sum_probs=51.6

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhh-c-cCCCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQT-H-TGEKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~-h-~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      ...+|.|+.|++.|.....|..|++. | .+++||.|..|++.|...+.|..|+++++|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            34579999999999999999999988 7 689999999999999999999999999886

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=4.5e-15  Score=78.42  Aligned_cols=61  Identities=30%  Similarity=0.579  Sum_probs=54.1

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~  100 (129)
                      ++++|.|..|++.|.... .|..|++.+      ....+|.|..|++.|.....|..|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~-~l~~H~~~H------~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKG-NLASHKTVH------TGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHH-HHHHHHHHH------CCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHH-HHHHHHHHc------CCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            788999999999999998 999999873      3446799999999999999999999999999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.2e-15  Score=78.90  Aligned_cols=60  Identities=15%  Similarity=0.409  Sum_probs=41.8

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhhccC---CCcccCCCCCccccCchhHHHHHH-hhhcccC
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQTHTG---EKPYKCSHCGYETLRSHDLKRHMR-IKHKIVG  127 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~---~k~~~c~~C~k~f~~~~~l~~h~~-~~~~~~~  127 (129)
                      ...+|.|..|++.|.....|..|+++|.+   +++|.|..|++.|...+.|..|++ .|.+++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            34567777777777777777777777764   677777777777777777777774 4444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.52  E-value=2.8e-15  Score=74.54  Aligned_cols=52  Identities=17%  Similarity=0.302  Sum_probs=48.3

Q ss_pred             CCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         78 DYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        78 ~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      ++.|.....|..|+++|++++||.|..||+.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4567788889999999999999999999999999999999999999999984

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=2.4e-14  Score=71.77  Aligned_cols=53  Identities=19%  Similarity=0.352  Sum_probs=44.3

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhh
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      +++|+|..|++.|.. ...|..|+.+|.    ++++|.|+.|++.|.... .|..|++.
T Consensus         2 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYCGKFFRS-NYYLNIHLRTHT----GEKPYKCEFCEYAAAQKT-SLRYHLER   54 (57)
T ss_dssp             ---CBCTTTCCBCSC-HHHHHHHHHHHH----CCCCEECSSSSCEESSHH-HHHHHHHH
T ss_pred             CCCccCCCCcchhCC-hHHHHHHHHHcC----CCCCcCCCCCcchhCCHH-HHHHHHHH
Confidence            478999999999999 899999999888    888899999999998887 88888875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.6e-14  Score=74.70  Aligned_cols=57  Identities=19%  Similarity=0.360  Sum_probs=52.4

Q ss_pred             ccccccCCCCCcCCChhhHHHHhhhccCCCcccCC-CCCccccCchhHHHHHHhhhcccC
Q psy13444         69 SFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS-HCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        69 ~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~-~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      ..+|.|..|++.|. ...|..|+++ ++++||.|. .||+.|...+.|..|+++|...+|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35799999999999 9999999999 999999999 999999999999999999877765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.3e-14  Score=75.41  Aligned_cols=58  Identities=33%  Similarity=0.653  Sum_probs=52.1

Q ss_pred             CCCccccccC--CCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhh
Q psy13444         66 PGKSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        66 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      .....+|.|+  .|++.|.....|..|+++|.+++||.|..||+.|...+.|..|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3455679997  599999999999999999999999999999999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.4e-14  Score=74.20  Aligned_cols=61  Identities=20%  Similarity=0.450  Sum_probs=49.7

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~  100 (129)
                      ++++|.|..|++.|.... .|..|++.+      ....+|.|..|++.|.....|..|++.|.+++|.
T Consensus         6 ~~~~~~C~~C~k~f~~~~-~L~~H~~~H------~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKA-ALRIHERIH------CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSSSSCEESSHH-HHHHHHGGG------CCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCCCCcccCCHH-HHHHHHHHc------CCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            678888888888888887 888888863      3445688888888888888888888888888774

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=2.9e-14  Score=77.18  Aligned_cols=59  Identities=19%  Similarity=0.300  Sum_probs=44.2

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHh-hhccCCC
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHL-QTHTGEK   98 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~h~~~k   98 (129)
                      ..++|.|++|++.|.... .|.+|++.      +....+|.|.+|++.|.....|..|+ ++|++|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~-~L~~H~~~------H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKG-AQERHLRL------LHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHH-HHHHHHHT------TSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHH-HHhhhhhh------ccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            567778888888888887 88888876      33456788888888888888888885 5677654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.48  E-value=5e-15  Score=86.16  Aligned_cols=80  Identities=16%  Similarity=0.190  Sum_probs=66.7

Q ss_pred             cccccccccccC------CcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCC
Q psy13444          3 DVFCYHCNLTLP------SSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCL   76 (129)
Q Consensus         3 ~~~c~~c~~~f~------~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~   76 (129)
                      .+.|+.|.+.|.      . ...|..|+ .|.    ++++|.|..|++.|.... .|..|++.+        ..+|.|..
T Consensus        41 ~~~c~~~~~~~~~~~~~~~-~~~l~~h~-~h~----~~~~~~C~~C~k~f~~~~-~l~~H~~~H--------~~~~~C~~  105 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDE-SSYLYRLL-ASK----AISQFVCPLCLMPFSSSV-SLKQHIRYT--------EHTKVCPV  105 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTT-HHHHHHHH-HHH----HHCSEECTTTCCEESSHH-HHHHHHHHT--------CCCCBCTT
T ss_pred             cccchhhhcccCCCcccCC-HHHHHHHH-HhC----CCCCeECCCCCcccCCHh-HHHHHHHHC--------CCCCCCCC
Confidence            456666666554      4 66677776 577    789999999999999998 999999973        34699999


Q ss_pred             CCCcCCChhhHHHHhhhccCC
Q psy13444         77 CDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        77 c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      |++.|...+.|..|++.|+++
T Consensus       106 C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          106 CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCcccCCHHHHHHHHHHHCCc
Confidence            999999999999999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.9e-14  Score=75.62  Aligned_cols=60  Identities=22%  Similarity=0.376  Sum_probs=49.0

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      ++++|.|..|++.|.... .|..|++.+      ....+|.|.+|++.|.....|..|+++|+++.+
T Consensus        11 ~~k~~~C~~C~k~f~~~~-~L~~H~~~h------~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSS-ILVQHQRVH------TGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TCCCEECSSSCCEESSHH-HHHHHHHGG------GCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCccCCCCCCccCCHH-HHHHHHHhc------CCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            788888988998888887 888888863      344578898999999888889899888887643

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.2e-16  Score=84.08  Aligned_cols=69  Identities=17%  Similarity=0.202  Sum_probs=59.4

Q ss_pred             HHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         19 ALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        19 ~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      .|..|+++|.    ++++|.|..|++.|.... .|..             ..+|.|..|++.|.....|..|+++|++++
T Consensus         5 ~l~~H~~~h~----~~~~~~C~~C~k~f~~~~-~l~~-------------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~   66 (73)
T 2ctu_A            5 SSGKRQKIHL----GDRSQKCSKCGIIFIRRS-TLSR-------------RKTPMCEKCRKDSCQEAALNKDEGNESGKK   66 (73)
T ss_dssp             SCCCCCCCCC----CCSEEECSSSCCEEECCC-CCCC-------------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred             hHHHHHHHhC----CCCCeeCCcccchhCCHH-HhCc-------------CCCCCCCCCChhhcCHHHHHHHHHhhcCCC
Confidence            4566777777    899999999999999886 6543             246899999999999999999999999999


Q ss_pred             cccCCCC
Q psy13444         99 PYKCSHC  105 (129)
Q Consensus        99 ~~~c~~C  105 (129)
                      ||.|..|
T Consensus        67 ~~~C~~C   73 (73)
T 2ctu_A           67 TSGPSSG   73 (73)
T ss_dssp             CSSCCCC
T ss_pred             CCCCCCC
Confidence            9999887

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.6e-13  Score=69.36  Aligned_cols=51  Identities=18%  Similarity=0.391  Sum_probs=43.8

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHh
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSR   58 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~   58 (129)
                      |||+|..|++.|.. ...|..|+.+|.    ++++|.|+.|++.|.... .|..|+.
T Consensus         1 k~~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~   51 (60)
T 2adr_A            1 RSFVCEVCTRAFAR-QEHLKRHYRSHT----NEKPYPCGLCNRAFTRRD-LLIRHAQ   51 (60)
T ss_dssp             CCBCCTTTCCCBSC-HHHHHHHHHTTT----SSCSEECTTTCCEESSHH-HHHHHHT
T ss_pred             CcCcCCCCccccCC-HHHHHHHHHHhC----CCCCccCCCCCCccCCHH-HHHHHHH
Confidence            58889999999988 888999988887    788888988988888887 8888864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.42  E-value=2.2e-13  Score=68.12  Aligned_cols=52  Identities=15%  Similarity=0.311  Sum_probs=41.5

Q ss_pred             cccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhc
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKC   60 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c   60 (129)
                      ||+|..|++.|.. ...|..|+.+|.    ++++|.|+.|++.|.... .|..|++.+
T Consensus         1 p~~C~~C~~~f~~-~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~-~l~~H~~~h   52 (57)
T 1bbo_A            1 KYICEECGIRXKK-PSMLKKHIRTHT----DVRPYHCTYCNFSFKTKG-NLTKHMKSK   52 (57)
T ss_dssp             CCBCTTTCCBCSS-HHHHHHHHHHTS----SCCCEECSSSSCEESSHH-HHHHHHHSS
T ss_pred             CCcCCCCcCcCCC-HHHHHHHHHhcC----CCCCccCCCCCchhcCHH-HHHHHHHHh
Confidence            5788888888888 788888888877    778888888888888877 888887753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=8.7e-14  Score=65.38  Aligned_cols=40  Identities=28%  Similarity=0.512  Sum_probs=35.5

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5678889999999999999999999999999999999884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.8e-14  Score=66.51  Aligned_cols=41  Identities=32%  Similarity=0.551  Sum_probs=38.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            47889999999999999999999999999999999999985

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.42  E-value=7.2e-14  Score=65.68  Aligned_cols=40  Identities=35%  Similarity=0.580  Sum_probs=35.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5678899999999999999999999999999999999884

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.40  E-value=9.3e-14  Score=66.63  Aligned_cols=41  Identities=29%  Similarity=0.527  Sum_probs=31.1

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            36677777777777777777777777777777777777763

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.4e-14  Score=66.40  Aligned_cols=41  Identities=29%  Similarity=0.521  Sum_probs=37.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.6e-14  Score=65.60  Aligned_cols=40  Identities=33%  Similarity=0.556  Sum_probs=37.4

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            6788999999999999999999999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=8.8e-14  Score=66.07  Aligned_cols=41  Identities=29%  Similarity=0.496  Sum_probs=37.5

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            47888999999999999999999999999999999999985

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.1e-13  Score=72.39  Aligned_cols=69  Identities=20%  Similarity=0.397  Sum_probs=56.0

Q ss_pred             HHHHhhhcccCCCCCcccCccccccccCchhhHHHHHh-hcccccCCCCccccccCCCCCcCCChhhHHHHhhhc-cCCC
Q psy13444         21 ILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTH-TGEK   98 (129)
Q Consensus        21 ~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h-~~~k   98 (129)
                      ..|+++|.    ++++|.|.+|++.|.... .|..|++ .+.     ....+|.|+.|++.|.....|..|++.+ .++.
T Consensus         4 ~~H~~~H~----~~k~~~C~~C~k~f~~~~-~L~~H~~~~h~-----~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            4 GSSGRTHS----GEKPYECYICHARFTQSG-TMKMHILQKHT-----ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCS----CCCSEECTTTCCEESCHH-HHHHHHHHHSS-----SSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CccccccC----CCCCeECCCcCchhCCHH-HHHHHHHHhcC-----CCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            45677777    899999999999999998 9999987 432     1235799999999999999999999985 4444


Q ss_pred             c
Q psy13444         99 P   99 (129)
Q Consensus        99 ~   99 (129)
                      |
T Consensus        74 p   74 (77)
T 2ct1_A           74 P   74 (77)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.40  E-value=1.7e-13  Score=65.72  Aligned_cols=40  Identities=30%  Similarity=0.501  Sum_probs=31.2

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            6677777888888888888888888888888887777764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.2e-13  Score=66.22  Aligned_cols=41  Identities=24%  Similarity=0.393  Sum_probs=36.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            37788899999999999999999999999999999998884

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.40  E-value=1.1e-13  Score=66.41  Aligned_cols=41  Identities=32%  Similarity=0.501  Sum_probs=35.9

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788889999999999999999999999999999988874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.39  E-value=1.2e-13  Score=64.84  Aligned_cols=40  Identities=28%  Similarity=0.420  Sum_probs=37.0

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            6778999999999999999999999999999999999985

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=66.30  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=33.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.3e-13  Score=65.44  Aligned_cols=40  Identities=23%  Similarity=0.308  Sum_probs=30.3

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..||+.|...+.|..|+++|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4566777777777777777777777777777777777763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.24  Aligned_cols=41  Identities=29%  Similarity=0.538  Sum_probs=37.9

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47888999999999999999999999999999999999984

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.28  Aligned_cols=41  Identities=24%  Similarity=0.514  Sum_probs=34.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..||+.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCC
Confidence            46778888888888888888888888888888888888874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=1.1e-13  Score=66.40  Aligned_cols=41  Identities=32%  Similarity=0.500  Sum_probs=31.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            36677777778888888888888888888877777777764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.27  Aligned_cols=41  Identities=27%  Similarity=0.482  Sum_probs=33.8

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            46778888888888888888888888888888888888874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.27  Aligned_cols=41  Identities=34%  Similarity=0.521  Sum_probs=34.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            36778888888888888888888888888888888888874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1e-13  Score=66.45  Aligned_cols=41  Identities=34%  Similarity=0.519  Sum_probs=30.7

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            36667777777777777777777777777777777777763

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.39  E-value=2.3e-13  Score=71.30  Aligned_cols=55  Identities=36%  Similarity=0.673  Sum_probs=50.0

Q ss_pred             CccccccCC--CCCcCCChhhHHHHhhhccCCCcccCCC--CCccccCchhHHHHHHhh
Q psy13444         68 KSFNYVCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        68 ~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~  122 (129)
                      ...+|.|..  |++.|.....|..|+++|++++||.|..  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345699988  9999999999999999999999999965  999999999999998865

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=65.98  Aligned_cols=40  Identities=23%  Similarity=0.488  Sum_probs=33.9

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6778888888888888888888888888888888888874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=66.27  Aligned_cols=41  Identities=29%  Similarity=0.429  Sum_probs=35.9

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            47788889999999999999999999999999999988874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.8e-14  Score=66.53  Aligned_cols=41  Identities=29%  Similarity=0.508  Sum_probs=33.4

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.28  Aligned_cols=41  Identities=34%  Similarity=0.503  Sum_probs=36.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            47788899999999999999999999999999999998884

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.21  Aligned_cols=41  Identities=29%  Similarity=0.460  Sum_probs=32.1

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..||+.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            36677788888888888888888888888888888887774

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=65.98  Aligned_cols=41  Identities=34%  Similarity=0.585  Sum_probs=34.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46778888888888888888888888888888888888874

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=65.73  Aligned_cols=41  Identities=32%  Similarity=0.483  Sum_probs=30.5

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..||+.|...+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            36667777777777777777777777777777777777764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=65.44  Aligned_cols=41  Identities=32%  Similarity=0.483  Sum_probs=37.4

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            47888999999999999999999999999999999999984

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.19  Aligned_cols=41  Identities=32%  Similarity=0.527  Sum_probs=32.5

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            36777888888888888888888888888888888888774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=66.14  Aligned_cols=41  Identities=24%  Similarity=0.514  Sum_probs=33.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=66.31  Aligned_cols=41  Identities=29%  Similarity=0.541  Sum_probs=33.4

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.3e-14  Score=66.63  Aligned_cols=41  Identities=32%  Similarity=0.470  Sum_probs=34.8

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36778888888888888888888888888888888888874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=66.15  Aligned_cols=41  Identities=24%  Similarity=0.416  Sum_probs=35.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788888999999999999999999999999998888874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=65.64  Aligned_cols=41  Identities=32%  Similarity=0.436  Sum_probs=36.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            47788999999999999999999999999999999999884

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=65.63  Aligned_cols=41  Identities=27%  Similarity=0.573  Sum_probs=37.1

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|.+++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999884

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=66.07  Aligned_cols=41  Identities=29%  Similarity=0.432  Sum_probs=29.7

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            36667777777777777777777777777777777777763

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=66.26  Aligned_cols=39  Identities=33%  Similarity=0.537  Sum_probs=26.1

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            556666666666666666666666666666666666665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=65.87  Aligned_cols=40  Identities=30%  Similarity=0.484  Sum_probs=29.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777763

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.1e-13  Score=65.09  Aligned_cols=40  Identities=35%  Similarity=0.549  Sum_probs=36.2

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            6778899999999999999999999999999999999984

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.38  E-value=1.2e-13  Score=66.21  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=27.3

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            5666666777777777777777777777777776666663

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=66.00  Aligned_cols=41  Identities=32%  Similarity=0.515  Sum_probs=31.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            36677777888888888888888888888888888777763

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=65.94  Aligned_cols=41  Identities=29%  Similarity=0.382  Sum_probs=29.8

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            35667777777777777777777777777777777777763

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=66.17  Aligned_cols=41  Identities=34%  Similarity=0.556  Sum_probs=33.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            36777888888888888888888888888888888888774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=65.50  Aligned_cols=41  Identities=24%  Similarity=0.360  Sum_probs=35.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888899999999999999999999999998888874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4e-13  Score=69.17  Aligned_cols=58  Identities=16%  Similarity=0.323  Sum_probs=36.8

Q ss_pred             CCCcccCccccccccCchhhHHHHHhh-cccccCCCCccccccCCCCCcCCChhhHHHHhhhccC
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRK-CAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~-c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      ++++|.|+.|++.|.... .|..|++. +.     ....+|.|+.|++.|.....|..|++.|.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~-~l~~H~~~~H~-----~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHIS-NFCRHYVTSHK-----RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHH-HHHHHHHHHSS-----SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHH-HHHHHHHHHcC-----CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            566677777777776665 66666664 21     133456777777777777777777666554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=66.48  Aligned_cols=41  Identities=32%  Similarity=0.575  Sum_probs=36.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788899999999999999999999999999999988874

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=65.95  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=31.7

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..||+.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            36677777888888888888888888888888888777764

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=65.41  Aligned_cols=39  Identities=31%  Similarity=0.470  Sum_probs=25.9

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            455666666666666666666666666666666666665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=65.85  Aligned_cols=41  Identities=32%  Similarity=0.466  Sum_probs=34.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888888888888888888888888888888888874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=66.04  Aligned_cols=41  Identities=34%  Similarity=0.532  Sum_probs=33.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.7e-13  Score=65.68  Aligned_cols=41  Identities=29%  Similarity=0.502  Sum_probs=35.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            36778888888999999999988888999988888888874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.4e-13  Score=65.92  Aligned_cols=41  Identities=32%  Similarity=0.509  Sum_probs=30.8

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36667777777777777777777777777777777777764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.1e-13  Score=65.37  Aligned_cols=40  Identities=30%  Similarity=0.476  Sum_probs=28.4

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.6e-13  Score=65.75  Aligned_cols=40  Identities=38%  Similarity=0.615  Sum_probs=28.6

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.7e-13  Score=65.64  Aligned_cols=41  Identities=37%  Similarity=0.596  Sum_probs=31.5

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            36677777788888888888888888888888888777774

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=65.09  Aligned_cols=40  Identities=30%  Similarity=0.483  Sum_probs=31.0

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5667777788888888888888888888888887777764

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=65.82  Aligned_cols=41  Identities=32%  Similarity=0.544  Sum_probs=31.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            36677777777888888888888788888877777777763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-13  Score=65.19  Aligned_cols=41  Identities=32%  Similarity=0.581  Sum_probs=36.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            37788899999999999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.9e-13  Score=65.50  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=33.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=65.90  Aligned_cols=41  Identities=32%  Similarity=0.490  Sum_probs=33.8

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            36777888888888888888888888888888888888874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=65.96  Aligned_cols=40  Identities=35%  Similarity=0.611  Sum_probs=27.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            5666677777777777777777777777777777776663

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.37  E-value=1.2e-13  Score=66.24  Aligned_cols=40  Identities=28%  Similarity=0.390  Sum_probs=27.1

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5566666667777777777777777777766666666663

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=65.95  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=27.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666677777777777777777777777777777776663

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-13  Score=65.23  Aligned_cols=40  Identities=33%  Similarity=0.454  Sum_probs=26.4

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            5556666666666666666666666666666666666653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=1.3e-12  Score=71.88  Aligned_cols=69  Identities=17%  Similarity=0.152  Sum_probs=52.4

Q ss_pred             CcccCccccccccCchhhHHHHHhh-cccccC--CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         35 NKLKCYHCKQVLSSSMDDLLFHSRK-CAVVWR--PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        35 ~~~~c~~c~~~f~~~~~~l~~h~~~-c~~~~~--~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      ..++|..|++.|.... .|..|++. +.....  ...-.+|.|..|++.|.....|..|+++|++++||.|..
T Consensus        24 ~~~~C~~C~k~f~~~~-~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMH-ELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHH-HHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHH-HHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3466888999998887 88888875 332000  000011899999999999999999999999999999863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=65.82  Aligned_cols=41  Identities=32%  Similarity=0.573  Sum_probs=34.7

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888888888888888888888888888888888874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.3e-13  Score=65.39  Aligned_cols=41  Identities=32%  Similarity=0.548  Sum_probs=36.6

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999884

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=7.2e-13  Score=70.45  Aligned_cols=65  Identities=18%  Similarity=0.318  Sum_probs=44.7

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHh-hhccCCCccc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHL-QTHTGEKPYK  101 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~h~~~k~~~  101 (129)
                      ++++|.|.+|++.|.... .|..|++.+..   -....+|.|..|++.|.....|..|+ ..|.++++..
T Consensus         4 ~~k~~~C~~C~k~f~~~~-~L~~H~~~h~~---~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKA-SLNWHQRKHAE---TVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             SCCCEECSSSCCEESSHH-HHHHHHHHHHH---HTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCcCeECCCCCCeeCCHH-HHHHHHHHhhc---cCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            677777777777777776 77777775432   11234677888888888888888887 4566666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=65.52  Aligned_cols=40  Identities=33%  Similarity=0.474  Sum_probs=32.2

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            5677888888888888888888888888888888888774

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=65.67  Aligned_cols=41  Identities=27%  Similarity=0.385  Sum_probs=34.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36778888888888888888888888888888888888874

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.6e-13  Score=65.77  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=30.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            35667777777777777777777777777777777777763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=65.85  Aligned_cols=41  Identities=34%  Similarity=0.588  Sum_probs=33.0

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            36777888888888888888888888888888888888874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=65.83  Aligned_cols=40  Identities=38%  Similarity=0.552  Sum_probs=28.0

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5566677777777777777777777777777777777663

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=65.48  Aligned_cols=40  Identities=38%  Similarity=0.562  Sum_probs=28.3

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=65.17  Aligned_cols=40  Identities=35%  Similarity=0.499  Sum_probs=28.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-13  Score=64.93  Aligned_cols=40  Identities=30%  Similarity=0.545  Sum_probs=32.9

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6777888888888888888888888888888888888874

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.6e-13  Score=65.76  Aligned_cols=40  Identities=20%  Similarity=0.301  Sum_probs=27.8

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5666677777777777777777777777777777776663

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.2e-13  Score=65.28  Aligned_cols=39  Identities=33%  Similarity=0.531  Sum_probs=26.4

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            556666666666666666666666666666666666665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.6e-13  Score=65.02  Aligned_cols=40  Identities=28%  Similarity=0.456  Sum_probs=31.6

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5667778888888888888888888888888888887774

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.1e-13  Score=65.66  Aligned_cols=41  Identities=32%  Similarity=0.550  Sum_probs=37.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=4e-13  Score=63.75  Aligned_cols=40  Identities=20%  Similarity=0.250  Sum_probs=35.8

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            6778889999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.8e-13  Score=64.92  Aligned_cols=41  Identities=22%  Similarity=0.300  Sum_probs=36.2

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            47788899999999999999999999999999999998884

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=3.1e-13  Score=64.71  Aligned_cols=40  Identities=18%  Similarity=0.240  Sum_probs=30.8

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            5667777777888888888887778888877777777764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.35  E-value=2.5e-13  Score=65.03  Aligned_cols=40  Identities=30%  Similarity=0.492  Sum_probs=28.2

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=2.7e-13  Score=64.98  Aligned_cols=40  Identities=25%  Similarity=0.387  Sum_probs=28.1

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            5566777777777777777777777777777777777663

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=65.44  Aligned_cols=40  Identities=28%  Similarity=0.546  Sum_probs=28.5

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            5666777777777777777777777777777777777663

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.2e-13  Score=64.69  Aligned_cols=40  Identities=25%  Similarity=0.425  Sum_probs=28.0

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            5566777777777777777777777777777777777663

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=65.39  Aligned_cols=40  Identities=28%  Similarity=0.444  Sum_probs=30.2

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777763

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.1e-13  Score=64.32  Aligned_cols=40  Identities=35%  Similarity=0.531  Sum_probs=30.4

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            5667777777777777777777777777777777777764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=65.56  Aligned_cols=41  Identities=29%  Similarity=0.472  Sum_probs=34.3

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46778888888888888888888888888888888888874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-13  Score=65.76  Aligned_cols=39  Identities=31%  Similarity=0.535  Sum_probs=25.8

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            555666666666666666666666666666666666665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1.7e-12  Score=64.30  Aligned_cols=46  Identities=22%  Similarity=0.420  Sum_probs=41.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhh-hccCCCcccCCCCCccccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQ-THTGEKPYKCSHCGYETLR  111 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~k~~~c~~C~k~f~~  111 (129)
                      .....+|.|.+|++.|.....|..|++ +|.+++||.|..|++.|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            345567999999999999999999997 8999999999999999975

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6e-13  Score=63.94  Aligned_cols=40  Identities=30%  Similarity=0.537  Sum_probs=28.3

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHH-hhhcccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMR-IKHKIVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~-~~~~~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|++ +|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            5666777777777777777777777777777 777777663

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=64.96  Aligned_cols=39  Identities=31%  Similarity=0.526  Sum_probs=25.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCC
Confidence            555666666666666666666666666666666666665

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4e-13  Score=64.36  Aligned_cols=40  Identities=25%  Similarity=0.368  Sum_probs=34.6

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhc-ccCCC
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHK-IVGKS  129 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~-~~~~~  129 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|++ ++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            67788888889999999999998999999888888 88874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=2.2e-12  Score=67.68  Aligned_cols=56  Identities=25%  Similarity=0.431  Sum_probs=41.1

Q ss_pred             CCCcccCc--cccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhcc
Q psy13444         33 PDNKLKCY--HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHT   95 (129)
Q Consensus        33 ~~~~~~c~--~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~   95 (129)
                      ++++|.|+  .|++.|.... .|..|++.+.      ...+|.|+.|++.|.....|..|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~-~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSD-ELTRHIRIHT------GQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHH-HHHHHHHHHH------CCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHH-HHHHHHHhhC------CCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            67778886  5888888776 7888877632      3346788888888888888888877763

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.3e-12  Score=62.60  Aligned_cols=39  Identities=26%  Similarity=0.412  Sum_probs=30.8

Q ss_pred             hhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         91 LQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        91 ~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            456777888888888888888888888888888888774

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.2e-12  Score=61.08  Aligned_cols=38  Identities=26%  Similarity=0.462  Sum_probs=32.3

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      ++|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            45788888888888888888888888888888888874

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.1e-12  Score=63.31  Aligned_cols=43  Identities=23%  Similarity=0.289  Sum_probs=33.1

Q ss_pred             CCcccccccccccCCcHHHHHHHHh-hhcccCCCCCcccCccccccccC
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSK-ICSAVNRPDNKLKCYHCKQVLSS   48 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~-~~~~~~~~~~~~~c~~c~~~f~~   48 (129)
                      ++||.|..|++.|.. ...|..|+. +|.    ++++|.|.+|++.|.+
T Consensus        10 ~k~~~C~~C~k~f~~-~~~L~~H~~~~H~----~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSR-PDHLNGHIKQVHT----SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESS-HHHHHHHHHHTSC----CCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCC-HHHHHHHHHHhcC----CCCCccCCCCCCCCCC
Confidence            467888888888888 788888875 777    7778888888877764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.2e-12  Score=61.72  Aligned_cols=39  Identities=31%  Similarity=0.479  Sum_probs=27.7

Q ss_pred             hhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         91 LQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        91 ~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +++|.+++||.|..|++.|...+.|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            455677777777777777777777777777777777763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=5.6e-15  Score=77.61  Aligned_cols=65  Identities=12%  Similarity=0.150  Sum_probs=56.0

Q ss_pred             hHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         52 DLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        52 ~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .|..|++.      +....+|.|..|++.|.....|..       +++|.|..|++.|...+.|..|+++|++++||.
T Consensus         5 ~l~~H~~~------h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A            5 SSGKRQKI------HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             SCCCCCCC------CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             hHHHHHHH------hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            45566665      445678999999999999888766       789999999999999999999999999999984

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=3.6e-12  Score=60.12  Aligned_cols=38  Identities=21%  Similarity=0.377  Sum_probs=28.9

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      +.|++++||.|..|++.|...+.|..|+++|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            35677777888888888887778888877777777763

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.6e-12  Score=59.21  Aligned_cols=36  Identities=19%  Similarity=0.445  Sum_probs=33.6

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      ++|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999886

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=62.49  Aligned_cols=39  Identities=31%  Similarity=0.558  Sum_probs=30.1

Q ss_pred             hhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         91 LQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        91 ~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      .++|++++||+|..|++.|...+.|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            456777788888888888888888888888888877774

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=5.8e-12  Score=60.77  Aligned_cols=42  Identities=24%  Similarity=0.423  Sum_probs=37.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      .....+|.|.+|++.|.....|..|+++|++++||.|..|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            345567999999999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=61.79  Aligned_cols=38  Identities=34%  Similarity=0.459  Sum_probs=22.0

Q ss_pred             hhhccCCCcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         91 LQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        91 ~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      +++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCC
Confidence            34455555566666666666555666665555555555

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.23  E-value=5.1e-12  Score=58.26  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=29.4

Q ss_pred             ccCCCcccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         94 HTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        94 h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |++++||.|..||+.|...+.|..|+++|++++||.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            567788888888888888888888888888888873

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.22  E-value=5.4e-12  Score=57.41  Aligned_cols=36  Identities=28%  Similarity=0.505  Sum_probs=33.7

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |+++|++++||.|..|++.|...+.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678899999999999999999999999999999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.21  E-value=7.2e-12  Score=56.21  Aligned_cols=35  Identities=26%  Similarity=0.440  Sum_probs=32.0

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      +|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            37889999999999999999999999999999876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=9e-12  Score=60.09  Aligned_cols=39  Identities=18%  Similarity=0.131  Sum_probs=32.2

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQ   44 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~   44 (129)
                      +++|.|..|++.|.. ...|..|+++|.    ++++|.|.+|++
T Consensus        10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRD-VYHLNRHKLSHS----GEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESS-HHHHHHHGGGSC----SCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCC-HHHHHHHHHhcC----CCCCccCCCCCC
Confidence            467888888888888 888888888887    788888888875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8.9e-12  Score=64.15  Aligned_cols=58  Identities=17%  Similarity=0.351  Sum_probs=42.3

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccC-CCCCcCCChhhHHHHhhhccCCCc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCC-LCDYNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~-~c~~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      ++++|.|..|++.|. .. .|..|++.+       ...+|.|+ .|++.|..++.|..|+++|...+|
T Consensus         7 ~~~~~~C~~C~k~f~-~~-~L~~H~~~~-------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FD-TIQSHQYQC-------PRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HH-HHHHHHHHC-------SSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HH-HHHHHHHHc-------CCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            567788888888888 66 788887751       23567888 788888888888888887765544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=1.9e-11  Score=63.91  Aligned_cols=51  Identities=24%  Similarity=0.499  Sum_probs=29.3

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhcccCCCCCcccCcc--ccccccCchhhHHHHHh
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICSAVNRPDNKLKCYH--CKQVLSSSMDDLLFHSR   58 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~--c~~~f~~~~~~l~~h~~   58 (129)
                      ++|.|..  |++.|.. ...|..|+.+|.    ++++|.|..  |++.|.... .|..|++
T Consensus        16 ~~~~C~~~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~~~C~k~f~~~~-~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFK-SSHLKAHTRTHT----GEKPFSCSWKGCERRFARSD-ELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESS-HHHHHHHHHHHS----SSCSEECCCTTCCCEESSHH-HHHHHTT
T ss_pred             CceeCCCCCCccccCC-HHHHHHHHHhcC----CCCCccCCCCCCCcccCCHH-HHHhHhh
Confidence            4555655  6666666 566666666555    555666643  666665555 5555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.19  E-value=1.2e-11  Score=55.56  Aligned_cols=35  Identities=17%  Similarity=0.511  Sum_probs=32.0

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      +|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47889999999999999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.1e-11  Score=58.19  Aligned_cols=40  Identities=30%  Similarity=0.392  Sum_probs=35.0

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.4e-11  Score=57.98  Aligned_cols=40  Identities=28%  Similarity=0.345  Sum_probs=35.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.17  E-value=1.3e-11  Score=58.99  Aligned_cols=40  Identities=30%  Similarity=0.396  Sum_probs=35.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|++|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=2e-11  Score=58.25  Aligned_cols=40  Identities=28%  Similarity=0.413  Sum_probs=34.8

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=2.3e-11  Score=55.61  Aligned_cols=36  Identities=19%  Similarity=0.413  Sum_probs=33.2

Q ss_pred             ccCCCcccCC--CCCccccCchhHHHHHHhhhcccCCC
Q psy13444         94 HTGEKPYKCS--HCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        94 h~~~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |++++||.|.  .|++.|...+.|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5789999999  59999999999999999999999984

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=2.9e-11  Score=57.40  Aligned_cols=40  Identities=20%  Similarity=0.437  Sum_probs=28.6

Q ss_pred             CCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCC
Q psy13444         67 GKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCG  106 (129)
Q Consensus        67 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~  106 (129)
                      ....+|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3445677777777777777777777777777777777765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.16  E-value=2.5e-11  Score=57.90  Aligned_cols=40  Identities=25%  Similarity=0.376  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3455679999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.4e-11  Score=57.96  Aligned_cols=40  Identities=25%  Similarity=0.371  Sum_probs=34.8

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=2e-11  Score=62.61  Aligned_cols=34  Identities=21%  Similarity=0.409  Sum_probs=17.4

Q ss_pred             cCCCcccCCC--CCccccCchhHHHHH-HhhhcccCC
Q psy13444         95 TGEKPYKCSH--CGYETLRSHDLKRHM-RIKHKIVGK  128 (129)
Q Consensus        95 ~~~k~~~c~~--C~k~f~~~~~l~~h~-~~~~~~~~~  128 (129)
                      .|+|||.|..  |+++|...+.|.+|+ ++|++++||
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            4455555533  555555555555554 345555554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.6e-11  Score=57.84  Aligned_cols=40  Identities=28%  Similarity=0.439  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.7e-11  Score=58.43  Aligned_cols=40  Identities=23%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3445679999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=58.13  Aligned_cols=40  Identities=25%  Similarity=0.336  Sum_probs=35.1

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.5e-11  Score=57.84  Aligned_cols=40  Identities=25%  Similarity=0.314  Sum_probs=34.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3445678999999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.1e-11  Score=58.17  Aligned_cols=40  Identities=30%  Similarity=0.391  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=2.1e-11  Score=58.12  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=34.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.3e-11  Score=58.90  Aligned_cols=40  Identities=25%  Similarity=0.389  Sum_probs=34.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.7e-11  Score=57.71  Aligned_cols=40  Identities=30%  Similarity=0.434  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=59.61  Aligned_cols=38  Identities=37%  Similarity=0.695  Sum_probs=22.9

Q ss_pred             hhhccCCCcccCC--CCCccccCchhHHHHHHhhhcccCC
Q psy13444         91 LQTHTGEKPYKCS--HCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        91 ~~~h~~~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      .++|++++||.|.  .|++.|...+.|..|+++|++++||
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3455566666665  5666666666666666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-11  Score=57.66  Aligned_cols=40  Identities=23%  Similarity=0.239  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=58.07  Aligned_cols=40  Identities=25%  Similarity=0.408  Sum_probs=34.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.2e-11  Score=58.06  Aligned_cols=40  Identities=25%  Similarity=0.432  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.9e-11  Score=57.64  Aligned_cols=40  Identities=30%  Similarity=0.471  Sum_probs=34.8

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445679999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.4e-11  Score=57.92  Aligned_cols=40  Identities=33%  Similarity=0.380  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445679999999999999999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=3.6e-11  Score=57.08  Aligned_cols=38  Identities=13%  Similarity=0.138  Sum_probs=31.7

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCcccc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCK   43 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~   43 (129)
                      ++||+|..|++.|.. ...|..|+++|.    ++++|.|+.||
T Consensus         8 ~k~~~C~~C~k~f~~-~~~l~~H~~~H~----~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKR-KDRMSYHVRSHD----GSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSC-HHHHHHHHHHHS----CCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCC-HHHHHHHHHHcc----CCCCCCCcCCC
Confidence            578888888888888 888888888888    78888888875

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=2.6e-11  Score=57.83  Aligned_cols=40  Identities=28%  Similarity=0.414  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.1e-11  Score=58.11  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445679999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.1e-11  Score=57.63  Aligned_cols=40  Identities=25%  Similarity=0.373  Sum_probs=34.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=57.87  Aligned_cols=40  Identities=30%  Similarity=0.491  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.3e-11  Score=57.43  Aligned_cols=40  Identities=33%  Similarity=0.468  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3445678999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=58.07  Aligned_cols=40  Identities=28%  Similarity=0.393  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=57.99  Aligned_cols=40  Identities=30%  Similarity=0.395  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.14  E-value=3.1e-11  Score=57.50  Aligned_cols=40  Identities=25%  Similarity=0.334  Sum_probs=34.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.13  E-value=4e-11  Score=53.17  Aligned_cols=31  Identities=19%  Similarity=0.511  Sum_probs=25.2

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      +||.|..||+.|...+.|..|+++|+|++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4678888888888888888888888888876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=57.94  Aligned_cols=40  Identities=28%  Similarity=0.358  Sum_probs=35.0

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.5e-11  Score=57.86  Aligned_cols=40  Identities=28%  Similarity=0.406  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.3e-11  Score=57.99  Aligned_cols=40  Identities=30%  Similarity=0.444  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.4e-11  Score=57.93  Aligned_cols=40  Identities=30%  Similarity=0.554  Sum_probs=34.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.6e-11  Score=57.33  Aligned_cols=40  Identities=23%  Similarity=0.331  Sum_probs=34.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.2e-11  Score=57.46  Aligned_cols=40  Identities=18%  Similarity=0.160  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445678899999999999999999999999999998876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.6e-11  Score=57.33  Aligned_cols=40  Identities=25%  Similarity=0.405  Sum_probs=33.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445678999999999999999999999999999998876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.8e-11  Score=57.25  Aligned_cols=40  Identities=25%  Similarity=0.396  Sum_probs=34.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.1e-11  Score=57.50  Aligned_cols=40  Identities=23%  Similarity=0.200  Sum_probs=34.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=57.90  Aligned_cols=40  Identities=28%  Similarity=0.382  Sum_probs=34.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=57.85  Aligned_cols=40  Identities=28%  Similarity=0.424  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3455678999999999999999999999999999999876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5.6e-11  Score=53.95  Aligned_cols=35  Identities=20%  Similarity=0.547  Sum_probs=32.0

Q ss_pred             hhccCCCcccCCCCCccccCc-hhHHHHHHhhhccc
Q psy13444         92 QTHTGEKPYKCSHCGYETLRS-HDLKRHMRIKHKIV  126 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~-~~l~~h~~~~~~~~  126 (129)
                      ++|.+++||.|..|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468899999999999999999 99999999999874

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.5e-11  Score=56.61  Aligned_cols=40  Identities=33%  Similarity=0.402  Sum_probs=34.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhh-hccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQ-THTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|++ +|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            345567899999999999999999999 8999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=57.49  Aligned_cols=40  Identities=30%  Similarity=0.447  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445678999999999999999999999999999998764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.5e-11  Score=56.20  Aligned_cols=40  Identities=30%  Similarity=0.412  Sum_probs=35.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-10  Score=55.67  Aligned_cols=37  Identities=11%  Similarity=0.161  Sum_probs=24.0

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      ++||+|..|++.|.. ...|..|+.+|.    ++++|.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~C   46 (46)
T 2ytm_A           10 EKPYKCMECGKAFGD-NSSCTQHQRLHT----GQRPSGPSSG   46 (46)
T ss_dssp             CCSSSBTTTTBCCSS-HHHHHHHHHHHH----SCCCCCCCCC
T ss_pred             CCCcCCCCCCchhCC-HHHHHHHHHHcC----CCCCCCCCCC
Confidence            356666666666666 666666666666    6666666654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=5.9e-12  Score=64.13  Aligned_cols=48  Identities=10%  Similarity=0.287  Sum_probs=37.0

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHH
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLK  116 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~  116 (129)
                      +....+|.|+.|++.|.....|.   ++|++++||.|..||+.|...+++.
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            34456788888888888777765   7788888999999998888776553

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.08  E-value=1.1e-10  Score=55.56  Aligned_cols=36  Identities=11%  Similarity=0.276  Sum_probs=21.3

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      ++|+|..|++.|.. ...|..|+.+|.    ++++|.|.+|
T Consensus        11 k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~C   46 (46)
T 2el6_A           11 NPYKCSQCEKSFSG-KLRLLVHQRMHT----REKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESS-HHHHHHHHGGGC----CSSCCSCCCC
T ss_pred             CCeECCCCCcccCC-HHHHHHHHHHcC----CCCCCCCCCC
Confidence            45666666666666 566666666555    5556665554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-10  Score=55.50  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=35.1

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455679999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=55.65  Aligned_cols=37  Identities=14%  Similarity=0.140  Sum_probs=24.8

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      +++|+|+.|++.|.. ...|..|+++|.    ++++|.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~C   46 (46)
T 2em8_A           10 EKPYKCVECGKGYKR-RLDLDFHQRVHT----GEKLSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESS-HHHHHHHHHHHH----CCCCCCSCCC
T ss_pred             CCCeECcccCchhCC-HHHHHHHHHHHc----CCCCCCCCCC
Confidence            356677777777766 666777776666    6666666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=55.30  Aligned_cols=36  Identities=17%  Similarity=0.132  Sum_probs=21.2

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      +||+|..|++.|.. ...|..|+.+|.    ++++|.|+.|
T Consensus        11 k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C~~C   46 (46)
T 2ytd_A           11 KPYKCSECGKAFHR-HTHLNEHRRIHT----GYRPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESS-HHHHHHHHHHHT----CCCSSCSSCC
T ss_pred             cCeECCCCCCeeCC-hHHHHHHHHHcC----CCCCCCCCCC
Confidence            45666666666666 566666665555    5555655544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.3e-10  Score=55.29  Aligned_cols=36  Identities=17%  Similarity=0.129  Sum_probs=21.9

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      +||+|..|++.|.. ...|..|+.+|.    ++++|.|..|
T Consensus        11 ~~~~C~~C~k~f~~-~~~L~~H~~~H~----~~k~~~C~~C   46 (46)
T 2yso_A           11 KSHQCRECGEIFFQ-YVSLIEHQVLHM----GQKNSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESS-HHHHHHHHHHHS----CCSCCCTTCC
T ss_pred             CCEEccccChhhCC-HHHHHHHHHHhC----CCCCCCCCCC
Confidence            45666666666666 566666666665    5566666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=55.53  Aligned_cols=36  Identities=17%  Similarity=0.131  Sum_probs=20.0

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      +||.|+.|++.|.. ...|..|+.+|.    ++++|.|+.|
T Consensus        11 k~~~C~~C~k~F~~-~~~L~~H~~~H~----~~k~~~C~~C   46 (46)
T 2eoo_A           11 RPYGCNECGKNFGR-HSHLIEHLKRHF----REKSSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESS-HHHHHHHHHHHH----STTSSCCSCC
T ss_pred             CCEEccccCcccCC-HHHHHHHHHHHc----CCCCCCCCCC
Confidence            45555555555555 555555555555    5555555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=8.5e-11  Score=53.83  Aligned_cols=33  Identities=21%  Similarity=0.523  Sum_probs=29.7

Q ss_pred             hccCCCcccCCC--CCccccCchhHHHHHHhhhcc
Q psy13444         93 THTGEKPYKCSH--CGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        93 ~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      .+.+++||+|..  |+++|...+.|..|+++|+|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999986  999999999999999999885

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.2e-10  Score=55.40  Aligned_cols=36  Identities=17%  Similarity=0.201  Sum_probs=21.4

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHC   42 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c   42 (129)
                      ++|+|..|++.|.. ...|..|+.+|.    ++++|.|..|
T Consensus        11 ~~~~C~~C~k~f~~-~~~L~~H~~~H~----~~k~~~C~~C   46 (46)
T 2en6_A           11 KPYGCNECGKTFSQ-KSILSAHQRTHT----GEKPSGPSSG   46 (46)
T ss_dssp             CCEEETTTTEEESS-HHHHHHHHHHHS----SCCCSSSCCC
T ss_pred             cCeECCCCCcccCc-hHHHHHHHHHcC----CCCCCCCCCC
Confidence            45666666666666 566666666655    5556665554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.7e-11  Score=54.30  Aligned_cols=35  Identities=29%  Similarity=0.583  Sum_probs=31.3

Q ss_pred             hhhccCCCcccCCCCCccccCchhHHHH-HHhhhcc
Q psy13444         91 LQTHTGEKPYKCSHCGYETLRSHDLKRH-MRIKHKI  125 (129)
Q Consensus        91 ~~~h~~~k~~~c~~C~k~f~~~~~l~~h-~~~~~~~  125 (129)
                      +++|++++||+|..|++.|...+.|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3578999999999999999999999999 8888764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.5e-11  Score=55.83  Aligned_cols=40  Identities=28%  Similarity=0.403  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455679999999999999999999999999999999764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=52.55  Aligned_cols=34  Identities=29%  Similarity=0.630  Sum_probs=31.1

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5788999999999999999999999999998874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9.3e-11  Score=52.85  Aligned_cols=34  Identities=35%  Similarity=0.625  Sum_probs=30.7

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|++++||+|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5788999999999999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=8.5e-11  Score=52.98  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=30.4

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.7e-10  Score=51.90  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=30.5

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4788899999999999999999999999998874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.5e-10  Score=54.31  Aligned_cols=39  Identities=26%  Similarity=0.421  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.1e-10  Score=54.56  Aligned_cols=39  Identities=31%  Similarity=0.409  Sum_probs=33.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.3e-10  Score=53.27  Aligned_cols=38  Identities=16%  Similarity=0.295  Sum_probs=32.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34456789999999999999999999999999999874

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=4.4e-10  Score=52.71  Aligned_cols=39  Identities=21%  Similarity=0.353  Sum_probs=34.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            345567999999999999999999999999999999864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.5e-10  Score=54.31  Aligned_cols=39  Identities=31%  Similarity=0.471  Sum_probs=33.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.6e-10  Score=54.26  Aligned_cols=39  Identities=23%  Similarity=0.313  Sum_probs=33.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999998863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.6e-10  Score=54.25  Aligned_cols=39  Identities=26%  Similarity=0.444  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344567999999999999999999999999999998863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=54.37  Aligned_cols=39  Identities=31%  Similarity=0.420  Sum_probs=33.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            344567999999999999999999999999999998863

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.00  E-value=2.1e-10  Score=53.47  Aligned_cols=38  Identities=24%  Similarity=0.422  Sum_probs=32.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            34456789999999999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.00  E-value=7.2e-11  Score=56.62  Aligned_cols=39  Identities=13%  Similarity=0.279  Sum_probs=34.6

Q ss_pred             HHHhhhccCCCcccCC--CCCccccCchhHHHHHHhhhccc
Q psy13444         88 KRHLQTHTGEKPYKCS--HCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        88 ~~h~~~h~~~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ..|...|++++||.|.  .||+.|...+.|..|+++|+|++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4556679999999995  79999999999999999999875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2e-10  Score=54.70  Aligned_cols=39  Identities=28%  Similarity=0.430  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            445567999999999999999999999999999999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=54.45  Aligned_cols=39  Identities=31%  Similarity=0.511  Sum_probs=33.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            345567999999999999999999999999999998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.1e-10  Score=54.61  Aligned_cols=39  Identities=28%  Similarity=0.437  Sum_probs=33.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|+.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.00  E-value=2e-10  Score=54.69  Aligned_cols=39  Identities=26%  Similarity=0.399  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.6e-10  Score=54.27  Aligned_cols=39  Identities=23%  Similarity=0.411  Sum_probs=33.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.1e-10  Score=53.94  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344567999999999999999999999999999998863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.2e-10  Score=53.93  Aligned_cols=39  Identities=28%  Similarity=0.451  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345567999999999999999999999999999998863

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.99  E-value=1.6e-10  Score=55.67  Aligned_cols=34  Identities=24%  Similarity=0.392  Sum_probs=27.0

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHH-hhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMR-IKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~-~~~~~~  126 (129)
                      +|++++||.|..|++.|...+.|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4778888888889988888888888888 887765

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=54.43  Aligned_cols=39  Identities=31%  Similarity=0.507  Sum_probs=33.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344567999999999999999999999999999998864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=53.80  Aligned_cols=39  Identities=26%  Similarity=0.388  Sum_probs=33.8

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            445567999999999999999999999999999999864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=54.19  Aligned_cols=39  Identities=31%  Similarity=0.479  Sum_probs=33.0

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567899999999999999999999999999998864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3e-10  Score=54.03  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=33.1

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            344567899999999999999999999999999998863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=53.75  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999998863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.2e-10  Score=53.31  Aligned_cols=38  Identities=26%  Similarity=0.368  Sum_probs=32.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            34456789999999999999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.1e-10  Score=51.04  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=30.0

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678899999999999999999999999998864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=5.3e-11  Score=62.87  Aligned_cols=54  Identities=28%  Similarity=0.467  Sum_probs=39.1

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      .++.|..|+..|. ...|..|+ .|.+++|+.|..|++.|. ...|..|++++.++.
T Consensus        16 r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           16 RLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             cccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4677777777774 67777777 677777777777777766 477777777776654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=54.14  Aligned_cols=39  Identities=31%  Similarity=0.455  Sum_probs=33.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            345567899999999999999999999999999998863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.2e-10  Score=52.80  Aligned_cols=37  Identities=24%  Similarity=0.476  Sum_probs=32.1

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3455679999999999999999999999999999877

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=9.5e-10  Score=52.23  Aligned_cols=39  Identities=26%  Similarity=0.454  Sum_probs=33.5

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999998863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.5e-10  Score=54.28  Aligned_cols=39  Identities=28%  Similarity=0.395  Sum_probs=33.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345567999999999999999999999999999998864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=7e-10  Score=51.37  Aligned_cols=37  Identities=22%  Similarity=0.374  Sum_probs=32.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4455679999999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=9.5e-10  Score=52.26  Aligned_cols=39  Identities=26%  Similarity=0.287  Sum_probs=34.2

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.5e-10  Score=53.80  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=31.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            34456788999999999888999999999888888874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.8e-10  Score=53.63  Aligned_cols=39  Identities=28%  Similarity=0.457  Sum_probs=33.0

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344567899999999999999999999999999998863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.8e-10  Score=54.86  Aligned_cols=39  Identities=23%  Similarity=0.304  Sum_probs=32.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344567899999999999999999999999999998863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.9e-10  Score=53.04  Aligned_cols=38  Identities=26%  Similarity=0.411  Sum_probs=31.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            34456789999999999999999999999999998874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.95  E-value=1.3e-10  Score=57.33  Aligned_cols=50  Identities=14%  Similarity=0.175  Sum_probs=36.6

Q ss_pred             ccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcc
Q psy13444         44 QVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        44 ~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~  100 (129)
                      +.|.... .|..|++.+      ....+|.|..|++.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~-~l~~h~~~H------~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPP-GTEKPRSRS------QSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSS-CCCCCHHHH------TSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCc-chhhHHHhc------CCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4455555 666666652      3445788888888888888888888888888876

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.95  E-value=2.8e-11  Score=53.29  Aligned_cols=31  Identities=23%  Similarity=0.533  Sum_probs=25.9

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhcccCC
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIVGK  128 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~  128 (129)
                      +||.|..||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788888888888888888888888888886

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.8e-10  Score=52.77  Aligned_cols=38  Identities=21%  Similarity=0.349  Sum_probs=32.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            34456789999999999999999999999999999874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.8e-10  Score=52.76  Aligned_cols=39  Identities=23%  Similarity=0.381  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            345567999999999999999999999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.3e-10  Score=53.32  Aligned_cols=38  Identities=21%  Similarity=0.444  Sum_probs=31.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34456788999999999999999999999999998874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1e-09  Score=51.04  Aligned_cols=37  Identities=30%  Similarity=0.548  Sum_probs=31.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||+|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3455679999999999999999999999999999877

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.1e-09  Score=51.47  Aligned_cols=38  Identities=16%  Similarity=0.170  Sum_probs=33.1

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            34456799999999999999999999999999999884

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.94  E-value=6.3e-10  Score=50.42  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=29.8

Q ss_pred             ccCCCcccCC--CCCccccCchhHHHHHHhhhccc
Q psy13444         94 HTGEKPYKCS--HCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        94 h~~~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      |++++||.|.  .||+.|...+.|..|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            6789999998  49999999999999999999875

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.93  E-value=1e-09  Score=51.03  Aligned_cols=37  Identities=19%  Similarity=0.402  Sum_probs=31.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKC  102 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c  102 (129)
                      +....+|.|..|++.|...+.|..|+++|++++||.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3455679999999999999999999999999999877

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-09  Score=52.26  Aligned_cols=40  Identities=23%  Similarity=0.449  Sum_probs=34.7

Q ss_pred             CCCccccccC--CCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         66 PGKSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        66 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      +....+|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445678997  899999999999999999999999999876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=5.7e-10  Score=53.03  Aligned_cols=38  Identities=21%  Similarity=0.272  Sum_probs=31.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccC-CCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTG-EKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~-~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3445678899999999999999999999988 8888886

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.2e-10  Score=53.51  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=32.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34556799999999999999999999999999999886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.6e-10  Score=53.02  Aligned_cols=39  Identities=28%  Similarity=0.421  Sum_probs=32.8

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSH  104 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~  104 (129)
                      +....+|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344567899999999999999999999999999998863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.5e-09  Score=51.52  Aligned_cols=34  Identities=15%  Similarity=0.254  Sum_probs=19.6

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCY   40 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~   40 (129)
                      +||+|..|++.|.. ...|..|+.+|.    ++++|.|+
T Consensus        11 k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~k~~~C~   44 (46)
T 2yto_A           11 KPYKCSDCGKAFTR-KSGLHIHQQSHT----GERHSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESS-HHHHHHHHHHHT----CCCBTTTB
T ss_pred             CCEECcccCCccCC-HhHHHHHHHHcC----CCCCCCCC
Confidence            45556666666655 555666655555    55555554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.3e-10  Score=52.94  Aligned_cols=38  Identities=21%  Similarity=0.285  Sum_probs=32.4

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34556799999999999999999999999999999874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=2.6e-10  Score=62.00  Aligned_cols=55  Identities=18%  Similarity=0.331  Sum_probs=44.6

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|..|.    ....|..|+++|.|
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            44556899999999999999999999999999999997654    45556677777776

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=7e-11  Score=64.27  Aligned_cols=53  Identities=19%  Similarity=0.323  Sum_probs=35.0

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccC
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      ++++|.|.+|++.|.... .|..|++.+.      ...+|.|..|.    ....|..|++.|.+
T Consensus        22 ~~kpy~C~~C~k~F~~~~-~L~~H~~~Ht------~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTA-ELTSHLNIHN------EEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCEECSSSCCEESSHH-HHHHHHHHHH------HHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCCEeCCHH-HHHHHHHHhC------CCCCcccchhh----hHHHHHhhhccccc
Confidence            777788888888887776 7777777632      33467776543    34455566776665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.87  E-value=4.8e-10  Score=56.89  Aligned_cols=52  Identities=12%  Similarity=0.222  Sum_probs=30.8

Q ss_pred             HHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhH
Q psy13444         22 LHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDM   87 (129)
Q Consensus        22 ~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l   87 (129)
                      .|+++|.    ++++|.|+.|++.|.... .|.   +.      +....+|.|..|++.|....++
T Consensus         4 ~h~~~H~----~~k~~~C~~C~k~F~~~~-~l~---~~------H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDST----NRASFKCPVCSSTFTDLE-ANQ---LF------DPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCC----SSSEEECSSSCCEEEHHH-HHH---HE------ETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcC----CCCCccCCCCCchhccHH-HhH---hh------cCCCCCEECCCCCCccccCccc
Confidence            3455555    667777777777776654 543   22      2334567777777776655443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.4e-09  Score=51.17  Aligned_cols=38  Identities=18%  Similarity=0.198  Sum_probs=31.9

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|.+|++.|...+.|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            34556789999999999999999999999999998763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.3e-10  Score=53.11  Aligned_cols=38  Identities=21%  Similarity=0.334  Sum_probs=31.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      +....+|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34456788888888888888888998888888888885

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.6e-09  Score=50.33  Aligned_cols=33  Identities=18%  Similarity=0.193  Sum_probs=20.1

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCcccC
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKC   39 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c   39 (129)
                      +||+|..|++.|.. ...|..|+.+|.    ++++|.|
T Consensus        10 k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~~~~~C   42 (42)
T 2en2_A           10 KPYKCETCGARFVQ-VAHLRAHVLIHT----GSGPSSG   42 (42)
T ss_dssp             CSEECTTTCCEESS-HHHHHHHTHHHH----SCCSSCC
T ss_pred             CCEeCCCcChhhCC-HHHHHHHHHHcC----CCCCCCC
Confidence            55666666666666 566666666665    5555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=2.2e-09  Score=55.04  Aligned_cols=28  Identities=18%  Similarity=0.273  Sum_probs=15.3

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            4455555555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.84  E-value=2.7e-09  Score=45.57  Aligned_cols=30  Identities=33%  Similarity=0.714  Sum_probs=24.8

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      +||.|..|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888888888888888888888888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.7e-10  Score=60.11  Aligned_cols=65  Identities=28%  Similarity=0.362  Sum_probs=51.3

Q ss_pred             HHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         20 LILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        20 l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      |..|+..+.    +.+++.|..|++.|. .. .|..|+..|+.       .++.|+.|++.|. ...|..|++++++++
T Consensus         5 L~~H~~~~c----~~r~~~C~~C~~~~~-~~-~L~~H~~~c~~-------~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETEC----PLRLAVCQHCDLELS-IL-KLKEHEDYCGA-------RTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCC----CCCCEECSSSCCEEC-HH-HHHHHHHHHHH-------CEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccC----CCcccCCcccChHhh-HH-HHHHHHhHcCC-------CceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            455666666    889999999999995 44 89999866544       5789999999876 588899999888764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.83  E-value=1.7e-09  Score=46.22  Aligned_cols=30  Identities=27%  Similarity=0.510  Sum_probs=24.2

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ++||.|..|++.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            467888888888888888888888887764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.82  E-value=3.5e-09  Score=46.12  Aligned_cols=30  Identities=33%  Similarity=0.778  Sum_probs=25.0

Q ss_pred             CCcccCC--CCCccccCchhHHHHHHhhhccc
Q psy13444         97 EKPYKCS--HCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        97 ~k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4688888  78888888888888888888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.81  E-value=2.6e-09  Score=45.37  Aligned_cols=29  Identities=21%  Similarity=0.458  Sum_probs=23.1

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|..||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.80  E-value=3.9e-09  Score=44.66  Aligned_cols=29  Identities=31%  Similarity=0.477  Sum_probs=24.0

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888888764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.78  E-value=4.4e-09  Score=44.59  Aligned_cols=29  Identities=28%  Similarity=0.511  Sum_probs=22.2

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46778888888888888888888877653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=8.1e-09  Score=52.99  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=26.8

Q ss_pred             CCcccccc--cccccCCcHHHHHHHH-hhhcccCCCCCcccCcc
Q psy13444          1 MKDVFCYH--CNLTLPSSTEALILHS-KICSAVNRPDNKLKCYH   41 (129)
Q Consensus         1 ~k~~~c~~--c~~~f~~~~~~l~~h~-~~~~~~~~~~~~~~c~~   41 (129)
                      +|||+|.+  |++.|.. ...|..|+ ++|+    +++|+.|.+
T Consensus        25 EKPYkC~~~~CgKaFsr-~s~L~~H~rriHT----gEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTI-QQNLILHYQAVHK----SDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCBCSS-HHHHHHHHHHHSS----SCCCCCCCS
T ss_pred             CCCeECCCCCcChhHcC-HHHHHHHhhhhCC----CCCCccccc
Confidence            57788864  8888888 78888886 5777    777777754

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.77  E-value=8.6e-09  Score=45.34  Aligned_cols=32  Identities=13%  Similarity=0.183  Sum_probs=29.2

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhcccCCCCCccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLK   38 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~   38 (129)
                      |||.|..|++.|.. ...|..|+.+|.    ++++|.
T Consensus         1 kp~~C~~C~k~F~~-~~~L~~H~~~H~----~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMR-SDHLSKHITLHE----LLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSS-HHHHHHHHHHHT----TTCCCC
T ss_pred             CcccCCCCCchhCC-HHHHHHHHHHhC----CCCCCC
Confidence            68999999999999 999999999998    888774

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.77  E-value=4.4e-09  Score=44.54  Aligned_cols=29  Identities=41%  Similarity=0.721  Sum_probs=23.6

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46888888888888888888888888764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.75  E-value=4.8e-09  Score=45.36  Aligned_cols=29  Identities=34%  Similarity=0.706  Sum_probs=21.4

Q ss_pred             CcccCC--CCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCS--HCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|.  .||+.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467776  77777777777777777777653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.74  E-value=8.4e-09  Score=47.07  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=27.8

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccC
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKC   39 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c   39 (129)
                      ++||+|..|++.|.. ...|..|+.+|.    ++++|.+
T Consensus         4 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~----~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRS-AQALGGHMNVHR----RDRARLR   37 (39)
T ss_dssp             SSSEECTTTCCEESS-HHHHHHHHHTTC----CSCTTTT
T ss_pred             CCceECCCCCcccCC-HHHHHHHHHHcC----CCcccee
Confidence            478888888888888 888888888887    7777765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=1.3e-09  Score=46.67  Aligned_cols=30  Identities=37%  Similarity=0.637  Sum_probs=24.4

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ++||.|..||+.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            367888888888888888888888887764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.72  E-value=4.5e-09  Score=44.28  Aligned_cols=28  Identities=32%  Similarity=0.731  Sum_probs=22.3

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      ++||.|..|++.|...+.|..|+++|+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678888888888888888888887754

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=1.3e-09  Score=46.39  Aligned_cols=29  Identities=28%  Similarity=0.494  Sum_probs=23.1

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|..||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46788888888888888888888887764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.69  E-value=8.3e-09  Score=43.09  Aligned_cols=27  Identities=30%  Similarity=0.659  Sum_probs=22.2

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhh
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      ++||.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468888888888888888888888763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=7.2e-09  Score=46.67  Aligned_cols=27  Identities=19%  Similarity=0.347  Sum_probs=20.9

Q ss_pred             ccCCCcccCCCCCccccCchhHHHHHH
Q psy13444         94 HTGEKPYKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus        94 h~~~k~~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      +.|++||.|..|||+|.+.+.|.+|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            457788888888888888888888873

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.65  E-value=6.6e-09  Score=43.49  Aligned_cols=26  Identities=27%  Similarity=0.572  Sum_probs=21.1

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhh
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~  122 (129)
                      ++||.|..||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46788888888888888888888776

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.63  E-value=1.3e-08  Score=42.38  Aligned_cols=26  Identities=31%  Similarity=0.698  Sum_probs=16.4

Q ss_pred             cccCCCCCccccCchhHHHHHHhhhc
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45666666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.63  E-value=1.3e-08  Score=43.44  Aligned_cols=28  Identities=32%  Similarity=0.515  Sum_probs=19.8

Q ss_pred             CcccCCCCCccccCchhHHHH-HHhhhcc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRH-MRIKHKI  125 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h-~~~~~~~  125 (129)
                      +||.|..|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367777777777777777777 5666665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.59  E-value=4.8e-08  Score=43.15  Aligned_cols=32  Identities=25%  Similarity=0.506  Sum_probs=24.1

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhhccCCCc
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      ...+|.|..|++.|...+.|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            34567888888888888888888888877764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.57  E-value=6e-08  Score=42.92  Aligned_cols=32  Identities=25%  Similarity=0.496  Sum_probs=23.9

Q ss_pred             CccccccCCCCCcCCChhhHHHHhhhccCCCc
Q psy13444         68 KSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKP   99 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~   99 (129)
                      ...+|.|..|++.|...+.|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            34567788888888888888888888777664

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.53  E-value=4.4e-09  Score=45.95  Aligned_cols=30  Identities=13%  Similarity=0.280  Sum_probs=27.3

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~  100 (129)
                      +|.|..|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            578999999999999999999999999886

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=7.9e-08  Score=43.06  Aligned_cols=26  Identities=15%  Similarity=0.292  Sum_probs=12.5

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|..|++.|.. ...|..|+.+|.
T Consensus         8 k~~~C~~C~k~f~~-~~~l~~H~~~h~   33 (37)
T 2elo_A            8 RSYSCPVCEKSFSE-DRLIKSHIKTNH   33 (37)
T ss_dssp             CCCEETTTTEECSS-HHHHHHHHHHHC
T ss_pred             CCcCCCCCCCccCC-HHHHHHHHHHHc
Confidence            34444444444444 444444444444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.91  E-value=1.2e-08  Score=42.15  Aligned_cols=26  Identities=38%  Similarity=0.839  Sum_probs=20.7

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhh
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      +||.|..||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888888888888888888887763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=7.9e-08  Score=39.91  Aligned_cols=26  Identities=19%  Similarity=0.220  Sum_probs=21.3

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhh
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~   27 (129)
                      ++||+|..|++.|.. ...|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~-~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRD-FSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESS-HHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCC-HHHHHHHHHHc
Confidence            578888888888888 88888888765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=1.1e-07  Score=40.21  Aligned_cols=27  Identities=19%  Similarity=0.331  Sum_probs=23.8

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++||.|..|++.|.. ...|..|+.+|.
T Consensus         1 ~k~~~C~~C~~~f~~-~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSD-PTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESC-HHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCC-HHHHHHHHHHhc
Confidence            578999999999999 899999988887

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.48  E-value=7.7e-08  Score=43.22  Aligned_cols=24  Identities=25%  Similarity=0.434  Sum_probs=16.3

Q ss_pred             CCCcccCccccccccCchhhHHHHH
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHS   57 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~   57 (129)
                      +++||.|++|++.|.... .|.+|+
T Consensus         5 gekp~~C~~CgK~F~~~s-~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPS-TLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHH-HHHHHH
T ss_pred             CccCeECCCCCCccCCHh-HccCcC
Confidence            566666777777776666 666666

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=6.6e-08  Score=40.26  Aligned_cols=26  Identities=19%  Similarity=0.248  Sum_probs=20.8

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhh
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~   27 (129)
                      ++||+|..|++.|.. ...|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~-~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPS-LASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESC-HHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCC-HHHHHHHHHhc
Confidence            578888888888888 78888887765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.2e-07  Score=43.13  Aligned_cols=27  Identities=22%  Similarity=0.338  Sum_probs=14.4

Q ss_pred             CCcccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +|||+|..  |++.|.. ...|..|+++|.
T Consensus         7 ekp~~C~~~~C~k~F~~-~~~L~~H~r~Ht   35 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPD-KYKLQAHLKVHT   35 (38)
T ss_dssp             CCCEECSSSSCCCEESC-HHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCccCC-HHHHHHHHHhcC
Confidence            34555543  5555555 555555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=2.7e-07  Score=40.92  Aligned_cols=26  Identities=23%  Similarity=0.396  Sum_probs=13.5

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++|+|..|++.|.. ...|..|+.+|.
T Consensus         8 ~~~~C~~C~k~f~~-~~~l~~H~~~H~   33 (36)
T 2elr_A            8 KTHLCDMCGKKFKS-KGTLKSHKLLHT   33 (36)
T ss_dssp             SSCBCTTTCCBCSS-HHHHHHHHHHHS
T ss_pred             CCeecCcCCCCcCc-hHHHHHHHHHhc
Confidence            44555555555555 455555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=1.9e-07  Score=42.01  Aligned_cols=32  Identities=19%  Similarity=0.345  Sum_probs=24.3

Q ss_pred             CCccccc--ccccccCCcHHHHHHHHhhhcccCCCCCcc
Q psy13444          1 MKDVFCY--HCNLTLPSSTEALILHSKICSAVNRPDNKL   37 (129)
Q Consensus         1 ~k~~~c~--~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~   37 (129)
                      ++||+|.  .|++.|.. ...|..|+++|.    ++++|
T Consensus         4 ~k~~~C~~~~C~k~f~~-~~~L~~H~~~H~----~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTN-EDHLAVHKHKHE----MTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESS-HHHHHHHHHHHH----TTTTT
T ss_pred             CcceECCCCCCCcccCC-HHHHHHHHHHhC----CCCCC
Confidence            4678888  58888888 788888888877    66665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.42  E-value=3e-07  Score=38.56  Aligned_cols=26  Identities=19%  Similarity=0.391  Sum_probs=23.2

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||.|..|++.|.. ...|..|+.+|.
T Consensus         1 k~~~C~~C~~~f~~-~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFAR-QEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSS-HHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCC-HHHHHHHHHHhc
Confidence            58899999999999 899999998887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.42  E-value=1e-07  Score=40.12  Aligned_cols=27  Identities=30%  Similarity=0.584  Sum_probs=20.6

Q ss_pred             CcccCC--CCCccccCchhHHHHHHhhhc
Q psy13444         98 KPYKCS--HCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        98 k~~~c~--~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      +||.|.  .|++.|...+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467777  888888888888888877754

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=1.7e-07  Score=39.15  Aligned_cols=27  Identities=15%  Similarity=0.360  Sum_probs=22.3

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++||+|..|++.|.. ...|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~-~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSL-KHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESC-HHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCC-HHHHHHHHHhcC
Confidence            578888888888888 888888887765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.1e-07  Score=41.36  Aligned_cols=26  Identities=15%  Similarity=0.226  Sum_probs=13.4

Q ss_pred             CCCcccCccccccccCchhhHHHHHhh
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      ++++|.|..|++.|.... .|..|++.
T Consensus         6 ~~k~~~C~~C~k~f~~~~-~l~~H~~~   31 (36)
T 2elv_A            6 SGLLYDCHICERKFKNEL-DRDRHMLV   31 (36)
T ss_dssp             CCCCEECSSSCCEESSHH-HHHHHHTT
T ss_pred             CCCCeECCCCCCccCCHH-HHHHHHHH
Confidence            445555555555555554 55555543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.5e-07  Score=41.01  Aligned_cols=25  Identities=24%  Similarity=0.428  Sum_probs=12.7

Q ss_pred             CCCcccCccccccccCchhhHHHHHh
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSR   58 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~   58 (129)
                      ++++|.|..|++.|.... .|..|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~-~l~~H~~   30 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKA-NLNVHLR   30 (36)
T ss_dssp             CCCSEECSSSSCEESSHH-HHHHHHH
T ss_pred             CCCCCCCCCCCcccCCHH-HHHHHHH
Confidence            444555555555555544 5555544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.6e-07  Score=41.04  Aligned_cols=26  Identities=27%  Similarity=0.373  Sum_probs=13.4

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|..|++.|.. ...|..|+++|.
T Consensus         8 k~~~C~~C~k~f~~-~~~l~~H~~~H~   33 (36)
T 2els_A            8 KIFTCEYCNKVFKF-KHSLQAHLRIHT   33 (36)
T ss_dssp             CCEECTTTCCEESS-HHHHHHHHHHHC
T ss_pred             CCEECCCCCceeCC-HHHHHHHHHHhC
Confidence            44555555555555 455555555444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.39  E-value=1.8e-07  Score=39.30  Aligned_cols=26  Identities=19%  Similarity=0.351  Sum_probs=22.1

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||.|..|++.|.. ...|..|+.+|.
T Consensus         1 k~~~C~~C~k~f~~-~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMR-SDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESC-SHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCC-HHHHHHHHHHhc
Confidence            57888888888888 788888888876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=3.3e-07  Score=39.51  Aligned_cols=27  Identities=22%  Similarity=0.340  Sum_probs=23.4

Q ss_pred             CCccccc--ccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCY--HCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~--~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++||.|.  .|++.|.. ...|..|+.+|.
T Consensus         1 ek~~~C~~~~C~k~f~~-~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVR-NHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSS-SHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCC-HHHHHHHHHHcc
Confidence            5789998  89999988 888999988887

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.7e-07  Score=40.97  Aligned_cols=26  Identities=23%  Similarity=0.431  Sum_probs=14.1

Q ss_pred             CCCcccCccccccccCchhhHHHHHhh
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      ++++|+|.+|++.|.... .|..|++.
T Consensus         6 ~~k~~~C~~C~k~f~~~~-~l~~H~~~   31 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKS-NLKAHMNR   31 (36)
T ss_dssp             CCCSEECSSSSCEESCHH-HHHHHHHH
T ss_pred             CCCCccCCCCCchhCCHH-HHHHHHHH
Confidence            455555555555555554 55555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.38  E-value=2.8e-07  Score=41.18  Aligned_cols=27  Identities=19%  Similarity=0.317  Sum_probs=13.3

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccC
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      .+|.|+.|++.|.....|..|+++|++
T Consensus        10 k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            344555555555555555555554443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=3.3e-07  Score=38.68  Aligned_cols=26  Identities=23%  Similarity=0.332  Sum_probs=22.4

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||.|..|++.|.. ...|..|+.+|.
T Consensus         1 k~~~C~~C~k~f~~-~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSAD-SSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSC-SHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCC-HHHHHHHHHHHc
Confidence            57889999999988 788999988887

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.35  E-value=3.8e-07  Score=37.60  Aligned_cols=26  Identities=27%  Similarity=0.698  Sum_probs=21.5

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      |.|..|++.|.....|..|+++|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            67888999998888888888888763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=3.3e-07  Score=38.36  Aligned_cols=26  Identities=23%  Similarity=0.409  Sum_probs=23.1

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|..|++.|.. ...|..|+.+|.
T Consensus         1 ~~~~C~~C~k~f~~-~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTT-SGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESC-HHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCC-hhHHHHHHHHhc
Confidence            58899999999999 899999998887

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=2.8e-07  Score=38.60  Aligned_cols=26  Identities=31%  Similarity=0.457  Sum_probs=21.8

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||.|..|++.|.. ...|..|+.+|.
T Consensus         1 k~~~C~~C~~~f~~-~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQ-VGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCT-TTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCC-HHHHHHHHHHhc
Confidence            57888888888888 788888888876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.8e-07  Score=40.75  Aligned_cols=30  Identities=27%  Similarity=0.589  Sum_probs=19.8

Q ss_pred             CccccccCCCCCcCCCh-hhHHHHhhhccCC
Q psy13444         68 KSFNYVCCLCDYNVNGR-TDMKRHLQTHTGE   97 (129)
Q Consensus        68 ~~~~~~c~~c~~~~~~~-~~l~~h~~~h~~~   97 (129)
                      ...+|.|+.|++.|... +.|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34456777777777776 6777777766655

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.32  E-value=6e-07  Score=38.38  Aligned_cols=26  Identities=15%  Similarity=0.451  Sum_probs=22.9

Q ss_pred             Cccccc--ccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCY--HCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~--~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|.  .|++.|.. ...|..|+++|.
T Consensus         1 kp~~C~~~~C~k~f~~-~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTR-SDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSS-HHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCC-HhHHHHHHHHhc
Confidence            588997  89999999 899999998887

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=8e-08  Score=40.78  Aligned_cols=27  Identities=33%  Similarity=0.604  Sum_probs=22.4

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++||+|..|++.|.. ...|..|+.+|.
T Consensus         1 ~k~~~C~~C~k~f~~-~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFAD-PGALQRHVRIHT   27 (30)
Confidence            578888888888888 788888888776

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=6.9e-07  Score=45.66  Aligned_cols=27  Identities=15%  Similarity=0.178  Sum_probs=15.9

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +|||+|.+|++.|.. ...|..|+++|.
T Consensus        11 ekpy~C~~CgK~F~~-~s~L~~H~r~Ht   37 (66)
T 2epp_A           11 AGILPCGLCGKVFTD-ANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCTTTCCCCSC-HHHHHHHHHHHT
T ss_pred             ccCcCCCCCCCccCC-HHHHHhhhhhhC
Confidence            355666666666666 556666666555

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.4e-07  Score=39.80  Aligned_cols=26  Identities=23%  Similarity=0.468  Sum_probs=21.3

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|..|++.|.. ...|..|+.+|.
T Consensus         1 k~~~C~~C~k~f~~-~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQ-ASSLIAHVRQHT   26 (29)
Confidence            57888888888888 788888888776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.23  E-value=7.7e-07  Score=39.82  Aligned_cols=31  Identities=29%  Similarity=0.527  Sum_probs=22.4

Q ss_pred             CccccccC--CCCCcCCChhhHHHHhhhccCCC
Q psy13444         68 KSFNYVCC--LCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        68 ~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      ...+|.|.  .|++.|...+.|..|+++|++++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            44567777  38888888888888887777653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=1.5e-07  Score=38.64  Aligned_cols=25  Identities=20%  Similarity=0.348  Sum_probs=17.8

Q ss_pred             CcccccccccccCCcHHHHHHHHhhh
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~   27 (129)
                      |||+|..|++.|.. ...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~-~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQ-SSQLANHIRHH   25 (26)
Confidence            46777777777777 67777776654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.5e-07  Score=39.85  Aligned_cols=26  Identities=19%  Similarity=0.227  Sum_probs=18.0

Q ss_pred             CCCcccCccccccccCchhhHHHH-Hhh
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFH-SRK   59 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h-~~~   59 (129)
                      +++||.|..|++.|.... .|..| ++.
T Consensus         6 ~~k~~~C~~C~k~f~~~~-~L~~H~~~~   32 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKN-CLKRHVIQK   32 (37)
T ss_dssp             SSCEEECSSSSCEEECHH-HHHHHHHHH
T ss_pred             CCcCeECCCCCcccCCHH-HHHHHHHHH
Confidence            667777777777777766 77777 544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=8.7e-07  Score=37.40  Aligned_cols=26  Identities=38%  Similarity=0.540  Sum_probs=20.8

Q ss_pred             CcccccccccccCCcHHHHHHH-Hhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILH-SKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h-~~~~~   28 (129)
                      +||.|..|++.|.. ...|..| +.+|.
T Consensus         1 k~~~C~~C~k~f~~-~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTR-RDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSS-SHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCC-hHHHHHHHHHHcc
Confidence            57888888888888 7888888 67776

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.20  E-value=8.6e-07  Score=42.21  Aligned_cols=26  Identities=19%  Similarity=0.207  Sum_probs=13.3

Q ss_pred             CcccccccccccCCcHHHHHHHHh-hhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSK-ICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~-~~~   28 (129)
                      |||+|..|++.|.. ...|..|++ +|.
T Consensus         6 kp~~C~~C~k~F~~-~~~L~~H~~~~H~   32 (48)
T 3iuf_A            6 KPYACDICGKRYKN-RPGLSYHYAHSHL   32 (48)
T ss_dssp             SCEECTTTCCEESS-HHHHHHHHHHSSC
T ss_pred             cCEECCCcCcccCC-HHHHHHHhhhhcC
Confidence            44555555555555 455555554 444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.02  E-value=3.6e-06  Score=35.01  Aligned_cols=26  Identities=23%  Similarity=0.390  Sum_probs=21.6

Q ss_pred             Cccccc--ccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCY--HCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~--~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ++|+|.  .|++.|.. ...|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~-~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFND-RRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESS-HHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCC-HHHHHHHHHHhC
Confidence            578888  88888888 888888888775

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.94  E-value=2.7e-05  Score=39.38  Aligned_cols=50  Identities=22%  Similarity=0.533  Sum_probs=39.8

Q ss_pred             cCCCCCcCCChhhHHHHh-hhccCCC------cccCC--CCCccccCchhHHHHHHhhh
Q psy13444         74 CCLCDYNVNGRTDMKRHL-QTHTGEK------PYKCS--HCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        74 c~~c~~~~~~~~~l~~h~-~~h~~~k------~~~c~--~C~k~f~~~~~l~~h~~~~~  123 (129)
                      ...|++.|.....|..|+ ..|.+.+      +|.|.  .|+..+.....|..|+++.|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            345888999999999997 4687665      68886  79888888888999988754

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=5.3e-06  Score=39.12  Aligned_cols=28  Identities=25%  Similarity=0.553  Sum_probs=15.4

Q ss_pred             cccccC--CCCCcCCChhhHHHHhhhccCC
Q psy13444         70 FNYVCC--LCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        70 ~~~~c~--~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      .+|.|.  .|++.|...+.|..|+++|+++
T Consensus        17 k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           17 KTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345553  4555555555555555555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.52  E-value=1.6e-05  Score=45.42  Aligned_cols=30  Identities=27%  Similarity=0.433  Sum_probs=25.6

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHh
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRI  121 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~  121 (129)
                      ..|+|++||.|..|++.|...+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            447888899999999999999999998875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.18  E-value=0.00049  Score=41.46  Aligned_cols=77  Identities=14%  Similarity=0.246  Sum_probs=55.0

Q ss_pred             cccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHH
Q psy13444         41 HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus        41 ~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      -|+......  .+..|...|..       .+..|+.|+..+ .+..|..|....-..++-.|..|+..+. ...+..|+.
T Consensus        89 GC~~~~~~~--~l~~H~~~C~~-------~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~  157 (170)
T 3hcs_A           89 GCLHKMELR--HLEDHQAHCEF-------ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQ  157 (170)
T ss_dssp             TCCCEEEGG--GHHHHHTTCTT-------SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHT
T ss_pred             CCCceecHh--HHHHHHhcCCc-------eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHH
Confidence            455444432  67777776544       246789999887 5667899998888888899999988764 467899999


Q ss_pred             hhhcccCC
Q psy13444        121 IKHKIVGK  128 (129)
Q Consensus       121 ~~~~~~~~  128 (129)
                      ++.|+.++
T Consensus       158 ~~~~~~~~  165 (170)
T 3hcs_A          158 NCPLALEH  165 (170)
T ss_dssp             TCCC----
T ss_pred             hCcChhhh
Confidence            99998764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.00095  Score=33.58  Aligned_cols=50  Identities=18%  Similarity=0.214  Sum_probs=30.9

Q ss_pred             cccccccCCcHHHHHHHHh-hhcccCC--CCCcccCc--cccccccCchhhHHHHHh
Q psy13444          7 YHCNLTLPSSTEALILHSK-ICSAVNR--PDNKLKCY--HCKQVLSSSMDDLLFHSR   58 (129)
Q Consensus         7 ~~c~~~f~~~~~~l~~h~~-~~~~~~~--~~~~~~c~--~c~~~f~~~~~~l~~h~~   58 (129)
                      ..|++.|.. ...|..|+. .|.....  ...+|.|.  .|+..+.... .|..|++
T Consensus         7 ~~C~~~f~~-~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~-~L~~Hir   61 (64)
T 1zw8_A            7 KECPESASS-LFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTA-SIVNHIN   61 (64)
T ss_dssp             TTCCCCCSS-HHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHH-HHHHHHH
T ss_pred             CCCCCcCCC-HHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChH-HHHhhcc
Confidence            347888888 888888874 5652110  01256674  6776666665 7777765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.74  E-value=0.0011  Score=30.90  Aligned_cols=22  Identities=23%  Similarity=0.422  Sum_probs=11.1

Q ss_pred             cccCCCCCccccCchhHHHHHH
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      ++.|+.|+..|....+|+.|++
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            3445555555555555555544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.88  E-value=0.0027  Score=36.18  Aligned_cols=25  Identities=16%  Similarity=0.131  Sum_probs=18.7

Q ss_pred             CCcccccccccccCCcHHHHHHHHhh
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKI   26 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~   26 (129)
                      +++|.|..|++.|.. ...|..|++.
T Consensus        48 ekpfyC~~C~K~F~~-~~~L~~H~rs   72 (124)
T 1zr9_A           48 GGLHRCLACARYFID-STNLKTHFRS   72 (124)
T ss_dssp             GGCSEETTTTEECSS-HHHHHHHTTC
T ss_pred             CcceEcccCcchhCC-HHHHHHHHhh
Confidence            367788888888888 7888887654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.78  E-value=0.014  Score=27.20  Aligned_cols=24  Identities=17%  Similarity=0.216  Sum_probs=18.8

Q ss_pred             CcccCccccccccCchhhHHHHHhh
Q psy13444         35 NKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus        35 ~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      .++.|+.|+..|.... .|..||.-
T Consensus        11 ~~~~CPrCn~~f~~~~-sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTE-ALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHH-HHHHHHHH
T ss_pred             CceeCCcccccccchH-HHHhhhhh
Confidence            5677888888888776 88888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.60  E-value=0.012  Score=33.73  Aligned_cols=77  Identities=17%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             CCcccCccccccccCchhhHHHHHh--hcccccCCCCcccccc------CCCCCcCCChhhHHHHhhhccCCCcccCCCC
Q psy13444         34 DNKLKCYHCKQVLSSSMDDLLFHSR--KCAVVWRPGKSFNYVC------CLCDYNVNGRTDMKRHLQTHTGEKPYKCSHC  105 (129)
Q Consensus        34 ~~~~~c~~c~~~f~~~~~~l~~h~~--~c~~~~~~~~~~~~~c------~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C  105 (129)
                      .+++.|..|...|.+.. .+..|..  .+...     ...+.+      +.-+..+....    +...+.+.+.|-|..|
T Consensus        30 ~~~~~C~~C~v~~~S~s-~~~~H~~gkkH~~~-----v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C   99 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISES-QKLAHYQSRKHANK-----VRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVC   99 (127)
T ss_dssp             BCSSEETTTTEECCSHH-HHHHHHHCHHHHHH-----HHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTT
T ss_pred             CCCCcCcCCCCEeCCHH-HHHHHHCcHHHHHH-----HHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCC
Confidence            45678999999999987 8888885  11110     000111      00112222111    2233556677899999


Q ss_pred             CccccCchhHHHHHH
Q psy13444        106 GYETLRSHDLKRHMR  120 (129)
Q Consensus       106 ~k~f~~~~~l~~h~~  120 (129)
                      ++.|.....+.+|..
T Consensus       100 ~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A          100 NMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEECSSHHHHHHHHT
T ss_pred             CCEeCCHHHHHHHHC
Confidence            999999999999976

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.44  E-value=0.016  Score=33.26  Aligned_cols=77  Identities=13%  Similarity=0.210  Sum_probs=46.1

Q ss_pred             CcccccccccccCCcHHHHHHHH--hhhcccCCCCCcccCc------cccccccCchhhHHHHHhhcccccCCCCccccc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHS--KICSAVNRPDNKLKCY------HCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYV   73 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~--~~~~~~~~~~~~~~c~------~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~   73 (129)
                      +++.|..|+..|.+ ...+..|.  ..|..   ..+.+.+.      .-++.+....     +.   ..   ......+-
T Consensus        31 ~~~~C~~C~v~~~S-~s~~~~H~~gkkH~~---~v~~~~~~~~~~~~~~~~~~~~~~-----~~---~~---~~~~~~~~   95 (127)
T 1zu1_A           31 SDTQCKVCSAVLIS-ESQKLAHYQSRKHAN---KVRRYMAINQGEDSVPAKKFKAAP-----AE---IS---DGEDRSKC   95 (127)
T ss_dssp             CSSEETTTTEECCS-HHHHHHHHHCHHHHH---HHHHHHHHTTCCCCCSCCCCSCCS-----SC---CS---SCCCTTTE
T ss_pred             CCCcCcCCCCEeCC-HHHHHHHHCcHHHHH---HHHHHhcccCcccCCCCCccCCCc-----cc---cc---cCCCCCeE
Confidence            56789999999999 99999997  44431   00111110      0011121111     00   00   22334588


Q ss_pred             cCCCCCcCCChhhHHHHhhh
Q psy13444         74 CCLCDYNVNGRTDMKRHLQT   93 (129)
Q Consensus        74 c~~c~~~~~~~~~l~~h~~~   93 (129)
                      |..|...|.....+..|...
T Consensus        96 C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           96 CPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             ETTTTEECSSHHHHHHHHTS
T ss_pred             cCCCCCEeCCHHHHHHHHCC
Confidence            99999999999988888753

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=93.66  E-value=0.11  Score=22.71  Aligned_cols=25  Identities=12%  Similarity=0.560  Sum_probs=17.6

Q ss_pred             cccccccccccCCcHHHHHHHHhhhc
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      .+.|..|+..|.. ..++..|.....
T Consensus         8 ~~~C~~C~IsF~~-l~ty~aHKk~YC   32 (36)
T 1fu9_A            8 KKYCSTCDISFNY-VKTYLAHKQFYC   32 (36)
T ss_dssp             CSEETTTTEECSS-HHHHHHHHHHTS
T ss_pred             cCeeccccceehh-hHHHhhhheecC
Confidence            4667777777777 777777766543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.22  E-value=0.058  Score=28.05  Aligned_cols=49  Identities=20%  Similarity=0.435  Sum_probs=29.9

Q ss_pred             cccCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCcCCChhhHHHHhhh
Q psy13444         36 KLKCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQT   93 (129)
Q Consensus        36 ~~~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   93 (129)
                      .|.|..||..+.-.  .+..|...|      .....+.|..|+..|.. ...+.|...
T Consensus        10 ~F~C~~Cgd~lKK~--kv~~H~~~C------r~~~~~SCIDC~~~F~~-~~y~~HtsC   58 (79)
T 1wjv_A           10 FFTCNACGESVKKI--QVEKHVSNC------RNCECLSCIDCGKDFWG-DDYKSHVKC   58 (79)
T ss_dssp             EEEESSSCCEEETT--HHHHHHHHC------TTCCEEEETTTTEEEEG-GGTTTCCCC
T ss_pred             EEEcCCCCCeeecc--cchhHHhhC------CCCCcEEecccCCeeCC-CCEeCEeee
Confidence            36677777666554  677777664      33334777778777764 334455433

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.68  E-value=0.066  Score=27.84  Aligned_cols=47  Identities=19%  Similarity=0.320  Sum_probs=29.1

Q ss_pred             cccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHH
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHS   57 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~   57 (129)
                      .|.|..|+.++..  ..|..|.....    +...+.|-.|++.|...  ....|.
T Consensus        10 ~F~C~~Cgd~lKK--~kv~~H~~~Cr----~~~~~SCIDC~~~F~~~--~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVKK--IQVEKHVSNCR----NCECLSCIDCGKDFWGD--DYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEET--THHHHHHHHCT----TCCEEEETTTTEEEEGG--GTTTCC
T ss_pred             EEEcCCCCCeeec--ccchhHHhhCC----CCCcEEecccCCeeCCC--CEeCEe
Confidence            3677777777655  45777765544    44456777777777653  444443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=91.25  E-value=0.097  Score=27.80  Aligned_cols=26  Identities=38%  Similarity=0.668  Sum_probs=16.9

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCCCcc
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGEKPY  100 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~k~~  100 (129)
                      .+|-+||+.|.   .|.+|+..+.|-.|.
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpe   47 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPE   47 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHH
Confidence            56777777666   355777776666653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.22  E-value=0.14  Score=30.55  Aligned_cols=76  Identities=16%  Similarity=0.193  Sum_probs=51.2

Q ss_pred             ccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHh-hcccccCCCCccccccCCCCCcCCChhh
Q psy13444          8 HCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVCCLCDYNVNGRTD   86 (129)
Q Consensus         8 ~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c~~c~~~~~~~~~   86 (129)
                      -|+....  ...+..|... -    .-.+..|+.|+..+...  .|..|.. .|..       ..-.|+.|+..+. ...
T Consensus        89 GC~~~~~--~~~l~~H~~~-C----~~~~v~C~~C~~~~~r~--~l~~H~~~~C~~-------r~~~C~~C~~~~~-~~~  151 (170)
T 3hcs_A           89 GCLHKME--LRHLEDHQAH-C----EFALMDCPQCQRPFQKF--HINIHILKDCPR-------RQVSCDNCAASMA-FED  151 (170)
T ss_dssp             TCCCEEE--GGGHHHHHTT-C----TTSEEECTTTCCEEEGG--GHHHHHHHTCTT-------CEEECTTTCCEEE-GGG
T ss_pred             CCCceec--HhHHHHHHhc-C----CceeeECCCCChHHHHH--HHHHHhhhhCCC-------CCeECCCCCCccC-HHH
Confidence            3554433  3567788643 3    34667899999888554  7999995 6543       3467999998876 457


Q ss_pred             HHHHhhhccCCCcc
Q psy13444         87 MKRHLQTHTGEKPY  100 (129)
Q Consensus        87 l~~h~~~h~~~k~~  100 (129)
                      +..|..++.|+.++
T Consensus       152 l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          152 KEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHHHTTCCC----
T ss_pred             HHhHHHhCcChhhh
Confidence            89999999998764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.94  E-value=0.19  Score=21.70  Aligned_cols=24  Identities=21%  Similarity=0.467  Sum_probs=15.9

Q ss_pred             ccCCCCCccccCchhHHHHHHhhh
Q psy13444        100 YKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      |.|+.|.+.|.....|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            667777777777777777765433

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=89.89  E-value=0.23  Score=27.32  Aligned_cols=13  Identities=23%  Similarity=0.519  Sum_probs=10.6

Q ss_pred             CCcccCccccccc
Q psy13444         34 DNKLKCYHCKQVL   46 (129)
Q Consensus        34 ~~~~~c~~c~~~f   46 (129)
                      -.++.|..||..|
T Consensus        65 v~p~~C~~CG~~F   77 (105)
T 2gmg_A           65 IKPAQCRKCGFVF   77 (105)
T ss_dssp             ECCCBBTTTCCBC
T ss_pred             EECcChhhCcCee
Confidence            3567899999988

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=89.40  E-value=0.14  Score=31.78  Aligned_cols=25  Identities=32%  Similarity=0.552  Sum_probs=19.9

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      ..|.|..||..+..             +.|+.|+.||.
T Consensus       170 ~~~~C~~CG~i~~g-------------~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHKG-------------EDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEES-------------SCCSBCTTTCC
T ss_pred             cEEEECCCCCEEcC-------------cCCCCCCCCCC
Confidence            35999999998752             46799999984

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=88.59  E-value=0.075  Score=27.26  Aligned_cols=48  Identities=27%  Similarity=0.546  Sum_probs=29.8

Q ss_pred             CcccC-ccccccccCchhhHHHHHh-hcccccCCCCccccccCCCCCcCCChhhHHHHhh
Q psy13444         35 NKLKC-YHCKQVLSSSMDDLLFHSR-KCAVVWRPGKSFNYVCCLCDYNVNGRTDMKRHLQ   92 (129)
Q Consensus        35 ~~~~c-~~c~~~f~~~~~~l~~h~~-~c~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~   92 (129)
                      .+..| ..|+..+...  .|..|.. .|..       ....|..|+..+.. ..|..|..
T Consensus        15 ~~v~C~~~C~~~v~r~--~l~~H~~~~C~~-------r~v~C~~C~~~~~~-~~l~~H~~   64 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSRR--DLPAHLQHDCPK-------RRLKCEFCGCDFSG-EAYESHEG   64 (76)
T ss_dssp             SCCBCTTCCSCBCCSS--SSTTTTTTSCTT-------SCCCCSSSCCCCCH-HHHHHTTT
T ss_pred             cccCCCccccHHhhHh--HHHhhCHhhCCC-------cceECCCCCCccCH-HHHHHHHh
Confidence            34457 4677766654  6777776 5443       24678888777653 45666663

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=87.02  E-value=0.24  Score=22.98  Aligned_cols=12  Identities=42%  Similarity=1.179  Sum_probs=7.9

Q ss_pred             cccCCCCCcCCC
Q psy13444         72 YVCCLCDYNVNG   83 (129)
Q Consensus        72 ~~c~~c~~~~~~   83 (129)
                      |+|..||..+..
T Consensus         5 y~C~vCGyvyd~   16 (46)
T 6rxn_A            5 YVCNVCGYEYDP   16 (46)
T ss_dssp             EEETTTCCEECG
T ss_pred             EECCCCCeEEeC
Confidence            667777766653

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=85.86  E-value=0.079  Score=27.59  Aligned_cols=14  Identities=29%  Similarity=0.797  Sum_probs=9.7

Q ss_pred             cccccCCCCCcCCC
Q psy13444         70 FNYVCCLCDYNVNG   83 (129)
Q Consensus        70 ~~~~c~~c~~~~~~   83 (129)
                      |.|.|+.||..|-.
T Consensus        50 F~FkCP~CgEEFyG   63 (95)
T 2k5c_A           50 FVFKCPVCGEEFYG   63 (95)
T ss_dssp             SEEECTTTCCEEET
T ss_pred             HhhcCCCccHHHhc
Confidence            34888888876643

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=85.74  E-value=0.64  Score=22.22  Aligned_cols=21  Identities=19%  Similarity=0.504  Sum_probs=15.7

Q ss_pred             ccCCCCCccccCchhHHHHHH
Q psy13444        100 YKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      -.|..|+..|...-+++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            578888888887777777754

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.23  E-value=0.57  Score=24.23  Aligned_cols=25  Identities=24%  Similarity=0.578  Sum_probs=15.4

Q ss_pred             ccCCCCCcccc-------CchhHHHHHHhhhc
Q psy13444        100 YKCSHCGYETL-------RSHDLKRHMRIKHK  124 (129)
Q Consensus       100 ~~c~~C~k~f~-------~~~~l~~h~~~~~~  124 (129)
                      ..|..|++.+.       -.+.|.+|++..|.
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            45666666554       24577777776654

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=83.54  E-value=0.44  Score=28.65  Aligned_cols=24  Identities=38%  Similarity=0.966  Sum_probs=19.1

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      .|+|+.||..+.             ++.|-.|+.||.
T Consensus       138 ~~~C~~CG~i~~-------------~~~p~~CP~Cg~  161 (170)
T 3pwf_A          138 VYICPICGYTAV-------------DEAPEYCPVCGA  161 (170)
T ss_dssp             EEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             eeEeCCCCCeeC-------------CCCCCCCCCCCC
Confidence            599999999875             245679999984

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=82.94  E-value=1.5  Score=21.73  Aligned_cols=31  Identities=19%  Similarity=0.577  Sum_probs=20.6

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccC
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLR  111 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~  111 (129)
                      ..|.|..|+..+.-..           ..+.+|+.||....+
T Consensus        20 v~Y~C~~Cg~~~~l~~-----------~~~iRC~~CG~RILy   50 (63)
T 3h0g_L           20 MIYLCADCGARNTIQA-----------KEVIRCRECGHRVMY   50 (63)
T ss_dssp             CCCBCSSSCCBCCCCS-----------SSCCCCSSSCCCCCB
T ss_pred             eEEECCCCCCeeecCC-----------CCceECCCCCcEEEE
Confidence            3588888888776331           245788888866543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=82.68  E-value=0.94  Score=18.57  Aligned_cols=21  Identities=24%  Similarity=0.613  Sum_probs=15.6

Q ss_pred             ccccccccccCCcHHHHHHHHh
Q psy13444          4 VFCYHCNLTLPSSTEALILHSK   25 (129)
Q Consensus         4 ~~c~~c~~~f~~~~~~l~~h~~   25 (129)
                      |.|+.|....+. ...+..|-.
T Consensus         4 ~~CpvCk~q~Pd-~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPD-MDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESS-HHHHHHHHH
T ss_pred             ccCccccccCcC-hHHHHHHHH
Confidence            677888877777 777777754

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=82.56  E-value=1.5  Score=22.41  Aligned_cols=29  Identities=24%  Similarity=0.570  Sum_probs=17.2

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCcccc
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETL  110 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~  110 (129)
                      |.|+.|++.-..+          .+.-.|+|..|++.|.
T Consensus        27 y~C~fCgk~~vkR----------~a~GIW~C~~C~~~~A   55 (72)
T 3jyw_9           27 YDCSFCGKKTVKR----------GAAGIWTCSCCKKTVA   55 (72)
T ss_dssp             BCCSSCCSSCBSB----------CSSSCBCCSSSCCCCC
T ss_pred             ccCCCCCCceeEe----------cCCCeEECCCCCCEEe
Confidence            6777777653222          1233577777777664

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=81.13  E-value=1.3  Score=22.51  Aligned_cols=28  Identities=21%  Similarity=0.732  Sum_probs=18.7

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCcc
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYE  108 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~  108 (129)
                      ..|.|..|+..|...           ...+..|+.||..
T Consensus        27 v~Y~C~~CG~~~e~~-----------~~d~irCp~CG~R   54 (70)
T 1twf_L           27 LKYICAECSSKLSLS-----------RTDAVRCKDCGHR   54 (70)
T ss_dssp             CCEECSSSCCEECCC-----------TTSTTCCSSSCCC
T ss_pred             EEEECCCCCCcceeC-----------CCCCccCCCCCce
Confidence            458888888887653           1134578888873

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=80.05  E-value=3.6  Score=19.65  Aligned_cols=46  Identities=17%  Similarity=0.346  Sum_probs=27.8

Q ss_pred             cCccccccccCchhhHHHHHhhcccccCCCCccccccCCCCCc-CCChhhHHHHhhh
Q psy13444         38 KCYHCKQVLSSSMDDLLFHSRKCAVVWRPGKSFNYVCCLCDYN-VNGRTDMKRHLQT   93 (129)
Q Consensus        38 ~c~~c~~~f~~~~~~l~~h~~~c~~~~~~~~~~~~~c~~c~~~-~~~~~~l~~h~~~   93 (129)
                      .|..|...-.+.. +|..|...|..         -.|++|-.. -...++|+.|-++
T Consensus         5 vC~~C~~ECET~k-El~~H~~sCp~---------gqCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            5 VCDVCHHECETAK-ELESHRQSCIN---------GQCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             BCTTTCCBCSSTT-THHHHHHHHTT---------TBCTTTCCBCCSSHHHHHHHHTT
T ss_pred             hhhHHHhhhhhHH-HHHHHhccCCC---------CCCCcccCcCCcCHHHHHHHHHH
Confidence            3666665556665 77777777654         357766543 2345667666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	129
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-09
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (109), Expect = 8e-09
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           H+GEKPY C  CG    RS  L +H R+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 8e-09
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 89  RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           R        + YKC  CG     S DL +H R 
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 2e-08
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           THTGEKPY CSHC     +   L  H +  H
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 2e-08
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 93  THTGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           TH+GEKPY+C  C     +S  +K H+  KH
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (101), Expect = 2e-07
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 90  HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
             +  TG KP++C  C     RS  L  H + 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (100), Expect = 2e-07
 Identities = 6/28 (21%), Positives = 14/28 (50%)

Query: 94  HTGEKPYKCSHCGYETLRSHDLKRHMRI 121
            +G++P+ C  C        +  RH+++
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKV 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 6e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 95  TGEKPYKCSHCGYETLRSHDLKRHMRIKH 123
           +  KPY C  CG    R   L  H++  H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 5e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 72  YVCCLCDYNVNGRTDMKRHLQ-THTGEKPYKC 102
           Y+C  C    +    +  H++  HT E+P+KC
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (86), Expect = 2e-05
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 97  EKPYKCSHCGYETLRSHDLKRHMRI 121
           +KP++C  C     RS  L  H+R 
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRT 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.7 bits (83), Expect = 6e-05
 Identities = 8/24 (33%), Positives = 10/24 (41%)

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           + + C  C     R   LKRH R 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS 24

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 8e-05
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 98  KPYKCSHCGYETLRSHDLKRHMRI 121
           K + C  C    +RS  L +H++ 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKT 24

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 3e-04
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 71  NYVC--CLCDYNVNGRTDMKRHLQTHTGEKPYKC 102
           ++ C    C  + N +  +K H++ H+  + Y C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 5e-04
 Identities = 5/40 (12%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 84  RTDMKRHLQTHTGEKPYKCSHC--GYETLRSHDLKRHMRI 121
           R  + +++     +K ++C          R ++++ H++ 
Sbjct: 4   RGSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQT 42

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 6e-04
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 75  CLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRI 121
           C C  +   ++   RH+  H G +PY C  CG +    H L  HM+I
Sbjct: 6   CQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.002
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 98  KPYKCSH--CGYETLRSHDLKRHMRI 121
           +P+ C+   CG    RS +L+RH R 
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRT 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.5 bits (72), Expect = 0.003
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 97  EKPYKCSH--CGYETLRSHDLKRHMRI 121
           ++PY C H  C    +R+HDL RH + 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKS 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	129
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.62
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.6
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.54
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.52
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.45
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.44
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.41
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.41
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.41
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.16
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.16
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.15
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.15
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.12
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.96
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.92
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.9
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.84
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.71
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.7
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.57
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.49
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.42
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.31
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.24
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.19
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.15
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.08
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.06
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.04
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.03
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.93
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.9
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.84
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.81
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.68
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.68
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.67
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.64
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.48
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.44
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.41
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.25
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.25
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.18
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.16
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.12
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.12
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.96
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.95
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.88
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.84
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.6
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.56
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.3
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.26
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.94
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.89
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.83
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.72
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.64
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.5
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.39
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.62
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.61
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.54
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.46
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.88
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.01
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.0
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.86
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.3
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.15
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.52
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.4
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	90.28
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.19
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.91
d1fu9a_	36	U-shaped transcription factor, different fingers {	87.71
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	85.07
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.23
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	83.42
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.25
d1wjpa1	42	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.88
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	82.78
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	82.3

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.6e-19  Score=88.49  Aligned_cols=52  Identities=33%  Similarity=0.694  Sum_probs=49.7

Q ss_pred             cccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCccccCchhHHHHHHhh
Q psy13444         70 FNYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        70 ~~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~  122 (129)
                      ++|.| .||+.|....+|..|+++|+|++||.|..||++|...+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            47999 59999999999999999999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.3e-18  Score=82.63  Aligned_cols=52  Identities=15%  Similarity=0.177  Sum_probs=49.2

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhcccCCCCCcccCccccccccCchhhHHHHHhh
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      ||||+| +||+.|.. ...|..|+++|.    +++||.|.+||+.|.... .|..|++.
T Consensus         1 EK~y~C-~Cgk~F~~-~~~l~~H~~~Ht----~ekpy~C~~C~k~F~~~~-~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-QCGKSFTH-KSQRDRHMSMHL----GLRPYGCGVCGKKFKMKH-HLVGHMKI   52 (53)
T ss_dssp             CCCEEC-TTSCEESS-HHHHHHHHHHHS----CCCSEECTTTSCEESSSH-HHHHHHTT
T ss_pred             CcCCCC-CCCCeECC-HHHhHHHhhccc----cccCCcCCCcCCEecCHH-HHHHHHhc
Confidence            799999 59999999 999999999999    999999999999999998 99999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.8e-17  Score=73.47  Aligned_cols=37  Identities=30%  Similarity=0.503  Sum_probs=35.5

Q ss_pred             HHhhhccCCCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         89 RHLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        89 ~h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +|+++|++++||.|.+|||+|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5899999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.2e-16  Score=68.58  Aligned_cols=33  Identities=42%  Similarity=0.739  Sum_probs=31.7

Q ss_pred             hccCCCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         93 THTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        93 ~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +|+|+|||+|.+||++|.+.++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.6e-15  Score=67.44  Aligned_cols=35  Identities=43%  Similarity=0.712  Sum_probs=32.8

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ++|+||+||+|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999998864

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=2.3e-15  Score=67.36  Aligned_cols=35  Identities=29%  Similarity=0.490  Sum_probs=33.1

Q ss_pred             HhhhccCCCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         90 HLQTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        90 h~~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |.++|+|||||+|..|+++|.+.++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            68899999999999999999999999999999864

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.1e-14  Score=63.66  Aligned_cols=35  Identities=40%  Similarity=0.658  Sum_probs=31.8

Q ss_pred             hhccCCCcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         92 QTHTGEKPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        92 ~~h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      ++|+||+||+|..|++.|+..++|..|++.++++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            57999999999999999999999999998777654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.9e-14  Score=62.56  Aligned_cols=32  Identities=19%  Similarity=0.547  Sum_probs=30.0

Q ss_pred             ccCCCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         94 HTGEKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        94 h~~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |+||+||+|.+|++.|.+.+.|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.8e-14  Score=64.16  Aligned_cols=32  Identities=28%  Similarity=0.592  Sum_probs=15.5

Q ss_pred             CCcccCCCCCccccCchhHHHHHH-hhhcccCC
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMR-IKHKIVGK  128 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~-~~~~~~~~  128 (129)
                      +|||+|..||++|...+.|.+|++ +|+|++||
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy   35 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH   35 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCc
Confidence            344555555555555555555543 34555544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.41  E-value=4.7e-14  Score=58.73  Aligned_cols=28  Identities=32%  Similarity=0.648  Sum_probs=26.2

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      ||||+|..|+++|.+.+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999987

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.6e-14  Score=58.65  Aligned_cols=29  Identities=24%  Similarity=0.602  Sum_probs=25.2

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      |||.|.+||++|.+.+.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58888899999999999999999888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.41  E-value=6e-14  Score=59.08  Aligned_cols=29  Identities=28%  Similarity=0.511  Sum_probs=24.3

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||+|..||++|.+.+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=4.9e-14  Score=66.14  Aligned_cols=42  Identities=14%  Similarity=0.381  Sum_probs=37.1

Q ss_pred             hhhHHHHhhhccCCCcccCCC--CCccccCchhHHHHHHhhhccc
Q psy13444         84 RTDMKRHLQTHTGEKPYKCSH--CGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        84 ~~~l~~h~~~h~~~k~~~c~~--C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +..+..|+. |.|++||.|..  |++.|...+.|..|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345666775 99999999977  9999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5e-13  Score=59.99  Aligned_cols=36  Identities=22%  Similarity=0.379  Sum_probs=32.6

Q ss_pred             CCcccccccccccCCcHHHHHHHHh-hhcccCCCCCcccCcc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSK-ICSAVNRPDNKLKCYH   41 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~-~~~~~~~~~~~~~c~~   41 (129)
                      +|||+|.+|++.|.. ..+|..|++ +|+    +++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~-~~~L~~H~r~~Ht----~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSR-PDHLNGHIKQVHT----SERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESS-HHHHHHHHHHTSC----CCCCCCSSS
T ss_pred             CCCccCCCCCCCcCC-hHHhhccCcCccC----CCcCcCCcC
Confidence            689999999999999 999999975 799    999999963

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.5e-13  Score=54.70  Aligned_cols=26  Identities=42%  Similarity=0.792  Sum_probs=23.6

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhh
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      |||+|.+|||+|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999885

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.16  E-value=1.1e-11  Score=52.00  Aligned_cols=28  Identities=36%  Similarity=0.775  Sum_probs=26.4

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      ||.|++|++.|...+.|.+|+++|+|||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            6899999999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1e-11  Score=52.32  Aligned_cols=28  Identities=36%  Similarity=0.592  Sum_probs=23.0

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhhcc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |||.|..  ||++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=9.8e-12  Score=51.54  Aligned_cols=27  Identities=19%  Similarity=0.351  Sum_probs=25.3

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||+|.+|++.|.. .+.|..|+++|+
T Consensus         1 EKPy~C~~C~k~F~~-~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSR-SDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESC-HHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecc-cccccccCCCcc
Confidence            799999999999999 899999999987

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.6e-11  Score=51.34  Aligned_cols=28  Identities=21%  Similarity=0.559  Sum_probs=26.2

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      +|.|++|++.|..++.|..|+++|+||+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            6899999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.7e-12  Score=54.90  Aligned_cols=32  Identities=25%  Similarity=0.670  Sum_probs=22.6

Q ss_pred             cccCC--CCCcCCChhhHHHHhhhccCCCcccCC
Q psy13444         72 YVCCL--CDYNVNGRTDMKRHLQTHTGEKPYKCS  103 (129)
Q Consensus        72 ~~c~~--c~~~~~~~~~l~~h~~~h~~~k~~~c~  103 (129)
                      |.|+.  |++.|..+..|.+|+++|+|++||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  777777777777777777777777775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.6e-11  Score=51.81  Aligned_cols=28  Identities=32%  Similarity=0.726  Sum_probs=23.8

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhhcc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |||.|..  ||++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888866  888998888899998888885

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.9e-11  Score=51.95  Aligned_cols=29  Identities=34%  Similarity=0.706  Sum_probs=21.6

Q ss_pred             CcccCC--CCCccccCchhHHHHHHhhhccc
Q psy13444         98 KPYKCS--HCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus        98 k~~~c~--~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +||.|+  .||++|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            577774  47888888888888888777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.2e-11  Score=53.03  Aligned_cols=30  Identities=23%  Similarity=0.493  Sum_probs=27.7

Q ss_pred             ccCCC--CCccccCchhHHHHHHhhhcccCCC
Q psy13444        100 YKCSH--CGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus       100 ~~c~~--C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      |.|+.  ||++|...+.|.+|+++|+|++||+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            66765  9999999999999999999999995

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=48.76  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=23.0

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||+|.+||+.|.. .+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~-~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQ-NSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESS-HHHHHHHHHHHH
T ss_pred             CCccCCCCcCeecc-CcccccCccCCC
Confidence            78999999999999 899999998874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.9e-11  Score=54.07  Aligned_cols=32  Identities=31%  Similarity=0.590  Sum_probs=21.3

Q ss_pred             CCCccccccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         66 PGKSFNYVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        66 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      +...+||.|++||++|...++|..|+++|+||
T Consensus         7 Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            34555677777777777777777777777664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1e-10  Score=50.33  Aligned_cols=27  Identities=19%  Similarity=0.448  Sum_probs=14.7

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||+|.+|++.|.. .++|..|+++|+
T Consensus         5 ekpy~C~~Cgk~F~~-~~~L~~H~r~Ht   31 (33)
T d1x6ea1           5 EKPYGCVECGKAFSR-SSILVQHQRVHT   31 (33)
T ss_dssp             CCCEECSSSCCEESS-HHHHHHHHHGGG
T ss_pred             CCCeeCCCCCCEeCc-hHHhHhhccccC
Confidence            355555555555555 555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.3e-10  Score=48.43  Aligned_cols=27  Identities=44%  Similarity=0.858  Sum_probs=23.2

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhhc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |||.|..  |+|+|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888866  99999999999999998876

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=3.2e-10  Score=48.32  Aligned_cols=29  Identities=38%  Similarity=0.888  Sum_probs=24.8

Q ss_pred             CCcccCCC--CCccccCchhHHHHHHhhhcc
Q psy13444         97 EKPYKCSH--CGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        97 ~k~~~c~~--C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |+||.|..  |+++|...+.|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68899977  999999999999999988763

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=5e-10  Score=48.75  Aligned_cols=27  Identities=15%  Similarity=0.305  Sum_probs=13.2

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||+|.+|++.|.. ..+|..|+++|.
T Consensus         5 ekPy~C~~C~k~F~~-~~~L~~H~r~Ht   31 (35)
T d1srka_           5 KRPFVCRICLSAFTT-KANCARHLKVHT   31 (35)
T ss_dssp             CSCEECSSSCCEESS-HHHHHHHHGGGT
T ss_pred             CccccCCCCCCcccC-hHHHHHHccccC
Confidence            344555555555555 455555544443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=2.3e-10  Score=50.72  Aligned_cols=31  Identities=19%  Similarity=0.436  Sum_probs=20.8

Q ss_pred             HhhhcccCCCCCcccCccccccccCchhhHHHHHhh
Q psy13444         24 SKICSAVNRPDNKLKCYHCKQVLSSSMDDLLFHSRK   59 (129)
Q Consensus        24 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~~l~~h~~~   59 (129)
                      .++|+    +++||+|.+|++.|.... .|..|++.
T Consensus         3 ~R~HT----geKPy~C~~C~k~F~~~~-~L~~H~r~   33 (37)
T d1p7aa_           3 TRGST----GIKPFQCPDCDRSFSRSD-HLALHRKR   33 (37)
T ss_dssp             SSTTC----CSSSBCCTTTCCCBSSHH-HHHHHHGG
T ss_pred             CCccC----CccCeEeCCCCCEecCHH-HHHHHHhc
Confidence            44555    677777777777777766 77777664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.2e-09  Score=47.98  Aligned_cols=27  Identities=19%  Similarity=0.455  Sum_probs=19.6

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKC   60 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c   60 (129)
                      +++||+|.+|++.|.... .|..|++.+
T Consensus         5 gekPy~C~~C~k~F~~~~-~L~~H~r~H   31 (36)
T d1x6ha2           5 GEKPYACSHCDKTFRQKQ-LLDMHFKRY   31 (36)
T ss_dssp             CCCCEECSSSSCEESSHH-HHHHHHHHT
T ss_pred             CCCCEECCCCCCCcCCHh-HHHHhCccc
Confidence            777777777777777776 777777654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=45.00  Aligned_cols=26  Identities=31%  Similarity=0.691  Sum_probs=21.7

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhh
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~  123 (129)
                      +||.|..  |||+|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788877  8888888888888888874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.3e-09  Score=45.33  Aligned_cols=28  Identities=36%  Similarity=0.803  Sum_probs=25.0

Q ss_pred             ccccC--CCCCcCCChhhHHHHhhhccCCC
Q psy13444         71 NYVCC--LCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        71 ~~~c~--~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      ||.|+  .|++.|...++|..|+++|+|||
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            57885  59999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.9e-09  Score=44.18  Aligned_cols=26  Identities=23%  Similarity=0.331  Sum_probs=24.0

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||+|+.  |++.|.. .+.|..|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~-~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSR-LENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSS-HHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECC-hhHhhhhcCcCc
Confidence            7899988  9999999 899999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.6e-09  Score=44.34  Aligned_cols=26  Identities=23%  Similarity=0.353  Sum_probs=23.9

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||+|+.  |++.|.. .+.|..|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~-~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSL-DFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESC-HHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECc-HHHcCccccccC
Confidence            7899977  9999999 899999999998

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.8e-09  Score=44.54  Aligned_cols=31  Identities=23%  Similarity=0.186  Sum_probs=25.0

Q ss_pred             cccCCCCCccccCchhHHHHHHhhhcccCCC
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMRIKHKIVGKS  129 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~~~~~~~~~~  129 (129)
                      ...|..|||+|.....|.+|...|+|++||+
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3567888888888888888888888888885

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=4.6e-09  Score=41.76  Aligned_cols=27  Identities=44%  Similarity=0.858  Sum_probs=24.7

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhh
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      |+||.|..||+.|+......+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.9e-09  Score=41.00  Aligned_cols=26  Identities=42%  Similarity=0.677  Sum_probs=17.8

Q ss_pred             cccCCCCCccccCchhHHHHHHhhhc
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |.+|..|+|.|+++..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777776654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=2.9e-09  Score=46.71  Aligned_cols=25  Identities=20%  Similarity=0.483  Sum_probs=17.3

Q ss_pred             CCCcccCccccccccCchhhHHHHHh
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSR   58 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~   58 (129)
                      +++||.|++|++.|.... .|..|+.
T Consensus         5 gekP~~C~~C~k~F~~~~-~L~~H~~   29 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSG-TMKMHIL   29 (36)
T ss_dssp             CCCSEECTTTCCEESCHH-HHHHHHH
T ss_pred             CCCCEeCCCCcccccchH-HHHHHcc
Confidence            677777777777777766 7777754

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=1.4e-08  Score=43.04  Aligned_cols=27  Identities=26%  Similarity=0.431  Sum_probs=23.7

Q ss_pred             CCcccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||.|..  |++.|.. .+.|.+|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r-~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVR-NHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSS-SHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCC-HHHHHHHhhhcc
Confidence            68999987  9999999 899999998887

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=1e-08  Score=47.58  Aligned_cols=31  Identities=23%  Similarity=0.596  Sum_probs=23.2

Q ss_pred             CccccccCC--CCCcCCChhhHHHHhhhccCCC
Q psy13444         68 KSFNYVCCL--CDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        68 ~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      +..+|.|..  |++.|...++|..|+++|+||+
T Consensus        15 gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          15 PDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            445777765  8888888888888888887775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=2.5e-08  Score=41.31  Aligned_cols=26  Identities=19%  Similarity=0.411  Sum_probs=22.8

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||+|+.  |++.|.. .+.|..|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~-~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSR-SADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESS-HHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECc-hhHhhhhcCccC
Confidence            6899977  9999999 899999998886

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.7e-08  Score=39.19  Aligned_cols=29  Identities=34%  Similarity=0.702  Sum_probs=21.3

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      ++||+|..|.++....+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46777777777777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.4e-08  Score=40.91  Aligned_cols=25  Identities=20%  Similarity=0.351  Sum_probs=16.7

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhh
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~   27 (129)
                      |||+|+.  |++.|.. .++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~-~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQ-STNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSS-TTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCC-HHHHHHHHhhc
Confidence            5666665  7777766 66677776665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=5e-08  Score=38.22  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=14.5

Q ss_pred             cCCCCCccccCchhHHHHHHhhhcc
Q psy13444        101 KCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus       101 ~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      .|.+|||+|...+.|.+|+.+|+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            4555666666666666666555553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=2e-07  Score=36.90  Aligned_cols=27  Identities=22%  Similarity=0.319  Sum_probs=20.6

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||.|..||+.|.. .....+|..+|.
T Consensus         1 EkPf~C~~CgrkFAr-sderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFAR-SDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESS-HHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhc-chhhhhhhhhcc
Confidence            678888888888888 677777777663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3e-07  Score=35.24  Aligned_cols=25  Identities=28%  Similarity=0.640  Sum_probs=21.4

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      ..|..|++.|.++..|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4688899999999999999998875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.1e-07  Score=37.41  Aligned_cols=29  Identities=34%  Similarity=0.701  Sum_probs=21.7

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |+||+|+.|+..|..+.-+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            56777888887787777777777777663

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.9e-07  Score=36.99  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=20.9

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhhc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |||.|..  |+|++...++|+.|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777766  78888888888888887665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.9e-07  Score=35.62  Aligned_cols=26  Identities=38%  Similarity=0.650  Sum_probs=23.3

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      .+|.+||++|..++.|.+|+-+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            47899999999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.4e-07  Score=36.17  Aligned_cols=27  Identities=19%  Similarity=0.349  Sum_probs=23.5

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      ||||.|+.|+..|.. ...+..|.+.|-
T Consensus         1 ekp~~cpic~qrfkr-kdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKR-KDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSC-HHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhc-cccceEeeeccc
Confidence            688999999999998 888888888876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.1e-07  Score=37.38  Aligned_cols=30  Identities=33%  Similarity=0.695  Sum_probs=26.9

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCCCccc
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGEKPYK  101 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~  101 (129)
                      ..|..||+.|.+...|.+|.-.|.+|+||.
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            568999999999999999999999999973

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3e-07  Score=37.25  Aligned_cols=27  Identities=33%  Similarity=0.700  Sum_probs=22.9

Q ss_pred             CcccCCC--CCccccCchhHHHHH-Hhhhc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHM-RIKHK  124 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~-~~~~~  124 (129)
                      +||.|..  |.|+|+..++...|+ ++|+.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5888877  999999999999997 77764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=6e-07  Score=34.96  Aligned_cols=26  Identities=46%  Similarity=1.018  Sum_probs=22.3

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhh
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      +||+|..|+++-...++|..|+++|+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=9.3e-07  Score=34.69  Aligned_cols=27  Identities=15%  Similarity=0.313  Sum_probs=24.5

Q ss_pred             CCcccccccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |+||+|..|...... .+.|..|++.|.
T Consensus         1 erpfkcqlcsy~srn-ssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRN-SSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESS-HHHHHHHHTTCC
T ss_pred             CCcceeeecccccCC-chheEEeeeccc
Confidence            689999999988888 899999999887

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.1e-06  Score=38.14  Aligned_cols=26  Identities=35%  Similarity=0.783  Sum_probs=23.5

Q ss_pred             cCCCcccCCCCCccccCchhHHHHHH
Q psy13444         95 TGEKPYKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus        95 ~~~k~~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      +|.|||+|..|+|.|-..+++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999864

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.6e-06  Score=34.19  Aligned_cols=26  Identities=31%  Similarity=0.774  Sum_probs=12.7

Q ss_pred             ccCCCCCccccCchhHHHHHHhhhcc
Q psy13444        100 YKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |.|+.||......|.|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            34445555444555555555555443

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.6e-06  Score=33.55  Aligned_cols=27  Identities=30%  Similarity=0.693  Sum_probs=24.7

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      |+|+.|+..-..++-|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1e-06  Score=38.23  Aligned_cols=29  Identities=14%  Similarity=0.246  Sum_probs=24.8

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhccc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKCAV   62 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c~~   62 (129)
                      +.+||.|..|+|.|.+.. ++.+|...|..
T Consensus         2 GiKPYeC~~C~KrFMWRD-SF~RH~~~C~k   30 (44)
T d2csha2           2 GIKPYECNICAKRFMWRD-SFHRHVTSCTK   30 (44)
T ss_dssp             CCCCEECSSSCCEESCHH-HHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHH-HHHHhhhhhhh
Confidence            678999999999999986 99999887654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=4.1e-06  Score=32.17  Aligned_cols=26  Identities=27%  Similarity=0.323  Sum_probs=15.9

Q ss_pred             cCCCCCccccCchhHHHHHHhhhccc
Q psy13444        101 KCSHCGYETLRSHDLKRHMRIKHKIV  126 (129)
Q Consensus       101 ~c~~C~k~f~~~~~l~~h~~~~~~~~  126 (129)
                      +|+.|.|.|..+..|..|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            45666666666666666666666653

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=6.7e-06  Score=32.53  Aligned_cols=28  Identities=36%  Similarity=0.801  Sum_probs=23.7

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +||+|..|.......++|..|.++.|++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5889999998888899999999886653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.84  E-value=1e-05  Score=30.55  Aligned_cols=23  Identities=30%  Similarity=0.774  Sum_probs=14.0

Q ss_pred             cccCCCCCcCCChhhHHHHhhhc
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTH   94 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h   94 (129)
                      |.|..|...|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34566666666666666666655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.81  E-value=1.1e-05  Score=30.49  Aligned_cols=24  Identities=21%  Similarity=0.373  Sum_probs=21.0

Q ss_pred             ccccccccccCCcHHHHHHHHhhhc
Q psy13444          4 VFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         4 ~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |+|..|++.|.. .+.|.+|++.|.
T Consensus         1 ykcglcersfve-ksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVE-KSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSS-HHHHHHHGGGTC
T ss_pred             CcccchHHHHHH-HHHHHHHHHhhc
Confidence            689999999999 899999998874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.81  E-value=9e-06  Score=31.90  Aligned_cols=25  Identities=36%  Similarity=0.773  Sum_probs=19.4

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhh
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIK  122 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~  122 (129)
                      .||.|+.  |++.|+..+-|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  888888888888888776

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.68  E-value=1.2e-05  Score=34.51  Aligned_cols=26  Identities=19%  Similarity=0.643  Sum_probs=14.4

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      |+|..|++.|.+.++|--|++.|..+
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             cCCCCCCCccCCcccccchHhhhcch
Confidence            55555555555555555555555443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.7e-05  Score=30.74  Aligned_cols=26  Identities=27%  Similarity=0.443  Sum_probs=22.7

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||+|..|+..... .++|..|+++|.
T Consensus         2 kp~kck~cdyaaad-sssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAAD-SSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESS-HHHHHHHHHHSC
T ss_pred             CCcccccccchhcc-hhhHhhhhhccc
Confidence            78999999988888 889999998875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.67  E-value=2.3e-05  Score=33.60  Aligned_cols=26  Identities=23%  Similarity=0.379  Sum_probs=19.8

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +.|+|..|++.|.+ ..+|-.||+.|.
T Consensus         4 r~~~C~~C~k~F~s-~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRS-AQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESS-HHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCC-cccccchHhhhc
Confidence            56778888888877 777777877776

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=2.6e-05  Score=29.86  Aligned_cols=26  Identities=35%  Similarity=0.537  Sum_probs=22.8

Q ss_pred             ccCCCCCcCCChhhHHHHhhhccCCC
Q psy13444         73 VCCLCDYNVNGRTDMKRHLQTHTGEK   98 (129)
Q Consensus        73 ~c~~c~~~~~~~~~l~~h~~~h~~~k   98 (129)
                      +|+.|.+.|.++.-|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58889999999999999999998875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.63  E-value=2.6e-05  Score=30.68  Aligned_cols=28  Identities=29%  Similarity=0.510  Sum_probs=22.2

Q ss_pred             CcccCCC--CCccccCchhHHHHHHhhhcc
Q psy13444         98 KPYKCSH--CGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        98 k~~~c~~--C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +||.|..  |.|.|...-.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677755  888888888888888888875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=4.8e-05  Score=29.94  Aligned_cols=28  Identities=32%  Similarity=0.813  Sum_probs=19.0

Q ss_pred             CcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         98 KPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        98 k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +||+|..|.....+.++|..|++.-||+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4677777776667777777777665553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4.7e-05  Score=30.38  Aligned_cols=26  Identities=31%  Similarity=0.738  Sum_probs=19.8

Q ss_pred             ccccCC--CCCcCCChhhHHHHhhhccC
Q psy13444         71 NYVCCL--CDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        71 ~~~c~~--c~~~~~~~~~l~~h~~~h~~   96 (129)
                      ||.|..  |++.+..++.|+.|++.+.|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            466765  88888888888888886543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=4.4e-05  Score=29.94  Aligned_cols=26  Identities=31%  Similarity=0.842  Sum_probs=21.5

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccCC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      |.|..|...|.++-.|+.|+-.|+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            67888888888888888888888775

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.41  E-value=7.3e-05  Score=29.24  Aligned_cols=25  Identities=24%  Similarity=0.386  Sum_probs=17.4

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhh
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~   27 (129)
                      -||+|++  |++.|.. .+.|.+|..+|
T Consensus         2 ~py~c~hegcdk~fs~-ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSL-PSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESS-HHHHHHHHHHH
T ss_pred             CCccCCccCccccccC-HHHHhhhhhcc
Confidence            4677765  7777777 77777776654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.25  E-value=7.4e-05  Score=29.36  Aligned_cols=26  Identities=27%  Similarity=0.351  Sum_probs=20.5

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |||.|..  |++.|.. ...|.+|..+|.
T Consensus         1 ~pfpc~~egc~kgf~t-lhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTS-LHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESS-TTHHHHHHHHHH
T ss_pred             CCcCcccccccccchh-hhhhhhhhcccc
Confidence            5777754  8888888 888888887776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.25  E-value=6.9e-05  Score=30.15  Aligned_cols=26  Identities=35%  Similarity=0.629  Sum_probs=19.9

Q ss_pred             cccCCCCCccccCchhHHHHHH-hhhc
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMR-IKHK  124 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~-~~~~  124 (129)
                      ||.|..|++.|+..+-|.+|++ +|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6788888888888888888876 3443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00017  Score=30.63  Aligned_cols=28  Identities=25%  Similarity=0.565  Sum_probs=22.0

Q ss_pred             CCCcccC--CCCCccccCchhHHHHHHhhh
Q psy13444         96 GEKPYKC--SHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        96 ~~k~~~c--~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      .+|||.|  +.|+..|.....|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788888  558888888888888877663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00023  Score=27.40  Aligned_cols=22  Identities=23%  Similarity=0.350  Sum_probs=17.3

Q ss_pred             cccccccccccCCcHHHHHHHHh
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSK   25 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~   25 (129)
                      ||+|..||+.+.. ..+|..|..
T Consensus         1 pf~c~kcgkcyfr-kenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFR-KENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSS-HHHHHHHHH
T ss_pred             CCccccchhhhhh-HhHHHHHHH
Confidence            6788888888888 788887754

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00033  Score=27.55  Aligned_cols=23  Identities=26%  Similarity=0.817  Sum_probs=15.7

Q ss_pred             ccccCCCCCcCCChhhHHHHhhh
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQT   93 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~   93 (129)
                      ||.|..|.+.....++|..|.++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            46677777766667777776665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.0002  Score=30.41  Aligned_cols=27  Identities=19%  Similarity=0.396  Sum_probs=22.6

Q ss_pred             CCcccc--cccccccCCcHHHHHHHHhhhc
Q psy13444          1 MKDVFC--YHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         1 ~k~~~c--~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +|||.|  +-|+..|.+ ...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~n-eDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTN-EDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESS-HHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccc-hHHHHHhhhhhe
Confidence            689999  559999999 899999987765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00014  Score=28.52  Aligned_cols=23  Identities=30%  Similarity=0.846  Sum_probs=16.7

Q ss_pred             cccCCCCCccccCchhHHHHHHh
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMRI  121 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~~  121 (129)
                      ||.|..|..+|..+.+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00029  Score=27.27  Aligned_cols=25  Identities=40%  Similarity=0.728  Sum_probs=19.6

Q ss_pred             cccCCCCCccccCchhHHHHHHhhh
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~~~~  123 (129)
                      |-+|+.|.++.+.+..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888773

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00033  Score=27.41  Aligned_cols=24  Identities=17%  Similarity=0.794  Sum_probs=18.3

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTH   94 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h   94 (129)
                      ||.|..|.+.|..+.+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            367888888888888888887753

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=0.0003  Score=26.39  Aligned_cols=22  Identities=18%  Similarity=0.280  Sum_probs=16.9

Q ss_pred             cccccccccccCCcHHHHHHHHh
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSK   25 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~   25 (129)
                      ||+|..|...|.. ...|..|+-
T Consensus         2 pykcsscsqqfmq-kkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQ-KKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESS-HHHHHHHHH
T ss_pred             CCcccHHHHHHHH-HHHHHHHHH
Confidence            6788888888888 777777763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.88  E-value=0.00045  Score=26.54  Aligned_cols=21  Identities=14%  Similarity=0.333  Sum_probs=12.9

Q ss_pred             cccCCCCCcCCChhhHHHHhh
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQ   92 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~   92 (129)
                      |+|..||+.+.++.+|..|..
T Consensus         2 f~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHH
Confidence            556666666666666665543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00034  Score=26.22  Aligned_cols=22  Identities=45%  Similarity=0.979  Sum_probs=18.6

Q ss_pred             cccCCCCCccccCchhHHHHHH
Q psy13444         99 PYKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus        99 ~~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      ||+|..|...|-++.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7888889888988888888864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.84  E-value=0.00037  Score=27.96  Aligned_cols=22  Identities=27%  Similarity=0.475  Sum_probs=16.9

Q ss_pred             cccccccccccCCcHHHHHHHHh
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSK   25 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~   25 (129)
                      ||.|..|++.|.. ..-|.+|+.
T Consensus         1 Pf~C~~C~R~FaR-rDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTR-RDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESS-HHHHHHHHT
T ss_pred             CcccccccchhhH-HHHHHHHHH
Confidence            6788888888888 777777763

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00026  Score=28.43  Aligned_cols=26  Identities=27%  Similarity=0.623  Sum_probs=16.1

Q ss_pred             ccccCC--CCCcCCChhhHHHHh-hhccC
Q psy13444         71 NYVCCL--CDYNVNGRTDMKRHL-QTHTG   96 (129)
Q Consensus        71 ~~~c~~--c~~~~~~~~~l~~h~-~~h~~   96 (129)
                      ||.|..  |.++|...++-..|+ ++|..
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CccccCCChhhhhcchhhhhhhccccccC
Confidence            455554  667777776666665 55543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00075  Score=27.67  Aligned_cols=26  Identities=31%  Similarity=0.682  Sum_probs=19.4

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccC
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      .|+|..|++.|.++..+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            37788888888888888877766544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00073  Score=26.01  Aligned_cols=22  Identities=36%  Similarity=0.776  Sum_probs=18.5

Q ss_pred             ccCCCCCccccCchhHHHHHHh
Q psy13444        100 YKCSHCGYETLRSHDLKRHMRI  121 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~~  121 (129)
                      |+|+.|+-...++++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6788888888888888888874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.0014  Score=25.48  Aligned_cols=29  Identities=28%  Similarity=0.425  Sum_probs=26.1

Q ss_pred             CCcccCCCCCccccCchhHHHHHHhhhcc
Q psy13444         97 EKPYKCSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus        97 ~k~~~c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      +..|.|..|...|...-.|+-|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999999885

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0021  Score=25.14  Aligned_cols=26  Identities=19%  Similarity=0.312  Sum_probs=19.6

Q ss_pred             CcccccccccccCCcHHHHHHHHhhhc
Q psy13444          2 KDVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         2 k~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      +||+|..|.-.-.. .++|..|+..-+
T Consensus         1 rPFkC~~CsFDtkq-~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQ-PSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESS-HHHHHHHHHHHH
T ss_pred             CCcccceecccccC-cchHHHHHHHHc
Confidence            58888888877778 788888875433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0015  Score=27.05  Aligned_cols=24  Identities=25%  Similarity=0.357  Sum_probs=18.1

Q ss_pred             cCCCCCcCCChhhHHHHhhhccCC
Q psy13444         74 CCLCDYNVNGRTDMKRHLQTHTGE   97 (129)
Q Consensus        74 c~~c~~~~~~~~~l~~h~~~h~~~   97 (129)
                      |+--++.|.....|..|++.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456788888888888888875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.94  E-value=0.0031  Score=23.62  Aligned_cols=22  Identities=32%  Similarity=0.717  Sum_probs=14.1

Q ss_pred             ccCCCCCccccCchhHHHHHHh
Q psy13444        100 YKCSHCGYETLRSHDLKRHMRI  121 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~~  121 (129)
                      |.|+.|-+-|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666666654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0024  Score=26.37  Aligned_cols=24  Identities=25%  Similarity=0.059  Sum_probs=19.9

Q ss_pred             CCCCCccccCchhHHHHHHhhhcc
Q psy13444        102 CSHCGYETLRSHDLKRHMRIKHKI  125 (129)
Q Consensus       102 c~~C~k~f~~~~~l~~h~~~~~~~  125 (129)
                      |.--++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444467889999999999999986

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.004  Score=27.67  Aligned_cols=25  Identities=16%  Similarity=0.216  Sum_probs=21.2

Q ss_pred             cccccccccccCCcHHHHHHHHhhhc
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      .|.|..|++.|+. ...|..|...|-
T Consensus         6 l~pCG~CgK~Ftd-~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTD-ANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSC-HHHHHHHHHHHT
T ss_pred             eeeccccccccCC-HHHHhHhHHhcC
Confidence            3789999999999 899999988775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0068  Score=23.27  Aligned_cols=25  Identities=28%  Similarity=0.503  Sum_probs=19.6

Q ss_pred             cccccccccccCCcHHHHHHHHhhhc
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      |-+|++|.....+ ...|..|.++|.
T Consensus         2 pekc~ecsyscss-kaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSS-KAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESS-HHHHHHHHGGGC
T ss_pred             CccCcccccccCc-HHHHHHhhcccc
Confidence            4578888888888 788888888775

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0027  Score=25.94  Aligned_cols=26  Identities=19%  Similarity=0.507  Sum_probs=20.6

Q ss_pred             cccCccccccccCchhhHHHHHhhccc
Q psy13444         36 KLKCYHCKQVLSSSMDDLLFHSRKCAV   62 (129)
Q Consensus        36 ~~~c~~c~~~f~~~~~~l~~h~~~c~~   62 (129)
                      .|.|..|+|.|.... -|.+|...|..
T Consensus         4 afvcskcgktftrrn-tm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRN-TMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHH-HHHHHHHHCCC
T ss_pred             eeeecccccchhcch-HHHHHhhhcCC
Confidence            477888888888887 88888887654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0051  Score=27.31  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=21.2

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhcc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHT   95 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~   95 (129)
                      .+.|..|++.|.....|+.|..-|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3789999999999999999887764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.39  E-value=0.0061  Score=24.63  Aligned_cols=23  Identities=22%  Similarity=0.546  Sum_probs=19.8

Q ss_pred             ccccccccccCCcHHHHHHHHhhh
Q psy13444          4 VFCYHCNLTLPSSTEALILHSKIC   27 (129)
Q Consensus         4 ~~c~~c~~~f~~~~~~l~~h~~~~   27 (129)
                      |.|.-||-.|.. .+.|..|+.-.
T Consensus         9 f~c~pcgirfss-~stleahqtyy   31 (36)
T d1y0jb1           9 FMCLPCGIAFSS-PSTLEAHQAYY   31 (36)
T ss_dssp             CBCTTTCCBCSC-HHHHHHHTTTT
T ss_pred             eeccccceeecC-hhHHHhhhhee
Confidence            789999999999 99999997653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.62  E-value=0.017  Score=25.48  Aligned_cols=32  Identities=28%  Similarity=0.548  Sum_probs=22.3

Q ss_pred             CCCcccCCCCCccccCchhHHHHHHhhhcccC
Q psy13444         96 GEKPYKCSHCGYETLRSHDLKRHMRIKHKIVG  127 (129)
Q Consensus        96 ~~k~~~c~~C~k~f~~~~~l~~h~~~~~~~~~  127 (129)
                      .+.|..|+.|+....+..+|++|+..-|=.+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            35667788888777777788877776554444

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.61  E-value=0.016  Score=21.97  Aligned_cols=20  Identities=25%  Similarity=0.385  Sum_probs=13.1

Q ss_pred             CCCccccCchhHHHHHHhhh
Q psy13444        104 HCGYETLRSHDLKRHMRIKH  123 (129)
Q Consensus       104 ~C~k~f~~~~~l~~h~~~~~  123 (129)
                      .|+|+|.....|..|+-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            36777777667776666654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0065  Score=29.04  Aligned_cols=15  Identities=20%  Similarity=0.558  Sum_probs=7.9

Q ss_pred             CcccCccccccccCc
Q psy13444         35 NKLKCYHCKQVLSSS   49 (129)
Q Consensus        35 ~~~~c~~c~~~f~~~   49 (129)
                      ..|.|+.|++.|...
T Consensus        13 ~~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDL   27 (62)
T ss_dssp             SEEECSSSCCEEEHH
T ss_pred             CceECCCCCCCcchh
Confidence            345555555555443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.026  Score=21.86  Aligned_cols=25  Identities=28%  Similarity=0.675  Sum_probs=15.2

Q ss_pred             ccCCCCCccccCchhHHHHHHhhhc
Q psy13444        100 YKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |.|..|||.......+.-|...-+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            4566666666666666666655443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.88  E-value=0.044  Score=20.99  Aligned_cols=19  Identities=11%  Similarity=0.321  Sum_probs=12.9

Q ss_pred             CCCccccCchhHHHHHHhh
Q psy13444        104 HCGYETLRSHDLKRHMRIK  122 (129)
Q Consensus       104 ~C~k~f~~~~~l~~h~~~~  122 (129)
                      .|+|.|...+.++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3667777777777776655

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.055  Score=25.62  Aligned_cols=25  Identities=36%  Similarity=0.554  Sum_probs=21.4

Q ss_pred             cccccccccccCCcHHHHHHHHhhhc
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      -|.|.+|+..|-. ...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s-~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQS-TAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESS-HHHHHHHHHHHH
T ss_pred             eeeechhHHHHhh-HHHHHHHHHhcc
Confidence            4889999999999 899999988775

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.00  E-value=0.068  Score=25.28  Aligned_cols=25  Identities=28%  Similarity=0.703  Sum_probs=13.3

Q ss_pred             cccCCCCCcCCChhhHHHHhhhccC
Q psy13444         72 YVCCLCDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        72 ~~c~~c~~~~~~~~~l~~h~~~h~~   96 (129)
                      |.|..|...|..-..|..|...|..
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhccH
Confidence            5555555555555555555555543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.081  Score=20.32  Aligned_cols=20  Identities=20%  Similarity=0.340  Sum_probs=14.6

Q ss_pred             CCCCccccCchhHHHHHHhh
Q psy13444        103 SHCGYETLRSHDLKRHMRIK  122 (129)
Q Consensus       103 ~~C~k~f~~~~~l~~h~~~~  122 (129)
                      +.||+.|+....|..|.+..
T Consensus         6 ~gc~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHG
T ss_pred             CCchhhhccHHHHHhHHHHH
Confidence            55888888888787776643

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.30  E-value=0.052  Score=22.93  Aligned_cols=24  Identities=38%  Similarity=0.996  Sum_probs=17.2

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      -|.|..||..+             .|+.|..|+.||.
T Consensus         5 ~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           5 VYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             EEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             EEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            47888888764             3455678898874

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.15  E-value=0.064  Score=22.47  Aligned_cols=24  Identities=33%  Similarity=0.611  Sum_probs=17.3

Q ss_pred             ccccCCCCCcCCChhhHHHHhhhccCCCcccCCCCCc
Q psy13444         71 NYVCCLCDYNVNGRTDMKRHLQTHTGEKPYKCSHCGY  107 (129)
Q Consensus        71 ~~~c~~c~~~~~~~~~l~~h~~~h~~~k~~~c~~C~k  107 (129)
                      -|+|..||...             .|+.|-.|+.||.
T Consensus         5 ~~vC~vCGyi~-------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           5 FHLCPICGYIH-------------KGEDFEKCPICFR   28 (36)
T ss_dssp             EEECSSSCCEE-------------ESSCCSBCTTTCC
T ss_pred             EEECCCCCCEe-------------eCCCCCcCCCCCC
Confidence            47888888764             3455778999984

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.52  E-value=0.091  Score=21.33  Aligned_cols=29  Identities=31%  Similarity=0.612  Sum_probs=20.1

Q ss_pred             CCCcccCCCCCccccCchhHHHHHHhhhc
Q psy13444         96 GEKPYKCSHCGYETLRSHDLKRHMRIKHK  124 (129)
Q Consensus        96 ~~k~~~c~~C~k~f~~~~~l~~h~~~~~~  124 (129)
                      |+..|.|..|.+.+...+++-+|.-+.|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            44567778888777777777777665443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.40  E-value=0.13  Score=20.19  Aligned_cols=20  Identities=35%  Similarity=0.619  Sum_probs=10.5

Q ss_pred             CCCcCCChhhHHHHhhhccC
Q psy13444         77 CDYNVNGRTDMKRHLQTHTG   96 (129)
Q Consensus        77 c~~~~~~~~~l~~h~~~h~~   96 (129)
                      |+-.|.....|..|.-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            55555555555555555554

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.098  Score=21.47  Aligned_cols=22  Identities=23%  Similarity=0.413  Sum_probs=15.1

Q ss_pred             cccccccccccCCcHHHHHHHHh
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSK   25 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~   25 (129)
                      ...|-+|-+.|.. ..++++|+-
T Consensus         3 kltclecmrtfks-sfsiwrhqv   24 (41)
T d1wjpa3           3 KLTCLECMRTFKS-SFSIWRHQV   24 (41)
T ss_dssp             GGEEGGGTEECSS-HHHHHHHHH
T ss_pred             cccHHHHHHHHHH-HHHHHHhhh
Confidence            3457777777777 677777763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.19  E-value=0.063  Score=25.91  Aligned_cols=23  Identities=17%  Similarity=0.209  Sum_probs=19.0

Q ss_pred             cccccccccccCCcHHHHHHHHhh
Q psy13444          3 DVFCYHCNLTLPSSTEALILHSKI   26 (129)
Q Consensus         3 ~~~c~~c~~~f~~~~~~l~~h~~~   26 (129)
                      .|-|..|++.|.+ ...|..|++.
T Consensus        15 qfYCv~C~K~F~s-e~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFID-STNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSS-HHHHHHHTTC
T ss_pred             EEecccccCccCC-HHHHHHHHcc
Confidence            3779999999999 8889888754

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.91  E-value=0.041  Score=26.57  Aligned_cols=21  Identities=33%  Similarity=0.640  Sum_probs=12.1

Q ss_pred             ccCCCCCccccCchhHHHHHH
Q psy13444        100 YKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      |-|..|+|.|.....|..|++
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            445556666666555555544

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.71  E-value=0.33  Score=19.87  Aligned_cols=23  Identities=13%  Similarity=0.626  Sum_probs=19.1

Q ss_pred             cccccccccCCcHHHHHHHHhhhc
Q psy13444          5 FCYHCNLTLPSSTEALILHSKICS   28 (129)
Q Consensus         5 ~c~~c~~~f~~~~~~l~~h~~~~~   28 (129)
                      -|..|+-.|.. ...+..|.....
T Consensus        10 YC~~CDI~Fn~-~~T~~aHKk~YC   32 (36)
T d1fu9a_          10 YCSTCDISFNY-VKTYLAHKQFYC   32 (36)
T ss_dssp             EETTTTEECSS-HHHHHHHHHHTS
T ss_pred             HHhhCCceehh-HHHHHHHHHhcc
Confidence            38889999999 999999976554

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=85.07  E-value=0.34  Score=20.25  Aligned_cols=13  Identities=8%  Similarity=-0.276  Sum_probs=6.7

Q ss_pred             ccccCCCCCcCCC
Q psy13444         71 NYVCCLCDYNVNG   83 (129)
Q Consensus        71 ~~~c~~c~~~~~~   83 (129)
                      ...|..||..+..
T Consensus        22 ~g~CD~cg~~L~q   34 (37)
T d2ak3a2          22 MGIDDLTGEPLVQ   34 (37)
T ss_dssp             TTBCTTTCCBCBC
T ss_pred             cCCccCCCCcCEe
Confidence            3456666654443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.23  E-value=0.65  Score=17.73  Aligned_cols=24  Identities=21%  Similarity=0.458  Sum_probs=16.2

Q ss_pred             Ccccccc--cccccCCcHHHHHHHHhh
Q psy13444          2 KDVFCYH--CNLTLPSSTEALILHSKI   26 (129)
Q Consensus         2 k~~~c~~--c~~~f~~~~~~l~~h~~~   26 (129)
                      |.|+|+.  |+-.|+. ..++..|...
T Consensus         1 knf~cdsd~cdl~ftt-kanmkkhfnr   26 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTT-KANMKKHFNR   26 (31)
T ss_dssp             CCEECSSSSCCCEESS-HHHHHHHHHH
T ss_pred             CCccccCCCcceEEee-hHHHHHHHhh
Confidence            3566753  7777888 7777777643

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.42  E-value=0.17  Score=23.11  Aligned_cols=10  Identities=40%  Similarity=1.202  Sum_probs=4.3

Q ss_pred             cccCCCCCcC
Q psy13444         72 YVCCLCDYNV   81 (129)
Q Consensus        72 ~~c~~c~~~~   81 (129)
                      |+|..|+..+
T Consensus         4 y~C~~CgyiY   13 (53)
T d1iroa_           4 YTCTVCGYIY   13 (53)
T ss_dssp             EEETTTCCEE
T ss_pred             eEcCCCCcEE
Confidence            3444444443

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.25  E-value=0.53  Score=19.05  Aligned_cols=27  Identities=26%  Similarity=0.426  Sum_probs=17.1

Q ss_pred             CCCcccCccccccccCchhhHHHHHhhc
Q psy13444         33 PDNKLKCYHCKQVLSSSMDDLLFHSRKC   60 (129)
Q Consensus        33 ~~~~~~c~~c~~~f~~~~~~l~~h~~~c   60 (129)
                      ..+.|.|..|-+-..+.. .+.+|+..|
T Consensus         4 lpkLyiCEfCLKYmks~~-~l~RH~~KC   30 (33)
T d1m36a_           4 LPKLYLCEFCLKYMKSRT-ILQQHMKKC   30 (33)
T ss_dssp             CCCCEECSSSCCEESCHH-HHHHHHHHT
T ss_pred             CCeeeeehhhhhhhCCHH-HHHHHHHhC
Confidence            345566777766666665 677777654

>d1wjpa1 g.37.1.1 (A:1-42) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.88  E-value=0.34  Score=20.04  Aligned_cols=25  Identities=32%  Similarity=0.563  Sum_probs=19.9

Q ss_pred             CcccCccccccccCchhhHHHHHhhc
Q psy13444         35 NKLKCYHCKQVLSSSMDDLLFHSRKC   60 (129)
Q Consensus        35 ~~~~c~~c~~~f~~~~~~l~~h~~~c   60 (129)
                      ..|+|..|...+.+.. +-..|.+.|
T Consensus        15 e~y~crlcnakl~sll-eqgnherlc   39 (42)
T d1wjpa1          15 EVYQCRLCNAKLSSLL-EQGSHERLC   39 (42)
T ss_dssp             CCCBCTTTCCBCSSHH-HHHHHHHHH
T ss_pred             ceeeeeehhhhHHHHH-HcccHHhHh
Confidence            4589999999998876 777787765

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.78  E-value=0.59  Score=20.50  Aligned_cols=21  Identities=19%  Similarity=0.504  Sum_probs=15.3

Q ss_pred             ccCCCCCccccCchhHHHHHH
Q psy13444        100 YKCSHCGYETLRSHDLKRHMR  120 (129)
Q Consensus       100 ~~c~~C~k~f~~~~~l~~h~~  120 (129)
                      -+|..|+..++...+++.|+-
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiF   27 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIF   27 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccCcccceeeeeecchHhhhh
Confidence            678888877777777776653

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=82.30  E-value=0.3  Score=21.43  Aligned_cols=12  Identities=42%  Similarity=1.179  Sum_probs=7.2

Q ss_pred             cccCCCCCcCCC
Q psy13444         72 YVCCLCDYNVNG   83 (129)
Q Consensus        72 ~~c~~c~~~~~~   83 (129)
                      |+|..|+..+..
T Consensus         4 y~C~~CgyiYd~   15 (45)
T d6rxna_           4 YVCNVCGYEYDP   15 (45)
T ss_dssp             EEETTTCCEECG
T ss_pred             eEeCCCCeEECc
Confidence            566666666544