Psyllid ID: psy13793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
Protein Sequence
MKKHKENSLLFLYKEDSSDVTIVKQEVESTKLPSPAKSPAKSKAGSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMSDNETEEAN
Secondary Structure (PSIPRED)
ccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHccccccccEcccccccEcccccHHEHccccccccccccccccccEcccccHHEEEEccccccccccccccccEcccccHHEHEcccccccccccccccEccccHHHEEccccccccccccccccccccHHHHHHHcccccccccccccEccccHHHHHHHHccccccccccHccccEccccHHHEHHHHcccccccccccccccEccccHHHEEEcHccccEEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccccEcccccccEccccccc
Coil and Loop (DISEMBL)
mkkhkensllflykedssdvtIVKQEvestklpspakspakskagSIVVKSLEHLkdlkvtkkktvydrrkngpkpyqcaicprgyysdiglqnhLWSHRKilknsnvgiyYTFTEDLreredgekrkhwidengggenemetptpkkigirekvnwKKTKITASNLLsynnamfssgtryqcplcnkkintkSNLRRHLqahkpkgkhtCEICFRIFKTEInltrhlechdtvelscpdcnrvyptnstLRAHMIshsterphncphcektfkRNQDLKFHLnqhtgerpykcpfcprtfassgncfshrkrmhegetlpdisldemsdneteean
Flexible Loop (DISEMBL)
mkkhkensllflykedssdvtIVKQEvestklpspakspakskagsivvkslehlkdlkvtkkktvydrrkngpkpyqcaiCPRGYYSDIGLQNHLWSHRkilknsnvgIYYTFTEdlreredgekrkhwidengggenemetptpkkigirekvnwkKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLqahkpkgkhtceICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRmhegetlpdisldemsdneteean
Low Complexity Region (SEG)
MKKHKENSLLFLYKEDSSDVTIVKQEVESTKLpspakspakskaGSIVVKSLEHlkdlkvtkkktvydRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMSDNETEEAN
Disordered region (IsUnstruct)
*********LFLY**********************************VVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTED********************************GIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMI**********PHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCF*****************************
Disordered Region (DISOPRED)
*****************SDVTIVKQEVESTKLPSPAKSPAKSKAGSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEM**N******
Disordered Region (DISEMBL)
MKKHKENSLLFLYKEDSSDVTIVKQEV*****************GSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDE**********
Disordered Region (DISPRO)
*****ENSLLF****DSSDVTIVKQEVESTKLPSPAKSPAKSKAGSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMSD*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKHKENSLLFLYKEDSSDVTIVKQEVESTKLPSPAKSPAKSKAGSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMSDNETEEAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	337	2.2.26 [Sep-21-2011]
Q9NW07	568	Zinc finger protein 358 O	yes	N/A	0.697	0.413	0.281	2e-23
Q8CJ78	1038	Zinc finger protein 628 O	no	N/A	0.442	0.143	0.36	1e-21
Q5EBL2	1055	Zinc finger protein 628 O	no	N/A	0.465	0.148	0.352	2e-21
Q9N003	741	Zinc finger protein 425 (	N/A	N/A	0.439	0.199	0.355	3e-21
Q60821	794	Zinc finger and BTB domai	no	N/A	0.451	0.191	0.376	3e-21
C9JN71	531	Zinc finger protein 878 O	no	N/A	0.741	0.470	0.250	4e-21
Q96EG3	531	Zinc finger protein 837 O	no	N/A	0.697	0.442	0.300	4e-21
Q6IV72	752	Zinc finger protein 425 O	no	N/A	0.439	0.196	0.355	5e-21
Q13105	803	Zinc finger and BTB domai	no	N/A	0.451	0.189	0.376	6e-21
Q6ZMW2	699	Zinc finger protein 782 O	no	N/A	0.667	0.321	0.284	1e-20

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 111/263 (42%), Gaps = 28/263 (10%)

Query: 60  VTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSH--RKILKNSNVGIYYTFTED 117
           +     V     + P+P+ C  C R +    GL  H  +H   K  +  + G  ++    
Sbjct: 134 LATSPAVLPAPASPPRPFSCPDCGRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGAT 193

Query: 118 LREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSS 177
           L +                G +    P  +     +   W+ T      LL + ++  S 
Sbjct: 194 LAQHR--------------GIHTGARPY-QCAACGKAFGWRST------LLKHRSS-HSG 231

Query: 178 GTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE-- 235
              + CP+C K     S L +HL+ H     H C +C + F     L +HL  H T E  
Sbjct: 232 EKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTH-TGERP 290

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
             CP C + +  +S L  H  +H+ ERP+ CPHC K F ++ +L+ HL  HTGERPY CP
Sbjct: 291 YPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACP 350

Query: 296 FCPRTFASSGNCFSHRKRMHEGE 318
            C + F  S     H   +H GE
Sbjct: 351 HCSKAFGQSSALLQHL-HVHSGE 372

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q8CJ78|ZN628_MOUSE Zinc finger protein 628 OS=Mus musculus GN=Znf628 PE=2 SV=2

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 1/150 (0%)

Query: 164 ASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN 223
            S+ L Y+    +    YQCP C K     S L+ H   H      TC  C   FK   +
Sbjct: 73  GSSALLYHQRGHTGERPYQCPDCPKAFKRSSLLQIHRSVHTGLRAFTCGQCGLAFKWSSH 132

Query: 224 LTRHLECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH 282
              HL  H       CPDC + +  +S+LR H   H+ ERP+ C  C K+F ++ +L+ H
Sbjct: 133 YQYHLRQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGICGKSFTQSTNLRQH 192

Query: 283 LNQHTGERPYKCPFCPRTFASSGNCFSHRK 312
              HTGERP++CP CP+TF  S N   H +
Sbjct: 193 QRVHTGERPFRCPLCPKTFTHSSNLLLHHR 222

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Mus musculus (taxid: 10090)

>sp|Q5EBL2|ZN628_HUMAN Zinc finger protein 628 OS=Homo sapiens GN=ZNF628 PE=2 SV=2

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 2/159 (1%)

Query: 164 ASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN 223
            S+ L Y+    +    YQCP C K     S L+ H   H       C  C   FK   +
Sbjct: 71  GSSALLYHQRGHTGERPYQCPDCPKAFKRSSLLQIHRSVHTGLRAFICGQCGLAFKWSSH 130

Query: 224 LTRHLECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH 282
              HL  H       CPDC + +  +S+LR H   H+ ERP+ C  C K+F ++ +L+ H
Sbjct: 131 YQYHLRQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGVCGKSFTQSTNLRQH 190

Query: 283 LNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP 321
              HTGERP++CP CP+TF  S N   H +R H     P
Sbjct: 191 QRVHTGERPFRCPLCPKTFTHSSNLLLH-QRTHGAAPAP 228

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Homo sapiens (taxid: 9606)

>sp|Q9N003|ZN425_MACFA Zinc finger protein 425 (Fragment) OS=Macaca fascicularis GN=ZNF425 PE=2 SV=2

 Score =  103 bits (256), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 163 TASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEI 222
           T  + L+ +  + S    YQCP C K    K NL+ HL  H  +   +C +C + F  + 
Sbjct: 581 THQSQLTEHLRLHSGEKPYQCPECQKTFRLKGNLKSHLLQHSGQKPFSCVMCGKSFTQQY 640

Query: 223 NLTRHLECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
            LT H+  H   +   CP+C++ Y    +L+ H+ +HS ERP  CP C K F + + LK 
Sbjct: 641 RLTEHIRVHSGEKPFQCPECDKSYCIRGSLKVHLYTHSGERPFQCPECGKGFLQKRSLKA 700

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSH 310
           HL  H+GERP+ C  C R+F   G   +H
Sbjct: 701 HLCLHSGERPFSCDECGRSFTYVGALKTH 729

Acts as a transcriptional repressor.

Macaca fascicularis (taxid: 9541)

>sp|Q60821|ZBT17_MOUSE Zinc finger and BTB domain-containing protein 17 OS=Mus musculus GN=Zbtb17 PE=1 SV=2

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 78/154 (50%), Gaps = 2/154 (1%)

Query: 166 NLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLT 225
           +LL+ +    S   RY+C  C K   T  NL+RH   H  +  + C+ C R F    +  
Sbjct: 366 SLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKM 425

Query: 226 RHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN 284
           RHLE HDT  E  CP C++ +     L+AH+  H  + P  C  C K F  + +LK HL 
Sbjct: 426 RHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLR 485

Query: 285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            H+GE+PY C  C R FA  G    H  R+H GE
Sbjct: 486 IHSGEKPYVCTHCQRQFADPGALQRH-VRIHTGE 518

May function as a housekeeping DNA-binding protein that regulates the expression of specific genes. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Also has potent growth arrest activity, probably through inhibition of cell cycle progression (By similarity). Required for early embryonic development during gastrulation.

Mus musculus (taxid: 10090)

>sp|C9JN71|ZN878_HUMAN Zinc finger protein 878 OS=Homo sapiens GN=ZNF878 PE=3 SV=2

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 25/275 (9%)

Query: 33  PSPAKSPAKSKAGSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGL 92
           PS  +   ++ +G    +  +  K  +  K   V++R+  G KPY+C +C +G+ S    
Sbjct: 267 PSSFQYHERTHSGEKPYECTQCRKAFRSVKYLRVHERKHTGEKPYECKLCGKGFISSTSF 326

Query: 93  QNHLWSH--RKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIG 150
           + H  +H   K  +       ++F +DLR  E    R H       GE   E     K  
Sbjct: 327 RYHEKTHTGEKPYECKKCVKAFSFVKDLRIHE----RTHT------GEKPFECKQCGKT- 375

Query: 151 IREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHT 210
                       T+SN   Y+    +    Y+C  C K   + S L++H++ H  +  + 
Sbjct: 376 -----------FTSSNSFHYHERTHTGEKPYECKQCGKAFRSASVLQKHIRTHTGEKPYG 424

Query: 211 CEICFRIFKTEINLTRHLECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHC 269
           C+ C ++F+    L  H   H   +   C  C + + +++++R H  +H+ E+P+ C  C
Sbjct: 425 CKQCGKVFRVASQLKMHERTHTGEKPYECKQCGKAFISSNSIRYHKRTHTGEKPYKCKQC 484

Query: 270 EKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASS 304
            K F  +    +H   HTGE+PY+C  C + F S+
Sbjct: 485 GKAFISSNSFLYHERIHTGEKPYECKQCGKAFRSA 519

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96EG3|ZN837_HUMAN Zinc finger protein 837 OS=Homo sapiens GN=ZNF837 PE=2 SV=2

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 106/263 (40%), Gaps = 28/263 (10%)

Query: 67  YDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRK-------ILKNSNVGIYYTFTEDLR 119
           + R   G +PY+CA C + +    GL  H  +H         +L      +      D  
Sbjct: 289 HQRIHTGERPYECAECGKAFVRCSGLYRHQKTHSAERHRRGPVLARRAFRLGCPPCGDYS 348

Query: 120 EREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGT 179
           ER            +G GE   E             +  K     S+L+ +   + +   
Sbjct: 349 ERSP-------RRGSGAGEKPYEC-----------ADCAKAFGLFSHLVEHRR-VHTGEK 389

Query: 180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECH-DTVELSC 238
            Y CP C K  N +SNL RH + H     + C +C + FK    L +H   H       C
Sbjct: 390 PYACPECGKAFNQRSNLSRHQRTHSSAKPYACPLCEKAFKGRSGLVQHQRAHTGERPYGC 449

Query: 239 PDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCP 298
            +C + +   S LR H   HS E+P+ C  C K F RN  L  HL  HTGERPY C  C 
Sbjct: 450 SECGKTFRGCSELRQHERLHSGEKPYICRDCGKAFVRNCSLVRHLRTHTGERPYACGDCG 509

Query: 299 RTFASSGNCFSHRKRMHEGETLP 321
           R F+   N   HRKR H G   P
Sbjct: 510 RAFSQRSNLNEHRKR-HGGRAAP 531

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6IV72|ZN425_HUMAN Zinc finger protein 425 OS=Homo sapiens GN=ZNF425 PE=2 SV=1

 Score =  102 bits (253), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 163 TASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEI 222
           T  + L+ +  + S    YQCP C K    K NL+ HL  H  +   +C +C + F  + 
Sbjct: 592 THQSQLTEHLRLHSGEKPYQCPECEKTFRLKGNLKSHLLQHSGQKPFSCVMCGKSFTQQY 651

Query: 223 NLTRHLECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
            LT H+  H   +   CP+C++ Y    +L+ H+  HS ERP  CP C K F + + LK 
Sbjct: 652 RLTEHIRVHSGEKPFQCPECDKSYCIRGSLKVHLYKHSGERPFQCPECGKGFLQKRSLKA 711

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSH 310
           HL  H+GERP+ C  C R+F   G   +H
Sbjct: 712 HLCLHSGERPFSCDECGRSFTYVGALKTH 740

Acts as a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q13105|ZBT17_HUMAN Zinc finger and BTB domain-containing protein 17 OS=Homo sapiens GN=ZBTB17 PE=1 SV=3

 Score =  101 bits (252), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 78/154 (50%), Gaps = 2/154 (1%)

Query: 166 NLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLT 225
           +LL+ +    S   RY+C  C K   T  NL+RH   H  +  + C+ C R F    +  
Sbjct: 375 SLLNLHKKRHSGEARYRCEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKM 434

Query: 226 RHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN 284
           RHLE HDT  E  CP C++ +     L+AH+  H  + P  C  C K F  + +LK HL 
Sbjct: 435 RHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLR 494

Query: 285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            H+GE+PY C  C R FA  G    H  R+H GE
Sbjct: 495 IHSGEKPYVCIHCQRQFADPGALQRH-VRIHTGE 527

May function as a housekeeping DNA-binding protein that regulates the expression of specific genes. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Also has potent growth arrest activity, probably through inhibition of cell cycle progression. Required for early embryonic development during gastrulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  100 bits (250), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 25/250 (10%)

Query: 66  VYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSH--RKILKNSNVGIYYTFTEDLRERED 123
           V+ R   G KP++C  C + +    GL+NH  +H   +  K    G  +     LR    
Sbjct: 467 VHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLR---- 522

Query: 124 GEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQC 183
               KH     G      E P         K N         + L  ++ + +    Y+C
Sbjct: 523 ----KHHRTHTG------EKPY--------KCNQCGKAFGQKSQLRGHHRIHTGEKPYKC 564

Query: 184 PLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE-LSCPDCN 242
             C +  + KSNLR H + H  +  + CE C + F+ + NL  H   H   +   C +C 
Sbjct: 565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 624

Query: 243 RVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFA 302
           + +   S LR H  +H+ E+P+NC  C + F +  +L+ H   HTGE+PYKC  C RTF+
Sbjct: 625 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query: 303 SSGNCFSHRK 312
              +   H+K
Sbjct: 685 QKSSLREHQK 694

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
350410406	450	PREDICTED: zinc finger protein 2-like [B	0.801	0.6	0.421	2e-60
340719437	450	PREDICTED: zinc finger protein 2-like [B	0.801	0.6	0.421	2e-60
307213088	461	Serendipity locus protein H-1 [Harpegnat	0.801	0.585	0.415	2e-60
380029744	450	PREDICTED: zinc finger protein weckle-li	0.602	0.451	0.475	6e-60
328784573	450	PREDICTED: zinc finger protein weckle-li	0.602	0.451	0.475	8e-60
242018849	572	zinc finger protein, putative [Pediculus	0.608	0.358	0.489	3e-59
307184291	458	Serendipity locus protein H-1 [Camponotu	0.602	0.443	0.479	3e-59
383862721	455	PREDICTED: zinc finger protein 354A-like	0.593	0.439	0.473	1e-58
383862723	457	PREDICTED: zinc finger protein 354A-like	0.602	0.444	0.471	1e-58
322800041	464	hypothetical protein SINV_03069 [Solenop	0.602	0.437	0.475	2e-58

>gi|350410406|ref|XP_003489035.1| PREDICTED: zinc finger protein 2-like [Bombus impatiens]

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 180/323 (55%), Gaps = 53/323 (16%)

Query: 5   KENSLLFLY--KEDSSDVTIVKQEVES--TKLPSPAKSPAKSKAGSIVVKSLEHLKD-LK 59
           K + +LFL    E+S+  T    + E   TK  SP   P  +K   I  ++ E   D L+
Sbjct: 167 KVDPMLFLQYGMENSASETSEASDTEEIITKTNSPEPLPLTNKIDEIKKETKEESNDKLQ 226

Query: 60  VTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLR 119
              ++ + +      KP++C IC R + S IGLQNHLWSH                    
Sbjct: 227 EDTEELISNV---STKPHECTICARSFISQIGLQNHLWSH-------------------- 263

Query: 120 EREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGT 179
                                     PK   +  K   +  ++ ++N + + N   +S +
Sbjct: 264 -------------------------LPKDKRLDGKPILRSQQVYSTNGVLHMNTDNNSSS 298

Query: 180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCP 239
            + CP+C+KKI+TK NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  ++  C 
Sbjct: 299 NFICPICSKKISTKGNLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGIQFPCN 358

Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR 299
            C RVYPTNSTLRAH I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+
Sbjct: 359 VCGRVYPTNSTLRAHSITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPK 418

Query: 300 TFASSGNCFSHRKRMHEGETLPD 322
            FASSGNCFSHRKRMH  E   D
Sbjct: 419 AFASSGNCFSHRKRMHPREVHRD 441

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719437|ref|XP_003398160.1| PREDICTED: zinc finger protein 2-like [Bombus terrestris]

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 180/323 (55%), Gaps = 53/323 (16%)

Query: 5   KENSLLFLY--KEDSSDVTIVKQEVES--TKLPSPAKSPAKSKAGSIVVKSLEHLKD-LK 59
           K + +LFL    E+S+  T    + E   TK  SP   P  +K   I  ++ E   D L+
Sbjct: 167 KVDPMLFLQYGMENSASETSEASDTEEIITKTNSPEPLPLTNKIDEIKKETKEESNDKLQ 226

Query: 60  VTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLR 119
              ++ + +      KP++C IC R + S IGLQNHLWSH                    
Sbjct: 227 EDTEELISNV---STKPHECTICARSFISQIGLQNHLWSH-------------------- 263

Query: 120 EREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGT 179
                                     PK   +  K   +  ++ ++N + + N   +S +
Sbjct: 264 -------------------------LPKDKRLDGKPILRSQQVYSTNGVLHMNTDNNSSS 298

Query: 180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCP 239
            + CP+C+KKI+TK NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  ++  C 
Sbjct: 299 NFICPICSKKISTKGNLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGIQFPCN 358

Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR 299
            C RVYPTNSTLRAH I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+
Sbjct: 359 VCGRVYPTNSTLRAHSITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPK 418

Query: 300 TFASSGNCFSHRKRMHEGETLPD 322
            FASSGNCFSHRKRMH  E   D
Sbjct: 419 AFASSGNCFSHRKRMHPREVHRD 441

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213088|gb|EFN88610.1| Serendipity locus protein H-1 [Harpegnathos saltator]

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 175/325 (53%), Gaps = 55/325 (16%)

Query: 5   KENSLLFLY------KEDSSDVTIVKQEVESTKLPSPAKSPAKSKAGSIVVKSLEHLKDL 58
           K + +LFL         ++SD +  ++E+  T  P P     K     +     E  KD 
Sbjct: 176 KVDPMLFLQCGMEHSASETSDSSDNEEEIIRTHSPEPLSLTKKHTEAEV---ETEEKKDE 232

Query: 59  KVTKKKTVYDRR-KNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTED 117
             TK      R   N  KP++C IC R + S IGLQNHLWSH                  
Sbjct: 233 SETKLHEDNGRTVSNTVKPHECTICARSFISQIGLQNHLWSH------------------ 274

Query: 118 LREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSS 177
                                       P++     K   +   + ++N + + N   ++
Sbjct: 275 ---------------------------LPRERKFDGKPILRSQHVYSTNGVLHTNGDNNT 307

Query: 178 GTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
            + + CP+C+KKI+TK NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  V+  
Sbjct: 308 SSNFICPICSKKISTKGNLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGVQFP 367

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           C  C RVYPTNSTLRAH I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+C
Sbjct: 368 CNVCGRVYPTNSTLRAHSITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYC 427

Query: 298 PRTFASSGNCFSHRKRMHEGETLPD 322
           P+ FASSGNCFSHRKRMH  E   D
Sbjct: 428 PKAFASSGNCFSHRKRMHPREVHRD 452

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029744|ref|XP_003698525.1| PREDICTED: zinc finger protein weckle-like [Apis florea]

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/248 (47%), Positives = 148/248 (59%), Gaps = 45/248 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KP++C IC R + S IGLQNHLWSH                                   
Sbjct: 239 KPHECTICARSFISQIGLQNHLWSH----------------------------------- 263

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      PK   +  K   +  ++ ++N + + N   +S   + CP+C+KKI+TK 
Sbjct: 264 ----------LPKDKRLDGKPILRSQQVYSTNGVLHTNTDNNSSGNFVCPICSKKISTKG 313

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  ++  C  C RVYPTNSTLRAH
Sbjct: 314 NLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGIQFPCNVCGRVYPTNSTLRAH 373

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+ FASSGNCFSHRKRM
Sbjct: 374 SITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPKAFASSGNCFSHRKRM 433

Query: 315 HEGETLPD 322
           H  E   D
Sbjct: 434 HPREVHRD 441

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328784573|ref|XP_001122994.2| PREDICTED: zinc finger protein weckle-like [Apis mellifera]

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 118/248 (47%), Positives = 148/248 (59%), Gaps = 45/248 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KP++C IC R + S IGLQNHLWSH                                   
Sbjct: 239 KPHECTICARSFISQIGLQNHLWSH----------------------------------- 263

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      PK   +  K   +  ++ ++N + + N   +S   + CP+C+KKI+TK 
Sbjct: 264 ----------LPKDKRLDGKPILRSQQVYSTNGVLHTNTDNNSSGNFVCPICSKKISTKG 313

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  ++  C  C RVYPTNSTLRAH
Sbjct: 314 NLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGIQFPCNVCGRVYPTNSTLRAH 373

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+ FASSGNCFSHRKRM
Sbjct: 374 SITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPKAFASSGNCFSHRKRM 433

Query: 315 HEGETLPD 322
           H  E   D
Sbjct: 434 HPREVHRD 441

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018849|ref|XP_002429883.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212514917|gb|EEB17145.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 143/241 (59%), Gaps = 36/241 (14%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KPY+C +CPR + +DIGLQNHLWSH    + S                           N
Sbjct: 352 KPYKCTLCPRSFITDIGLQNHLWSHLPKSRKSQ-------------------------SN 386

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
           GG      +  PK I +     +    +  +   S N  +     +Y CP+C KKI+TK 
Sbjct: 387 GG------SMIPKNIDLEGSQVYSSNGVLHTAHPSENPHLL----KYVCPICGKKISTKG 436

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+   I    FKT  NL RH + H  V+  CP C RVYPTNSTLRAH
Sbjct: 437 NLKVHLETHRPKGKYVV-IYVEEFKTAANLFRHKDYHGGVQFPCPVCGRVYPTNSTLRAH 495

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C KTFKRNQDLKFH+NQHTG RPY+CP+CP+ FASSGNCFSHRKRM
Sbjct: 496 SITHSDLRPHKCPLCSKTFKRNQDLKFHINQHTGARPYQCPYCPKAFASSGNCFSHRKRM 555

Query: 315 H 315
           H
Sbjct: 556 H 556

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184291|gb|EFN70749.1| Serendipity locus protein H-1 [Camponotus floridanus]

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 149/248 (60%), Gaps = 45/248 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KPY+C IC R + S IGLQNHLWSH                                   
Sbjct: 247 KPYECTICARSFISQIGLQNHLWSH----------------------------------- 271

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      PK+     K   +   + ++N + + N+  +S + + CP+C+KKI+TK 
Sbjct: 272 ----------LPKERRFDGKPILRSQHVYSTNGVLHTNSDNNSSSNFICPICSKKISTKG 321

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  ++  C  C RVYPTNSTLRAH
Sbjct: 322 NLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGIQFPCNVCGRVYPTNSTLRAH 381

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+ FASSGNCFSHRKRM
Sbjct: 382 SITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPKAFASSGNCFSHRKRM 441

Query: 315 HEGETLPD 322
           H  E   D
Sbjct: 442 HPREVHRD 449

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862721|ref|XP_003706832.1| PREDICTED: zinc finger protein 354A-like isoform 1 [Megachile rotundata]

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 116/245 (47%), Positives = 146/245 (59%), Gaps = 45/245 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KP++C IC R + S IGLQNHLWSH                                   
Sbjct: 244 KPHECTICARSFISQIGLQNHLWSH----------------------------------- 268

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      PK   +  K   +  ++ ++N + + N   +S   + CP+C+K I+TK 
Sbjct: 269 ----------LPKDKRLEGKPILRSQQVYSTNGVLHMNTDNNSSGNFICPICSKTISTKG 318

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL +H E H  ++  C  C RVYPTNSTLRAH
Sbjct: 319 NLKVHLKTHQPKGKYGCDICGRIFKTQPNLFKHKEYHGRIQFPCNVCGRVYPTNSTLRAH 378

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CPR FASSGNCFSHRKRM
Sbjct: 379 SITHSNLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPRAFASSGNCFSHRKRM 438

Query: 315 HEGET 319
           H  E 
Sbjct: 439 HPREV 443

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862723|ref|XP_003706833.1| PREDICTED: zinc finger protein 354A-like isoform 2 [Megachile rotundata]

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/248 (47%), Positives = 147/248 (59%), Gaps = 45/248 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KP++C IC R + S IGLQNHLWSH                                   
Sbjct: 246 KPHECTICARSFISQIGLQNHLWSH----------------------------------- 270

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      PK   +  K   +  ++ ++N + + N   +S   + CP+C+K I+TK 
Sbjct: 271 ----------LPKDKRLEGKPILRSQQVYSTNGVLHMNTDNNSSGNFICPICSKTISTKG 320

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL +H E H  ++  C  C RVYPTNSTLRAH
Sbjct: 321 NLKVHLKTHQPKGKYGCDICGRIFKTQPNLFKHKEYHGRIQFPCNVCGRVYPTNSTLRAH 380

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CPR FASSGNCFSHRKRM
Sbjct: 381 SITHSNLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPRAFASSGNCFSHRKRM 440

Query: 315 HEGETLPD 322
           H  E   D
Sbjct: 441 HPREVHRD 448

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322800041|gb|EFZ21147.1| hypothetical protein SINV_03069 [Solenopsis invicta]

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/248 (47%), Positives = 149/248 (60%), Gaps = 45/248 (18%)

Query: 75  KPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDEN 134
           KP++C IC R + S IGLQNHLWSH                                   
Sbjct: 253 KPHECTICARSFISQIGLQNHLWSH----------------------------------- 277

Query: 135 GGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKS 194
                      P++     K   +   + ++N + + N+  +S + + CP+C+KKI+TK 
Sbjct: 278 ----------LPRERRFDGKPILQSQHVYSTNGVLHTNSDNNSSSNFICPICSKKISTKG 327

Query: 195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH 254
           NL+ HL+ H+PKGK+ C+IC RIFKT+ NL RH E H  V+  C  C RVYPTNSTLRAH
Sbjct: 328 NLKVHLETHRPKGKYGCDICGRIFKTQSNLFRHKEYHGGVQFPCNVCGRVYPTNSTLRAH 387

Query: 255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM 314
            I+HS  RPH CP C+KTFKRNQDLKFH+NQHTG RPY+CP+CP+ FASSGNCFSHRKRM
Sbjct: 388 SITHSDLRPHACPLCDKTFKRNQDLKFHINQHTGARPYQCPYCPKAFASSGNCFSHRKRM 447

Query: 315 HEGETLPD 322
           H  E   D
Sbjct: 448 HPREVHRD 455

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
UNIPROTKB|H9L030	207	H9L030 "Uncharacterized protei	0.415	0.676	0.4	4.3e-32
ZFIN|ZDB-GENE-030131-423	394	wu:fb30e12 "wu:fb30e12" [Danio	0.729	0.624	0.291	6.1e-31
ZFIN|ZDB-GENE-050227-10	338	zgc:113348 "zgc:113348" [Danio	0.516	0.514	0.337	6.1e-31
UNIPROTKB|Q96EG3	531	ZNF837 "Zinc finger protein 83	0.412	0.261	0.412	8.2e-30
ZFIN|ZDB-GENE-081104-275	354	si:ch73-299h12.4 "si:ch73-299h	0.456	0.435	0.360	1.4e-29
RGD|1588700	362	Prdm5 "PR domain containing 5"	0.421	0.392	0.372	1.4e-29
ZFIN|ZDB-GENE-050208-648	428	si:dkey-253d23.9 "si:dkey-253d	0.454	0.357	0.345	2.3e-29
UNIPROTKB|G5E6Q2	560	LOC100138869 "Uncharacterized	0.445	0.267	0.375	2.7e-29
UNIPROTKB|E2RJR8	554	ZNF358 "Uncharacterized protei	0.445	0.270	0.375	4.2e-29
UNIPROTKB|Q9NW07	568	ZNF358 "Zinc finger protein 35	0.445	0.264	0.375	5e-29

UNIPROTKB|H9L030 H9L030 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 312 (114.9 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 58/145 (40%), Positives = 85/145 (58%)

Query:   177 SGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE 235
             +G R Y+CP+C K   + S+L+ H + H  +    C +C + FK+  NL RH   H T E
Sbjct:    33 TGDRPYKCPICGKGYKSSSHLKSHQRIHTGERPFKCPVCGKSFKSSSNLIRHQHIH-TGE 91

Query:   236 --LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK 293
                 CP+C   + ++S L  H   H+ ERP+ CP C K+F+R+ +L  H   HTGERP+K
Sbjct:    92 RPFKCPECEESFKSSSDLIYHQSIHTGERPYKCPECGKSFRRSSNLTIHHRIHTGERPFK 151

Query:   294 CPFCPRTFASSGNCFSHRKRMHEGE 318
             CP CP++F SS +   H+  +H GE
Sbjct:   152 CPQCPKSFKSSSHLIYHQL-IHTGE 175

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-423 wu:fb30e12 "wu:fb30e12" [Danio rerio (taxid:7955)]

 Score = 316 (116.3 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 76/261 (29%), Positives = 127/261 (48%)

Query:    75 KPYQCAICPRGYYSDIGLQNHLWSHRKILKN--SNVGIYYTFTEDLRERE---DGEK--R 127
             +PY C++C R +      + H  +H K+  +  +  G  +T    L++ +    G K  +
Sbjct:   133 RPYSCSVCGRSFSRLDSCKQHQKTHDKVRDHVCTECGKSFTTFSQLKQHQIIHSGLKPFK 192

Query:   128 KHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITAS--NLLSYNNAM-FSSGTR-YQC 183
               + D +       ++   ++I   EK + + T+   S  +L    N M   SG + Y C
Sbjct:   193 CSYCDRSFTQAGNRKSH--ERIHTGEKPH-RCTECGRSYKDLTGLKNHMRVHSGEKQYVC 249

Query:   184 PLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHD-TVELSCPDCN 242
               C K  N+ SN+R HL+ H  +  H C +C R F   ++ T H + H    +  C DC 
Sbjct:   250 EHCGKGFNSVSNMRYHLRVHTNEKPHVCSVCGRGFSLLVSCTLHEKIHTGEKDKVCDDCG 309

Query:   243 RVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFA 302
             + + TN  L+ H + HS +RP+ C +CEK+F  +  LK H+  HTGE PY+C  C  +F 
Sbjct:   310 KSFVTNGQLKRHRVVHSGKRPYQCSYCEKSFSVSAHLKIHMRLHTGEMPYRCADCGESFR 369

Query:   303 SSGNCFSHRKRMHEGETLPDI 323
              S +   HR++  + E  P +
Sbjct:   370 HSNSLAIHRRKHDQPEQSPPV 390

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-050227-10 zgc:113348 "zgc:113348" [Danio rerio (taxid:7955)]

 Score = 298 (110.0 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 59/175 (33%), Positives = 91/175 (52%)

Query:   163 TASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEI 222
             T+ N+L  + +       + C  C+K   T SNLR+HL+ H  +  H C +C + F    
Sbjct:   154 TSKNVLKDHLSRHIGVKAFSCDQCDKTFVTASNLRKHLKVHTGEKPHLCTLCKKCFSRPE 213

Query:   223 NLTRHLECHDTVELS-CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
             +L  HL  H  V+   C DC + + T S L++H  +HS E+P  C HCEK+F    +LK+
Sbjct:   214 HLQVHLYIHTGVKPHVCSDCGKSFKTPSNLKSHQKTHSGEKPFKCSHCEKSFTFPGNLKY 273

Query:   282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMSDNETEEA 336
             H   HTGE+PYKC  C ++F    N  +H K+    +       ++ + NE E +
Sbjct:   274 HERVHTGEKPYKCSTCGKSFGFLANVRAHEKKNLCKKPASSTPSEQSTSNEGESS 328

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q96EG3 ZNF837 "Zinc finger protein 837" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 8.2e-30, Sum P(2) = 8.2e-30
 Identities = 59/143 (41%), Positives = 71/143 (49%)

Query:   181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE--LSC 238
             Y CP C K  N +SNL RH + H     + C +C + FK    L +H   H T E    C
Sbjct:   391 YACPECGKAFNQRSNLSRHQRTHSSAKPYACPLCEKAFKGRSGLVQHQRAH-TGERPYGC 449

Query:   239 PDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCP 298
              +C + +   S LR H   HS E+P+ C  C K F RN  L  HL  HTGERPY C  C 
Sbjct:   450 SECGKTFRGCSELRQHERLHSGEKPYICRDCGKAFVRNCSLVRHLRTHTGERPYACGDCG 509

Query:   299 RTFASSGNCFSHRKRMHEGETLP 321
             R F+   N   HRKR H G   P
Sbjct:   510 RAFSQRSNLNEHRKR-HGGRAAP 531

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-081104-275 si:ch73-299h12.4 "si:ch73-299h12.4" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 58/161 (36%), Positives = 88/161 (54%)

Query:   163 TASNLLSYNNAMFSSGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTE 221
             T S+L S+      +G + + C  C K   + +NLR+H + H     H C  C + F   
Sbjct:   198 TESSLNSHQR--IHTGVKPFSCDQCEKTFVSAANLRKHFEVHSGLKPHCCSSCGKSFSRM 255

Query:   222 INLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDL 279
              NL  HL  H T E   +C DC +   ++S L+ H   H+ E+P+ C HCEK+F  +  L
Sbjct:   256 ENLQVHLRIH-TGERPYTCSDCGKSCSSSSALKTHQRIHTGEKPYKCSHCEKSFGYSSVL 314

Query:   280 KFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETL 320
             K H   HTGE+P++C  C ++F+ SGN  +H+K +H G+ L
Sbjct:   315 KVHQRIHTGEKPHQCSHCEKSFSYSGNLKAHQK-VHSGKKL 354

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1588700 Prdm5 "PR domain containing 5" [Rattus norvegicus (taxid:10116)]

 Score = 284 (105.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query:   176 SSGTRYQCPLCNKKINTKSNLRRHLQA-HKPKGKHTCEICFRIFKTEINLTRHLECHD-T 233
             +S   ++C  C+     K  L  H+Q  H+   K+ CE+C + F T   L  H + H   
Sbjct:   212 NSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCSKAFVTPSVLRSHKKTHTGE 271

Query:   234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK 293
              E  CP C + + ++ TLR H+ SH+ ERP+ CP+CEK F +N  LK H+  HT E+PY+
Sbjct:   272 KEKVCPYCGQKFASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTREKPYQ 331

Query:   294 CPFCPRTFASSGNCFSHRKRMHEGE 318
             C  C + F+       H KR H GE
Sbjct:   332 CSECSKAFSQKRGLDEH-KRTHTGE 355

GO:0000278 "mitotic cell cycle" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016575 "histone deacetylation" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0051567 "histone H3-K9 methylation" evidence=ISO

GO:0070491 "repressing transcription factor binding" evidence=ISO

ZFIN|ZDB-GENE-050208-648 si:dkey-253d23.9 "si:dkey-253d23.9" [Danio rerio (taxid:7955)]

 Score = 292 (107.8 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 55/159 (34%), Positives = 89/159 (55%)

Query:   156 NWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICF 215
             ++++  +  ++LLS++         Y+C  C+K       LR HL+ H  +  + C +C 
Sbjct:   269 SFRRYDVFKAHLLSHSRERI-----YKCDQCDKSFFRLDFLRDHLKIHTDERPYVCYLCG 323

Query:   216 RIFKTEINLTRHLECHDTV-ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFK 274
             R F+    L  H + HD V +  C +C + + T   L+AH  +HSTE P+ C HC+K+FK
Sbjct:   324 RSFRFMSALKSHQKRHDGVKDHICSECGKTFITYKALKAHQSTHSTETPYKCSHCDKSFK 383

Query:   275 RNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKR 313
             ++Q LK H   HTGE+PY+C  C + F  S + + H+KR
Sbjct:   384 KSQYLKIHEKSHTGEQPYQCNLCGKRFTYSTSLYGHKKR 422

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|G5E6Q2 LOC100138869 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 297 (109.6 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
 Identities = 59/157 (37%), Positives = 82/157 (52%)

Query:   165 SNLLSYNNAMFSSGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN 223
             S LL + ++   SG + + CP+C K     S L +HL+ H     H C +C + F     
Sbjct:   227 STLLKHRSS--HSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSA 284

Query:   224 LTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
             L +HL  H T E    CP C + +  +S L  H  +H+ ERP+ CPHC K F ++ +L+ 
Sbjct:   285 LLKHLRTH-TGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQH 343

Query:   282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             HL  HTGERPY CP C + F  S     H   +H GE
Sbjct:   344 HLRTHTGERPYACPHCSKAFGQSSALLQHL-HVHSGE 379

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2RJR8 ZNF358 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 295 (108.9 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
 Identities = 59/157 (37%), Positives = 82/157 (52%)

Query:   165 SNLLSYNNAMFSSGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN 223
             S LL + ++   SG + + CP+C K     S L +HL+ H     H C +C + F     
Sbjct:   220 STLLKHRSS--HSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSA 277

Query:   224 LTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
             L +HL  H T E    CP C + +  +S L  H  +H+ ERP+ CPHC K F ++ +L+ 
Sbjct:   278 LLKHLRTH-TGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQH 336

Query:   282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             HL  HTGERPY CP C + F  S     H   +H GE
Sbjct:   337 HLRIHTGERPYACPHCSKAFGQSSALLQHL-HVHSGE 372

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9NW07 ZNF358 "Zinc finger protein 358" [Homo sapiens (taxid:9606)]

 Score = 295 (108.9 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
 Identities = 59/157 (37%), Positives = 82/157 (52%)

Query:   165 SNLLSYNNAMFSSGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN 223
             S LL + ++   SG + + CP+C K     S L +HL+ H     H C +C + F     
Sbjct:   220 STLLKHRSS--HSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSA 277

Query:   224 LTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF 281
             L +HL  H T E    CP C + +  +S L  H  +H+ ERP+ CPHC K F ++ +L+ 
Sbjct:   278 LLKHLRTH-TGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQH 336

Query:   282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             HL  HTGERPY CP C + F  S     H   +H GE
Sbjct:   337 HLRIHTGERPYACPHCSKAFGQSSALLQHL-HVHSGE 372

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=ISS

GO:0021915 "neural tube development" evidence=ISS

GO:0019827 "stem cell maintenance" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	337
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 14/26 (53%), Positives = 21/26 (80%)

Query: 278 DLKFHLNQHTGERPYKCPFCPRTFAS 303
           +L+ H+  HTGE+PYKCP C ++F+S
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 251 LRAHMISHSTERPHNCPHCEKTFKR 275
           LR HM +H+ E+P+ CP C K+F  
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	337
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG3623|consensus	1007		99.91
KOG3608|consensus	467		99.88
KOG3608|consensus	467		99.85
KOG1074|consensus	958		99.84
KOG3576|consensus	267		99.72
KOG3576|consensus	267		99.66
KOG3623|consensus	1007		99.57
PLN03086	567	PRLI-interacting factor K; Provisional	99.35
PHA00733	128	hypothetical protein	99.23
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
PHA00733	128	hypothetical protein	99.07
PHA02768	55	hypothetical protein; Provisional	99.05
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.85
KOG3993|consensus	500		98.84
PHA02768	55	hypothetical protein; Provisional	98.82
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.6
KOG3993|consensus	500		98.58
PHA00616	44	hypothetical protein	98.55
PHA00732	79	hypothetical protein	98.38
PHA00616	44	hypothetical protein	98.28
PHA00732	79	hypothetical protein	98.12
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.0
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.82
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.67
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.62
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.51
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.47
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.45
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.93
smart00355	26	ZnF_C2H2 zinc finger.	96.83
PRK04860	160	hypothetical protein; Provisional	96.82
smart00355	26	ZnF_C2H2 zinc finger.	96.8
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.71
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.61
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.5
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.48
KOG2231|consensus	669		96.36
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.2
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.11
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.96
PRK04860	160	hypothetical protein; Provisional	95.59
KOG1146|consensus	1406		95.22
KOG2231|consensus	669		94.92
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.84
KOG1146|consensus	1406		94.78
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.68
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.78
KOG2785|consensus	390		93.71
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.52
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.49
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.67
COG5048	467	FOG: Zn-finger [General function prediction only]	92.58
KOG2893|consensus	341		92.06
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.2
COG5048	467	FOG: Zn-finger [General function prediction only]	90.5
KOG2482|consensus	423		90.27
KOG4173|consensus	253		90.11
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.95
KOG2482|consensus	423		89.73
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.65
COG4049	65	Uncharacterized protein containing archaeal-type C	88.99
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	88.88
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.82
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.71
COG4049	65	Uncharacterized protein containing archaeal-type C	87.22
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	85.64
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	85.33
KOG2893|consensus	341		85.12
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.6
KOG4173|consensus	253		82.53
KOG2186|consensus	276		81.55
PF12907	40	zf-met2: Zinc-binding	81.0
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	80.92

>KOG2462|consensus

Probab=99.96  E-value=1.2e-30  Score=213.65  Aligned_cols=137  Identities=31%  Similarity=0.694  Sum_probs=129.1

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCC---CCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHH
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKP---KGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRA  253 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~  253 (337)
                      ....|.|+.|++.+.+.++|.+|...|..   .+.+.|..||+.|.+..+|..|+++|. .+++|.+|||.|..++.|+-
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhc
Confidence            34569999999999999999999999864   567999999999999999999999996 67899999999999999999


Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhh
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM  314 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~  314 (337)
                      |++.|+|||||.|..|+++|...++|+.|+++|.+.++|+|..|+|.|...+.|.+|....
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999997543

>KOG1074|consensus

Probab=99.95  E-value=8.6e-29  Score=228.32  Aligned_cols=144  Identities=31%  Similarity=0.627  Sum_probs=128.8

Q ss_pred             CcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCc-----cccCC---ccCCCCCCHHH
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTV-----ELSCP---DCNRVYPTNST  250 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~---~C~~~f~~~~~  250 (337)
                      .+-.|-+|-++..-++.|+.|.++|+|++||+|.+||+.|.++.+|+.|+.+|..+     .+.|+   +|.+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            46789999999999999999999999999999999999999999999999998643     47888   88888888888


Q ss_pred             HHHHHHHhCCC---------------------------------------------------------------------
Q psy13793        251 LRAHMISHSTE---------------------------------------------------------------------  261 (337)
Q Consensus       251 l~~H~~~h~~~---------------------------------------------------------------------  261 (337)
                      |.+|+++|.+.                                                                     
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccc
Confidence            88888887621                                                                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy13793        262 --------------------------------------------------------------------------------  261 (337)
Q Consensus       262 --------------------------------------------------------------------------------  261 (337)
                                                                                                      
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHH
Q psy13793        262 ----------------------------------RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNC  307 (337)
Q Consensus       262 ----------------------------------k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L  307 (337)
                                                        ....|.+|++.|...+.|..|+|+|+|++||.|.+|++.|+.+.+|
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhh
Confidence                                              1267999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCCC
Q psy13793        308 FSHRKRMHEGETLPDI  323 (337)
Q Consensus       308 ~~H~~~~H~~~~~~~~  323 (337)
                      ..|| ..|....++..
T Consensus       924 KvHM-gtH~w~q~~sr  938 (958)
T KOG1074|consen  924 KVHM-GTHMWVQPPSR  938 (958)
T ss_pred             hhhh-ccccccCCCcc
Confidence            9997 69987766643

>KOG2462|consensus

Probab=99.94  E-value=6.7e-27  Score=191.64  Aligned_cols=138  Identities=30%  Similarity=0.639  Sum_probs=126.4

Q ss_pred             CCCceecCCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcccCcc
Q psy13793         73 GPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIR  152 (337)
Q Consensus        73 ~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (337)
                      ....|+|+.||+.+.+.++|.+|.++|...                                                  
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~--------------------------------------------------  156 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSL--------------------------------------------------  156 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccc--------------------------------------------------
Confidence            445699999999999999999999999431                                                  


Q ss_pred             ccccccccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcC
Q psy13793        153 EKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHD  232 (337)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  232 (337)
                                             ...+.+.|++|++.|.....|..|+++|+  -+++|.+||+.|+....|.-|+|+|+
T Consensus       157 -----------------------~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHT  211 (279)
T KOG2462|consen  157 -----------------------DSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHT  211 (279)
T ss_pred             -----------------------cccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccccccc
Confidence                                   01244889999999999999999999997  68999999999999999999999998


Q ss_pred             C-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHh
Q psy13793        233 T-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ  285 (337)
Q Consensus       233 ~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~  285 (337)
                      + +||.|+.|+++|.++++|+.||.+|.+.|+|.|..|+|+|...+.|.+|...
T Consensus       212 GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  212 GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             CCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            7 8999999999999999999999999999999999999999999999999764

>KOG3623|consensus

Probab=99.91  E-value=8.2e-26  Score=205.48  Aligned_cols=77  Identities=34%  Similarity=0.757  Sum_probs=74.8

Q ss_pred             cccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHH
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      .|.|..|+|+|...++|.+|..-|+|.+||.|.+|.++|..+..|..|+|.|.|++||+|..|+|+|+..++...||
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999995

>KOG3608|consensus

Probab=99.88  E-value=4.2e-23  Score=173.62  Aligned_cols=190  Identities=22%  Similarity=0.435  Sum_probs=151.6

Q ss_pred             CCCCCcCCChhHHHhHHhhccC--ccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcccCccccccc
Q psy13793         80 AICPRGYYSDIGLQNHLWSHRK--ILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNW  157 (337)
Q Consensus        80 ~~C~~~F~~~~~L~~H~~~H~~--~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (337)
                      ..|.+.|.++..|++|++.|.+  ...|+.||.-|.....|..|.....                               
T Consensus       183 ~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt-------------------------------  231 (467)
T KOG3608|consen  183 AMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQT-------------------------------  231 (467)
T ss_pred             hhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhh-------------------------------
Confidence            4566666666666666666655  3466666666665555544421110                               


Q ss_pred             cccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC--cc
Q psy13793        158 KKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT--VE  235 (337)
Q Consensus       158 ~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~  235 (337)
                                       .....+|.|..|.+.|.+...|..|+..|..  -|+|..|..+....++|.+|++..+.  ++
T Consensus       232 -----------------~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  232 -----------------ELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             -----------------hhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCC
Confidence                             0012369999999999999999999999854  69999999999999999999987544  78


Q ss_pred             ccCCccCCCCCCHHHHHHHHHHhCCCCCccccc--cchhccCHHHHHHHHHh-ccCC--CCeecCCCccccCCchHHHHH
Q psy13793        236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQ-HTGE--RPYKCPFCPRTFASSGNCFSH  310 (337)
Q Consensus       236 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~-H~~~--~~~~C~~C~k~f~~~~~L~~H  310 (337)
                      |+|..|.+.|...+.|.+|...|. +-.|.|..  |..+|.+...|.+|++. |.|.  .+|.|..|.+.|++-.+|..|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~H  371 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAH  371 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHH
Confidence            999999999999999999999887 67799988  99999999999999985 5454  469999999999999999999


Q ss_pred             HHhhCCCCCC
Q psy13793        311 RKRMHEGETL  320 (337)
Q Consensus       311 ~~~~H~~~~~  320 (337)
                      +.+.|.=.=|
T Consensus       372 L~kkH~f~~P  381 (467)
T KOG3608|consen  372 LMKKHGFRLP  381 (467)
T ss_pred             HHHhhcccCC
Confidence            9999864433

>KOG3608|consensus

Probab=99.85  E-value=4.4e-21  Score=161.48  Aligned_cols=157  Identities=27%  Similarity=0.511  Sum_probs=141.7

Q ss_pred             cCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcC--CCCccccccccccccCHHHHHHHHHhcCCccccCC
Q psy13793        162 ITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHK--PKGKHTCEICFRIFKTEINLTRHLECHDTVELSCP  239 (337)
Q Consensus       162 ~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~  239 (337)
                      +.....|..|.+.|++++-..|+.|+.-|.++..|-.|++..+  ...+|.|..|.+.|.+...|..|+..|- .-|+|+
T Consensus       189 ~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv-n~ykCp  267 (467)
T KOG3608|consen  189 MGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV-NCYKCP  267 (467)
T ss_pred             hccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh-hccccc
Confidence            4444567778999999999999999999999999999997543  5679999999999999999999999874 458999


Q ss_pred             ccCCCCCCHHHHHHHHH-HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC--CccccCCchHHHHHHHhhCC
Q psy13793        240 DCNRVYPTNSTLRAHMI-SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       240 ~C~~~f~~~~~l~~H~~-~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~  316 (337)
                      .|......+++|..|++ .|...|||+|..|++.|.+.++|.+|..+|+ +-.|+|..  |...|.+...|.+|++.+|.
T Consensus       268 lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhE  346 (467)
T KOG3608|consen  268 LCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHE  346 (467)
T ss_pred             ccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhcc
Confidence            99999999999999987 5888999999999999999999999999998 78899998  99999999999999989997


Q ss_pred             CCCC
Q psy13793        317 GETL  320 (337)
Q Consensus       317 ~~~~  320 (337)
                      |..+
T Consensus       347 g~np  350 (467)
T KOG3608|consen  347 GNNP  350 (467)
T ss_pred             CCCC
Confidence            7643

>KOG1074|consensus

Probab=99.84  E-value=3.1e-22  Score=185.35  Aligned_cols=85  Identities=31%  Similarity=0.658  Sum_probs=76.8

Q ss_pred             ccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCC----CCeecC---CCccccCCchHHH
Q psy13793        236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE----RPYKCP---FCPRTFASSGNCF  308 (337)
Q Consensus       236 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~----~~~~C~---~C~k~f~~~~~L~  308 (337)
                      -.|-+|.++..-++.|+.|++.|+||+||+|.+||++|+++.+|+.|+-+|-..    -+|.|+   +|-+.|+..-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            459999999999999999999999999999999999999999999999998665    358999   9999999999999


Q ss_pred             HHHHhhCCCCCCC
Q psy13793        309 SHRKRMHEGETLP  321 (337)
Q Consensus       309 ~H~~~~H~~~~~~  321 (337)
                      .|+ ++|.+-.++
T Consensus       686 QhI-riH~~~~~s  697 (958)
T KOG1074|consen  686 QHI-RIHLGGQIS  697 (958)
T ss_pred             ceE-EeecCCCCC
Confidence            997 999854433

>KOG3576|consensus

Probab=99.72  E-value=2.9e-18  Score=133.91  Aligned_cols=108  Identities=31%  Similarity=0.586  Sum_probs=61.2

Q ss_pred             cccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhcc
Q psy13793        209 HTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       209 ~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      |.|.+||+.|.....|.+|++.|.. +.+-|..||+.|.+...|.+|+++|+|.+||+|..|+++|++.-.|..|++.-+
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            4555555555555555555555443 334555555555555556666666666666666666666666666666655322


Q ss_pred             C-----------CCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        288 G-----------ERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       288 ~-----------~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      |           .+.|.|+.||.+-.....+..|++..|+
T Consensus       198 gv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  198 GVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             CchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            2           2456666666666666666666655554

>KOG3576|consensus

Probab=99.66  E-value=2.8e-17  Score=128.46  Aligned_cols=114  Identities=25%  Similarity=0.518  Sum_probs=104.4

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHH
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHM  255 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~  255 (337)
                      +...|.|.+|++.|.....|.+|++-|...+.|.|..||+.|.....|++|+++|++ ++|+|..|+++|+.+-+|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            356699999999999999999999999999999999999999999999999999998 8999999999999999999998


Q ss_pred             HHhCC-----------CCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        256 ISHST-----------ERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       256 ~~h~~-----------~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ..-+|           .|.|.|+.||.+-.....+..|++.|+..-
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            75443           467999999999999999999999876543

>KOG3623|consensus

Probab=99.57  E-value=1e-15  Score=140.39  Aligned_cols=118  Identities=29%  Similarity=0.631  Sum_probs=77.4

Q ss_pred             ccccccccccCCHHHHHHHHHHcC--CCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHh
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHK--PKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISH  258 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  258 (337)
                      ..|++|.+.+.....|+.|++..+  .+..|.|..|..+|.++..|.+|+.+|....-       .-       .+...-
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~d-------qa-------~sltqs  276 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGD-------QA-------ISLTQS  276 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCc-------cc-------ccccch
Confidence            446666666655566666654321  23345555555555555555555555532110       00       011111


Q ss_pred             CCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHH
Q psy13793        259 STERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRK  312 (337)
Q Consensus       259 ~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  312 (337)
                      .+.+.|+|.+||++|..+..|+.|+|+|.|++||.|+-|+|+|+..++...||.
T Consensus       277 a~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  277 ALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            133669999999999999999999999999999999999999999999888874

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.35  E-value=2.3e-12  Score=119.15  Aligned_cols=104  Identities=23%  Similarity=0.465  Sum_probs=91.4

Q ss_pred             CccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhcc----------CH
Q psy13793        207 GKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFK----------RN  276 (337)
Q Consensus       207 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~----------~~  276 (337)
                      .++.|..|++.|. ...|..|+..++ .++.|+ ||+.+ .+..|..|+..|.+.+|+.|..|++.|.          ..
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H-kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH-EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC-CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhh
Confidence            4578999999996 678999999986 789999 99755 6799999999999999999999999985          24


Q ss_pred             HHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        277 QDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       277 ~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +.|..|..++ |.+++.|..||+.|..+ .|..|+..+|.
T Consensus       528 s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        528 RGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            6899999986 99999999999999877 68999988885

>PHA00733 hypothetical protein

Probab=99.23  E-value=1.3e-11  Score=93.58  Aligned_cols=55  Identities=27%  Similarity=0.593  Sum_probs=41.9

Q ss_pred             CCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhC
Q psy13793        259 STERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       259 ~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      .+.+||.|..|++.|.+.+.|..|++.|  +.+|.|++|++.|.....|..|+...|
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            3467788888888888888888887765  346788888888888888888876666

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=6.1e-10  Score=103.37  Aligned_cols=98  Identities=13%  Similarity=0.388  Sum_probs=82.8

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCC----------HH
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPT----------NS  249 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~----------~~  249 (337)
                      +.|+.|++.|. ...|..|+..++  .++.|. ||..+ ....|..|+..|.. +++.|..|++.|..          .+
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            68999999996 688999999986  789999 99765 67899999998875 78899999999952          45


Q ss_pred             HHHHHHHHhCCCCCccccccchhccCHHHHHHHHHh
Q psy13793        250 TLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ  285 (337)
Q Consensus       250 ~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~  285 (337)
                      .|..|.... |.+++.|..|++.+... .|..|+..
T Consensus       529 ~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        529 GMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             hHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            899998885 99999999999888764 57778764

>PHA00733 hypothetical protein

Probab=99.07  E-value=2.3e-10  Score=86.76  Aligned_cols=60  Identities=22%  Similarity=0.473  Sum_probs=40.9

Q ss_pred             HHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccC
Q psy13793        227 HLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       227 H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      |+..+...+|.|+.|++.|.+...|..|++.|  +.+|.|.+|++.|.....|..|++..++
T Consensus        65 ~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         65 LLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             hcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            33444456677777777777777777777655  3467777777777777777777776554

>PHA02768 hypothetical protein; Provisional

Probab=99.05  E-value=7.9e-11  Score=73.29  Aligned_cols=43  Identities=23%  Similarity=0.542  Sum_probs=36.8

Q ss_pred             ccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHH
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCF  308 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~  308 (337)
                      |.|+.||+.|.+.+.|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            789999999999999999999888  6888999999888777654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.85  E-value=2.3e-09  Score=57.08  Aligned_cols=26  Identities=50%  Similarity=1.307  Sum_probs=20.6

Q ss_pred             HHHHHHHhccCCCCeecCCCccccCC
Q psy13793        278 DLKFHLNQHTGERPYKCPFCPRTFAS  303 (337)
Q Consensus       278 ~L~~H~~~H~~~~~~~C~~C~k~f~~  303 (337)
                      +|.+|+++|+|++||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888888863

...

>KOG3993|consensus

Probab=98.84  E-value=3.5e-10  Score=98.52  Aligned_cols=52  Identities=27%  Similarity=0.503  Sum_probs=43.6

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcC
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHD  232 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  232 (337)
                      |.|..|...|.+...|-+|.-.-.-..-|.|.+|++.|+-..+|..|.++|-
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            8999999999999999999854333345899999999999999999999884

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=1.6e-09  Score=67.51  Aligned_cols=44  Identities=18%  Similarity=0.488  Sum_probs=35.0

Q ss_pred             cccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHH
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLK  280 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~  280 (337)
                      .|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4678888888888888888888887  6888888888888766654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.60  E-value=2.9e-08  Score=52.83  Aligned_cols=26  Identities=46%  Similarity=0.981  Sum_probs=23.9

Q ss_pred             HHHHHHHHhCCCCCccccccchhccC
Q psy13793        250 TLRAHMISHSTERPHNCPHCEKTFKR  275 (337)
Q Consensus       250 ~l~~H~~~h~~~k~~~C~~C~~~f~~  275 (337)
                      +|..|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999964

...

>KOG3993|consensus

Probab=98.58  E-value=4.4e-09  Score=91.77  Aligned_cols=215  Identities=16%  Similarity=0.204  Sum_probs=114.4

Q ss_pred             eecCCCCCcCCChhHHHhHH--hhccCccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcccCcccc
Q psy13793         77 YQCAICPRGYYSDIGLQNHL--WSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIREK  154 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~--~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (337)
                      |.|..|...|.....|.+|.  ++=+.+|+|++|++.|.....|..|..=.+....-...+...       ++.. ...+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P-------~k~~-~~~r  339 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPP-------PKQA-VETR  339 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCC-------hhhh-hhhh
Confidence            99999999999999999997  445668999999999999999988763222211111101000       0000 0000


Q ss_pred             ccccccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCc
Q psy13793        155 VNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTV  234 (337)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  234 (337)
                      .........-         .-+.+..|.|..|++.|.....|+.|+..|+....-.=.  ...|.....        ...
T Consensus       340 ae~~ea~rsg---------~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~--a~~f~~s~~--------~~l  400 (500)
T KOG3993|consen  340 AEVQEAERSG---------DDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK--APKFLLSRV--------IPL  400 (500)
T ss_pred             hhhhhccccC---------CcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc--ccCcchhhc--------ccc
Confidence            0000000000         002234688999999999999999998777532110000  011111000        001


Q ss_pred             cccCCccCCCCCCHHHHHHHHHHhCC-CCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHh
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMISHST-ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKR  313 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  313 (337)
                      -+.|..|+-.+.....-..+...+.+ ..-..|..|+..+.++..=..+.+.-..+-.|.|.+|.-.|.+...|.+|+..
T Consensus       401 ~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  401 MHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             cccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence            12233333333222211111111111 11134555665555554444444443445578888898888888889999888


Q ss_pred             hCCCC
Q psy13793        314 MHEGE  318 (337)
Q Consensus       314 ~H~~~  318 (337)
                      .|..+
T Consensus       481 ~Hpse  485 (500)
T KOG3993|consen  481 CHPSE  485 (500)
T ss_pred             cChHH
Confidence            88755

>PHA00616 hypothetical protein

Probab=98.55  E-value=3.6e-08  Score=58.38  Aligned_cols=39  Identities=15%  Similarity=0.303  Sum_probs=31.4

Q ss_pred             CccccccchhccCHHHHHHHHHhccCCCCeecCCCcccc
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTF  301 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f  301 (337)
                      ||.|+.||+.|...+.|..|++.|+|++++.|++--..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            688888888888888888888888888888887644443

>PHA00732 hypothetical protein

Probab=98.38  E-value=2.2e-07  Score=63.78  Aligned_cols=43  Identities=33%  Similarity=0.551  Sum_probs=23.8

Q ss_pred             CccccccchhccCHHHHHHHHHh-ccCCCCeecCCCccccCCchHHHHHH
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQ-HTGERPYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      ||.|..|++.|.+.+.|..|++. |+   ++.|+.||+.|.   .|..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhh
Confidence            45566666666666666666553 33   235666666665   245554

>PHA00616 hypothetical protein

Probab=98.28  E-value=4.1e-07  Score=53.93  Aligned_cols=39  Identities=28%  Similarity=0.451  Sum_probs=33.9

Q ss_pred             cccccccccccCCHHHHHHHHHHcCCCCccccccccccc
Q psy13793        180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIF  218 (337)
Q Consensus       180 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  218 (337)
                      ||+|+.||+.|.+++.|..|++.|++++++.|+.--..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            589999999999999999999999999999987644444

>PHA00732 hypothetical protein

Probab=98.12  E-value=2.1e-06  Score=58.99  Aligned_cols=48  Identities=27%  Similarity=0.575  Sum_probs=32.1

Q ss_pred             cccCCccCCCCCCHHHHHHHHHH-hCCCCCccccccchhccCHHHHHHHHHhccC
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMIS-HSTERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      +|.|..|++.|.....|..|++. |.   ++.|+.|++.|.   .|..|.+++.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            35677777777777777777764 43   356777877777   36667765443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.00  E-value=1.1e-05  Score=51.38  Aligned_cols=49  Identities=29%  Similarity=0.567  Sum_probs=28.5

Q ss_pred             ccccccchhccCHHHHHHHHH-hccCC-CCeecCCCccccCCchHHHHHHHhhC
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLN-QHTGE-RPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~-~H~~~-~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |.|+.|++ ..+...|..|.. .|..+ +.+.|++|...++  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            56666666 344556666655 34443 3566777766544  36677765555

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.85  E-value=4e-05  Score=48.79  Aligned_cols=50  Identities=28%  Similarity=0.589  Sum_probs=35.1

Q ss_pred             cccCCccCCCCCCHHHHHHHHHH-hCC-CCCccccccchhccCHHHHHHHHHhcc
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMIS-HST-ERPHNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~k~~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      .|.|+.|++ ..+...|..|... |.. .+.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            477888888 4556778888654 444 35688888887654  38888887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.83  E-value=9.8e-06  Score=41.69  Aligned_cols=21  Identities=43%  Similarity=0.980  Sum_probs=13.8

Q ss_pred             eecCCCccccCCchHHHHHHH
Q psy13793        292 YKCPFCPRTFASSGNCFSHRK  312 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~  312 (337)
                      |+|++|++.|.++..|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            566666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.82  E-value=8.5e-06  Score=41.94  Aligned_cols=23  Identities=35%  Similarity=0.889  Sum_probs=21.5

Q ss_pred             eecCCCCCcCCChhHHHhHHhhc
Q psy13793         77 YQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.67  E-value=1.4e-05  Score=67.80  Aligned_cols=52  Identities=31%  Similarity=0.842  Sum_probs=44.7

Q ss_pred             CCCCccccc--cchhccCHHHHHHHHHh-cc------------------CCCCeecCCCccccCCchHHHHHH
Q psy13793        260 TERPHNCPH--CEKTFKRNQDLKFHLNQ-HT------------------GERPYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       260 ~~k~~~C~~--C~~~f~~~~~L~~H~~~-H~------------------~~~~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      ++|||+|++  |.+.|.....|+.|+.- |-                  ..+||+|++|+|.|..-..|.-|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            359999987  99999999999999763 41                  248999999999999999999994

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.63  E-value=2.7e-05  Score=41.76  Aligned_cols=25  Identities=32%  Similarity=0.656  Sum_probs=23.4

Q ss_pred             ceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998875

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.62  E-value=4.9e-05  Score=39.32  Aligned_cols=24  Identities=29%  Similarity=0.802  Sum_probs=13.5

Q ss_pred             eecCCCccccCCchHHHHHHHhhC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |.|++|++.|.+...|..|+...|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            556666666666666666654433

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=4.9e-05  Score=39.34  Aligned_cols=24  Identities=33%  Similarity=0.854  Sum_probs=20.1

Q ss_pred             eecCCCCCcCCChhHHHhHHhhcc
Q psy13793         77 YQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      |.|++|++.|.+...|..|+..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998763

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.51  E-value=8.3e-05  Score=54.05  Aligned_cols=72  Identities=22%  Similarity=0.436  Sum_probs=17.1

Q ss_pred             CCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhh
Q psy13793        238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM  314 (337)
Q Consensus       238 C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~  314 (337)
                      |..|+..|.+...|..|+...++-..   . ....+.....+..+.+.-. ...+.|.+|++.|.+...|..|++..
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccc---c-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            66677777777777777654333211   0 1112223333333433211 22677777777777777777777544

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.47  E-value=7.4e-05  Score=54.33  Aligned_cols=23  Identities=35%  Similarity=0.836  Sum_probs=15.7

Q ss_pred             CccccccchhccCHHHHHHHHHh
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQ  285 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~  285 (337)
                      .+.|..|++.|.+...|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            56777777777777777777764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.45  E-value=7.5e-05  Score=40.02  Aligned_cols=21  Identities=33%  Similarity=0.768  Sum_probs=11.2

Q ss_pred             CeecCCCccccCCchHHHHHH
Q psy13793        291 PYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      ||+|..|++.|.+...|..|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCccCCccCChhHHHHHh
Confidence            355555555555555555553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.93  E-value=0.00012  Score=62.30  Aligned_cols=69  Identities=22%  Similarity=0.457  Sum_probs=41.8

Q ss_pred             CCcccccc--ccccccCHHHHHHHHHhcCCcc--ccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHH
Q psy13793        206 KGKHTCEI--CFRIFKTEINLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF  281 (337)
Q Consensus       206 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~  281 (337)
                      ++||+|++  |.+.+.....|+.|+.--+..+  ..-+          .-..|...-...|||+|++|++.|.....|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            36677765  7777777777777664332111  0000          01111111235699999999999999999998


Q ss_pred             HHH
Q psy13793        282 HLN  284 (337)
Q Consensus       282 H~~  284 (337)
                      |..
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            854

>smart00355 ZnF_C2H2 zinc finger

Probab=96.83  E-value=0.0011  Score=34.72  Aligned_cols=19  Identities=32%  Similarity=0.688  Sum_probs=9.7

Q ss_pred             ecCCCccccCCchHHHHHH
Q psy13793        293 KCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       293 ~C~~C~k~f~~~~~L~~H~  311 (337)
                      +|+.|++.|.....|..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        2 RCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCcchhCCHHHHHHHH
Confidence            4555555555555555553

>PRK04860 hypothetical protein; Provisional

Probab=96.82  E-value=0.00053  Score=54.05  Aligned_cols=40  Identities=28%  Similarity=0.608  Sum_probs=33.1

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCch
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSG  305 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~  305 (337)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            368998 887   6777889999999999999999998886543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.80  E-value=0.00091  Score=35.01  Aligned_cols=24  Identities=29%  Similarity=0.735  Sum_probs=21.9

Q ss_pred             eecCCCCCcCCChhHHHhHHhhcc
Q psy13793         77 YQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            679999999999999999998764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.71  E-value=0.0015  Score=39.67  Aligned_cols=28  Identities=25%  Similarity=0.650  Sum_probs=10.4

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      .|-.|++|+..+.+..+|.+|+..+++.
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            3444444444444444444444443333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.61  E-value=0.001  Score=34.73  Aligned_cols=23  Identities=35%  Similarity=0.803  Sum_probs=21.1

Q ss_pred             eecCCCCCcCCChhHHHhHHhhc
Q psy13793         77 YQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.50  E-value=0.0035  Score=38.13  Aligned_cols=32  Identities=38%  Similarity=0.638  Sum_probs=18.9

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCCCCc
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGK  208 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  208 (337)
                      ...|-.|++|+..+.+..+|++|+.++++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34566788888888888888888777666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.48  E-value=0.0021  Score=33.16  Aligned_cols=23  Identities=43%  Similarity=0.814  Sum_probs=13.2

Q ss_pred             eecCCCccccCCchHHHHHHHhhC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |+|+.|+.... ...|.+|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56666666665 666666665544

>KOG2231|consensus

Probab=96.36  E-value=0.011  Score=56.57  Aligned_cols=32  Identities=31%  Similarity=0.477  Sum_probs=22.6

Q ss_pred             eecCCCCCcCC---------------ChhHHHhHHhhccCccccCcc
Q psy13793         77 YQCAICPRGYY---------------SDIGLQNHLWSHRKILKNSNV  108 (337)
Q Consensus        77 ~~C~~C~~~F~---------------~~~~L~~H~~~H~~~~~c~~c  108 (337)
                      +.|.+|++.|.               +...|+.|+..-+..+.|..|
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~~~c~lC  146 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKLHLCSLC  146 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhhhccccc
Confidence            66777777773               788999999655555555555

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.20  E-value=0.0019  Score=34.42  Aligned_cols=22  Identities=27%  Similarity=0.626  Sum_probs=20.4

Q ss_pred             eecCCCCCcCCChhHHHhHHhh
Q psy13793         77 YQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      |.|..|++.|.+...|..|+..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.11  E-value=0.0032  Score=32.78  Aligned_cols=20  Identities=35%  Similarity=0.795  Sum_probs=9.6

Q ss_pred             cccccchhccCHHHHHHHHH
Q psy13793        265 NCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       265 ~C~~C~~~f~~~~~L~~H~~  284 (337)
                      .|.+|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444444

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.96  E-value=0.0048  Score=31.79  Aligned_cols=23  Identities=39%  Similarity=0.839  Sum_probs=14.0

Q ss_pred             ccccccchhccCHHHHHHHHHhcc
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      |.|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776666 667777776654

>PRK04860 hypothetical protein; Provisional

Probab=95.59  E-value=0.0068  Score=47.84  Aligned_cols=38  Identities=21%  Similarity=0.524  Sum_probs=33.1

Q ss_pred             cccccccccccCCHHHHHHHHHHcCCCCccccccccccccCH
Q psy13793        180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTE  221 (337)
Q Consensus       180 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  221 (337)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            59998 987   678889999999999999999999988653

>KOG1146|consensus

Probab=95.22  E-value=0.0068  Score=61.52  Aligned_cols=147  Identities=16%  Similarity=0.192  Sum_probs=91.8

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHHcC-------------------------CCCccccccccccccCHHHHHHH
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQAHK-------------------------PKGKHTCEICFRIFKTEINLTRH  227 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~l~~H  227 (337)
                      .+++-.+-|+|+.|++.|.....|..|++..+                         +.++|.|..|..+++...+|..|
T Consensus       458 ~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  458 VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             eeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHH
Confidence            34455578999999999999999999998733                         22457777777777777777777


Q ss_pred             HHhc--CCc---------------cc-cCCccCCCCC--CHHHHHHHHHHhCCC-CCccccccchhccCHHHHHHHHH-h
Q psy13793        228 LECH--DTV---------------EL-SCPDCNRVYP--TNSTLRAHMISHSTE-RPHNCPHCEKTFKRNQDLKFHLN-Q  285 (337)
Q Consensus       228 ~~~h--~~~---------------~~-~C~~C~~~f~--~~~~l~~H~~~h~~~-k~~~C~~C~~~f~~~~~L~~H~~-~  285 (337)
                      +..-  ...               +. .|..+...-.  ......     .... -.|.|.+|++.-+-...|..|+. .
T Consensus       538 lqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~-----~pktkP~~~C~vc~yetniarnlrihmtss  612 (1406)
T KOG1146|consen  538 LQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSS-----GPKTKPSWRCEVCSYETNIARNLRIHMTAS  612 (1406)
T ss_pred             HHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCC-----CCCCCCCcchhhhcchhhhhhccccccccC
Confidence            6532  000               00 0111110000  000000     0111 23889999999998899999987 5


Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCCc
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISL  325 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~  325 (337)
                      ++...|..|-.|+-.+.....|..+ .+.+.....+..+-
T Consensus       613 ~~s~~p~~~Lq~~it~~l~~~~~~~-~~lp~tps~~~~s~  651 (1406)
T KOG1146|consen  613 PSSSPPSLVLQQNITSSLASLLGGQ-GRLPFTPSSPPSSD  651 (1406)
T ss_pred             CCCCChHHHhhhcchhhccccccCc-CCCCCCCCCCcccc
Confidence            6666778888888888887777777 46774444444333

>KOG2231|consensus

Probab=94.92  E-value=0.039  Score=52.94  Aligned_cols=121  Identities=22%  Similarity=0.511  Sum_probs=77.0

Q ss_pred             ccccccccccC---------------CHHHHHHHHHHcCCCCccccccc---------cccccCHHHHHHHHHhcCC---
Q psy13793        181 YQCPLCNKKIN---------------TKSNLRRHLQAHKPKGKHTCEIC---------FRIFKTEINLTRHLECHDT---  233 (337)
Q Consensus       181 ~~C~~C~~~f~---------------~~~~l~~H~~~h~~~~~~~C~~C---------~~~f~~~~~l~~H~~~h~~---  233 (337)
                      +.|.+|+..|.               ....|+.|+..-+.  .+.|.+|         .....+...|..|+..-..   
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~  177 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDE  177 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccc
Confidence            56777776663               66788899854222  2344443         2233456777777765322   


Q ss_pred             --c-cccCCccCCCCCCHHHHHHHHHHhCCCCCccccccc------hhccCHHHHHHHHHhccCCCCeecC--CCc-ccc
Q psy13793        234 --V-ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCE------KTFKRNQDLKFHLNQHTGERPYKCP--FCP-RTF  301 (337)
Q Consensus       234 --~-~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~------~~f~~~~~L~~H~~~H~~~~~~~C~--~C~-k~f  301 (337)
                        + ...|..|...|.....|..|++.++    |.|..|.      .-|.....|..|.|.+|    |.|.  .|. +.|
T Consensus       178 s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f  249 (669)
T KOG2231|consen  178 SCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKF  249 (669)
T ss_pred             cccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----cccccccccccee
Confidence              1 2469999999999999999988765    6676664      46788889999988654    4565  454 334


Q ss_pred             CCchHHHHHH
Q psy13793        302 ASSGNCFSHR  311 (337)
Q Consensus       302 ~~~~~L~~H~  311 (337)
                      .....+..|+
T Consensus       250 ~~~~~~ei~l  259 (669)
T KOG2231|consen  250 YVAFELEIEL  259 (669)
T ss_pred             eehhHHHHHH
Confidence            3333344443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.84  E-value=0.042  Score=47.73  Aligned_cols=127  Identities=24%  Similarity=0.508  Sum_probs=89.7

Q ss_pred             cccccc--cccccCCHHHHHHHHHHcCCCCccccccccc---ccc------CHHHHHHHHHhcCCc-c----ccCCccCC
Q psy13793        180 RYQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCEICFR---IFK------TEINLTRHLECHDTV-E----LSCPDCNR  243 (337)
Q Consensus       180 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f~------~~~~l~~H~~~h~~~-~----~~C~~C~~  243 (337)
                      .|.|+.  |..+......|..|.+..++.  +.|.+|-.   .|.      +...|..|...-.+. .    ..|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            378875  777777788999999876653  67777642   333      345666666543322 2    36999999


Q ss_pred             CCCCHHHHHHHHHHhCCCCCccccccch-------hccCHHHHHHHHHhccCCCCeecCC--Cc----cccCCchHHHHH
Q psy13793        244 VYPTNSTLRAHMISHSTERPHNCPHCEK-------TFKRNQDLKFHLNQHTGERPYKCPF--CP----RTFASSGNCFSH  310 (337)
Q Consensus       244 ~f~~~~~l~~H~~~h~~~k~~~C~~C~~-------~f~~~~~L~~H~~~H~~~~~~~C~~--C~----k~f~~~~~L~~H  310 (337)
                      .|.+...|..|++..+    -.|-+|++       -|....+|..|.+.-    -|.|.+  |-    ..|.....|+.|
T Consensus       229 ~FYdDDEL~~HcR~~H----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~~el~~h  300 (493)
T COG5236         229 YFYDDDELRRHCRLRH----EACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYHTELLEH  300 (493)
T ss_pred             eecChHHHHHHHHhhh----hhhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccHHHHHHH
Confidence            9999999999988543    35777765       478888999998742    244543  32    468888899999


Q ss_pred             HHhhCC
Q psy13793        311 RKRMHE  316 (337)
Q Consensus       311 ~~~~H~  316 (337)
                      +-+.|.
T Consensus       301 ~~~~h~  306 (493)
T COG5236         301 LTRFHK  306 (493)
T ss_pred             HHHHhh
Confidence            988885

>KOG1146|consensus

Probab=94.78  E-value=0.0091  Score=60.63  Aligned_cols=57  Identities=21%  Similarity=0.447  Sum_probs=43.8

Q ss_pred             CCCCccccccchhccCHHHHHHHHHh--ccC-----------------------------------------CCCeecCC
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLNQ--HTG-----------------------------------------ERPYKCPF  296 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~~--H~~-----------------------------------------~~~~~C~~  296 (337)
                      +.+||.|..|..+++....|.+|+..  |-.                                         +-.+.|.+
T Consensus       515 ~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~v  594 (1406)
T KOG1146|consen  515 PGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEV  594 (1406)
T ss_pred             CCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhh
Confidence            34789999999999999999999873  411                                         11489999


Q ss_pred             CccccCCchHHHHHHHhhCC
Q psy13793        297 CPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       297 C~k~f~~~~~L~~H~~~~H~  316 (337)
                      |+..-+-..+|+.|+...|.
T Consensus       595 c~yetniarnlrihmtss~~  614 (1406)
T KOG1146|consen  595 CSYETNIARNLRIHMTASPS  614 (1406)
T ss_pred             hcchhhhhhccccccccCCC
Confidence            99998888888888765544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.68  E-value=0.0089  Score=31.80  Aligned_cols=21  Identities=33%  Similarity=0.756  Sum_probs=11.5

Q ss_pred             ccccccchhccCHHHHHHHHH
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.78  E-value=0.054  Score=30.63  Aligned_cols=23  Identities=22%  Similarity=0.640  Sum_probs=20.8

Q ss_pred             ceecCCCCCcCCChhHHHhHHhh
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      +|.|++|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            68999999999999999999853

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785|consensus

Probab=93.71  E-value=0.15  Score=45.28  Aligned_cols=133  Identities=21%  Similarity=0.407  Sum_probs=91.0

Q ss_pred             cccccccccccCCHHHHHHHHHH--cC-----------------------------------CCCccccccccccccCHH
Q psy13793        180 RYQCPLCNKKINTKSNLRRHLQA--HK-----------------------------------PKGKHTCEICFRIFKTEI  222 (337)
Q Consensus       180 ~~~C~~C~~~f~~~~~l~~H~~~--h~-----------------------------------~~~~~~C~~C~~~f~~~~  222 (337)
                      .|.|..|...|.+...-+.|.++  |.                                   ++.++.|..|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            38899999999999888888764  31                                   123488999999999998


Q ss_pred             HHHHHHHhcCC------------------cccc-------------CCccCCCCCCHHHHHHHHHHh------------C
Q psy13793        223 NLTRHLECHDT------------------VELS-------------CPDCNRVYPTNSTLRAHMISH------------S  259 (337)
Q Consensus       223 ~l~~H~~~h~~------------------~~~~-------------C~~C~~~f~~~~~l~~H~~~h------------~  259 (337)
                      +...|+.....                  ....             +..+-..+........+...-            .
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            88888754210                  0111             222322333222222221110            0


Q ss_pred             CCCCccccccchhccCHHHHHHHHHhccCC-----------------------CCeecCCCc---cccCCchHHHHHHH
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLNQHTGE-----------------------RPYKCPFCP---RTFASSGNCFSHRK  312 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~-----------------------~~~~C~~C~---k~f~~~~~L~~H~~  312 (337)
                      ..-|-.|-.|++.+.+...-..||-.++|-                       .-|.|-.|+   +.|.+-...+.||.
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            123567999999999999999999987762                       348899999   99999999999986

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.52  E-value=0.11  Score=45.13  Aligned_cols=34  Identities=21%  Similarity=0.293  Sum_probs=25.5

Q ss_pred             ceecCC--CCCcCCChhHHHhHHhhccCccccCccc
Q psy13793         76 PYQCAI--CPRGYYSDIGLQNHLWSHRKILKNSNVG  109 (337)
Q Consensus        76 ~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~c~~c~  109 (337)
                      .|.|+.  |.........|..|.+..++.+-|..|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~  186 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECI  186 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhh
Confidence            488864  7777777889999988777766666664

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.49  E-value=0.061  Score=27.96  Aligned_cols=20  Identities=30%  Similarity=0.579  Sum_probs=17.3

Q ss_pred             eecCCCCCcCCChhHHHhHHh
Q psy13793         77 YQCAICPRGYYSDIGLQNHLW   97 (337)
Q Consensus        77 ~~C~~C~~~F~~~~~L~~H~~   97 (337)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            5799999999 7888988974

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.67  E-value=0.1  Score=27.10  Aligned_cols=8  Identities=50%  Similarity=1.555  Sum_probs=3.3

Q ss_pred             ccccchhc
Q psy13793        266 CPHCEKTF  273 (337)
Q Consensus       266 C~~C~~~f  273 (337)
                      |+.||+.|
T Consensus         5 C~~CgR~F   12 (25)
T PF13913_consen    5 CPICGRKF   12 (25)
T ss_pred             CCCCCCEE
Confidence            44444444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.58  E-value=0.015  Score=54.09  Aligned_cols=55  Identities=27%  Similarity=0.535  Sum_probs=50.7

Q ss_pred             CcccccccccccCCHHHHHHHHH--HcCCC--Cccccc--cccccccCHHHHHHHHHhcCC
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQ--AHKPK--GKHTCE--ICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      .++.|..|...|.....|..|.+  .|.++  +++.|.  .|++.|.....+..|...|..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  348 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS  348 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccC
Confidence            46899999999999999999999  89999  999999  799999999999999988865

>KOG2893|consensus

Probab=92.06  E-value=0.038  Score=45.45  Aligned_cols=41  Identities=27%  Similarity=0.550  Sum_probs=26.2

Q ss_pred             CCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHH
Q psy13793        238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       238 C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H  282 (337)
                      |..|.+.|.+..-|.+|++.    |-|+|.+|.+.+.+--.|..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            66677777777777766553    337777777666555555555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.20  E-value=0.15  Score=28.70  Aligned_cols=22  Identities=27%  Similarity=0.560  Sum_probs=13.8

Q ss_pred             CccccccchhccCHHHHHHHHH
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      +|.|.+|+..|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.50  E-value=0.084  Score=49.01  Aligned_cols=57  Identities=21%  Similarity=0.348  Sum_probs=45.3

Q ss_pred             CcceeehhhhcccceeceeeEEeeecccCCCceecCC--CCCcCCChhHHHhHHhhccC
Q psy13793         45 GSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAI--CPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~h~~~h~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~  101 (337)
                      ......|..|...|........|.+.+++++++.|..  |...|.....+..|...+..
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (467)
T COG5048          30 APRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHN   88 (467)
T ss_pred             CCchhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhcccccc
Confidence            3345577778888888888888999999999999976  55778888888888877754

>KOG2482|consensus

Probab=90.27  E-value=0.49  Score=41.33  Aligned_cols=134  Identities=18%  Similarity=0.300  Sum_probs=80.7

Q ss_pred             Cccccccccccc-CCHHHHHHHHHH-cCC--CC-------------------ccccccccccccCHHHHHHHHHhcCCc-
Q psy13793        179 TRYQCPLCNKKI-NTKSNLRRHLQA-HKP--KG-------------------KHTCEICFRIFKTEINLTRHLECHDTV-  234 (337)
Q Consensus       179 ~~~~C~~C~~~f-~~~~~l~~H~~~-h~~--~~-------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~-  234 (337)
                      ....|-.|..-+ ..++.+..|+.. |.-  ..                   .+.|-.|.+.|..+..|+.||+...-+ 
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            346798998654 456777778743 421  11                   278999999999999999999764211 


Q ss_pred             --c--------cc--CCccCCCCCC-HHHHHHHHHHhC-------------CCCC--ccccccchhccCHHHHHHHHHh-
Q psy13793        235 --E--------LS--CPDCNRVYPT-NSTLRAHMISHS-------------TERP--HNCPHCEKTFKRNQDLKFHLNQ-  285 (337)
Q Consensus       235 --~--------~~--C~~C~~~f~~-~~~l~~H~~~h~-------------~~k~--~~C~~C~~~f~~~~~L~~H~~~-  285 (337)
                        |        |.  -..-|++... .+.+.+-.....             +..+  .+|-.|.........|..||.+ 
T Consensus       223 inPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~v  302 (423)
T KOG2482|consen  223 INPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIV  302 (423)
T ss_pred             cCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHH
Confidence              0        00  0111222211 111100000000             1122  4788899888889999999884 


Q ss_pred             ccC--------------------------CCCeecCCCccccCCchHHHHHHH
Q psy13793        286 HTG--------------------------ERPYKCPFCPRTFASSGNCFSHRK  312 (337)
Q Consensus       286 H~~--------------------------~~~~~C~~C~k~f~~~~~L~~H~~  312 (337)
                      |.-                          ...-.|-.|.-.|-....|..|+.
T Consensus       303 He~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  303 HEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            510                          123568888899999999999973

>KOG4173|consensus

Probab=90.11  E-value=0.12  Score=41.57  Aligned_cols=79  Identities=28%  Similarity=0.579  Sum_probs=57.3

Q ss_pred             cccccc--ccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHH-HhC---------CCCCccc--cccchhc
Q psy13793        208 KHTCEI--CFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMI-SHS---------TERPHNC--PHCEKTF  273 (337)
Q Consensus       208 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~k~~~C--~~C~~~f  273 (337)
                      .|.|.+  |...|........|...-++  -.|..|.+.|.+...|.-|+. +|.         |.-.|.|  +.|+..|
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            477876  66778777666677655443  368999999999988888875 342         4456888  4588889


Q ss_pred             cCHHHHHHHHH-hccC
Q psy13793        274 KRNQDLKFHLN-QHTG  288 (337)
Q Consensus       274 ~~~~~L~~H~~-~H~~  288 (337)
                      .+...-..|+- +|.-
T Consensus       157 kT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  157 KTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhHHHHhccC
Confidence            88888888874 6643

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.95  E-value=0.12  Score=28.87  Aligned_cols=9  Identities=44%  Similarity=1.423  Sum_probs=4.5

Q ss_pred             CCeecCCCc
Q psy13793        290 RPYKCPFCP  298 (337)
Q Consensus       290 ~~~~C~~C~  298 (337)
                      .+..|+.||
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            344555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2482|consensus

Probab=89.73  E-value=0.46  Score=41.49  Aligned_cols=106  Identities=20%  Similarity=0.368  Sum_probs=68.1

Q ss_pred             cccccccccccCCHHHHHHHHHH--cCCCCc--------ccc--ccccccccCH-HHHHHHHH-hc-------------C
Q psy13793        180 RYQCPLCNKKINTKSNLRRHLQA--HKPKGK--------HTC--EICFRIFKTE-INLTRHLE-CH-------------D  232 (337)
Q Consensus       180 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~--------~~C--~~C~~~f~~~-~~l~~H~~-~h-------------~  232 (337)
                      .+.|-+|.+.|.++..|+.||+.  |..-.|        |.-  ..-|++..-. +.+.+-.. .+             .
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            48899999999999999999975  432222        111  1233333221 11110000 00             1


Q ss_pred             Ccc--ccCCccCCCCCCHHHHHHHHHHhCC---------------------------CCCccccccchhccCHHHHHHHH
Q psy13793        233 TVE--LSCPDCNRVYPTNSTLRAHMISHST---------------------------ERPHNCPHCEKTFKRNQDLKFHL  283 (337)
Q Consensus       233 ~~~--~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~k~~~C~~C~~~f~~~~~L~~H~  283 (337)
                      ..+  ..|-.|....-+...|..||..-+.                           .+.-.|-.|.-.|-....|..|+
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            112  5788999888889999999976431                           02346889999999999999999


Q ss_pred             Hh
Q psy13793        284 NQ  285 (337)
Q Consensus       284 ~~  285 (337)
                      ..
T Consensus       355 ~e  356 (423)
T KOG2482|consen  355 VE  356 (423)
T ss_pred             cc
Confidence            74

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.65  E-value=0.41  Score=35.03  Aligned_cols=33  Identities=30%  Similarity=0.603  Sum_probs=23.4

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHH
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRH  227 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  227 (337)
                      |.|+.|+...-              +-|-.|..||-+..+...|.+.
T Consensus         2 Y~CPrC~skvC--------------~LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622         2 YFCPQCRAKVC--------------ELPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             ccCCCCCCCcc--------------CCCCcCCcCCCEEeccchHHHh
Confidence            67888765542              3467888888888877777764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.99  E-value=0.21  Score=31.03  Aligned_cols=28  Identities=32%  Similarity=0.644  Sum_probs=14.4

Q ss_pred             CCCCccccccchhccCHHHHHHHHHhcc
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      |+.-+.|+.|+..|....+..+|...-+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            3444555555555555555555554433

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.88  E-value=0.32  Score=29.23  Aligned_cols=28  Identities=29%  Similarity=0.565  Sum_probs=17.2

Q ss_pred             CCCCeecCCCccccCCc----hHHHHHHHhhC
Q psy13793        288 GERPYKCPFCPRTFASS----GNCFSHRKRMH  315 (337)
Q Consensus       288 ~~~~~~C~~C~k~f~~~----~~L~~H~~~~H  315 (337)
                      +....+|.+|++.+...    +.|.+|+++.|
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            45567788888877663    67888877766

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00614 ZnF_BED BED zinc finger

Probab=88.82  E-value=0.39  Score=29.72  Aligned_cols=27  Identities=30%  Similarity=0.605  Sum_probs=19.8

Q ss_pred             CeecCCCccccCCc-----hHHHHHHHhhCCC
Q psy13793        291 PYKCPFCPRTFASS-----GNCFSHRKRMHEG  317 (337)
Q Consensus       291 ~~~C~~C~k~f~~~-----~~L~~H~~~~H~~  317 (337)
                      .-.|.+|++.++..     ++|.+|++..|+.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~~   49 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHPA   49 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCcC
Confidence            35688888877665     5888888767764

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.71  E-value=0.35  Score=35.44  Aligned_cols=30  Identities=30%  Similarity=0.816  Sum_probs=24.2

Q ss_pred             ccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCc
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASS  304 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~  304 (337)
                      ..|+.||+.|.-           .+..|..|++||..|.-.
T Consensus        10 R~Cp~CG~kFYD-----------Lnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD-----------LNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc-----------CCCCCccCCCCCCccCcc
Confidence            579999988876           345788999999988766

The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.22  E-value=0.32  Score=30.23  Aligned_cols=30  Identities=27%  Similarity=0.605  Sum_probs=21.0

Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhC
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      -.|+..+.|+-||..|....+..+|+-..|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            356667777777777777777777766655

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=85.64  E-value=1.6  Score=32.08  Aligned_cols=24  Identities=29%  Similarity=0.635  Sum_probs=15.3

Q ss_pred             eec----CCCccccCCchHHHHHHHhhC
Q psy13793        292 YKC----PFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       292 ~~C----~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |.|    ..|+..+.+...+.+|.+..|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            666    666666666666666665544

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=85.33  E-value=1.1  Score=32.82  Aligned_cols=92  Identities=17%  Similarity=0.387  Sum_probs=59.9

Q ss_pred             cccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCc------------cccccchhccCH
Q psy13793        209 HTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPH------------NCPHCEKTFKRN  276 (337)
Q Consensus       209 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~------------~C~~C~~~f~~~  276 (337)
                      |.|..|+...-             ..|..|++||-.......|.+-.----..++|            .|-.|...|...
T Consensus         2 Y~CPrC~skvC-------------~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~   68 (112)
T TIGR00622         2 YFCPQCRAKVC-------------ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKP   68 (112)
T ss_pred             ccCCCCCCCcc-------------CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCc
Confidence            66777764332             35678999999988887777632111112222            389999988764


Q ss_pred             HHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        277 QDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       277 ~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      ....  ...-.....|+|+.|...|-..-++..| ...|.
T Consensus        69 ~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiH-e~Lh~  105 (112)
T TIGR00622        69 PVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVH-ESLHC  105 (112)
T ss_pred             cccc--ccccccccceeCCCCCCccccccchhhh-hhccC
Confidence            3111  0001234579999999999998888889 57774

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=85.12  E-value=0.3  Score=40.31  Aligned_cols=50  Identities=24%  Similarity=0.541  Sum_probs=40.2

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      ||| |=.|++.|.....|+.|++.    +-|+|.+|.|..-+--.|..|-..+|.
T Consensus        10 kpw-cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhh
Confidence            454 88899999999999999874    469999999877666677777666763

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.60  E-value=1.6  Score=32.04  Aligned_cols=51  Identities=22%  Similarity=0.504  Sum_probs=40.4

Q ss_pred             cccCCccCCCCCCHHHHHHHHHH-hCCC-----------------------------------------CCccc----cc
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMIS-HSTE-----------------------------------------RPHNC----PH  268 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-----------------------------------------k~~~C----~~  268 (337)
                      ...|..|+.+..- +.+..|++. |...                                         .-|.|    ..
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~~   89 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPPH   89 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCCC
Confidence            3579999988776 889999884 4311                                         12889    99


Q ss_pred             cchhccCHHHHHHHHHhc
Q psy13793        269 CEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       269 C~~~f~~~~~L~~H~~~H  286 (337)
                      |++.+.+...+.+|++.+
T Consensus        90 C~y~~~~~~~m~~H~~~~  107 (109)
T PF12013_consen   90 CGYITRSKKTMRKHWRKE  107 (109)
T ss_pred             CCcEeccHHHHHHHHHHh
Confidence            999999999999999865

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=82.53  E-value=0.87  Score=36.84  Aligned_cols=78  Identities=22%  Similarity=0.497  Sum_probs=57.2

Q ss_pred             Ccccccc--cccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcC----------C-ccccC--CccCC
Q psy13793        179 TRYQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHD----------T-VELSC--PDCNR  243 (337)
Q Consensus       179 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------~-~~~~C--~~C~~  243 (337)
                      ..+.|+.  |...|.....+..|...-++.   .|..|.+.|.+...|..|+..-+          + .-|.|  ..|+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            3478876  778888888888887554443   79999999999888888875432          1 23677  56888


Q ss_pred             CCCCHHHHHHHHH-HhC
Q psy13793        244 VYPTNSTLRAHMI-SHS  259 (337)
Q Consensus       244 ~f~~~~~l~~H~~-~h~  259 (337)
                      .|.....-..|+. .|.
T Consensus       155 KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhHHHHhcc
Confidence            8888888888874 454

>KOG2186|consensus

Probab=81.55  E-value=0.91  Score=38.03  Aligned_cols=50  Identities=16%  Similarity=0.602  Sum_probs=38.7

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      |.|..||..... ..+.+|+...++ ..|.|-.||.+|.. .....|...-++
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcch
Confidence            789999988664 456669988777 67899999999987 667778765544

>PF12907 zf-met2: Zinc-binding

Probab=81.00  E-value=0.37  Score=28.17  Aligned_cols=29  Identities=24%  Similarity=0.463  Sum_probs=18.3

Q ss_pred             eecCCCccccCC---chHHHHHHHhhCCCCCC
Q psy13793        292 YKCPFCPRTFAS---SGNCFSHRKRMHEGETL  320 (337)
Q Consensus       292 ~~C~~C~k~f~~---~~~L~~H~~~~H~~~~~  320 (337)
                      ++|.+|-..|..   ...|..|....|+...+
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~   33 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTF   33 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCH
Confidence            567777755543   35577777777776544

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=80.92  E-value=0.65  Score=26.13  Aligned_cols=9  Identities=56%  Similarity=1.387  Sum_probs=4.8

Q ss_pred             CeecCCCcc
Q psy13793        291 PYKCPFCPR  299 (337)
Q Consensus       291 ~~~C~~C~k  299 (337)
                      |-.|++||-
T Consensus        18 p~~CP~Cg~   26 (34)
T cd00729          18 PEKCPICGA   26 (34)
T ss_pred             CCcCcCCCC
Confidence            445555553

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	337
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-21
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-13
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-11
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		8e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		7e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		3e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 169 SYNNAMFSSGTR-YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRH 227
           S   A    G + Y CP C K  +   +L  H + H  +  + C  C + F  + +LTRH
Sbjct: 9   SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH 68
Query: 228 LECHDTVE-LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH 286
              H   +   CP+C + +   + LRAH  +H+ E+P+ CP C K+F +   L+ H   H
Sbjct: 69  QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128
Query: 287 TGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           TGE+PYKCP C ++F+   N  +H +R H GE
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTH-QRTHTGE 159

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           CP+C + +  +S L+ H  +H+ E+P+ CP C K+F ++ DL+ H   HTGE+PYKCP C
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPEC 66
Query: 298 PRTFASSGNCFSHRKRMHE 316
            ++F+ S +  S  +R H+
Sbjct: 67  GKSFSRSDH-LSRHQRTHQ 84

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              C  C + +  +STL  H++ HS  RP+ C +C K F +  D+K H   HTGE+P+KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 295 PFCPRTFASSGNCFSHRKRMHEG 317
             C + F+ S N  +H  R H G
Sbjct: 61  QVCGKAFSQSSNLITH-SRKHTG 82

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 214 CFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEK 271
           C ++F+    + +HL  H      C +C + +  +S L+ H + H+ E+P  C    C K
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72
Query: 272 TFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSGNCFSH 310
            F  + +L+ H+  HTG+RPY CPF  C + FA S N  SH
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 239 PDCNRVYPTNSTLRAHMISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPF 296
           P C +VY  +S L+AH+ +H+ E+P+ C    C+  F R+ +L  H  +HTG +P++C  
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV 80
Query: 297 CPRTFASSGNCFSHRKR 313
           C R+F+ S +   H KR
Sbjct: 81  CNRSFSRSDHLALHMKR 97

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 176 SSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE 235
           S  +  +CP C+KK  +K  L+ H + H  +    C  C + +  + NL  H        
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-------- 54
Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
                            A    + +E+   C  C++TF+R  +L+ H+  HTGE PYKC 
Sbjct: 55  ----------------EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCS 98
Query: 296 FCPRTFASSGNCFSHRKRMHEG 317
            C + F    +  SH  ++H G
Sbjct: 99  SCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE--RPYK 293
           ++C  C +++     L  H +SHS E+P++CP C   FKR   + +H+  H G   +PY 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 294 CPFCPRTFASSGNCFSHRKRMHEGET 319
           C  C + F+   +   H K++H G +
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 241 CNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPFCP 298
           C + Y  +S L+AH+ +H+ E+P++C    C   F R+ +L  H  +HTG RP++C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 299 RTFASSGNCFSHRKR 313
           R F+ S +   H KR
Sbjct: 73  RAFSRSDHLALHMKR 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 241 CNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPFCP 298
           C + Y  +S L+AH+ +H+ E+P++C    C   F R+ +L  H  +HTG RP++C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 299 RTFASSGNCFSHRKR 313
           R F+ S +   H KR
Sbjct: 74  RAFSRSDHLALHMKR 88

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCP 295
           CP   + +     L  H+  H+ E+P  CP   C K F R+++LK H   HTGE+P+KC 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 296 F--CPRTFASSGNCFSHRKRMH 315
           F  C R FA+S +    +K MH
Sbjct: 125 FEGCDRRFANSSD---RKKHMH 143

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  +S L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  + +L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  ++ L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  ++ L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 243 RVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF--CP 298
           R +     L  HM  H+ E+PH C    C K++ R ++LK HL  HTGE+PY C    C 
Sbjct: 47  RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 106
Query: 299 RTFASSGNCFSHRKRMHEGE 318
           + F+++ +   H+ R H  E
Sbjct: 107 KAFSNASDRAKHQNRTHSNE 126

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  +  L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  +  L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 5   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 64
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 65  DICGRKFARS 74

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +  +  L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 295 PFCPRTFASS 304
             C R FA S
Sbjct: 66  DICGRKFARS 75

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +   + L  H+  H+ ++P  C  C + F +   L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFAC 65
Query: 295 PFCPRTFAS 303
             C R FA+
Sbjct: 66  DICGRKFAT 74

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK 293
           V   C  C R Y   ++LR H   HS E+ + C +CEK F   +    H   HTGER Y+
Sbjct: 21  VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ 80
Query: 294 CPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEM 328
           C  C ++F +     SH K +H  +   D  L  +
Sbjct: 81  CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRL 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 27/129 (20%)
Query: 184 PLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNR 243
           P CNK+    S+L+ H + H  +  + C+                           DC R
Sbjct: 12  PGCNKRYFKLSHLQMHSRKHTGEKPYQCDF-------------------------KDCER 46
Query: 244 VYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC--PFCPRTF 301
            +  +  L+ H   H+  +P  C  C++ F R+  LK H   HTGE+P+ C  P C + F
Sbjct: 47  RFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF 106
Query: 302 ASSGNCFSH 310
           A S     H
Sbjct: 107 ARSDELVRH 115

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 237 SCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +CP   C+R +   + L  H+  H+ ++P  C  C + F ++  L  H+  HTGE+P+ C
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFAC 65
Query: 295 PFCPRTFAS 303
             C R FA+
Sbjct: 66  DICGRKFAT 74

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           E  C  C R +  +  L  H  +H+ ERP+ C  C K F+R   L+ H   H+ E+P+KC
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 295 PFCPRTFASSGNCFSHRKRMHEGETLPDIS 324
             C + F  S     H K +H   + P  +
Sbjct: 77  QECGKGFCQSRTLAVH-KTLHMQTSSPTAA 105

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           C  C + +     L+ HM  H+  +P+ C  C+     +  L  HL  H+ ERP+KC  C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 298 PRTFASSGNCFSHRKRMHEGETLP 321
           P    +S     H  R H G++ P
Sbjct: 71  PYASRNSSQLTVHL-RSHTGDSGP 93

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP 321
           +P  C  C + F R+  L  H+  HTGE+P+ C  C R FA S     HR   H    L 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILE 61
Query: 322 DISLDEMSDN 331
           D   + +S N
Sbjct: 62  DKVEELLSKN 71

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH 315
           E+P+ C  C K F R+  L  H   HTGE+PYKC  C + F+ +    +H +R+H
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIH 65

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR 299
            C + +   S    HM  H   RP+ C  C K FK    L  H+  HTG +PY+C  C +
Sbjct: 14  QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73
Query: 300 TF 301
            F
Sbjct: 74  RF 75

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 266 CPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE 316
           C +C K F+ N  L  HL  HTGE+PYKC FC    A   +   H +R H+
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           ++P+ C  C+ +F+   +L  H   HTGE+PY+C  C   F    N  +H  R+H GE
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGE 71

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 262 RPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSH 310
           RP+ CP   C++ F R+ +L  H+  HTG++P++C  C R F+ S +  +H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEG 317
           R + C  C K+F  + DL  H   HTGE+PYKC  C + F    +   H  R+H G
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTG 71

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKC 294
           S  DC   Y  N  L+AH+  H+ E+P  C    CEK F     L  H   HTGE+ + C
Sbjct: 7   SFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 66
Query: 295 --PFCPRTFASSGNCFSHRKRMH 315
               C   F +  N   H  R H
Sbjct: 67  DSDGCDLRFTTKANMKKHFNRFH 89

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSG 305
           +S +R+H+ SH        P C KT+ ++  LK H   HTGE+P+ C +  C R FA S 
Sbjct: 12  SSRIRSHICSH--------PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 306 NCFSHRK 312
               HR+
Sbjct: 64  ELSRHRR 70

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 266 CPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEG 317
           C  C + F R + LK H   HT E+PY C  C R F        H +++H G
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	337
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-11
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	3e-04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	8e-04

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 92.0 bits (229), Expect = 7e-23
 Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 17/148 (11%)

Query: 186 CNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVE---------- 235
                             + +     + C R F T   L  H+     V           
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCY 61

Query: 236 -LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPY 292
              CP   + +     L  H+  H+ E+P  CP   C K F R+++LK H   HTGE+P+
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 293 KCPF--CPRTFASSGNCFSHRKRMHEGE 318
           KC F  C R FA+S +   H   +H  +
Sbjct: 122 KCEFEGCDRRFANSSDRKKH-MHVHTSD 148

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 76.2 bits (188), Expect = 5e-17
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHT------CEICFRIFKTEINLTRHLECH 231
                C++  +T   L  H+       P+  +       C    + FK +  L  H+  H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 232 DTVE--LSC--PDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQ 285
            T E    C  P C +++  +  L+ H  +H+ E+P  C    C++ F  + D K H++ 
Sbjct: 86  -TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

Query: 286 HTGERPYKC 294
           HT ++    
Sbjct: 145 HTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.9 bits (138), Expect = 4e-10
 Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 10/88 (11%)

Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK------ 293
                        +       +       C++TF    +L  H+       P +      
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 294 ---CPFCPRTFASSGNCFSHRKRMHEGE 318
              CP   ++F +     +H  R+H GE
Sbjct: 62  WEECPREGKSFKAKYKLVNH-IRVHTGE 88

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 89.2 bits (222), Expect = 8e-22
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 29/145 (20%)

Query: 181 YQCPLCNKKINTKSNLRRHLQA---HKPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
            +   C+++ +++  L  H+ +   H  + +  C                          
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG----------------------G 41

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCP 295
           C    R +     L  HM  H+ E+PH C    C K++ R ++LK HL  HTGE+PY C 
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101

Query: 296 F--CPRTFASSGNCFSHRKRMHEGE 318
              C + F+++ +   H+ R H  E
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNE 126

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 9/66 (13%)

Query: 261 ERPHNCPHCEKTFKRNQDLKFHLNQ---HTGERPYKCPFC-----PRTFASSGNCFSHRK 312
           E       C + F   + L  H+N    H   + + C +       R F +      H  
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-M 59

Query: 313 RMHEGE 318
           R H GE
Sbjct: 60  RRHTGE 65

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 16/118 (13%)

Query: 183 CPLCNKKINTKSNLRRHLQAH---KPKGKHTCEI--CFRIFKTEINLTRHLECHDTVE-- 235
           C    +    +  L  H++ H   KP   H C    C + +    NL  HL  H T E  
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKP---HKCTFEGCRKSYSRLENLKTHLRSH-TGEKP 97

Query: 236 LSC--PDCNRVYPTNSTLRAHMI-SHSTERPHNC--PHCEKTFKRNQDLKFHLNQHTG 288
             C    C++ +   S    H   +HS E+P+ C  P C K +     L+ H+    G
Sbjct: 98  YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 88.7 bits (221), Expect = 3e-21
 Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 10/143 (6%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE-- 235
           Y+CP C K  + K +L RH + H   KP   + C  C + F    NL  H   H T E  
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKP---YKCPECGKSFSQRANLRAHQRTH-TGEKP 105

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
            +CP+C + +   + LRAH  +H+ E+P+ CP C K+F R  +L  H   HTGE+PYKCP
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165

Query: 296 FCPRTFASSGNCFSHRKRMHEGE 318
            C ++F+       H +R H G+
Sbjct: 166 ECGKSFSRRDALNVH-QRTHTGK 187

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 88.3 bits (220), Expect = 4e-21
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE-- 235
           Y CP C K  +   +L  H + H   KP   + C  C + F  + +LTRH   H T E  
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKP---YKCPECGKSFSDKKDLTRHQRTH-TGEKP 77

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
             CP+C + +   + LRAH  +H+ E+P+ CP C K+F +   L+ H   HTGE+PYKCP
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

Query: 296 FCPRTFASSGNCFSHRKRMHEGE 318
            C ++F+   N  +H +R H GE
Sbjct: 138 ECGKSFSREDNLHTH-QRTHTGE 159

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 69.0 bits (170), Expect = 3e-14
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNC 307
           +S+  A       E+P+ CP C K+F R+  L  H   HTGE+PYKCP C ++F+   + 
Sbjct: 6   SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 308 FSHRKRMHEGE 318
             H +R H GE
Sbjct: 66  TRH-QRTHTGE 75

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.8 bits (159), Expect = 1e-12
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE-- 235
           Y+CP C K  + ++NLR H + H   KP   + C  C + F    +L  H   H T E  
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKP---YACPECGKSFSQLAHLRAHQRTH-TGEKP 133

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERP 291
             CP+C + +     L  H  +H+ E+P+ CP C K+F R   L  H   HTG++ 
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 4e-06
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 272 TFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           +   +           GE+PY CP C ++F+ S +   H +R H GE
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGE 47

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 82.7 bits (205), Expect = 6e-20
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQHTGERPYKC 294
             P C +VY  +S L+AH+ +H+ E+P+ C    C+  F R+ +L  H  +HTG +P++C
Sbjct: 19  DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC 78

Query: 295 PFCPRTFASSGNCFSHRKR 313
             C R+F+ S +   H KR
Sbjct: 79  GVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 208 KHTCEI--CFRIFKTEINLTRHLECHDTVE--LSC--PDCNRVYPTNSTLRAHMISHSTE 261
            H C+   C +++    +L  HL  H T E    C    C+  +  +  L  H   H+  
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTH-TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHT 287
           +P  C  C ++F R+  L  H+ +H 
Sbjct: 74  KPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 81.0 bits (201), Expect = 2e-19
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQHTGERPYKC 294
               C + Y  +S L+AH+ +H+ E+P++C    C   F R+ +L  H  +HTG RP++C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 295 PFCPRTFASSGNCFSHRKR 313
             C R F+ S +   H KR
Sbjct: 69  QKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC--PFCPRTFASSGNCFSHRKRMH 315
            +     +   C KT+ ++  LK HL  HTGE+PY C    C   FA S     H  R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH-YRKH 60

Query: 316 EGE 318
            G 
Sbjct: 61  TGH 63

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 31/110 (28%)

Query: 180 RYQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVEL 236
                 C K     S+L+ HL+ H   KP   + C                         
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKP---YHC------------------------- 38

Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH 286
               C   +  +  L  H   H+  RP  C  C++ F R+  L  H+ +H
Sbjct: 39  DWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.4 bits (189), Expect = 5e-18
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 250 TLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE--RPYKCPFCPRTFASSGNC 307
           +  +   +HS E+P+ C  C   F ++  +K H+ Q   E    + CP C    A   + 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 308 FSHRKRMHEGE 318
             H ++ H   
Sbjct: 62  GVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.9 bits (154), Expect = 4e-13
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 223 NLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTE--RPHNCPHCEKTFKRNQD 278
           +       H + E    C  C+  +  + T++ H++   TE     +CPHC+    R  D
Sbjct: 2   SSGSSGRTH-SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 279 LKFHL-NQHTGERPY 292
           L  HL  QH+   P 
Sbjct: 61  LGVHLRKQHSYSGPS 75

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.2 bits (191), Expect = 1e-17
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 30/141 (21%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
            +CP C+KK  +K  L+ H + H   KP     C  C + +  + NL  H          
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKP---FECPKCGKCYFRKENLLEHE--------- 55

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
                           + + + +E+   C  C++TF+R  +L+ H+  HTGE PYKC  C
Sbjct: 56  --------------ARNCM-NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC 100

Query: 298 PRTFASSGNCFSHRKRMHEGE 318
            + F    +  SH  ++H G 
Sbjct: 101 SQQFMQKKDLQSHMIKLHSGP 121

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.8 bits (190), Expect = 1e-17
 Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 36/142 (25%)

Query: 181 YQC--PLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE 235
           + C  P CNK+    S+L+ H + H   KP   + C+                       
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKP---YQCD----------------------- 40

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
               DC R +  +  L+ H   H+  +P  C  C++ F R+  LK H   HTGE+P+ C 
Sbjct: 41  --FKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR 98

Query: 296 F--CPRTFASSGNCFSHRKRMH 315
           +  C + FA S     H   MH
Sbjct: 99  WPSCQKKFARSDELVRH-HNMH 119

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 73.7 bits (182), Expect = 7e-17
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR 299
            C+R +  + +L  H+  H+ ++P  C  C + F R+  L  H+  HTGE+P+ C  C R
Sbjct: 11  SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 300 TFASSGNCFSHRKRMHEGE 318
            FA S     H  ++H  +
Sbjct: 71  KFARSDERKRH-TKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 35/115 (30%)

Query: 181 YQCPL--CNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE 235
           Y CP+  C+++ +   +L RH++ H   KP     C IC R F                 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKP---FQCRICMRNFS---------------- 45

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
                       +  L  H+ +H+ E+P  C  C + F R+ + K H   H  ++
Sbjct: 46  -----------RSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.1 bits (183), Expect = 1e-16
 Identities = 41/146 (28%), Positives = 58/146 (39%), Gaps = 39/146 (26%)

Query: 181 YQCPL--CNKKINTKSNLRRHLQAH--KPKGKHTCEICFRIFKTEINLTRHLECHDTVEL 236
             CP   C K     S +R+HL  H  +    H C                         
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRV---HVCA------------------------ 38

Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKC 294
              +C + +  +S L+ H + H+ E+P  C    C K F  + +L+ H+  HTG+RPY C
Sbjct: 39  ---ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95

Query: 295 PF--CPRTFASSGNCFSHRKRMHEGE 318
           PF  C + FA S N  SH    H   
Sbjct: 96  PFDGCNKKFAQSTNLKSH-ILTHAKA 120

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 73.3 bits (181), Expect = 1e-16
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE--RPYKCP 295
           C  C +++     L  H +SHS E+P++CP C   FKR   + +H+  H G   +PY C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69

Query: 296 FCPRTFASSGNCFSHRKRMHEGE 318
            C + F+   +   H K++H G 
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGP 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.8 bits (146), Expect = 8e-12
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEG 317
            S      C  C K F+    L  H   H+GE+PY CP C   F        H  R H+G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDG 60

Query: 318 ET 319
             
Sbjct: 61  SV 62

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 26/116 (22%), Positives = 37/116 (31%), Gaps = 36/116 (31%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
             C +C K      +L RH  +H   KP            +                   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKP------------YS------------------ 37

Query: 238 CPDCNRVYPTNSTLRAHMISHSTE--RPHNCPHCEKTFKRNQDLKFHLNQ-HTGER 290
           CP C   +     +  H+ SH     +P+ C  C K F R   L  H+ Q H+G  
Sbjct: 38  CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 32/161 (19%)

Query: 180 RYQC--PLCNKKINTKSNLRRHLQAH---KPKGKHTCE--ICFRIFKTEINLTRHL---- 228
           RY C    C    N    L+ HL  H   KP     C+   C + F +  +LTRH     
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKP---FPCKEEGCEKGFTSLHHLTRHSLTHT 68

Query: 229 -----ECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPH----NCPHCEKTFKRNQDL 279
                 C          C+  + T + ++ H       +      +  +C K FK++  L
Sbjct: 69  GEKNFTCDS------DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 280 KFHLNQHTGERPYKC--PFCPRTFASSGNCFSHRKRMHEGE 318
           K H   HT + PY+C    C + F+       H +++H G 
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGY 162

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 71.9 bits (177), Expect = 4e-15
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 181 YQC--PLCNKKINTKSNLRRHLQAH---KPKGKHTCE--ICFRIFKTEINLTRHLECHDT 233
           + C    C K   +  +L RH   H   K     TC+   C   F T+ N+ +H      
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTGEKN---FTCDSDGCDLRFTTKANMKKHFNRF-H 98

Query: 234 VELSCP------DCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQ 285
               C       +C + +  ++ L+ H  SH+ + P+ CPH  C+K F     LK H   
Sbjct: 99  NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV 158

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHE 316
           H G    K   C     +      H    H+
Sbjct: 159 HAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 253 AHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQHTGERPYKC--PFCPRTFASSGNCF 308
                    + + C    C   + +N  L+ HL +HTGE+P+ C    C + F S  +  
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 309 SHRKRMHEGE 318
            H    H GE
Sbjct: 62  RH-SLTHTGE 70

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 237 SCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKC 294
              +C + +  ++ L+ H  SH+ + P+ CPH  C+K F     LK H   H G    K 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 295 PFCPRTFASSGNCFSHRKRMH 315
             C     +      H    H
Sbjct: 65  DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 265 NCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGE 318
           +  +C K FK++  LK H   HT + PY+CP   C + F+       H +++H G 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGY 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 72.1 bits (178), Expect = 3e-16
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           C  C + +     L+ HM  H+  +P+ C  C+     +  L  HL  H+ ERP+KC  C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 298 PRTFASSGNCFSHRKRMHEGE 318
           P    +S     H  R H G+
Sbjct: 71  PYASRNSSQLTVH-LRSHTGD 90

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.1 bits (160), Expect = 9e-14
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 207 GKHT------CEICFRIFKTEINLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISH 258
           G         CE+C + F  +  L  H+ CH T      C  C+     +S+L  H+  H
Sbjct: 1   GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCH-TGVKPYKCKTCDYAAADSSSLNKHLRIH 59

Query: 259 STERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           S ERP  C  C    + +  L  HL  HTG+     
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.0 bits (157), Expect = 3e-13
 Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE 316
           S  +  PH C  C K F R   LK H+  HTG +PYKC  C    A S +   H  R+H 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHS 60

Query: 317 GE 318
            E
Sbjct: 61  DE 62

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.2 bits (173), Expect = 2e-15
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)

Query: 223 NLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLK 280
             +         +    C  C R +  +  L  H  +H+ ERP+ C  C K F+R   L+
Sbjct: 4   GSSGGRLPS-KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 281 FHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            H   H+ E+P+KC  C + F  S     H K +H   
Sbjct: 63  DHRYIHSKEKPFKCQECGKGFCQSRTLAVH-KTLHMQT 99

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.5 bits (166), Expect = 2e-14
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 249 STLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCF 308
           S      +   T++   C  C + F ++ +L  H   HT ERPY C  C + F    +  
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 309 SHRKRMHEGE 318
            H + +H  E
Sbjct: 63  DH-RYIHSKE 71

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 66.3 bits (163), Expect = 5e-14
 Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 9/107 (8%)

Query: 193 KSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE--LSCPDCNRVYPT 247
            S            K      C+ C R F    NL  H   H T E   +C  C++ +  
Sbjct: 2   SSGSSGGRLPSKTKKE---FICKFCGRHFTKSYNLLIHERTH-TDERPYTCDICHKAFRR 57

Query: 248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              LR H   HS E+P  C  C K F +++ L  H   H        
Sbjct: 58  QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.1 bits (165), Expect = 8e-15
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET 319
           R   C  C + F R + LK H   HT E+PY C  C R F        H +++H G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ-HTGE 289
           C  C R +     L+ H  SH+ E+P+ C  C + F R   L  H  + H+G 
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 67.6 bits (166), Expect = 9e-15
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 237 SCPDCNRVYPTNSTLRAHM-ISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYK 293
             P C R++     L  H    H  ++  +CP   C K+F   + LK H+  H+  R Y 
Sbjct: 11  DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70

Query: 294 CPFCPRTF 301
           C F   + 
Sbjct: 71  CEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 6/66 (9%)

Query: 258 HSTERPHNCPH--CEKTFKRNQDLKFHL-NQHTGERPYKCPF--CPRTFASSGNCFSHRK 312
            S      C    C + F   Q L  H   QH  ++ + CP   C ++F    +   H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-M 60

Query: 313 RMHEGE 318
           ++H   
Sbjct: 61  KLHSDT 66

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.4 bits (166), Expect = 1e-14
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           C  C + +  +STL  H++ HS  RP+ C +C K F +  D+K H   HTGE+P+KC  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 298 PRTFASSGNCFSHRKRMHEG 317
            + F+ S N  +H  R H G
Sbjct: 64  GKAFSQSSNLITH-SRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 33/111 (29%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
           + C +C K     S L  HL  H   +P            +                   
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRP------------YP------------------ 31

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG 288
           C  C + +   S ++ H   H+ E+PH C  C K F ++ +L  H  +HTG
Sbjct: 32  CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.9 bits (162), Expect = 3e-14
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 249 STLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCF 308
                H     +++P+ C  C+ +F+   +L  H   HTGE+PY+C  C   F    N  
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 309 SHRKRMHEGE 318
           +H  R+H GE
Sbjct: 63  TH-TRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
           C  C   +     L +H   H+ E+P+ C  C   F R  +LK H   H+GE+PY
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNC 307
           + +           R + C  C K+F  + DL  H   HTGE+PYKC  C + F    + 
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 308 FSHRKRMHEGE 318
             H  R+H G 
Sbjct: 63  IGH-HRVHTGS 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 223 NLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLK 280
           +  R             C +C + +  +S L  H  +H+ E+P+ C  C K F +   L 
Sbjct: 5   SSGRSEWQQ-RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 281 FHLNQHTGERPYK 293
            H   HTG  P  
Sbjct: 64  GHHRVHTGSGPSS 76

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.0 bits (162), Expect = 4e-14
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           C  C R +  +  L  H+ +H+ E+P  C  C + F R+ + K H +      P      
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKV 64

Query: 298 PRTFASSGNCFSHRK--RMHEGE 318
               + + +  +     +   GE
Sbjct: 65  EELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH 315
           +P  C  C + F R+  L  H+  HTGE+P+ C  C R FA S     HR  + 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.4 bits (132), Expect = 6e-10
 Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 37/116 (31%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
           +QC +C +  +   +L  H++ H   KP     C+IC R F                   
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKP---FACDICGRKFA------------------ 42

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ---HTGER 290
                     +   + H        P      E+   +N  L+  + +     GER
Sbjct: 43  ---------RSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 4/67 (5%)

Query: 249 STLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGN 306
           + L  +++     RP+ CP   C++ F R+ +L  H+  HTG++P++C  C R F+ S +
Sbjct: 7   NNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64

Query: 307 CFSHRKR 313
             +H + 
Sbjct: 65  LTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 239 PDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHT 287
             C+R +  +  L  H+  H+ ++P  C  C + F R+  L  H+  HT
Sbjct: 25  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNC 307
            S    HM  H   RP+ C  C K FK    L  H+  HTG +PY+C  C + F    + 
Sbjct: 22  KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81

Query: 308 FSHRKRMHEGE 318
             HR  +    
Sbjct: 82  --HR-HVTSCT 89

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 61.7 bits (151), Expect = 2e-12
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 6/98 (6%)

Query: 211 CEICFRIFKTEINLTRHLECHDTVE--LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH 268
           C+ C + F  +    RH+  H        C  C + +     L  HM  H+  +P+ C  
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMH-LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 269 CEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGN 306
           C K F        H +  +  + Y+     +    +  
Sbjct: 71  CAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 55.5 bits (135), Expect = 5e-10
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE 316
             S ++ + C  C K+F        H++ H G RPY C  C + F    +   H  ++H 
Sbjct: 4   GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHT 61

Query: 317 GE 318
           G 
Sbjct: 62  GI 63

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 12/104 (11%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVE-- 235
           Y C  C K    KS   RH+  H   +P   + C +C + FK + +L  H++ H T    
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRP---YGCGVCGKKFKMKHHLVGHMKIH-TGIKP 65

Query: 236 LSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDL 279
             C  C + +    +   H+   S  + +     E+        
Sbjct: 66  YECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 249 STLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKC--PFCPRTFASS 304
           S      I  S  R H C H  C KT+ ++  LK H   HTGE+P+ C    C R FA S
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 305 GNCFSHRKRMH 315
                HR R H
Sbjct: 63  DELSRHR-RTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 239 PDCNRVYPTNSTLRAHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQH 286
           P C + Y  +S L+AH  +H+ E+P +C    CE+ F R+ +L  H   H
Sbjct: 23  PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 250 TLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE----RPYKCPFCPRTFASSG 305
           +  +   +H+ E+P+ C HC+KTF++ Q L  H  ++         + C  C +TF    
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 306 NCFSHRKRMHEGE 318
               H      G 
Sbjct: 62  TMARH-ADNCAGP 73

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.5 bits (140), Expect = 4e-11
 Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTE----RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK 293
           C  C++ +     L  H   +           C  C KTF R   +  H +   G    +
Sbjct: 18  CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77

Query: 294 CPFCPRTF 301
                 + 
Sbjct: 78  GENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 279 LKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPD 322
                  HTGE+PY C  C +TF        H  + +       
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVP 45

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 23/93 (24%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPD 240
           Y C  C+K    K  L  H + +     +     F                      C  
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRY--HDPNFVPAAFV---------------------CSK 52

Query: 241 CNRVYPTNSTLRAHMISHSTERPHNCPHCEKTF 273
           C + +   +T+  H  + +        +   + 
Sbjct: 53  CGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHL--NQHTGERPYKCPFCPRTFASSGNCFSHRKRMH 315
              E  + C  C + +    +   H   +     + Y CPFC + F    N  +H K +H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 316 E 316
           +
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 238 CPDCNRVYPTNSTLRAHM--ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG 288
           C  C+RVY   S    H         + + CP C K F R  ++  H+     
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAHKPKGK--HTCEICFRIFKTEINLTRHLECH 231
           Y+C +C++     SN  RH      +    + C  CF+ F  + N+T H++  
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 1e-12
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHT---GERPYKCPFCPRTFASSGNCFSHRKRM 314
            S      C  C  T ++   L +H  +H        + C FC + F    +  +HR + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 315 HEGETLP 321
           H    L 
Sbjct: 62  HPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.6 bits (124), Expect = 5e-09
 Identities = 11/66 (16%), Positives = 19/66 (28%), Gaps = 3/66 (4%)

Query: 236 LSCPDCNRVYPTNSTLRAHMISHST---ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
           L C  C       ++L  H   H+         C  C K F++   +  H ++       
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 293 KCPFCP 298
                 
Sbjct: 68  APQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAHKPKGKH---TCEICFRIFKTEINLTRHLECHDTVELS 237
            QC +C      K++L  H + H          CE C + F+   ++  H        L 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 238 CP 239
            P
Sbjct: 68  AP 69

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQ-HTGERPYKCPFCPRTFAS 303
           S S  +P+ C  C K F R   L  H+ Q HT ERP+KC       +S
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +  +PY C  C + F+   +   H K++H  E
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 39

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 251 LRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSH 310
                  HS E+P+ C  C K F R+  L  H   HTGE+PYKC  C + F+ +    +H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 311 RKRMHEGE 318
            +R+H   
Sbjct: 62  -QRIHTSG 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.5 bits (122), Expect = 8e-09
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
           C +C + +  +S L  H   H+ E+P+ C  C K F +N  L  H   HT     
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE 316
           S S+  P  C  C  +      L+ H   H  +RP+KC +C        N   H  +   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKFH 61

Query: 317 GE 318
           G+
Sbjct: 62  GD 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP 295
           C +C+    + + LR H   H T+RP  C +C    K+  +L  H+ +  G+      
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELS 237
            +C  C+   ++K+ LR H + H   +P     C  C    K   NL++H++     ++S
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRP---FKCNYCSFDTKQPSNLSKHMKKF-HGDMS 65

Query: 238 CPDC 241
            P  
Sbjct: 66  GPSS 69

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 59.9 bits (144), Expect = 2e-11
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 191 NTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNST 250
           +  S  +++L  HK    H   +     K    LT   +      +     N      S+
Sbjct: 5   DVDSGSKKYLSNHKGIFIH---VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESS 61

Query: 251 LRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSH 310
               +++        CP C   F  +  LK H+     E    CP C + F S+ +   H
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119

Query: 311 RKRMHEG 317
             + H  
Sbjct: 120 VCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 161 KITASNLLSYNNAMFSSGTRYQC----PLCNKKINTKSNLRRHLQAHKPKGKHTCEICFR 216
            +T   L  Y+          +      + N ++  +S+    L A K   +  C +C  
Sbjct: 23  HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLM 82

Query: 217 IFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHM 255
            F + ++L +H+         CP C + + +  +   H+
Sbjct: 83  PFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHV 120

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.0 bits (87), Expect = 9e-04
 Identities = 11/61 (18%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVEL 236
           + +++ CPLC    ++  +L++H++  +      C +C + F +  +   H+     + +
Sbjct: 71  AISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNICV 128

Query: 237 S 237
           S
Sbjct: 129 S 129

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.5 bits (129), Expect = 4e-10
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 253 AHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  P C   F R+ +L  H   H+G +P   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 282 HLNQHTGERPYKC--PFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P+ C  P C   F+ S     HR R H G 
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGV 40

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +   P+ C  CEK+F     L  H   HT E+P   
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   G  PYKC  C ++F+       H+ RMH  E
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTRE 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/40 (37%), Positives = 18/40 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
               S   E+P+ C  C   F+  Q LK HL  HTG  P 
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
                 GE+PY C  C   F       SH  R+H G 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSH-LRIHTGS 37

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S ERP+ C  C K F R+  L  HL +H  E+    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GERPY C  C + F    +   H  + H  E
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRHFRE 38

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.5 bits (125), Expect = 5e-09
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 194 SNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNST--- 250
           S+ + +        K  C+ C   + T + LT H+           + +   P   +   
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 251 ---LRAHMISHSTERPHNCPHCEKTFKRNQDLKFHL--NQHTGERPYK 293
              L         ++   C +C  +F+  QDL  H+   +H  +    
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 6/91 (6%)

Query: 236 LSCPDCNRVYPTNSTLRAHMIS-----HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
             C DC+  Y T   L  HM              N      +  R + L     +   ++
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 291 PYKCPFCPRTFASSGNCFSH-RKRMHEGETL 320
             KC +C  +F S  +   H  K  H  +  
Sbjct: 80  VLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 2/78 (2%)

Query: 247 TNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGN 306
           + S+ + +    +      C  C   +    +L  H+   TG                  
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNN-PKRW 60

Query: 307 CFSHRKRMHEGETLPDIS 324
               ++ + E E   D  
Sbjct: 61  SKPRKRSLLEMEGKEDAQ 78

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S   E+   C  C+  F +   L+ H N H GE+P   
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   GE+ +KC  C   F+ + +   H + +H GE
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVHVGE 38

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P+ C  C K + R  +L  H   H GE+    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  + E+PYKC  C + +    N   H +R+H GE
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVHMGE 38

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P+ C  C K +KR  DL FH   HTGE+    
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PYKC  C + +    +   H+ R+H GE
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTGE 38

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 51.1 bits (121), Expect = 1e-08
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 3/98 (3%)

Query: 223 NLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH 282
             +      +     C  CN    +     +H           CP+C   F   +  + H
Sbjct: 4   GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH 61

Query: 283 LNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETL 320
                  +   C  C RTF SS + + H+  +H    +
Sbjct: 62  -ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM 98

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 47.6 bits (112), Expect = 3e-07
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 179 TRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSC 238
             YQC LCN K+++      H +  +      C  C   F +      H    +  +L+C
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKKLTC 72

Query: 239 PDCNRVYPTNSTLRAHMIS 257
            +C R + ++ ++  H + 
Sbjct: 73  LECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 7e-06
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 204 KPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERP 263
           + K  + C +C     + +    H          CP C+  + +    + H  S    + 
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE-SKCEYKK 69

Query: 264 HNCPHCEKTFKRNQDLKFH 282
             C  C +TFK +  +  H
Sbjct: 70  LTCLECMRTFKSSFSIWRH 88

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K+F +   L  H   HTGE P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C ++F        H+ R+H GE
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGE 38

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +  +P+ C  C KTF     L  H   HTG +P   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG +PY C  C +TF+       H+ R H G 
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGV 38

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K+F     L+ H   HTGER    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C ++F        H ++ H GE
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCHTGE 38

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S ERP  C  C K F R   L  HL  H+ E+    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GERP+KC  C + F    +   H  R+H  E
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSRE 38

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S ++P+ C  C KTF +   L  H   HTGER    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +G++PY+C  C +TF   G+   H KR+H GE
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVHTGE 38

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + ER + C  C K F R   L  H   HTGE+P   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGER Y+C  C + FA       H+ R+H GE
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGE 38

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K+F +   L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C ++F        H +++H GE
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIHTGE 38

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.6 bits (118), Expect = 3e-08
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 9/67 (13%)

Query: 237 SCPDCNRVYPTNSTLRAHM----ISHSTERPH-----NCPHCEKTFKRNQDLKFHLNQHT 287
               C+R + T   L  H+    +    +  H      CP   K+FK    L  H+  HT
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 288 GERPYKC 294
           GE+    
Sbjct: 87  GEKSGPS 93

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F R   L  H   HTGER    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F        H ++ H GE
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSHTGE 38

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P  C  C K F++N  L  HL  HTGE+P   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +GE+P+KC  C + F  + +  SH  R+H GE
Sbjct: 7   GSGEKPFKCKECGKAFRQNIHLASH-LRIHTGE 38

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F     L  H+  H+GE+P   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   GE+PY C  C + F+S      H  R H GE
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTHSGE 38

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
             S E+P  C  CEK F     L  H   H  E+P   
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +GE+P+ C  C + F+S      H ++ H  E
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVH-QQTHAEE 36

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + ++P  C HC K+F+   +L  H   HTGE+    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG++P++C  C ++F + GN  +H+ R+H GE
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGE 38

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E P  C  C K F    +L  H   HTGERP   
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE P+ C  C + F    N   H+ ++H GE
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGE 38

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+ +NC  C K+F R   L  H   H+GE+P   
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+ Y C  C ++F+ +     H +R+H GE
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLHSGE 38

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  C   F  +  L  HL  H    P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P++C  C   F+ S + F H  R HE  
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSHERT 38

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K +    +L  H   HTGERP   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + + S  N   H +++H GE
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVHTGE 38

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F    +L  H   HT ++P   
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY C  C + F    N   H+ ++H  +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQ 38

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + +RP+ C  C K FK    L  H   HTGE+P   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG+RPY+C  C + F +  +   HR R H GE
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGE 38

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + ++   C  C+KTF ++  L  H   HTGE+P   
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   G++ +KC  C +TF  S +   H+ R+H GE
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGE 38

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S E+P  C  C K F +N  L  H   HTGE+P   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+P++C  C + F  + +  SH+ R+H GE
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGE 38

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K+F+    L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C ++F    +   H +R+H GE
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIHTGE 38

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.6 bits (113), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC 297
           S  T +   C  C K F+    L  H   H+GE+PY     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F   +DL  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F    + ++H   +H GE
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVHTGE 38

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  C K F     L  H   H  ++    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P KC  C + F        H +R H  +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTHVDD 38

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E P+ C  C K F R   L  H   H GE+P   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE PY+C  C + F+      SH+ R H GE
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGE 38

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  C K F R   L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P+KC  C + F+       H  ++H GE
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGE 38

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+PH C  C K+F  N  L  H   HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P++C  C ++F+ +     H +R+H GE
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIHTGE 38

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S E+P  C  C K F +N  L  H   HTGE+P   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+P+KC  C + F  +    SH +R+H GE
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVHTGE 38

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F+ + +L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F +  N  +H + +H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIHTGE 38

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + ER + C  C K F +   L  H   H GE+P   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGER Y+C  C + F        H +R+H GE
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMH-QRIHRGE 38

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S   E+P+ C  C K+F  +  L  H   HT E+P   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   GE+PY+C  C ++F+ S     H    H  E
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITHTRE 38

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S E+P+ C  C K F R+  L  H   HTG RP   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PYKC  C + F    +   H +R+H G 
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIHTGY 38

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F   Q L  H   H+G++P   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F+   +   H +R+H G+
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIHSGK 38

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P  C  C K+F  +  L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P++C  C ++F+ S    +H +R+H GE
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATH-QRIHTGE 38

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P++C  C K F  +  L  HL  HT E     
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY C  C + F  S +   H  R+H  E
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVHTQE 38

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  C+K F    +L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P++C  C + F +  N   H+ R H GE
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGE 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
              S   E+P+ C  C   F +   L+ H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
                 GE+PYKC  C   F    +  +H   +H G 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIHTGS 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P+ C  C K F +N  L  H   HTGE+P   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PYKC  C + F  + +  +H  R+H GE
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIHTGE 38

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 7e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P  C  C K F  N     H   H+GE+P   
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+P+KC  C + F ++  C+SH+ R H GE
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGE 38

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + ERP+ C  C K F    +L  H   HTGE+P   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGERPY C  C + F    N   H+ ++H GE
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGE 38

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+NC  C K F  +  L+ H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY C  C + F        H +R+H GE
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIHTGE 38

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P+ C  C KTF +   L  H   HTGE+P   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PY C  C +TF+      +H +R H GE
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTHTGE 38

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+ + C  C K F RN  L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+ YKC  C + F+ +     H +++H GE
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIHTGE 38

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S E+P+ C +C K F  + +L  H   HTGE+P   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PY C +C + F  S     H +R+H GE
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIHTGE 38

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F+RN  L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +   H + +H GE
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIHTGE 38

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S   E+ + C  C K F ++  L+ H   HTGE+P   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   GE+ YKC  C + F+ S +  +H +R+H GE
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVHTGE 38

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+NC  C K+F+    L  H   H+GE+P   
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY C  C ++F  +     H +R+H GE
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVHSGE 38

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +  +P+ C  C K F+    L  H   HTGE     
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG +PY C  C + F S      H  R H GE
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTHTGE 38

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C+K F    +L  H   HTGE     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F +  N   H +R H GE
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTHTGE 38

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F+ N  L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  +     H +R+H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIHTGE 38

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P  C  C K++ +   L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P+KC  C +++    +   H +R+H GE
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVHTGE 38

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 13/38 (34%), Positives = 14/38 (36%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
             S E P+ C  C K F R   L  H   H GE     
Sbjct: 4   GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +GE PY+C  C + F       SH+ R H GE
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQ-RTHAGE 36

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 9e-08
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + ++P+ C  C K F +N  L  H   HTGE+P   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            TG++PYKC  C + F  + +   H + +H GE
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARH-RGIHTGE 38

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F    +L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F    N F+H +++H GE
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIHTGE 38

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +N  L  H   HTG +P   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +   HR R+H G 
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTGG 38

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +N  L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +   H + +H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIHTGE 38

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + ERPH C  C K+F ++  L  H   HTGE+P   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGERP+KC  C ++F  S +   H+ R+H GE
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGE 38

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P  C  C K+F     L  H   HT E+P   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P+KC  C ++F        H   +H  E
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVHTAE 38

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +N  L  H   HTG +P   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +  +H +R+H G 
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIHTGV 38

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F  N     H   HTG+RP   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +C  H +R+H G+
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLHTGQ 38

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +  +   C  C K F R   L  H   HTGE+P   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG + ++C  C + F        H +++H GE
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIHTGE 38

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E P+ C  C K F R   L  H   H+G+     
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE PY+C  C + F+      SH+ + H G+
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQ 38

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +   L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F    +   H ++ H GE
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTHTGE 38

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K+F +   L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY C  C ++F    +   H +R+H GE
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIHTGE 38

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S+ + H C  C + F     L  H   HTGE+P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +  + ++C  C R F    +   H +R+H GE
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIHTGE 38

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 2e-07
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +N  L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  + +   H + +H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIHTGE 38

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F  +  L  H   H+GE+P   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F+   +   H +R+H GE
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVHSGE 38

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F +   L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F+ + +   H+ R+H GE
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGE 38

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F +   L  H   HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F+ +     H +R+H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIHTGE 38

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F+ +  L  H + H+GERP   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F  S +   H   +H GE
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVHSGE 38

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P+ C  C K F +  +L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + FA   N   H +R+H GE
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIHTGE 38

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +  +P+ C  C K F +   L  H   HTGE+P   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG +PY+C  C + F+ +     H +R+H GE
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVHTGE 38

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S +  +P+ C  C K F     L  H   HTGE+P   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG +PY C  C + F+   +  +H + +H GE
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIHTGE 38

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F+    L  H   H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PYKC  C + F +  +   H +  H GE
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIH-QATHSGE 38

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S + E+P+ C  C K F     L  H   HTG++P   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+PY+C  C + F+   +  +H + +H G+
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIHTGK 38

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S + E+P +C  C K F  +  L  H   HTGE+P   
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TGE+P+ C  C + F+       H +R+H GE
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHTGE 38

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S   ER H C  C K F +  +   H   HTGE+P   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +   GER ++C  C + F  + N   HR R+H GE
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGE 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
               S   E+P+ C  C K F +   L  H+  HTG  P 
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
                 GE+PY+C  C + F+  G+   H  R+H G 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVHTGS 37

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ-HTGERPYKCP 295
           +   S + ++P+ C  C K F +N  L  H    HTGE+P    
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  TG++PY+C  C + F  + +   H +  H GE
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE 39

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S S E+ H C  C K F     L+ H   H GE+    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+ + C  C + F        H +R+H GE
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVHMGE 38

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
           +   S S E+P+ C  C K F     L  H   H G      
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             +  +GE+PY+C  C + F        H +R H G 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTHAGV 38

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 238 CPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
           C +C       S L+ H+ +H+  RP++C +C  +FK   +L  H+      +
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 266 CPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           C  C    K+   LK H+  HT  RPY C +C  +F + GN   H  +     
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH-MKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 5e-05
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 180 RYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECH 231
           +Y C  C  +    S L++H++ H     + C  C   FKT+ NLT+H++  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 10/37 (27%), Positives = 14/37 (37%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK 293
           S   E P+ C  C K+F +   L  H    +   P  
Sbjct: 5   SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
             GE PY C  C ++F   G+   H +R     
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVH-QRSCSQS 37

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
             S E+P++C  C++TF  N  L  H   HT +     
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP 321
            +GE+PY C  C  TF+ +     H+ +MH  ++ P
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGP 39

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 41.6 bits (98), Expect = 7e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKR 313
                TG +P++CP C R+F+ S +   HRKR
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH 286
                +  +P  CP C+++F R+  L  H  +H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY 292
             S +R + C  C K+F++   L  H   HTG  P 
Sbjct: 4   GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +G+R Y+C  C ++F   G+   H +R+H G 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLH-ERIHTGS 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC 294
              S +  + +NC  C K F R   L  H   HT +     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPD 322
            T  + Y C  C + F    +   H +++H  ++ P 
Sbjct: 7   GTDSKSYNCNECGKAFTRIFHLTRH-QKIHTRKSGPS 42

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 7e-05
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERP 291
           +   S + E P  C  C++ F +   L  H   H  +  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP 321
             +   GE P+KC  C R F        H  R H  ++ P
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGP 41

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
           R   C  C + F R + LK H   HT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 13/75 (17%), Positives = 21/75 (28%), Gaps = 4/75 (5%)

Query: 249 STLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGER---PYKCPFCPRTFASS 304
                +  +   E  + C +C           FH++ +H        Y C  C       
Sbjct: 4   HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63

Query: 305 GNCFSHRKRMHEGET 319
                H  + H GE 
Sbjct: 64  DALSEHNLKYHPGEE 78

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 256 ISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGER 290
           +    ++ H C    C K + +   L+ HL  HTGER
Sbjct: 1   MDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 8/73 (10%)

Query: 247 TNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGN 306
           ++ +       H  +R   C  C   F R        +  +  +   C  C +       
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRR-------STLSRRKTPMCEKCRKDSCQEAA 54

Query: 307 CFSHRKRMHEGET 319
                +    G+ 
Sbjct: 55  LNKD-EGNESGKK 66

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 98

 Score = 38.4 bits (88), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 227 HLECHDTVELSCPDCNRV-YPTNSTLRAHM-ISHSTERPHNCPHCEKTFKRNQDLKFHLN 284
               H+  E  CP CN V   T   L+ HM +    +    C HC K FK    L +H  
Sbjct: 16  QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75

Query: 285 QHTGERP 291
                +P
Sbjct: 76  AEHSAKP 82

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 96

 Score = 37.2 bits (85), Expect = 8e-04
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 227 HLECHDTVELSCPDCNRV-YPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ 285
           +LE  D   +SCP C  V   T   L+ HM +   E    C HC K  +    +K+H+  
Sbjct: 26  YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQE-MFTCHHCGKQLRSLAGMKYHVMA 84

Query: 286 HTGERP 291
           +    P
Sbjct: 85  NHNSLP 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	337
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.72
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.67
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.66
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.65
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.53
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.53
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.36
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.35
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.3
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.28
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.27
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.26
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.26
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.23
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.01
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.9
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.88
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.87
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.87
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.86
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.86
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.84
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.72
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.72
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.72
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.7
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.62
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.53
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.48
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.43
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.41
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.4
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.31
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.3
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.27
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.26
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.26
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.25
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.24
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.21
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.21
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.18
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.18
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.17
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.16
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.46
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.15
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.43
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.14
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.32
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.27
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.92
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.77
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.62
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.44
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.83
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.61
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.47
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.32
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.86
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.26
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.96
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.62
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.81
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.45
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	85.97
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.88
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	85.38
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	85.15
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	83.26
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.64
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	81.19

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4e-39  Score=265.41  Aligned_cols=182  Identities=32%  Similarity=0.698  Sum_probs=145.0

Q ss_pred             eeeEEeeecccCCCceecCCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccccccccccccCCCCCCcc
Q psy13793         62 KKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEM  141 (337)
Q Consensus        62 ~~~~~h~~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  141 (337)
                      ..+..|++.+.++++|.|++|++.|.+...|..|++.|.+                                        
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------------------------------------   46 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTG----------------------------------------   46 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC------------------------------------------
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCC----------------------------------------
Confidence            3456688889999999999999999999999999877632                                        


Q ss_pred             CCCCCcccCccccccccccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCH
Q psy13793        142 ETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTE  221 (337)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  221 (337)
                                                          .++|.|+.|++.|.+...|..|++.|+++++|.|..|++.|.+.
T Consensus        47 ------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   90 (190)
T 2i13_A           47 ------------------------------------EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR   90 (190)
T ss_dssp             -------------------------------------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             ------------------------------------CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCH
Confidence                                                35699999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccc
Q psy13793        222 INLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRT  300 (337)
Q Consensus       222 ~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~  300 (337)
                      ..|..|++.|.+ .+|.|++|++.|.....|..|++.|++++||.|.+|++.|.+...|..|+++|+++++|.|++|++.
T Consensus        91 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  170 (190)
T 2i13_A           91 ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKS  170 (190)
T ss_dssp             HHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             HHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCc
Confidence            999999999865 7899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCchHHHHHHHhhCCCCCC
Q psy13793        301 FASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       301 f~~~~~L~~H~~~~H~~~~~  320 (337)
                      |.+...|..|+ ++|+|+++
T Consensus       171 f~~~~~L~~H~-~~H~~~k~  189 (190)
T 2i13_A          171 FSRRDALNVHQ-RTHTGKKT  189 (190)
T ss_dssp             ESSHHHHHHHH-TTC-----
T ss_pred             cCCHHHHHHHH-HhcCCCCC
Confidence            99999999995 89999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.1e-35  Score=240.79  Aligned_cols=172  Identities=28%  Similarity=0.600  Sum_probs=143.8

Q ss_pred             CcceeehhhhcccceeceeeEEeeecccCCCceecCCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccc
Q psy13793         45 GSIVVKSLEHLKDLKVTKKKTVYDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDG  124 (337)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~h~~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~  124 (337)
                      ++..+.|..|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++.|.+                       
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------   74 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-----------------------   74 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC-----------------------
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC-----------------------
Confidence            345688999999999999999999999999999999999999999999999988743                       


Q ss_pred             cccccccccCCCCCCccCCCCCcccCccccccccccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcC
Q psy13793        125 EKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHK  204 (337)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  204 (337)
                                                                           +++|.|+.|++.|.+...|..|++.|+
T Consensus        75 -----------------------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~  101 (190)
T 2i13_A           75 -----------------------------------------------------EKPYKCPECGKSFSQRANLRAHQRTHT  101 (190)
T ss_dssp             -----------------------------------------------------CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             -----------------------------------------------------CCCccCcccCCccCCHHHHHHHHHhcC
Confidence                                                                 356999999999999999999999999


Q ss_pred             CCCccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHH
Q psy13793        205 PKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHL  283 (337)
Q Consensus       205 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~  283 (337)
                      ++++|.|..|++.|.+...|..|++.|.+ ++|.|++|++.|.....|..|++.|++++||.|++|++.|.+...|..|+
T Consensus       102 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          102 GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             TCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHH
Confidence            99999999999999999999999999865 78999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCCe
Q psy13793        284 NQHTGERPY  292 (337)
Q Consensus       284 ~~H~~~~~~  292 (337)
                      ++|+|++||
T Consensus       182 ~~H~~~k~~  190 (190)
T 2i13_A          182 RTHTGKKTS  190 (190)
T ss_dssp             TTC------
T ss_pred             HhcCCCCCC
Confidence            999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=2e-32  Score=225.28  Aligned_cols=168  Identities=29%  Similarity=0.554  Sum_probs=151.7

Q ss_pred             ccCCCceec--CCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcc
Q psy13793         71 KNGPKPYQC--AICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKK  148 (337)
Q Consensus        71 h~~~~~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (337)
                      ..+.++|.|  +.|++.|.+...|..|+++|.+                                               
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-----------------------------------------------   39 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG-----------------------------------------------   39 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC-----------------------------------------------
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCC-----------------------------------------------
Confidence            346789999  6899999999999999988743                                               


Q ss_pred             cCccccccccccccCccccccccccccCCCCcccc--cccccccCCHHHHHHHHHHcCCCCccccc--cccccccCHHHH
Q psy13793        149 IGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQC--PLCNKKINTKSNLRRHLQAHKPKGKHTCE--ICFRIFKTEINL  224 (337)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l  224 (337)
                                                   +++|.|  +.|++.|.+...|..|+++|+++++|.|.  .|++.|.+...|
T Consensus        40 -----------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           40 -----------------------------EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             -----------------------------CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             -----------------------------CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence                                         356899  88999999999999999999999999999  899999999999


Q ss_pred             HHHH-HhcC--CccccC--CccCCCCCCHHHHHHHHHHhCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecCC-
Q psy13793        225 TRHL-ECHD--TVELSC--PDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF-  296 (337)
Q Consensus       225 ~~H~-~~h~--~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~-  296 (337)
                      ..|+ +.|.  ..+|.|  +.|++.|.....|..|++.|++++||.|++  |++.|.+.+.|..|+++|++   |.|.. 
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~  167 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKD  167 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCST
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCC
Confidence            9999 5563  367999  899999999999999999999999999988  99999999999999999998   99999 


Q ss_pred             --CccccCCchHHHHHHHhhCCCC
Q psy13793        297 --CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       297 --C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                        |++.|.+...|..|+ ++|.++
T Consensus       168 ~~C~~~f~~~~~l~~H~-~~h~~e  190 (190)
T 1tf6_A          168 DSCSFVGKTWTLYLKHV-AECHQD  190 (190)
T ss_dssp             TTCCCCCSCHHHHHHHH-TTCC--
T ss_pred             CcCCCccccHHHHHHHH-HhhcCC
Confidence              999999999999996 778764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=2e-29  Score=207.29  Aligned_cols=165  Identities=22%  Similarity=0.385  Sum_probs=149.4

Q ss_pred             cceeeh--hhhcccceeceeeEEeeecccCCCceec--CCCCCcCCChhHHHhHHhhccCccccCcccceeeeccccccc
Q psy13793         46 SIVVKS--LEHLKDLKVTKKKTVYDRRKNGPKPYQC--AICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLRER  121 (337)
Q Consensus        46 ~~~~~~--~~~~~~~~~~~~~~~h~~~h~~~~~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~  121 (337)
                      ...+.|  ..|++.|.....|..|+++|.++++|.|  +.|++.|.+...|..|+++|.+                    
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------   69 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG--------------------   69 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT--------------------
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC--------------------
Confidence            344677  6899999999999999999999999999  8899999999999999977743                    


Q ss_pred             ccccccccccccCCCCCCccCCCCCcccCccccccccccccCccccccccccccCCCCccccc--ccccccCCHHHHHHH
Q psy13793        122 EDGEKRKHWIDENGGGENEMETPTPKKIGIREKVNWKKTKITASNLLSYNNAMFSSGTRYQCP--LCNKKINTKSNLRRH  199 (337)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H  199 (337)
                                                                              +++|.|+  .|++.|.+...|..|
T Consensus        70 --------------------------------------------------------~~~~~C~~~~C~~~f~~~~~l~~H   93 (190)
T 1tf6_A           70 --------------------------------------------------------EKNFTCDSDGCDLRFTTKANMKKH   93 (190)
T ss_dssp             --------------------------------------------------------CCCEECCSSSCCCEESCHHHHHHH
T ss_pred             --------------------------------------------------------CCceeCCCCCCCCccCCHHHHHHH
Confidence                                                                    3569999  899999999999999


Q ss_pred             H-HHc-CCCCcccc--ccccccccCHHHHHHHHHhcCC-ccccCCc--cCCCCCCHHHHHHHHHHhCCCCCccccc---c
Q psy13793        200 L-QAH-KPKGKHTC--EICFRIFKTEINLTRHLECHDT-VELSCPD--CNRVYPTNSTLRAHMISHSTERPHNCPH---C  269 (337)
Q Consensus       200 ~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~---C  269 (337)
                      + +.| .+.++|.|  ..||+.|.+...|..|+++|.+ ++|.|+.  |++.|.....|..|+++|++   |.|..   |
T Consensus        94 ~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C  170 (190)
T 1tf6_A           94 FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSC  170 (190)
T ss_dssp             HHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTC
T ss_pred             HHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcC
Confidence            9 566 46789999  8999999999999999999986 6899988  99999999999999999988   99999   9


Q ss_pred             chhccCHHHHHHHHHhccCC
Q psy13793        270 EKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       270 ~~~f~~~~~L~~H~~~H~~~  289 (337)
                      ++.|.+...|..|+++|+++
T Consensus       171 ~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          171 SFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCCSCHHHHHHHHTTCC--
T ss_pred             CCccccHHHHHHHHHhhcCC
Confidence            99999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.4e-27  Score=189.72  Aligned_cols=138  Identities=26%  Similarity=0.580  Sum_probs=127.3

Q ss_pred             CcccccccccccCCHHHHHHHHH---HcCCCCccccccc-----cccccCHHHHHHHHHhcCC-ccccCCc--cCCCCCC
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQ---AHKPKGKHTCEIC-----FRIFKTEINLTRHLECHDT-VELSCPD--CNRVYPT  247 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~  247 (337)
                      .+|.|+.|++.|.+...|..|++   +|.++++|.|..|     ++.|.+...|..|++.|.+ .+|.|++  |++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            35899999999999999999998   6888999998753     4999999999999999876 7899985  9999999


Q ss_pred             HHHHHHHHHHhCCCCCccccc--cchhccCHHHHHHHH-HhccCCCCeecCC--CccccCCchHHHHHHHhhCCC
Q psy13793        248 NSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHL-NQHTGERPYKCPF--CPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       248 ~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      ...|..|++.|++++||.|++  |++.|.+.+.|..|+ ++|+++++|.|++  |++.|.+.+.|..|+ +.|.|
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~hhg  155 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV-KTVHG  155 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHH-HHSCC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHH-HhhcC
Confidence            999999999999999999998  999999999999999 7999999999998  999999999999997 55543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.8e-26  Score=183.25  Aligned_cols=142  Identities=22%  Similarity=0.445  Sum_probs=125.7

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcccCccc
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGIRE  153 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (337)
                      +.+|.|+.|++.|.+...|..|++.++                                                     
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h-----------------------------------------------------   27 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEH-----------------------------------------------------   27 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHT-----------------------------------------------------
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhc-----------------------------------------------------
Confidence            357999999999999999999987421                                                     


Q ss_pred             cccccccccCccccccccccccCCCCccccc-----ccccccCCHHHHHHHHHHcCCCCcccccc--ccccccCHHHHHH
Q psy13793        154 KVNWKKTKITASNLLSYNNAMFSSGTRYQCP-----LCNKKINTKSNLRRHLQAHKPKGKHTCEI--CFRIFKTEINLTR  226 (337)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~-----~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  226 (337)
                                          +|.+.++|.|+     .|++.|.....|..|++.|++++||.|..  |++.|.+...|..
T Consensus        28 --------------------~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   87 (155)
T 2gli_A           28 --------------------IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT   87 (155)
T ss_dssp             --------------------SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHH
T ss_pred             --------------------cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHH
Confidence                                11223445555     45699999999999999999999999985  9999999999999


Q ss_pred             HHHhcCC-ccccCCc--cCCCCCCHHHHHHHH-HHhCCCCCccccc--cchhccCHHHHHHHHHhccC
Q psy13793        227 HLECHDT-VELSCPD--CNRVYPTNSTLRAHM-ISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       227 H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~  288 (337)
                      |++.|.+ ++|.|++  |++.|.....|..|+ +.|.+++||.|.+  |++.|.+.+.|..|+++|+|
T Consensus        88 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           88 HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999976 7899998  999999999999998 8999999999998  99999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=7.7e-26  Score=172.53  Aligned_cols=119  Identities=30%  Similarity=0.624  Sum_probs=92.6

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHH
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMI  256 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  256 (337)
                      +.++|.|+.|++.|.....|..|++.|+++++|.|..|++.|.+...|..|+..+.                        
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~------------------------   59 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC------------------------   59 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC------------------------
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh------------------------
Confidence            44567777777777777777777777776666666666666666665555555432                        


Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      .+.++++|.|.+|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++.+|+++.
T Consensus        60 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           60 MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             cCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            245778899999999999999999999999999999999999999999999999878898763

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=4.1e-25  Score=169.83  Aligned_cols=110  Identities=23%  Similarity=0.415  Sum_probs=78.4

Q ss_pred             ccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCC
Q psy13793        168 LSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPT  247 (337)
Q Consensus       168 ~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~  247 (337)
                      +.++..+|.|+++|.|++|++.|.....|..|+++|++++||.|..||+.|...                          
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~--------------------------   63 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLA--------------------------   63 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSH--------------------------
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccc--------------------------
Confidence            445567777888888888888888888888888888777776666665555554                          


Q ss_pred             HHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCC------CCeecCCCccccCCc
Q psy13793        248 NSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE------RPYKCPFCPRTFASS  304 (337)
Q Consensus       248 ~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~------~~~~C~~C~k~f~~~  304 (337)
                       ..|..|+++|++++||.|++|++.|.+.+.|..|+++|+++      ++|+|.+|++.|...
T Consensus        64 -~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           64 -EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             -HHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             -cchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence             45555555566667777777777777777777777766654      458899999888654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=1.5e-24  Score=165.48  Aligned_cols=114  Identities=32%  Similarity=0.676  Sum_probs=88.9

Q ss_pred             CCccccc--cccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccc--cchhccCHHHHHH
Q psy13793        206 KGKHTCE--ICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKF  281 (337)
Q Consensus       206 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~  281 (337)
                      +++|.|.  .|++.|.+...|..|++.|...+|.|.+|++.|.....|..|++.|+++++|.|.+  |++.|.+...|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            4567776  67777777777777777775567778888888888888888888888888999975  9999999999999


Q ss_pred             HHHhccCCCCeecC--CCccccCCchHHHHHHHhhCCCCCC
Q psy13793        282 HLNQHTGERPYKCP--FCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       282 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      |+++|+++++|.|+  .|++.|.+.+.|..|+ ++|+++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~H~~~k~  122 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTHAKAKN  122 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHH-HHHC----
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHH-HHHccccc
Confidence            99999999999996  4999999999999995 77888764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=3.3e-24  Score=162.21  Aligned_cols=110  Identities=32%  Similarity=0.696  Sum_probs=80.8

Q ss_pred             CCCcccccc--ccccccCHHHHHHHHHhcCC-ccccCC--ccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHH
Q psy13793        205 PKGKHTCEI--CFRIFKTEINLTRHLECHDT-VELSCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDL  279 (337)
Q Consensus       205 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L  279 (337)
                      ++++|.|..  |++.|.+...|..|++.|.+ .+|.|+  .|++.|.....|..|++.|+++++|.|.+|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            344455543  55555555555555554433 445665  5777777777777777788888889999999999999999


Q ss_pred             HHHHHhccCCCCeec--CCCccccCCchHHHHHHHhhC
Q psy13793        280 KFHLNQHTGERPYKC--PFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       280 ~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      ..|+++|+++++|.|  +.|++.|.+.+.|..|+ ++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH-NMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHH-HTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHH-hcC
Confidence            999999999899999  78999999999999995 665

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=7.3e-25  Score=168.47  Aligned_cols=76  Identities=17%  Similarity=0.272  Sum_probs=68.0

Q ss_pred             cccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC
Q psy13793        158 KKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       158 ~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      +...|.....|..|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+||+.|.....|..|++.|++
T Consensus        28 C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           28 CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             TCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             CCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence            3445566666777789999999999999999999999999999999999999999999999999999999988765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=167.03  Aligned_cols=130  Identities=29%  Similarity=0.577  Sum_probs=104.5

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHH-cCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHH
Q psy13793        175 FSSGTRYQCPLCNKKINTKSNLRRHLQA-HKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRA  253 (337)
Q Consensus       175 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~  253 (337)
                      .....+|.|..|++.|.+...|..|++. |.+..+.....|                   ..|.|.+|++.|.....|..
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-------------------~~~~C~~C~~~f~~~~~l~~   80 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVN   80 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-------------------CBTTCTTSSCCCSSHHHHHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-------------------cccCCCCcccccCCHHHHHH
Confidence            3455678888888888888888888876 555444322222                   23788999999999999999


Q ss_pred             HHHHhCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecCC--CccccCCchHHHHHHHhhCCCCCCCCCC
Q psy13793        254 HMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGETLPDIS  324 (337)
Q Consensus       254 H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~  324 (337)
                      |++.|+++++|.|.+  |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ ++|+++++...+
T Consensus        81 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~c~  154 (155)
T 2rpc_A           81 HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM-HVHTSDKSGPSS  154 (155)
T ss_dssp             HTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS-TTTTSCCCSCSC
T ss_pred             HHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH-HHhcCCCCCCCC
Confidence            999999999999988  9999999999999999999999999997  999999999999995 789988876544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=4.2e-24  Score=169.53  Aligned_cols=112  Identities=23%  Similarity=0.541  Sum_probs=71.5

Q ss_pred             ccccCccccccccccc-cCCCCc--------ccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHH
Q psy13793        159 KTKITASNLLSYNNAM-FSSGTR--------YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLE  229 (337)
Q Consensus       159 ~~~~~~~~~~~~~~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  229 (337)
                      ...+.....|..|+.. |.+..+        |.|+.|++.|.....|..|+++|+++++|.|..                
T Consensus        32 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------   95 (155)
T 2rpc_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF----------------   95 (155)
T ss_dssp             CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSC----------------
T ss_pred             CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCc----------------
Confidence            3445555555566665 777655        566666666666666666666666655555544                


Q ss_pred             hcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        230 CHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       230 ~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                               +.|++.|.....|..|++.|++++||.|.+  |++.|.+...|..|+++|++++||.|.
T Consensus        96 ---------~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           96 ---------PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ---------TTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ---------CCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence                     015555555555555656666677777775  777777777777777777777777774

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=7.3e-24  Score=160.33  Aligned_cols=111  Identities=32%  Similarity=0.645  Sum_probs=105.8

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHHcCCCCccccc--cccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHH
Q psy13793        176 SSGTRYQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCE--ICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNST  250 (337)
Q Consensus       176 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~  250 (337)
                      +++++|.|.+  |++.|.+...|..|++.|+++++|.|.  .|++.|.+...|..|++.|.+ .+|.|++|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4568899997  999999999999999999999999999  799999999999999999875 77999999999999999


Q ss_pred             HHHHHHHhCCCCCccc--cccchhccCHHHHHHHHHhc
Q psy13793        251 LRAHMISHSTERPHNC--PHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       251 l~~H~~~h~~~k~~~C--~~C~~~f~~~~~L~~H~~~H  286 (337)
                      |..|++.|++++||.|  +.|++.|.+.+.|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  89999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=5.7e-24  Score=162.18  Aligned_cols=115  Identities=30%  Similarity=0.612  Sum_probs=102.5

Q ss_pred             CCccccc--ccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC-ccccCCc--cCCCCCCHHHHH
Q psy13793        178 GTRYQCP--LCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPD--CNRVYPTNSTLR  252 (337)
Q Consensus       178 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~  252 (337)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|..|++.|.+...|..|++.|.+ .+|.|..  |++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4679999  8999999999999999999 88999999999999999999999999976 6799986  999999999999


Q ss_pred             HHHHHhCCCCCcccc--ccchhccCHHHHHHHHHhccCCCCee
Q psy13793        253 AHMISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYK  293 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~  293 (337)
                      .|++.|++++||.|+  .|++.|.+.+.|..|+++|+++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999999999996  59999999999999999999998864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.1e-21  Score=149.41  Aligned_cols=116  Identities=28%  Similarity=0.612  Sum_probs=92.0

Q ss_pred             cCCCceecCCCCCcCCChhHHHhHHhhccCccccCcccceeeecccccccccccccccccccCCCCCCccCCCCCcccCc
Q psy13793         72 NGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIYYTFTEDLREREDGEKRKHWIDENGGGENEMETPTPKKIGI  151 (337)
Q Consensus        72 ~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (337)
                      +|+++|.|++|++.|.+...|..|+++|.+                                                  
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------------------------------------------   32 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG--------------------------------------------------   32 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS--------------------------------------------------
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC--------------------------------------------------
Confidence            578899999999999999999999988743                                                  


Q ss_pred             cccccccccccCccccccccccccCCCCcccccccccccCCHHHHHHHHHHc---CCCCccccccccccccCHHHHHHHH
Q psy13793        152 REKVNWKKTKITASNLLSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHL  228 (337)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~C~~~f~~~~~l~~H~  228 (337)
                                                +++|.|+.|++.|.....|..|+..+   .++++                    
T Consensus        33 --------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~--------------------   66 (124)
T 2dlq_A           33 --------------------------EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV--------------------   66 (124)
T ss_dssp             --------------------------CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC--------------------
T ss_pred             --------------------------CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC--------------------
Confidence                                      35699999999999999999999864   34444                    


Q ss_pred             HhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHH-hccCCC
Q psy13793        229 ECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGER  290 (337)
Q Consensus       229 ~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~  290 (337)
                             |.|++|++.|.....|..|++.|++++||.|.+|++.|.+...|..|++ .|.++.
T Consensus        67 -------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           67 -------FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             -------EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             -------eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence                   5555566666666667777777777788888888888888888888876 466543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3e-20  Score=134.69  Aligned_cols=89  Identities=29%  Similarity=0.642  Sum_probs=81.3

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHH
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRK  312 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  312 (337)
                      .++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+ 
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-   84 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL-   84 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH-
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH-
Confidence            3678899999999999999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             hhCCCCCCCC
Q psy13793        313 RMHEGETLPD  322 (337)
Q Consensus       313 ~~H~~~~~~~  322 (337)
                      ++|.+++.|.
T Consensus        85 ~~h~~~~~p~   94 (96)
T 2dmd_A           85 RSHTGDSGPS   94 (96)
T ss_dssp             TTCCSCCCCC
T ss_pred             HHhcCCCCCC
Confidence            8898887664

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=6.8e-20  Score=135.40  Aligned_cols=89  Identities=31%  Similarity=0.639  Sum_probs=78.9

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHH
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRK  312 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  312 (337)
                      .++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+ 
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-   93 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK-   93 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH-
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH-
Confidence            3568888888999989999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             hhCCCCCCCC
Q psy13793        313 RMHEGETLPD  322 (337)
Q Consensus       313 ~~H~~~~~~~  322 (337)
                      ++|.+++++.
T Consensus        94 ~~H~~~~~~~  103 (106)
T 2ee8_A           94 TLHMQTSSPT  103 (106)
T ss_dssp             HHTTSCCCCC
T ss_pred             HHhCCCCCCc
Confidence            8898887764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=6e-20  Score=132.87  Aligned_cols=86  Identities=31%  Similarity=0.755  Sum_probs=80.1

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCC--CCeecCCCccccCCchHHHHH
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE--RPYKCPFCPRTFASSGNCFSH  310 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~--~~~~C~~C~k~f~~~~~L~~H  310 (337)
                      +.+|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++|+++  ++|.|++|++.|.+...|..|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999997  999999999999999999999


Q ss_pred             HHhhCCCC
Q psy13793        311 RKRMHEGE  318 (337)
Q Consensus       311 ~~~~H~~~  318 (337)
                      ++++|+++
T Consensus        85 ~~~~H~~~   92 (95)
T 2yt9_A           85 IKQVHSGP   92 (95)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhcCCC
Confidence            87899875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=4.1e-20  Score=129.80  Aligned_cols=82  Identities=39%  Similarity=0.799  Sum_probs=76.3

Q ss_pred             cccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhh
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRM  314 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~  314 (337)
                      +|.|.+|++.|.....|..|++.|.++++|.|..|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+ ++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS-RK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH-HH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH-Hh
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999995 77


Q ss_pred             CCC
Q psy13793        315 HEG  317 (337)
Q Consensus       315 H~~  317 (337)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            865

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.8e-20  Score=137.06  Aligned_cols=90  Identities=17%  Similarity=0.266  Sum_probs=44.0

Q ss_pred             cCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHH
Q psy13793        203 HKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       203 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H  282 (337)
                      |+++++|.|..|++.|.....|..|++.| .++|.|.+|++.|.....|..|+. |++++||.|.+|++.|.+...|..|
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHH
Confidence            44444444444444444444444444443 233445555555555555555543 5555555555555555555555555


Q ss_pred             HH-hccCCCCeec
Q psy13793        283 LN-QHTGERPYKC  294 (337)
Q Consensus       283 ~~-~H~~~~~~~C  294 (337)
                      ++ +|+++++|.|
T Consensus        89 ~~~~H~~~~~~~~  101 (107)
T 1wjp_A           89 QVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHTSCCCCCCCC
T ss_pred             HHHHcCCCCCCCC
Confidence            54 4555555544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=6.5e-20  Score=131.23  Aligned_cols=85  Identities=32%  Similarity=0.774  Sum_probs=76.8

Q ss_pred             ccccCC--ccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHH
Q psy13793        234 VELSCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       234 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      ++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            568887  599999999999999999999999999999999999999999999999999999999999999999999995


Q ss_pred             HhhCCCCC
Q psy13793        312 KRMHEGET  319 (337)
Q Consensus       312 ~~~H~~~~  319 (337)
                       ++|++++
T Consensus        83 -~~H~~~k   89 (90)
T 1a1h_A           83 -KIHLRQK   89 (90)
T ss_dssp             -GGGGC--
T ss_pred             -HHhcccC
Confidence             7898875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=3.1e-19  Score=131.82  Aligned_cols=90  Identities=27%  Similarity=0.567  Sum_probs=56.9

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHH
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMI  256 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  256 (337)
                      ..++|.|+.|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.                          
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--------------------------   67 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI--------------------------   67 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG--------------------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH--------------------------
Confidence            456677777777777777777777777776666666666555555555555544                          


Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCee
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK  293 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  293 (337)
                       |+++++|.|.+|++.|.+...|..|+++|+++++|.
T Consensus        68 -h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           68 -HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             -SCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             -hCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence             445555555555555555555555555555555554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.2e-19  Score=134.43  Aligned_cols=94  Identities=20%  Similarity=0.269  Sum_probs=85.7

Q ss_pred             HhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHH
Q psy13793        229 ECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNC  307 (337)
Q Consensus       229 ~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L  307 (337)
                      +.|.+ ++|.|.+|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|++ |+++++|.|++|++.|.+...|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            34444 67999999999999999999999984  79999999999999999999996 9999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCc
Q psy13793        308 FSHRKRMHEGETLPDISL  325 (337)
Q Consensus       308 ~~H~~~~H~~~~~~~~~~  325 (337)
                      ..|++.+|+++++...+.
T Consensus        86 ~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCCC
Confidence            999867999998877654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=1e-19  Score=118.63  Aligned_cols=59  Identities=32%  Similarity=0.692  Sum_probs=55.1

Q ss_pred             CCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      .||||.|.+|+++|.+.+.|..|+++|+|++||.|++||+.|.+.+.|..|+ ++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~-~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHL-KVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHG-GGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHh-CccCCCC
Confidence            3799999999999999999999999999999999999999999999999995 8999975

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.3e-19  Score=128.07  Aligned_cols=88  Identities=32%  Similarity=0.676  Sum_probs=58.5

Q ss_pred             CCCccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHH
Q psy13793        205 PKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHL  283 (337)
Q Consensus       205 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~  283 (337)
                      ++++|.|..|++.|.....|..|++.|.. .+|.|++|++.|.....|..|++.|+++++|.|.+|++.|.+...|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            34445555555555555555555554443 44566666666666667777777777778888888888888888888888


Q ss_pred             HhccCCCCe
Q psy13793        284 NQHTGERPY  292 (337)
Q Consensus       284 ~~H~~~~~~  292 (337)
                      ++|+++++.
T Consensus        85 ~~h~~~~~p   93 (96)
T 2dmd_A           85 RSHTGDSGP   93 (96)
T ss_dssp             TTCCSCCCC
T ss_pred             HHhcCCCCC
Confidence            888887653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=5.6e-19  Score=126.32  Aligned_cols=85  Identities=28%  Similarity=0.584  Sum_probs=63.2

Q ss_pred             CCccccc--cccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHH
Q psy13793        206 KGKHTCE--ICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       206 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H  282 (337)
                      ++||.|.  .|++.|.....|..|++.|.+ .+|.|..|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4556665  466666666666666666543 5567777777777788888888888888899999999999999999999


Q ss_pred             HHhccCCC
Q psy13793        283 LNQHTGER  290 (337)
Q Consensus       283 ~~~H~~~~  290 (337)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99998875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=2.7e-20  Score=139.76  Aligned_cols=98  Identities=18%  Similarity=0.279  Sum_probs=51.7

Q ss_pred             HHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCc-cccccchhc-
Q psy13793        196 LRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPH-NCPHCEKTF-  273 (337)
Q Consensus       196 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~-~C~~C~~~f-  273 (337)
                      |..|+++|++++||.|..|++.|.....|..|++.+.                         |.+++++ .|.+|++.| 
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~-------------------------h~~~~~~~~C~~C~~~f~   61 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG-------------------------HYRDDNHETDNNNPKRWS   61 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTC-------------------------CCBCSCCCCCCCCCSCCS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhC-------------------------ccccCCCccCCCCCcccc
Confidence            3445555555555555555555555555555544400                         2233332 255555555 


Q ss_pred             -cCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        274 -KRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       274 -~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                       .....|..|+++|++++||.|++|++.|.+.+.|..|++..|..+
T Consensus        62 f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             cccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence             555556666666666666666666666666666666654444433

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=2.2e-20  Score=140.28  Aligned_cols=79  Identities=10%  Similarity=0.170  Sum_probs=69.5

Q ss_pred             HHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHh--ccCCCCee-cCCCcccc--CCchHHHHHHHhhCCCCCCCCC
Q psy13793        249 STLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQ--HTGERPYK-CPFCPRTF--ASSGNCFSHRKRMHEGETLPDI  323 (337)
Q Consensus       249 ~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~--H~~~~~~~-C~~C~k~f--~~~~~L~~H~~~~H~~~~~~~~  323 (337)
                      ..|..|++.|++++||.|.+|++.|.+...|..|+++  |.+.+++. |++|++.|  .....|..|+ ++|+++++...
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~C   83 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCBC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcceEC
Confidence            4567788999999999999999999999999999999  88887765 99999999  8999999995 89999998877


Q ss_pred             CcccC
Q psy13793        324 SLDEM  328 (337)
Q Consensus       324 ~~~~~  328 (337)
                      ..+..
T Consensus        84 ~~C~k   88 (115)
T 2dmi_A           84 MYCGH   88 (115)
T ss_dssp             SSSCC
T ss_pred             CCCCC
Confidence            66543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=1.2e-18  Score=122.22  Aligned_cols=81  Identities=32%  Similarity=0.698  Sum_probs=58.4

Q ss_pred             ccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhc
Q psy13793        208 KHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       208 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      ||.|..|++.|.....|..|++.|.+ .+|.|+.|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            35566666666666666666655543 45667777777777777777777788888888888888888888888888888


Q ss_pred             cC
Q psy13793        287 TG  288 (337)
Q Consensus       287 ~~  288 (337)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            65

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4e-18  Score=126.69  Aligned_cols=81  Identities=30%  Similarity=0.597  Sum_probs=69.6

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHh
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKR  313 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  313 (337)
                      ++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|++.
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            56777 77788888888888888888889999999999999999999999999999999999999999999999999744


Q ss_pred             hC
Q psy13793        314 MH  315 (337)
Q Consensus       314 ~H  315 (337)
                      .|
T Consensus        88 ~~   89 (110)
T 2csh_A           88 CT   89 (110)
T ss_dssp             HH
T ss_pred             cc
Confidence            44

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.2e-17  Score=120.64  Aligned_cols=86  Identities=27%  Similarity=0.546  Sum_probs=51.5

Q ss_pred             CCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHH
Q psy13793        177 SGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMI  256 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  256 (337)
                      ++++|.|+.|++.|.....|..|++.|+++++|.|..|++.|                           .....|..|++
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f---------------------------~~~~~l~~H~~   56 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF---------------------------KRKDRMSYHVR   56 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEE---------------------------SCHHHHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCcc---------------------------CCHHHHHHHHH
Confidence            445566666666666666666666666555555555555554                           45555555555


Q ss_pred             HhCCC--CCccccccchhccCHHHHHHHHH-hccCC
Q psy13793        257 SHSTE--RPHNCPHCEKTFKRNQDLKFHLN-QHTGE  289 (337)
Q Consensus       257 ~h~~~--k~~~C~~C~~~f~~~~~L~~H~~-~H~~~  289 (337)
                      .|+++  ++|.|.+|++.|.+...|..|++ +|.++
T Consensus        57 ~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           57 SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            55554  66777777777777777777764 56554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=9.3e-18  Score=122.39  Aligned_cols=83  Identities=34%  Similarity=0.752  Sum_probs=75.0

Q ss_pred             ccccCCc--cCCCCCCHHHHHHHHHHhCCCCCcccc--ccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHH
Q psy13793        234 VELSCPD--CNRVYPTNSTLRAHMISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFS  309 (337)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~  309 (337)
                      +.|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            5678886  999999999999999999999999996  699999999999999999999999999999999999999999


Q ss_pred             HHHhhCCC
Q psy13793        310 HRKRMHEG  317 (337)
Q Consensus       310 H~~~~H~~  317 (337)
                      |+ ++|++
T Consensus        94 H~-~~H~~  100 (100)
T 2ebt_A           94 HM-KRHQN  100 (100)
T ss_dssp             HH-HHHCC
T ss_pred             HH-HHhCC
Confidence            95 77864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.72  E-value=6.2e-18  Score=120.55  Aligned_cols=82  Identities=34%  Similarity=0.739  Sum_probs=74.7

Q ss_pred             ccccCCc--cCCCCCCHHHHHHHHHHhCCCCCcccc--ccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHH
Q psy13793        234 VELSCPD--CNRVYPTNSTLRAHMISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFS  309 (337)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~  309 (337)
                      ..|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            4678888  999999999999999999999999997  699999999999999999999999999999999999999999


Q ss_pred             HHHhhCC
Q psy13793        310 HRKRMHE  316 (337)
Q Consensus       310 H~~~~H~  316 (337)
                      |+ ++|.
T Consensus        84 H~-~~H~   89 (89)
T 2wbs_A           84 HM-KRHF   89 (89)
T ss_dssp             HG-GGGC
T ss_pred             HH-HhhC
Confidence            95 7773

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.71  E-value=6.1e-19  Score=125.62  Aligned_cols=82  Identities=20%  Similarity=0.373  Sum_probs=76.0

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHh
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKR  313 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  313 (337)
                      ++|.|++|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|+++|++ .+|.|+.|++.|.+...|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999885 889999999999999999999988


Q ss_pred             hCC
Q psy13793        314 MHE  316 (337)
Q Consensus       314 ~H~  316 (337)
                      .|.
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=4.9e-18  Score=110.63  Aligned_cols=58  Identities=29%  Similarity=0.612  Sum_probs=54.8

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ++||.|.+||+.|...+.|..|+++|++++||.|.+|+++|.+.+.|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5789999999999999999999999999999999999999999999999999999975

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=8e-18  Score=125.08  Aligned_cols=83  Identities=23%  Similarity=0.444  Sum_probs=47.5

Q ss_pred             CCCCccccccccccccCHHHHHHHHHhcCC-ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHH
Q psy13793        204 KPKGKHTCEICFRIFKTEINLTRHLECHDT-VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       204 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H  282 (337)
                      +++++|.| .|++.|.....|..|++.|.. .+|.|.+|++.|.....|..|++.|+++++|.|.+|++.|.+...|..|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            33444444 344444444444444444332 3345555555555555666666666667777777777777777777777


Q ss_pred             HHhcc
Q psy13793        283 LNQHT  287 (337)
Q Consensus       283 ~~~H~  287 (337)
                      +++|+
T Consensus        85 ~~~~~   89 (110)
T 2csh_A           85 VTSCT   89 (110)
T ss_dssp             HHHHH
T ss_pred             HHHcc
Confidence            77664

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.67  E-value=7.4e-17  Score=113.76  Aligned_cols=77  Identities=29%  Similarity=0.604  Sum_probs=72.0

Q ss_pred             cccC--CccCCCCCCHHHHHHHHHHhCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecCC---CccccCCchHH
Q psy13793        235 ELSC--PDCNRVYPTNSTLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF---CPRTFASSGNC  307 (337)
Q Consensus       235 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~---C~k~f~~~~~L  307 (337)
                      +|.|  +.|++.|.....|..|++.|.+++||.|++  |++.|.+...|..|+++|++   |.|+.   |++.|.+.+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4789  889999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHhhC
Q psy13793        308 FSHRKRMH  315 (337)
Q Consensus       308 ~~H~~~~H  315 (337)
                      ..|+ ++|
T Consensus        78 ~~H~-~~h   84 (85)
T 2j7j_A           78 LKHV-AEC   84 (85)
T ss_dssp             HHHH-HHC
T ss_pred             HHHH-Hhc
Confidence            9997 444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=8e-17  Score=112.77  Aligned_cols=63  Identities=27%  Similarity=0.540  Sum_probs=59.1

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      .+.+.++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|.+|++++|++|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            456778999999999999999999999999999999999999999999999999989999874

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=115.44  Aligned_cols=79  Identities=19%  Similarity=0.307  Sum_probs=71.8

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCccccccchhc-cCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCC
Q psy13793        242 NRVYPTNSTLRAHMISHSTERPHNCPHCEKTF-KRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       242 ~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f-~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      ...|.....|..|++.|.+++||.|.+|++.| .+...|..|+++| ++++|.|.+|++.|.+.+.|..|++++|+++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            45677888899999999999999999999999 9999999999999 999999999999999999999996589987644


Q ss_pred             C
Q psy13793        321 P  321 (337)
Q Consensus       321 ~  321 (337)
                      .
T Consensus        92 ~   92 (96)
T 2ctd_A           92 G   92 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=2e-16  Score=115.27  Aligned_cols=85  Identities=26%  Similarity=0.564  Sum_probs=57.2

Q ss_pred             CCCcccccc--cccccCCHHHHHHHHHHcCCCCccccc--cccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHH
Q psy13793        177 SGTRYQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCE--ICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLR  252 (337)
Q Consensus       177 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~  252 (337)
                      ..++|.|.+  |++.|.....|..|++.|+++++|.|.  .|++.|.                           ....|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~---------------------------~~~~l~   64 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA---------------------------RSDELT   64 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEES---------------------------SHHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccC---------------------------CHHHHH
Confidence            346688876  888888888888888888777777664  3555554                           455555


Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      .|++.|++++||.|.+|++.|.+...|..|+++|++
T Consensus        65 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           65 RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            555556666666666666666666666666666653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=1.9e-17  Score=120.30  Aligned_cols=81  Identities=16%  Similarity=0.239  Sum_probs=71.6

Q ss_pred             CCCCHHHHHHHHHHhCCCCCccccccchhcc-CHHHHHHHHHhccC-CCCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        244 VYPTNSTLRAHMISHSTERPHNCPHCEKTFK-RNQDLKFHLNQHTG-ERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       244 ~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~-~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      .+.....+..|++.|.++++|.|.+|++.|. +...|..|+++|++ +++|.|++|++.|.+...|..|+ ++|.++++.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~-~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT-MAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH-HHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH-HHHcCCCCC
Confidence            4555666788999999999999999999999 99999999999999 99999999999999999999996 778888775


Q ss_pred             CCCc
Q psy13793        322 DISL  325 (337)
Q Consensus       322 ~~~~  325 (337)
                      ....
T Consensus        84 ~~~~   87 (98)
T 2gqj_A           84 DAEA   87 (98)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            4443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=1.7e-16  Score=113.00  Aligned_cols=81  Identities=27%  Similarity=0.692  Sum_probs=57.9

Q ss_pred             Ccccccc--ccccccCHHHHHHHHHhcCC-ccccCC--ccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHH
Q psy13793        207 GKHTCEI--CFRIFKTEINLTRHLECHDT-VELSCP--DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKF  281 (337)
Q Consensus       207 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~  281 (337)
                      .+|.|..  |++.|.....|..|++.|.+ .+|.|+  .|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3455555  55555555555555555543 445664  477777777788888888888888999999999999999999


Q ss_pred             HHHhcc
Q psy13793        282 HLNQHT  287 (337)
Q Consensus       282 H~~~H~  287 (337)
                      |+++|.
T Consensus        84 H~~~H~   89 (89)
T 2wbs_A           84 HMKRHF   89 (89)
T ss_dssp             HGGGGC
T ss_pred             HHHhhC
Confidence            988873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.65  E-value=9.8e-18  Score=128.36  Aligned_cols=119  Identities=18%  Similarity=0.297  Sum_probs=87.9

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHHc---CCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHH
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQAH---KPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNS  249 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~  249 (337)
                      .++++.++|.|...+.....  .+..+.+.+   ...+++.|++|++.|...                     ..|....
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~---------------------~~~~~~~   61 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNP---------------------QLLDESS   61 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCG---------------------GGTTTHH
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCC---------------------cccCCHH
Confidence            45677888888765543321  223332222   223456777776666422                     3345677


Q ss_pred             HHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        250 TLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       250 ~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      .|..|+ .|++++||.|.+|++.|.+...|..|+++|  ++||.|++|++.|.+.+.|..|+ +.|.|.
T Consensus        62 ~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~-~~h~~~  126 (129)
T 2wbt_A           62 YLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHV-CKKHNI  126 (129)
T ss_dssp             HHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHH-HHTTCC
T ss_pred             HHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHH-HHHCCc
Confidence            777777 588899999999999999999999999998  89999999999999999999996 777765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2e-16  Score=109.98  Aligned_cols=70  Identities=27%  Similarity=0.642  Sum_probs=62.8

Q ss_pred             CccccCCc--cCCCCCCHHHHHHHHH-HhCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecCCCccccC
Q psy13793        233 TVELSCPD--CNRVYPTNSTLRAHMI-SHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFA  302 (337)
Q Consensus       233 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~  302 (337)
                      .++|.|..  |++.|.....|..|++ .|.++++|.|.+  |++.|.+...|..|+++|+++++|.|++|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            35677765  9999999999999998 699999999998  9999999999999999999999999999999883

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=2.1e-17  Score=117.54  Aligned_cols=79  Identities=22%  Similarity=0.460  Sum_probs=47.7

Q ss_pred             CcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHh
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISH  258 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  258 (337)
                      ++|.|+.|++.|.....|..|+++|++++||.|..|++.|.....|..|++.|++                         
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------------   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-------------------------   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------------------------
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------------------------
Confidence            4566666666666666666666666666666666665555555555555555443                         


Q ss_pred             CCCCCccccccchhccCHHHHHHHHHh
Q psy13793        259 STERPHNCPHCEKTFKRNQDLKFHLNQ  285 (337)
Q Consensus       259 ~~~k~~~C~~C~~~f~~~~~L~~H~~~  285 (337)
                         .+|.|..|++.|.+...|..|++.
T Consensus        57 ---~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           57 ---LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CcchHHHHHHHHHHHhhhHHHHHH
Confidence               455666666666666666666653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.9e-16  Score=109.81  Aligned_cols=40  Identities=20%  Similarity=0.337  Sum_probs=23.9

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCCeecCCCcccc
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTF  301 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f  301 (337)
                      ++|.|.+|++.|.+...|..|+++|++++++.|..|+..|
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            4566666666666666666666666666666666665543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.3e-15  Score=103.29  Aligned_cols=66  Identities=24%  Similarity=0.524  Sum_probs=59.5

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDI  323 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~  323 (337)
                      .|.+++||.|.+|++.|.+...|..|+++|+++++|.|++|++.|.....|..|+ ++|.++++...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~p~p~   68 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGDMSGPS   68 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH-HHHHSSSCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH-HHHhCCCCCCC
Confidence            3678999999999999999999999999999999999999999999999999996 77777776543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=103.98  Aligned_cols=63  Identities=33%  Similarity=0.772  Sum_probs=54.7

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      .+.++++|.|.+|++.|.+...|..|+++|+++++|+|++|++.|.+...|.+|+ ++|+++++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp   73 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT-RIHSGEKP   73 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH-HHHCCSCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH-HhcCCCCC
Confidence            4567888999999999999999999999999999999999999999999999995 78888875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.5e-15  Score=105.18  Aligned_cols=67  Identities=22%  Similarity=0.482  Sum_probs=61.8

Q ss_pred             hCCCCCccccccchhccCHHHHHHHHHhccC---CCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCC
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTG---ERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDIS  324 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~---~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~  324 (337)
                      |++++||.|.+|++.|.+...|..|+++|++   +++|.|++|++.|.....|..|++..|.++++....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            7899999999999999999999999999996   899999999999999999999988999988765443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=1.3e-15  Score=107.27  Aligned_cols=77  Identities=25%  Similarity=0.429  Sum_probs=47.4

Q ss_pred             cccc--cccccccCCHHHHHHHHHHcCCCCcccccc--ccccccCHHHHHHHHHhcCCccccCCc---cCCCCCCHHHHH
Q psy13793        180 RYQC--PLCNKKINTKSNLRRHLQAHKPKGKHTCEI--CFRIFKTEINLTRHLECHDTVELSCPD---CNRVYPTNSTLR  252 (337)
Q Consensus       180 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~l~  252 (337)
                      ||.|  +.|++.|.....|..|+++|++++||.|..  |++.|.....|..|+++|.+  |.|..   |++.|.....|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHH
Confidence            3667  667777777777777777777666666665  66666666666666655544  45555   555555555555


Q ss_pred             HHHHHh
Q psy13793        253 AHMISH  258 (337)
Q Consensus       253 ~H~~~h  258 (337)
                      .|++.|
T Consensus        79 ~H~~~h   84 (85)
T 2j7j_A           79 KHVAEC   84 (85)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            554443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=3.9e-16  Score=119.33  Aligned_cols=82  Identities=21%  Similarity=0.444  Sum_probs=46.7

Q ss_pred             CCCcccccccccccC------CHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHH
Q psy13793        177 SGTRYQCPLCNKKIN------TKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNST  250 (337)
Q Consensus       177 ~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~  250 (337)
                      ..+.+.|+.|...|.      ....|..|+ .|++++||.|..||+.|.....|..|+++| ..+|.|++|++.|.....
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHH
Confidence            346688988877765      334444444 455556666666666666555555555555 444555555555555555


Q ss_pred             HHHHHHHhCC
Q psy13793        251 LRAHMISHST  260 (337)
Q Consensus       251 l~~H~~~h~~  260 (337)
                      |..|++.|++
T Consensus       116 l~~H~~~h~~  125 (129)
T 2wbt_A          116 ALDHVCKKHN  125 (129)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHHHCC
Confidence            5555555444

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.1e-15  Score=105.61  Aligned_cols=70  Identities=24%  Similarity=0.487  Sum_probs=62.7

Q ss_pred             HHHHHHHhCCCCCccccccchhccCHHHHHHHHH-hccCC-CCeecCCCccccCCchHHHHHHHhhCCCCCC
Q psy13793        251 LRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGE-RPYKCPFCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       251 l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~-~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      |..|+++|++++||.|.+|++.|.+...|..|++ .|.++ ++|.|++|++.|.+...|..|++..|.++.+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3457889999999999999999999999999997 68775 8999999999999999999998777877654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=8e-16  Score=108.68  Aligned_cols=77  Identities=13%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             HHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC-----ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccch
Q psy13793        197 RRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT-----VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEK  271 (337)
Q Consensus       197 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~  271 (337)
                      ..|+++|++++||.|..|++.|.....|..|++.++.     .+|.|.+|++.|.....|..|++.|++++++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            3455555555666666666666666666666554433     34666677777777777777777777777777777765


Q ss_pred             hc
Q psy13793        272 TF  273 (337)
Q Consensus       272 ~f  273 (337)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.4e-15  Score=103.96  Aligned_cols=63  Identities=35%  Similarity=0.736  Sum_probs=42.7

Q ss_pred             hCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      +.+++||.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|..|+ ++|+++++.
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~   75 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPS   75 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCC
Confidence            445666777777777777777777777777777777777777777777777774 666666553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.8e-15  Score=98.19  Aligned_cols=57  Identities=35%  Similarity=0.808  Sum_probs=53.8

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|.+|++.|.+.+.|..|+++|+++++|.|++|++.|.+.+.|..|++++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999999999999999999999999987899875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2e-15  Score=102.86  Aligned_cols=63  Identities=38%  Similarity=0.734  Sum_probs=58.6

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      ++|.+++||.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+ ++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ-RIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH-HHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH-HhcCCCC
Confidence            46889999999999999999999999999999999999999999999999999996 7888764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5.2e-15  Score=102.22  Aligned_cols=62  Identities=29%  Similarity=0.592  Sum_probs=60.3

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      .++|.|.+|++.|.....|..|++.|++++||.|.+|++.|.+...|..|+++|++++||+|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            47899999999999999999999999999999999999999999999999999999999998

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.8e-15  Score=106.69  Aligned_cols=65  Identities=25%  Similarity=0.382  Sum_probs=41.1

Q ss_pred             ccccCCccCCCCCCHHHHHHHHH-Hh---CCCCCccccccchhccCHHHHHHH-HHhccCCCCeecCCCc
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMI-SH---STERPHNCPHCEKTFKRNQDLKFH-LNQHTGERPYKCPFCP  298 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~k~~~C~~C~~~f~~~~~L~~H-~~~H~~~~~~~C~~C~  298 (337)
                      ++|.|..|++.|.....|..|++ .|   .+++||.|.+|++.|.+.+.|..| +++|+|++||.|.++.
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            45666666666666666666665 35   445666666666666666666666 5666666666666533

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.8e-15  Score=102.11  Aligned_cols=72  Identities=21%  Similarity=0.486  Sum_probs=39.6

Q ss_pred             CCCcccccc--cccccCCHHHHHHHHH-HcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHH
Q psy13793        177 SGTRYQCPL--CNKKINTKSNLRRHLQ-AHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRA  253 (337)
Q Consensus       177 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~  253 (337)
                      ++++|.|..  |++.|.....|..|++ .|.++++|.|..                         +.|++.|.....|..
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~-------------------------~~C~k~f~~~~~L~~   58 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE-------------------------PACGKSFNFKKHLKE   58 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSC-------------------------TTTCCEESSHHHHHH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCC-------------------------CCCcCccCCHHHHHH
Confidence            344555554  5555555555555555 455555555544                         005555555555555


Q ss_pred             HHHHhCCCCCccccccchhc
Q psy13793        254 HMISHSTERPHNCPHCEKTF  273 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f  273 (337)
                      |+++|++++||.|.+|++.|
T Consensus        59 H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           59 HMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             HHHHHHTSCCCSCCSSSCCC
T ss_pred             HHHHhCCCCCeeCCCCCCCC
Confidence            55556666666666666655

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=99.68  Aligned_cols=60  Identities=32%  Similarity=0.695  Sum_probs=54.0

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCe
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      .++|.|..|++.|.....|..|++.|++++||.|.+|++.|.+...|..|+++|++++||
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            367888888999999999999999999999999999999999999999999999999886

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=3.8e-15  Score=107.99  Aligned_cols=67  Identities=19%  Similarity=0.319  Sum_probs=52.6

Q ss_pred             CCCCCccccccchhccCHHHHHHHHH-hc---cCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCCc
Q psy13793        259 STERPHNCPHCEKTFKRNQDLKFHLN-QH---TGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISL  325 (337)
Q Consensus       259 ~~~k~~~C~~C~~~f~~~~~L~~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~  325 (337)
                      .|++||.|..|++.|.+.+.|..|++ +|   ++++||.|++||+.|..++.|..|++++|+|+++.....
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            57788888888888888888888887 47   567888888888888888888888447888887765543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=7.2e-15  Score=95.12  Aligned_cols=56  Identities=39%  Similarity=0.731  Sum_probs=45.2

Q ss_pred             CCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhC
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |++||.|.+|++.|.+...|..|+++|++++||.|++|++.|.....|..|++..|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999999999999999964433

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.53  E-value=1.2e-14  Score=93.99  Aligned_cols=56  Identities=30%  Similarity=0.612  Sum_probs=46.4

Q ss_pred             CccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      ||.|.+|++.|.+.+.|..|+++|+++++|.|++|++.|.+.+.|..|+ ++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM-KSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHH-HSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHH-HHhcccC
Confidence            5788888888888888888888888888888888888888888888885 7777654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=3.2e-15  Score=108.44  Aligned_cols=77  Identities=25%  Similarity=0.407  Sum_probs=51.5

Q ss_pred             cCHHHHHHHHHhcCC-ccccCCccCCCCC-CHHHHHHHHHHhCC-CCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        219 KTEINLTRHLECHDT-VELSCPDCNRVYP-TNSTLRAHMISHST-ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       219 ~~~~~l~~H~~~h~~-~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      .....+..|+++|.+ ++|.|.+|++.|. ....|..|++.|++ ++||.|.+|++.|.+...|..|+++|++++|+.-.
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            333444556666544 5566666666676 67777777777766 77777777777777777777777777777765443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=6.1e-15  Score=98.58  Aligned_cols=60  Identities=25%  Similarity=0.582  Sum_probs=54.4

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHh-c-cCCCCeecCCCccccCCchHHHHHHHhhC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQ-H-TGERPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~-H-~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      +.|++++||.|..|++.|.+...|..|+++ | .++++|.|++|++.|.+.+.|..|++..|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            468899999999999999999999999997 7 58999999999999999999999975554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.8e-14  Score=103.84  Aligned_cols=76  Identities=21%  Similarity=0.371  Sum_probs=41.7

Q ss_pred             ccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccc
Q psy13793        189 KINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPH  268 (337)
Q Consensus       189 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~  268 (337)
                      .|.....|..|++.|.++++|.|..||+.|.                          .....|..|++.| +++||.|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~--------------------------~~~~~L~~H~~~h-~~k~~~C~~   67 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGR--------------------------KTIEGLKKHMENC-KQEMFTCHH   67 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEE--------------------------SSHHHHHHHHHHH-CCCCCCCSS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcc--------------------------cCHHHHHHHHHHH-CCCCeECCC
Confidence            4455555666666655555555555555550                          4445555555555 555556666


Q ss_pred             cchhccCHHHHHHH-HHhccCCCC
Q psy13793        269 CEKTFKRNQDLKFH-LNQHTGERP  291 (337)
Q Consensus       269 C~~~f~~~~~L~~H-~~~H~~~~~  291 (337)
                      |++.|.+.+.|..| +++|+++..
T Consensus        68 Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           68 CGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCeeCCHHHHHHHhHHhcCCCCC
Confidence            66666666666666 555554433

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=8.7e-14  Score=89.91  Aligned_cols=56  Identities=25%  Similarity=0.578  Sum_probs=53.1

Q ss_pred             cccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        235 ELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       235 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +|.|++|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57899999999999999999999999999999999999999999999999998875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=8.8e-14  Score=94.62  Aligned_cols=63  Identities=24%  Similarity=0.415  Sum_probs=56.0

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTV  234 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  234 (337)
                      ..+|+++++|.|+.|++.|.....|..|+++|++++||.|..|++.|.....|..|+++|.+.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            456788899999999999999999999999999999999999999999999999999888654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=9.3e-14  Score=93.93  Aligned_cols=59  Identities=25%  Similarity=0.516  Sum_probs=47.4

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCe
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      ++|.|.+|++.|.....|..|++.|++++||.|.+|++.|.+...|..|+++|++++|.
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            56777777777777778888887788888888888888888888888888888887763

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=1e-13  Score=96.94  Aligned_cols=57  Identities=23%  Similarity=0.444  Sum_probs=49.1

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHH-hccCCC
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGER  290 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~  290 (337)
                      +.|.|++|++.|.....|..|+++|++++||.|.+|+++|.+...|.+|++ +|+++.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            557888888888888889999999999999999999999999999999974 787764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=1.7e-13  Score=88.52  Aligned_cols=56  Identities=27%  Similarity=0.666  Sum_probs=49.7

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccC
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      +++|.|++|++.|.....|..|++.|++++||.|.+|++.|.+...|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999999999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.1e-13  Score=92.94  Aligned_cols=59  Identities=36%  Similarity=0.834  Sum_probs=54.1

Q ss_pred             HhCCCCCcccc--ccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        257 SHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       257 ~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      .|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|...+.|..|+ ++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-TTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHH-HhcC
Confidence            47789999997  59999999999999999999999999999999999999999995 7774

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=4.2e-13  Score=96.47  Aligned_cols=60  Identities=28%  Similarity=0.472  Sum_probs=44.1

Q ss_pred             ccCCccCCCCCCHHHHHHHHHH-hCCCCC--------ccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        236 LSCPDCNRVYPTNSTLRAHMIS-HSTERP--------HNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       236 ~~C~~C~~~f~~~~~l~~H~~~-h~~~k~--------~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      +.|..|++.|.....|..|++. |.++++        |.|.+|++.|.+...|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666666666665 666555        78888888888888888888888888888875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.4e-16  Score=106.95  Aligned_cols=69  Identities=17%  Similarity=0.291  Sum_probs=44.7

Q ss_pred             HHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhcc
Q psy13793        195 NLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFK  274 (337)
Q Consensus       195 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~  274 (337)
                      .|..|+++|.+++||.|..||+.|.....|..                                  +++|.|.+|++.|.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----------------------------------~~~~~C~~C~~~f~   50 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----------------------------------RKTPMCEKCRKDSC   50 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----------------------------------SSSCCCHHHHHTCS
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----------------------------------CCCCCCCCCChhhc
Confidence            34455566666666666666666655433222                                  56677777777777


Q ss_pred             CHHHHHHHHHhccCCCCeecCCC
Q psy13793        275 RNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       275 ~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +.+.|..|+++|+++++|.|++|
T Consensus        51 ~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           51 QEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CHHHHHHHHHhhcCCCCCCCCCC
Confidence            77777777777777777777766

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.8e-13  Score=89.71  Aligned_cols=61  Identities=25%  Similarity=0.505  Sum_probs=50.5

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHH-c-CCCCccccccccccccCHHHHHHHHHhcCC
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQA-H-KPKGKHTCEICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      .+|+++++|.|+.|++.|.....|..|++. | .+++||.|..|++.|.....|..|++.+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456778888898899889888888888887 6 578888888888888888888888887654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=7.5e-13  Score=91.19  Aligned_cols=66  Identities=18%  Similarity=0.446  Sum_probs=53.0

Q ss_pred             ccccccccCCCCcccccccccccCCHHHHHHHHH-HcCCC-CccccccccccccCHHHHHHHHHhcCC
Q psy13793        168 LSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQ-AHKPK-GKHTCEICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       168 ~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      +..|+.+|+++++|.|++|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++.++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3456778888888888888888888888888886 56664 788888888888888888888887654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.9e-13  Score=86.60  Aligned_cols=56  Identities=30%  Similarity=0.658  Sum_probs=51.6

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHH-HhccCC
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHL-NQHTGE  289 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~-~~H~~~  289 (337)
                      ++|.|+.|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            36899999999999999999999999999999999999999999999997 588765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=5.5e-13  Score=88.93  Aligned_cols=60  Identities=23%  Similarity=0.376  Sum_probs=54.2

Q ss_pred             hCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC-CCccccCCchHHHHHHHhhCCCCCC
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP-FCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~-~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      ..+++||.|..|++.|. .+.|..|+++ ++++||.|+ .|++.|..++.|..|+ ++|.+..+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~-~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHL-KDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHH-HTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHH-HhhcccCc
Confidence            35678999999999999 9999999999 999999999 9999999999999995 88876543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=8.3e-13  Score=89.92  Aligned_cols=66  Identities=27%  Similarity=0.619  Sum_probs=58.1

Q ss_pred             cccccccccCCCCccccc--ccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcC
Q psy13793        167 LLSYNNAMFSSGTRYQCP--LCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHD  232 (337)
Q Consensus       167 ~~~~~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  232 (337)
                      +..+...++.+.++|.|+  .|++.|.....|..|+++|+++++|.|..||+.|.....|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344556778889999997  599999999999999999999999999999999999999999998873

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.3e-13  Score=82.07  Aligned_cols=44  Identities=32%  Similarity=0.411  Sum_probs=40.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4.1e-13  Score=81.74  Aligned_cols=44  Identities=30%  Similarity=0.469  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.30  E-value=5.2e-13  Score=82.14  Aligned_cols=45  Identities=31%  Similarity=0.488  Sum_probs=40.5

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.2e-13  Score=82.09  Aligned_cols=44  Identities=32%  Similarity=0.474  Sum_probs=40.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=1.7e-12  Score=82.78  Aligned_cols=47  Identities=38%  Similarity=0.595  Sum_probs=43.9

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHH-hccCCCCeecCCCccccCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGERPYKCPFCPRTFAS  303 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~  303 (337)
                      .|.+++||.|.+|++.|.+...|..|++ +|++++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3678899999999999999999999997 9999999999999999986

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.1e-13  Score=82.16  Aligned_cols=44  Identities=30%  Similarity=0.501  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.7e-13  Score=81.93  Aligned_cols=44  Identities=32%  Similarity=0.490  Sum_probs=40.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.2e-13  Score=82.11  Aligned_cols=44  Identities=36%  Similarity=0.553  Sum_probs=40.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.29  E-value=5.2e-13  Score=82.10  Aligned_cols=44  Identities=27%  Similarity=0.477  Sum_probs=40.2

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            66778899999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.4e-13  Score=81.71  Aligned_cols=44  Identities=30%  Similarity=0.522  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.4e-13  Score=81.70  Aligned_cols=44  Identities=30%  Similarity=0.394  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.3e-13  Score=82.08  Aligned_cols=44  Identities=32%  Similarity=0.492  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.8e-13  Score=81.58  Aligned_cols=45  Identities=31%  Similarity=0.486  Sum_probs=40.7

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.5e-13  Score=81.40  Aligned_cols=45  Identities=27%  Similarity=0.376  Sum_probs=40.0

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.1e-13  Score=82.16  Aligned_cols=45  Identities=29%  Similarity=0.382  Sum_probs=41.3

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.1e-13  Score=82.17  Aligned_cols=44  Identities=34%  Similarity=0.507  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5e-13  Score=82.22  Aligned_cols=44  Identities=30%  Similarity=0.486  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.1e-13  Score=81.80  Aligned_cols=44  Identities=36%  Similarity=0.508  Sum_probs=40.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.5e-13  Score=82.00  Aligned_cols=45  Identities=31%  Similarity=0.479  Sum_probs=40.7

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.8e-13  Score=81.30  Aligned_cols=45  Identities=33%  Similarity=0.428  Sum_probs=40.9

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.5e-13  Score=81.66  Aligned_cols=45  Identities=31%  Similarity=0.492  Sum_probs=40.9

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.2e-13  Score=81.77  Aligned_cols=44  Identities=30%  Similarity=0.477  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.28  E-value=5.2e-13  Score=82.11  Aligned_cols=45  Identities=29%  Similarity=0.448  Sum_probs=40.0

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      +|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.28  E-value=6.4e-13  Score=81.72  Aligned_cols=44  Identities=34%  Similarity=0.490  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.2e-13  Score=82.15  Aligned_cols=45  Identities=33%  Similarity=0.436  Sum_probs=41.1

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.9e-13  Score=81.87  Aligned_cols=44  Identities=36%  Similarity=0.532  Sum_probs=40.1

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.5e-13  Score=81.39  Aligned_cols=44  Identities=32%  Similarity=0.542  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6e-13  Score=81.84  Aligned_cols=44  Identities=34%  Similarity=0.457  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.28  E-value=4.9e-13  Score=82.23  Aligned_cols=44  Identities=34%  Similarity=0.545  Sum_probs=39.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.7e-13  Score=81.64  Aligned_cols=44  Identities=32%  Similarity=0.455  Sum_probs=40.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.9e-13  Score=81.54  Aligned_cols=45  Identities=36%  Similarity=0.547  Sum_probs=40.4

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.4e-13  Score=81.69  Aligned_cols=44  Identities=36%  Similarity=0.531  Sum_probs=40.2

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=8.1e-13  Score=81.23  Aligned_cols=44  Identities=32%  Similarity=0.462  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.1e-13  Score=81.82  Aligned_cols=44  Identities=30%  Similarity=0.468  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.9e-13  Score=81.27  Aligned_cols=45  Identities=36%  Similarity=0.550  Sum_probs=40.7

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=8e-13  Score=81.27  Aligned_cols=44  Identities=25%  Similarity=0.300  Sum_probs=40.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.2e-13  Score=81.76  Aligned_cols=44  Identities=34%  Similarity=0.460  Sum_probs=40.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.27  E-value=7.1e-13  Score=81.47  Aligned_cols=44  Identities=32%  Similarity=0.471  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.7e-13  Score=81.60  Aligned_cols=44  Identities=32%  Similarity=0.523  Sum_probs=40.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.7e-12  Score=88.55  Aligned_cols=57  Identities=23%  Similarity=0.422  Sum_probs=41.5

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHcCC---CCccccccccccccCHHHHHHHHHhc
Q psy13793        175 FSSGTRYQCPLCNKKINTKSNLRRHLQAHKP---KGKHTCEICFRIFKTEINLTRHLECH  231 (337)
Q Consensus       175 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h  231 (337)
                      |+++++|.|++|++.|.....|..|+++|++   +++|.|..|++.|.....|..|++.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   61 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS   61 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHh
Confidence            4566777777777777777777777777764   67777777777777777777777443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.4e-14  Score=95.45  Aligned_cols=36  Identities=14%  Similarity=0.141  Sum_probs=31.0

Q ss_pred             CcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      ++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            458899999999998999999888888888888877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.4e-13  Score=81.42  Aligned_cols=44  Identities=36%  Similarity=0.506  Sum_probs=40.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=7.5e-13  Score=81.37  Aligned_cols=44  Identities=30%  Similarity=0.382  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.26  E-value=1.1e-12  Score=80.70  Aligned_cols=44  Identities=30%  Similarity=0.413  Sum_probs=40.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.1e-13  Score=81.47  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888889999999999998999999888888889988887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=9.8e-13  Score=80.86  Aligned_cols=44  Identities=39%  Similarity=0.542  Sum_probs=40.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.2e-13  Score=82.12  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=39.1

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678889999999999999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-12  Score=80.33  Aligned_cols=44  Identities=32%  Similarity=0.487  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888888898898888888888888888888888888865

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=80.41  Aligned_cols=44  Identities=32%  Similarity=0.467  Sum_probs=39.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHH-hccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|++ +|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5677889999999999999999999999999 9999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6e-13  Score=81.83  Aligned_cols=44  Identities=30%  Similarity=0.499  Sum_probs=38.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.23  E-value=8.3e-12  Score=84.64  Aligned_cols=57  Identities=46%  Similarity=0.885  Sum_probs=50.0

Q ss_pred             hCCCCCccccc--cchhccCHHHHHHHHHhccCCCCeecCC--CccccCCchHHHHHHHhhC
Q psy13793        258 HSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF--CPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       258 h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H  315 (337)
                      ....++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.....|.+|+ ++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR-RTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT-TTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh-hcC
Confidence            35678899988  9999999999999999999999999965  999999999999995 655

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=79.54  Aligned_cols=44  Identities=39%  Similarity=0.591  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678889999999999999999999999999999999999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.22  E-value=2.4e-13  Score=89.48  Aligned_cols=55  Identities=15%  Similarity=0.413  Sum_probs=49.0

Q ss_pred             HHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHH
Q psy13793        251 LRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCF  308 (337)
Q Consensus       251 l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~  308 (337)
                      |..|++.|++++||.|++|++.|.+.+.|.   ++|++++||.|++||+.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            345778899999999999999999999886   8999999999999999999887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=1.8e-11  Score=87.80  Aligned_cols=70  Identities=17%  Similarity=0.326  Sum_probs=54.3

Q ss_pred             cccccccccccCCHHHHHHHHHH-cCCCCccccccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHHHHHh
Q psy13793        180 RYQCPLCNKKINTKSNLRRHLQA-HKPKGKHTCEICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAHMISH  258 (337)
Q Consensus       180 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  258 (337)
                      .|.|+.|++.|.....|..|++. |.++++..+..|                   ..|.|.+|++.|.....|..|+++|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-------------------~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-------------------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccce-------------------eccCCCCCCcccCCHHHHHHHHHhc
Confidence            36788888888888888888776 766665443333                   2378999999999999999999999


Q ss_pred             CCCCCccccc
Q psy13793        259 STERPHNCPH  268 (337)
Q Consensus       259 ~~~k~~~C~~  268 (337)
                      ++++||.|..
T Consensus        86 ~~~k~~~C~~   95 (95)
T 2ej4_A           86 TGEKSGPSSG   95 (95)
T ss_dssp             HTCCCCSSCC
T ss_pred             CCCCCCCCCC
Confidence            9999999863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=8.2e-12  Score=76.23  Aligned_cols=42  Identities=31%  Similarity=0.639  Sum_probs=39.9

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCc
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCP  298 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  298 (337)
                      .|++++||.|.+|++.|.+.+.|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578999999999999999999999999999999999999997

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=6.8e-12  Score=77.78  Aligned_cols=43  Identities=30%  Similarity=0.501  Sum_probs=40.3

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCcc
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR  299 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k  299 (337)
                      .|.++++|.|.+|++.|.+...|..|+++|++++||.|++|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3678899999999999999999999999999999999999986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=4.1e-12  Score=76.32  Aligned_cols=42  Identities=31%  Similarity=0.502  Sum_probs=32.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            445677788888888888888888888888888888888774

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=5.6e-12  Score=83.96  Aligned_cols=56  Identities=21%  Similarity=0.430  Sum_probs=45.9

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCcccc-ccchhccCHHHHHHHHHhccCCCC
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNCP-HCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~-~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      ++|.|..|++.|. ...|..|+++ ++++||.|. .|++.|...+.|..|+++|...++
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            5678888888888 8888888887 888888888 888888888888888888876654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4.5e-12  Score=77.82  Aligned_cols=43  Identities=35%  Similarity=0.540  Sum_probs=34.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667788888888888888888888888888888888888863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.3e-12  Score=75.47  Aligned_cols=42  Identities=29%  Similarity=0.421  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445678888888888888888888888888888888888874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.17  E-value=4.5e-12  Score=77.82  Aligned_cols=43  Identities=33%  Similarity=0.539  Sum_probs=34.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667788888888888888888888888888888888888863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.6e-12  Score=77.37  Aligned_cols=43  Identities=35%  Similarity=0.528  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5566778888888888888888888888888888888888763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5e-12  Score=77.61  Aligned_cols=42  Identities=33%  Similarity=0.570  Sum_probs=38.6

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      ++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            468889999999999999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.3e-12  Score=77.50  Aligned_cols=43  Identities=35%  Similarity=0.524  Sum_probs=32.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777777888888888888888888877777777777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.8e-12  Score=77.31  Aligned_cols=43  Identities=30%  Similarity=0.559  Sum_probs=34.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567778888888888888888888888888888888888863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.3e-12  Score=77.52  Aligned_cols=42  Identities=31%  Similarity=0.462  Sum_probs=38.9

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      ++|.+++||.|.+|++.|.+.+.|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            468899999999999999999999999999999999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6e-12  Score=77.24  Aligned_cols=43  Identities=33%  Similarity=0.536  Sum_probs=34.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567778888888888888888888888888888888888863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.1e-12  Score=76.91  Aligned_cols=43  Identities=33%  Similarity=0.552  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.2e-12  Score=77.17  Aligned_cols=43  Identities=30%  Similarity=0.490  Sum_probs=33.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566778888888888888888888888888888888888763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.4e-12  Score=77.12  Aligned_cols=43  Identities=35%  Similarity=0.542  Sum_probs=34.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567778888888888888888888888888888888888863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.9e-12  Score=76.70  Aligned_cols=42  Identities=36%  Similarity=0.489  Sum_probs=33.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677888888888888888888888888888888888875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.15  E-value=4.7e-12  Score=80.68  Aligned_cols=49  Identities=18%  Similarity=0.344  Sum_probs=25.1

Q ss_pred             CCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCe
Q psy13793        244 VYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       244 ~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      .|.....|..|++.|++++||.|.+|++.|.+.+.|..|+++|++++||
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3444444455555555555555555555555555555555555555544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.3e-12  Score=77.15  Aligned_cols=43  Identities=35%  Similarity=0.538  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5566778888888888888888888888888888888888763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7e-12  Score=76.93  Aligned_cols=42  Identities=31%  Similarity=0.516  Sum_probs=32.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            556677778888888888888888888888888888888775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.8e-12  Score=76.97  Aligned_cols=43  Identities=33%  Similarity=0.603  Sum_probs=33.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888887763

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.7e-12  Score=77.03  Aligned_cols=43  Identities=37%  Similarity=0.578  Sum_probs=33.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5566777778888888888888888888877888888887753

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.2e-12  Score=77.15  Aligned_cols=43  Identities=35%  Similarity=0.549  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |++.|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.5e-12  Score=76.80  Aligned_cols=43  Identities=30%  Similarity=0.422  Sum_probs=33.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777888888888888888888888888888888888763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.5e-12  Score=76.56  Aligned_cols=43  Identities=30%  Similarity=0.502  Sum_probs=35.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567888888888888888888888888888888888888864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.8e-12  Score=76.18  Aligned_cols=42  Identities=29%  Similarity=0.455  Sum_probs=33.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556777788888888888888888888888888888888774

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.7e-12  Score=77.06  Aligned_cols=43  Identities=33%  Similarity=0.512  Sum_probs=33.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4556777888888888888888888888888888888888763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.9e-12  Score=75.64  Aligned_cols=42  Identities=31%  Similarity=0.532  Sum_probs=32.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            556677777888888888888888888888788877777774

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.8e-12  Score=76.97  Aligned_cols=43  Identities=33%  Similarity=0.490  Sum_probs=31.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5556777777777777777777777777777777777777753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.9e-12  Score=76.70  Aligned_cols=42  Identities=33%  Similarity=0.571  Sum_probs=33.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677888888888888888888888888888888888876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.9e-12  Score=76.71  Aligned_cols=42  Identities=31%  Similarity=0.394  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888886

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.3e-12  Score=75.77  Aligned_cols=42  Identities=29%  Similarity=0.422  Sum_probs=32.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            556677777888888888888888888888788888877774

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.6e-12  Score=76.51  Aligned_cols=42  Identities=33%  Similarity=0.564  Sum_probs=32.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556677777788888888888888888887777777777775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9e-12  Score=76.46  Aligned_cols=42  Identities=36%  Similarity=0.599  Sum_probs=33.2

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            556677788888888888888888888888888888888775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=1.3e-11  Score=74.10  Aligned_cols=41  Identities=24%  Similarity=0.381  Sum_probs=28.9

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34556677777777777777777777777777777777766

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1e-11  Score=75.39  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=25.2

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44455666666666666666666666666666666666665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.2e-12  Score=74.97  Aligned_cols=41  Identities=32%  Similarity=0.572  Sum_probs=27.4

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44556666666676677666666666666666666666665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.8e-12  Score=76.27  Aligned_cols=42  Identities=36%  Similarity=0.500  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|.+++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999989998886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=9.4e-12  Score=74.72  Aligned_cols=41  Identities=37%  Similarity=0.540  Sum_probs=27.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34456666777777777777777777777777777776665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.1e-11  Score=75.21  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            455667777777777777777777777777777777777763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8e-12  Score=75.02  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44566777777777777777777777777777777777766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-11  Score=75.49  Aligned_cols=42  Identities=31%  Similarity=0.522  Sum_probs=33.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677788888888888888888888888888888888775

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.4e-11  Score=72.22  Aligned_cols=44  Identities=16%  Similarity=0.233  Sum_probs=40.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1e-11  Score=76.23  Aligned_cols=42  Identities=29%  Similarity=0.348  Sum_probs=29.1

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccC-CCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG-ERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44556667777777777777777777777777777 6777765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-11  Score=74.24  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=34.3

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |++.|.+++||.|.+|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            455677888888888888888888888888888888888874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.8e-11  Score=72.71  Aligned_cols=45  Identities=18%  Similarity=0.316  Sum_probs=40.5

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            356788899999999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.9e-11  Score=72.70  Aligned_cols=45  Identities=20%  Similarity=0.270  Sum_probs=40.5

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            356778899999999999999999999999999999999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.09  E-value=6.7e-11  Score=72.45  Aligned_cols=44  Identities=16%  Similarity=0.291  Sum_probs=40.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.6e-11  Score=72.18  Aligned_cols=44  Identities=18%  Similarity=0.340  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|++|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-11  Score=75.70  Aligned_cols=41  Identities=32%  Similarity=0.563  Sum_probs=26.8

Q ss_pred             HHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       255 ~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      +++|++++||.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34566666666666666666666666666666666666664

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7e-11  Score=72.34  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=39.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.08  E-value=6.2e-11  Score=72.60  Aligned_cols=45  Identities=16%  Similarity=0.190  Sum_probs=40.4

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            356778889999999999999999999999999999999999877

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.08  E-value=9.7e-11  Score=79.26  Aligned_cols=57  Identities=28%  Similarity=0.451  Sum_probs=51.9

Q ss_pred             cCCCCcccccc--cccccCCHHHHHHHHHHcCCCCcccccc--ccccccCHHHHHHHHHhc
Q psy13793        175 FSSGTRYQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCEI--CFRIFKTEINLTRHLECH  231 (337)
Q Consensus       175 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  231 (337)
                      ....++|.|..  |++.|.....|..|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567899998  9999999999999999999999999965  999999999999998765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=7e-11  Score=71.60  Aligned_cols=44  Identities=23%  Similarity=0.292  Sum_probs=39.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35678888999999999999999999999999999999999877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.1e-11  Score=71.81  Aligned_cols=44  Identities=23%  Similarity=0.321  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=8.6e-11  Score=74.71  Aligned_cols=48  Identities=23%  Similarity=0.472  Sum_probs=42.9

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHH-HcCCCCccccccccccccC
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQ-AHKPKGKHTCEICFRIFKT  220 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  220 (337)
                      ..++++++|.|+.|++.|.....|..|++ +|++++||.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            34567789999999999999999999997 8999999999999999975

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.07  E-value=6.5e-11  Score=72.48  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.9e-11  Score=72.08  Aligned_cols=44  Identities=14%  Similarity=0.175  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.5e-11  Score=72.22  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.2e-11  Score=72.02  Aligned_cols=45  Identities=16%  Similarity=0.167  Sum_probs=40.1

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356778889999999999999999999999999999999999877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.2e-11  Score=71.79  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=39.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=7.5e-11  Score=72.23  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=40.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.5e-11  Score=71.95  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.9e-11  Score=72.12  Aligned_cols=44  Identities=20%  Similarity=0.298  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.8e-11  Score=71.68  Aligned_cols=44  Identities=18%  Similarity=0.236  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999887

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.07  E-value=1.3e-11  Score=78.58  Aligned_cols=51  Identities=20%  Similarity=0.247  Sum_probs=46.3

Q ss_pred             chhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        270 EKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       270 ~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      ++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+ ++|+++++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHH-HHhccCCCC
Confidence            357888888999999999999999999999999999999995 899998763

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.4e-11  Score=71.96  Aligned_cols=45  Identities=18%  Similarity=0.169  Sum_probs=40.5

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356778889999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.6e-11  Score=72.46  Aligned_cols=44  Identities=18%  Similarity=0.210  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.3e-11  Score=71.79  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46778899999999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.8e-11  Score=72.13  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=39.7

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.3e-11  Score=72.29  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=9.3e-11  Score=71.78  Aligned_cols=45  Identities=16%  Similarity=0.076  Sum_probs=40.8

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356788899999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.6e-11  Score=71.92  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.8e-11  Score=74.90  Aligned_cols=43  Identities=28%  Similarity=0.467  Sum_probs=38.7

Q ss_pred             HHHhCCCCCcccc--ccchhccCHHHHHHHHHhccCCCCeecCCC
Q psy13793        255 MISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPYKCPFC  297 (337)
Q Consensus       255 ~~~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  297 (337)
                      .++|++++||.|.  .|++.|.+.+.|..|+++|++++||+|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3568889999998  899999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.06  E-value=7.3e-11  Score=72.27  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=39.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.3e-11  Score=72.01  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=39.7

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.06  E-value=6.2e-11  Score=71.49  Aligned_cols=40  Identities=20%  Similarity=0.284  Sum_probs=34.8

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      .|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4778889999999999999999999999999999998864

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-10  Score=71.53  Aligned_cols=44  Identities=20%  Similarity=0.294  Sum_probs=39.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-11  Score=75.98  Aligned_cols=42  Identities=26%  Similarity=0.399  Sum_probs=30.5

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecC
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCP  295 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  295 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555677777777777777777777777777777777777774

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.7e-11  Score=71.70  Aligned_cols=44  Identities=14%  Similarity=0.222  Sum_probs=39.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46778888999999999999999999999999999999999877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7e-11  Score=72.34  Aligned_cols=44  Identities=20%  Similarity=0.345  Sum_probs=39.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=8.9e-11  Score=71.86  Aligned_cols=44  Identities=20%  Similarity=0.160  Sum_probs=39.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9e-11  Score=71.85  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=40.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.8e-11  Score=71.90  Aligned_cols=44  Identities=23%  Similarity=0.276  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=71.49  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=71.39  Aligned_cols=44  Identities=18%  Similarity=0.250  Sum_probs=40.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      ++++|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46778899999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.9e-11  Score=72.12  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999877

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.6e-11  Score=72.90  Aligned_cols=41  Identities=29%  Similarity=0.382  Sum_probs=22.0

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            33445555555555555555555555555555555555544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-11  Score=74.66  Aligned_cols=41  Identities=27%  Similarity=0.344  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       254 H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45566667777777777777777777777777777777766

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=71.60  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1e-10  Score=71.64  Aligned_cols=44  Identities=23%  Similarity=0.262  Sum_probs=39.5

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|++|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46778888999999999999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.04  E-value=1e-10  Score=71.59  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.4e-11  Score=72.89  Aligned_cols=41  Identities=34%  Similarity=0.515  Sum_probs=34.0

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      +.|++++||.|.+|++.|.+.+.|..|+++|++++||.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45778888888888888888888888888888888888863

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=71.47  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=71.61  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=40.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46678889999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=71.50  Aligned_cols=44  Identities=18%  Similarity=0.312  Sum_probs=39.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46678888999999999999999999999999999999999877

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.4e-11  Score=73.41  Aligned_cols=41  Identities=32%  Similarity=0.583  Sum_probs=33.5

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      +.|++++||.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35778888888888888888888888888888888888863

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.2e-11  Score=72.57  Aligned_cols=45  Identities=20%  Similarity=0.280  Sum_probs=40.5

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356778899999999999999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=71.14  Aligned_cols=45  Identities=20%  Similarity=0.291  Sum_probs=39.7

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356778889999999999999999999999999999999999765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=71.28  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      ++++|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.8e-11  Score=72.14  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.1e-10  Score=70.52  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHH-HcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQ-AHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  214 (337)
                      |+++|+++++|.|+.|++.|.....|..|++ +|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4677888999999999999999999999999 9999999999877

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.4e-10  Score=69.08  Aligned_cols=38  Identities=32%  Similarity=0.606  Sum_probs=27.5

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      .|++++||.|.+|++.|.+.+.|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46667777777777777777777777777777777766

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.4e-10  Score=69.93  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=39.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999865

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.7e-11  Score=83.73  Aligned_cols=68  Identities=22%  Similarity=0.276  Sum_probs=60.0

Q ss_pred             HHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        250 TLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       250 ~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      .|..|+..|.+++|+.|..|++.| ..+.|..|+ .|.+++||.|+.|++.|. ...|..|+ ++|++++..
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~-~~c~~~~~~   71 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHP-EVCGREGSG   71 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHH-HHBTTBSSS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHH-HHccCCcCC
Confidence            456788889999999999999999 499999999 899999999999999987 58899995 889987543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=4.5e-10  Score=73.13  Aligned_cols=43  Identities=23%  Similarity=0.355  Sum_probs=31.8

Q ss_pred             ccCCCCeecCC--CccccCCchHHHHHHHhhCCCCCCCCCCcccC
Q psy13793        286 HTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGETLPDISLDEM  328 (337)
Q Consensus       286 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~~~~  328 (337)
                      ++|++||+|.+  |+++|.+.++|.+|++++|++++++...+..+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~   66 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEE   66 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccccc
Confidence            46788888865  88888888888888667888887776655433

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=2.6e-10  Score=69.35  Aligned_cols=43  Identities=19%  Similarity=0.368  Sum_probs=39.2

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccccc
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICF  215 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  215 (337)
                      ..|+++++|.|+.|++.|.....|..|+++|+++++|.|..||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3577889999999999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=69.76  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=39.7

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      +.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5678889999999999999999999999999999999999887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=2.7e-10  Score=70.40  Aligned_cols=43  Identities=16%  Similarity=0.222  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccc
Q psy13793        174 MFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFR  216 (337)
Q Consensus       174 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  216 (337)
                      .+.++++|.|++|++.|.....|..|+++|++++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3456788999999999999999999999999999999999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.95  E-value=4.8e-10  Score=68.55  Aligned_cols=43  Identities=16%  Similarity=0.294  Sum_probs=38.5

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.3e-10  Score=68.32  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=38.8

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            35677888999999999999999999999999999999999864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.5e-10  Score=68.23  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=39.2

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            35677889999999999999999999999999999999999863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.7e-10  Score=68.15  Aligned_cols=44  Identities=25%  Similarity=0.348  Sum_probs=39.0

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35677888999999999999999999999999999999999864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=69.73  Aligned_cols=43  Identities=19%  Similarity=0.265  Sum_probs=39.6

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5678889999999999999999999999999999999999887

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.93  E-value=6.4e-10  Score=66.47  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=36.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            356788889999999999999999999999999999999884

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.9e-10  Score=68.11  Aligned_cols=43  Identities=21%  Similarity=0.315  Sum_probs=38.4

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.9e-10  Score=68.10  Aligned_cols=43  Identities=23%  Similarity=0.314  Sum_probs=38.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4677888999999999999999999999999999999999863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.7e-10  Score=68.17  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=38.9

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35677888999999999999999999999999999999999863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.7e-10  Score=67.83  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=38.8

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35677888999999999999999999999999999999999863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.1e-10  Score=67.74  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=38.4

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888899999999999999999999999999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.2e-10  Score=68.02  Aligned_cols=43  Identities=21%  Similarity=0.312  Sum_probs=38.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=9.5e-10  Score=65.66  Aligned_cols=41  Identities=20%  Similarity=0.378  Sum_probs=36.4

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      +.+|+++++|.|+.|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56788889999999999999999999999999999999883

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.3e-10  Score=67.67  Aligned_cols=43  Identities=19%  Similarity=0.388  Sum_probs=38.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4677888999999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.6e-10  Score=67.59  Aligned_cols=43  Identities=21%  Similarity=0.331  Sum_probs=38.5

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.4e-10  Score=67.65  Aligned_cols=43  Identities=19%  Similarity=0.349  Sum_probs=38.4

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=1.3e-10  Score=76.11  Aligned_cols=52  Identities=12%  Similarity=0.371  Sum_probs=44.9

Q ss_pred             cccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHH
Q psy13793        169 SYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEIN  223 (337)
Q Consensus       169 ~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  223 (337)
                      ..|+.+|+++++|.|+.|++.|.....|.   ++|++++||.|..||+.|....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            44677889999999999999999988886   78999999999999999976554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.4e-10  Score=67.67  Aligned_cols=43  Identities=21%  Similarity=0.348  Sum_probs=38.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.1e-10  Score=66.48  Aligned_cols=42  Identities=29%  Similarity=0.449  Sum_probs=37.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            567788899999999999999999999999999999999884

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.3e-10  Score=66.93  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=38.3

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3567788899999999999999999999999999999999884

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.5e-10  Score=67.89  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5677888999999999999999999999999999999999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.9e-10  Score=67.09  Aligned_cols=42  Identities=19%  Similarity=0.309  Sum_probs=38.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            467788899999999999999999999999999999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=8.9e-10  Score=67.30  Aligned_cols=43  Identities=23%  Similarity=0.348  Sum_probs=38.7

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3567788899999999999999999999999999999999986

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=9.4e-10  Score=65.69  Aligned_cols=41  Identities=20%  Similarity=0.386  Sum_probs=37.3

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTC  211 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  211 (337)
                      |..+|+++++|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            46678889999999999999999999999999999999987

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.9e-10  Score=67.52  Aligned_cols=42  Identities=19%  Similarity=0.384  Sum_probs=38.1

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788899999999999999999999999999999999986

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.9e-10  Score=67.51  Aligned_cols=43  Identities=21%  Similarity=0.312  Sum_probs=38.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.2e-10  Score=67.24  Aligned_cols=43  Identities=16%  Similarity=0.263  Sum_probs=38.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4677888999999999999999999999999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.6e-10  Score=66.86  Aligned_cols=43  Identities=19%  Similarity=0.331  Sum_probs=38.2

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      .|+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567888999999999999999999999999999999999884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.1e-10  Score=67.75  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=38.5

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      ++.+|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4677888999999999999999999999999999999999863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=8.3e-10  Score=67.41  Aligned_cols=43  Identities=21%  Similarity=0.346  Sum_probs=38.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.2e-10  Score=67.02  Aligned_cols=41  Identities=29%  Similarity=0.557  Sum_probs=37.5

Q ss_pred             HHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCC
Q psy13793        281 FHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPD  322 (337)
Q Consensus       281 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~  322 (337)
                      .|+++|++++||.|++|++.|.+.+.|..|+ ++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHH-hHhcCCCCCC
Confidence            3788999999999999999999999999995 8999998764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=66.90  Aligned_cols=42  Identities=21%  Similarity=0.365  Sum_probs=37.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788899999999999999999999999999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.1e-10  Score=67.45  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4677888899999999999999999999999999999999863

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=4.6e-11  Score=84.09  Aligned_cols=70  Identities=17%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             HHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCCcccCC
Q psy13793        255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLDEMS  329 (337)
Q Consensus       255 ~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~  329 (337)
                      ..+|++++||.|.+|++.|.+.+.|..|+++|++++||.|..|.    ....|..| .+.|.+...+...+...|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~   86 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSK-QKYADGAFADFKQESGPS   86 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCC-CCCCCCSSSCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhh-hcccccccccccccCCCC
Confidence            34688999999999999999999999999999999999998765    45567778 588998776666555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.3e-09  Score=65.81  Aligned_cols=42  Identities=14%  Similarity=0.371  Sum_probs=37.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            467788899999999999999999999999999999999884

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.87  E-value=1e-09  Score=64.42  Aligned_cols=37  Identities=27%  Similarity=0.476  Sum_probs=22.1

Q ss_pred             hCCCCCccccccchhccCHHHHHHHHHhccCCCCeec
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKC  294 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  294 (337)
                      |++++||.|.+|++.|.+.+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.2e-09  Score=66.78  Aligned_cols=42  Identities=17%  Similarity=0.383  Sum_probs=38.0

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      ++.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            356788899999999999999999999999999999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.3e-09  Score=65.84  Aligned_cols=42  Identities=21%  Similarity=0.456  Sum_probs=37.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            467788899999999999999999999999999999999884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.1e-10  Score=65.99  Aligned_cols=41  Identities=22%  Similarity=0.463  Sum_probs=36.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTC  211 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  211 (337)
                      |+.+|+++++|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            46678889999999999999999999999999999999887

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=65.32  Aligned_cols=41  Identities=20%  Similarity=0.490  Sum_probs=36.6

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTC  211 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  211 (337)
                      |..+|+++++|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45678888999999999999999999999999999999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=66.78  Aligned_cols=43  Identities=14%  Similarity=0.237  Sum_probs=38.2

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCC-CCcccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKP-KGKHTCEI  213 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  213 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46778889999999999999999999999999999 99999863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.7e-09  Score=65.29  Aligned_cols=42  Identities=19%  Similarity=0.240  Sum_probs=37.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      ++.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            356788889999999999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.6e-10  Score=65.87  Aligned_cols=41  Identities=20%  Similarity=0.434  Sum_probs=36.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTC  211 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  211 (337)
                      |+.+|+++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45678889999999999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.9e-09  Score=65.82  Aligned_cols=42  Identities=17%  Similarity=0.155  Sum_probs=38.2

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      +.+|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567888999999999999999999999999999999999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=66.95  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=37.9

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788899999999999999999999999999999999986

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=2.2e-09  Score=64.47  Aligned_cols=41  Identities=15%  Similarity=0.278  Sum_probs=36.7

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      ..|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            35778899999999999999999999999999999999863

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=2e-09  Score=70.12  Aligned_cols=39  Identities=31%  Similarity=0.473  Sum_probs=34.8

Q ss_pred             hCCCCCccccc--cchhccCHHHHHHHH-HhccCCCCeecCC
Q psy13793        258 HSTERPHNCPH--CEKTFKRNQDLKFHL-NQHTGERPYKCPF  296 (337)
Q Consensus       258 h~~~k~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~~  296 (337)
                      .+++|||+|..  |+++|.+.+.|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            57899999975  999999999999997 6899999999965

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.1e-09  Score=66.19  Aligned_cols=43  Identities=14%  Similarity=0.231  Sum_probs=39.1

Q ss_pred             ccccCCCCccccc--ccccccCCHHHHHHHHHHcCCCCccccccc
Q psy13793        172 NAMFSSGTRYQCP--LCNKKINTKSNLRRHLQAHKPKGKHTCEIC  214 (337)
Q Consensus       172 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  214 (337)
                      .++|+++++|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5678888999998  899999999999999999999999999887

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2e-09  Score=65.37  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=37.7

Q ss_pred             ccccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccccc
Q psy13793        172 NAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEI  213 (337)
Q Consensus       172 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  213 (337)
                      ..+|+++++|.|+.|++.|.....|..|+++|++++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456788899999999999999999999999999999999863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.81  E-value=1.4e-09  Score=62.93  Aligned_cols=36  Identities=33%  Similarity=0.624  Sum_probs=26.7

Q ss_pred             HHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       282 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |+++|++++||.|++|++.|.+.+.|..|+ ++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHH-HHhccC
Confidence            566777777777877887777777777774 667653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.9e-09  Score=63.16  Aligned_cols=39  Identities=26%  Similarity=0.417  Sum_probs=35.3

Q ss_pred             cccCCCCcccccccccccCCHHHHHHHHHHcCCCCcccc
Q psy13793        173 AMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTC  211 (337)
Q Consensus       173 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  211 (337)
                      .+|+++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            457788999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.6e-09  Score=65.39  Aligned_cols=42  Identities=21%  Similarity=0.380  Sum_probs=37.8

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467788899999999999999999999999999999999883

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=66.11  Aligned_cols=42  Identities=17%  Similarity=0.324  Sum_probs=37.4

Q ss_pred             cccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        171 NNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       171 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+.+|+++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999999999885

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.2e-09  Score=62.04  Aligned_cols=35  Identities=26%  Similarity=0.573  Sum_probs=23.6

Q ss_pred             HhccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        284 NQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       284 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      ++|++++||.|++|++.|.+.+.|..|+ ++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHI-KTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHH-HHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHH-HHHcCCC
Confidence            3566677777777777777777777774 6666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.9e-09  Score=62.39  Aligned_cols=36  Identities=33%  Similarity=0.592  Sum_probs=32.9

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      ++|++++||.|.+|++.|.+.+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            358899999999999999999999999999999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=5.2e-09  Score=59.54  Aligned_cols=33  Identities=33%  Similarity=0.555  Sum_probs=22.5

Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      |+++++|.|++|++.|.+.+.|..|+ ++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHI-REVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHH-HHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHH-HHHcCCC
Confidence            56667777777777777777777774 5666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.1e-09  Score=61.48  Aligned_cols=35  Identities=14%  Similarity=0.208  Sum_probs=25.7

Q ss_pred             HhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        284 NQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       284 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ++|++++||+|+.|++.|.+++.|..|++++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            45777778888888888888888888844677654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.72  E-value=8.1e-09  Score=58.71  Aligned_cols=35  Identities=23%  Similarity=0.375  Sum_probs=32.6

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      +|++++||.|.+|++.|.+.+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            37889999999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.72  E-value=7e-09  Score=58.28  Aligned_cols=32  Identities=28%  Similarity=0.510  Sum_probs=19.5

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCCee
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERPYK  293 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  293 (337)
                      +||.|.+|++.|.+.+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35666666666666666666666666666553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.72  E-value=8.3e-09  Score=59.54  Aligned_cols=35  Identities=31%  Similarity=0.480  Sum_probs=32.8

Q ss_pred             eeecccCCCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         67 YDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        67 h~~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      |+++|++++||.|++|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            67889999999999999999999999999999865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.72  E-value=6e-09  Score=59.33  Aligned_cols=33  Identities=30%  Similarity=0.820  Sum_probs=23.0

Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      |++++||.|++|++.|.+.+.|..|+ ++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHH-HHcCCCC
Confidence            56677777777777777777777774 6676654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.70  E-value=1e-08  Score=58.34  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=32.6

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      +|++++||.|.+|++.|.+.+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37899999999999999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.70  E-value=8.6e-09  Score=63.49  Aligned_cols=38  Identities=18%  Similarity=0.435  Sum_probs=28.3

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPD  322 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~  322 (337)
                      +|++++||.|.+|++.|.+...|..|++++|+++....
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~~   38 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE   38 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCCC
Confidence            57889999999999999999999999644898887664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.1e-08  Score=59.30  Aligned_cols=32  Identities=19%  Similarity=0.312  Sum_probs=19.3

Q ss_pred             ccCCCCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        286 HTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       286 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +++++||+|++  |++.|.+++.|.+|+ ++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            45566666654  666666666666663 566554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-08  Score=59.23  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=30.4

Q ss_pred             HhCCCCCccccc--cchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .+++++||.|..  |+++|.+.+.|.+|+++|+++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367899999986  9999999999999999999863

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=7.1e-09  Score=70.51  Aligned_cols=64  Identities=17%  Similarity=0.146  Sum_probs=53.8

Q ss_pred             ccccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCCc
Q psy13793        168 LSYNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDTV  234 (337)
Q Consensus       168 ~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  234 (337)
                      |..|+..+.+.+++.|..|++.|. ...|..|+ .|.+++|+.|..|++.|. ...|..|++++.+.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            455677788889999999999994 89999998 888999999999999887 48888998887654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.62  E-value=2.2e-08  Score=58.52  Aligned_cols=38  Identities=16%  Similarity=0.426  Sum_probs=32.3

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        175 FSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       175 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |+++++|.|+.|++.|...+.|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            45678899999999999999999999999999988763

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=1.6e-08  Score=58.76  Aligned_cols=34  Identities=24%  Similarity=0.577  Sum_probs=19.1

Q ss_pred             CCCCCcccc--ccchhccCHHHHHHHHHhccCCCCe
Q psy13793        259 STERPHNCP--HCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       259 ~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      ++++||.|.  .|++.|.+.+.|..|+++|+++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            455555555  3555555555555555555555554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.4e-08  Score=58.54  Aligned_cols=35  Identities=29%  Similarity=0.572  Sum_probs=27.1

Q ss_pred             HhccCCCCeecCCCccccCCc-hHHHHHHHhhCCCCC
Q psy13793        284 NQHTGERPYKCPFCPRTFASS-GNCFSHRKRMHEGET  319 (337)
Q Consensus       284 ~~H~~~~~~~C~~C~k~f~~~-~~L~~H~~~~H~~~~  319 (337)
                      ++|++++||.|++|++.|.+. +.|..|+ ++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHI-WAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHH-HHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHH-HhcCCCC
Confidence            357788888888888888888 8888884 7777653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.1e-08  Score=57.38  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=24.6

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      .|++++||.|++|++.|.+.+.|..|+ ++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHM-LVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHH-TTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHH-HHhcCCC
Confidence            466777777777777777777777774 6777653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.5e-08  Score=57.09  Aligned_cols=34  Identities=26%  Similarity=0.529  Sum_probs=24.3

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      .|++++||+|++|++.|.+.+.|..|+ ++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHM-NRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHH-HHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHH-HHhccCC
Confidence            467777777777777777777777774 6776653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.9e-08  Score=56.74  Aligned_cols=33  Identities=39%  Similarity=0.689  Sum_probs=23.0

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +|++++||.|++|++.|.....|..|+ ++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHL-RKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHH-HHccCC
Confidence            466677777777777777777777774 667665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.6e-08  Score=56.33  Aligned_cols=34  Identities=38%  Similarity=0.768  Sum_probs=30.9

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|.+++||.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4788999999999999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.1e-08  Score=56.64  Aligned_cols=34  Identities=29%  Similarity=0.431  Sum_probs=31.0

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|++++||.|.+|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4788999999999999999999999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.2e-08  Score=56.10  Aligned_cols=34  Identities=35%  Similarity=0.721  Sum_probs=31.0

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|.+++||.|.+|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4788999999999999999999999999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.4e-08  Score=56.94  Aligned_cols=34  Identities=18%  Similarity=0.350  Sum_probs=31.0

Q ss_pred             eecccCCCceecCCCCCcCCChhHHHhH-HhhccC
Q psy13793         68 DRRKNGPKPYQCAICPRGYYSDIGLQNH-LWSHRK  101 (337)
Q Consensus        68 ~~~h~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~~  101 (337)
                      +++|++++||.|+.|++.|.....|..| ++.|.+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            3578999999999999999999999999 888865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=4.2e-08  Score=56.05  Aligned_cols=33  Identities=24%  Similarity=0.559  Sum_probs=21.3

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      .|+++++|.|++|++.|.+...|..|+ ++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHK-LLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHH-HHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHH-HHhcCC
Confidence            356666666666666666666666663 566654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.53  E-value=2.6e-08  Score=56.85  Aligned_cols=26  Identities=19%  Similarity=0.291  Sum_probs=17.8

Q ss_pred             hCCCCCccccccchhccCHHHHHHHH
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHL  283 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~  283 (337)
                      +.+++||.|.+|+++|.+.+.|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34667777777777777777777776

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.9e-08  Score=55.42  Aligned_cols=34  Identities=38%  Similarity=0.561  Sum_probs=29.9

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|.+++||.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678899999999999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=2.1e-08  Score=57.79  Aligned_cols=34  Identities=38%  Similarity=0.703  Sum_probs=30.8

Q ss_pred             HhCCCCCccccccchhccCH-HHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRN-QDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~-~~L~~H~~~H~~~~  290 (337)
                      +|++++||.|.+|++.|.+. +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57889999999999999999 99999999998864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.2e-08  Score=55.35  Aligned_cols=32  Identities=22%  Similarity=0.581  Sum_probs=20.2

Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |.+++||.|++|++.|.....|..|+ ++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHL-RIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHH-HHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHH-HHhCCC
Confidence            45566666666666666666666663 566654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.8e-08  Score=55.19  Aligned_cols=34  Identities=38%  Similarity=0.637  Sum_probs=31.4

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|.+++||.|..|++.|.+...|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.48  E-value=5.4e-08  Score=59.80  Aligned_cols=35  Identities=26%  Similarity=0.634  Sum_probs=29.8

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHH-hccCCCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLN-QHTGERP  291 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~  291 (337)
                      +|++++||.|.+|++.|.+...|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 9998754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.44  E-value=8.5e-09  Score=57.47  Aligned_cols=30  Identities=27%  Similarity=0.482  Sum_probs=15.8

Q ss_pred             CccccccchhccCHHHHHHHHHhccCCCCe
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      ||.|.+|++.|.+.+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555555543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.43  E-value=2.3e-07  Score=51.82  Aligned_cols=33  Identities=18%  Similarity=0.488  Sum_probs=29.0

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhCCCCCccc
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHSTERPHNC  266 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C  266 (337)
                      ++|.|++|++.|...+.|..|+++|++++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            368899999999999999999999999998853

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.42  E-value=1.1e-07  Score=54.72  Aligned_cols=32  Identities=22%  Similarity=0.510  Sum_probs=18.5

Q ss_pred             ccCCCCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        286 HTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       286 H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |++++||.|.+  |++.|.+.+.|..|+ ++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHL-RWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHH-HHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            45556666653  666666666666663 555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.41  E-value=2.8e-08  Score=60.79  Aligned_cols=39  Identities=21%  Similarity=0.321  Sum_probs=31.2

Q ss_pred             HHHHHhccCCCCeecC--CCccccCCchHHHHHHHhhCCCCC
Q psy13793        280 KFHLNQHTGERPYKCP--FCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       280 ~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      ..|...|++++||.|+  .|++.|...+.|..|+ ++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~-~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHH-HHccCCC
Confidence            3455678889999995  6999999999999995 7888764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=4.3e-08  Score=68.76  Aligned_cols=60  Identities=22%  Similarity=0.345  Sum_probs=48.0

Q ss_pred             ccccccCCCCcccccccccccCCHHHHHHHHHHcCCCCccccccccccccCHHHHHHHHHhcCC
Q psy13793        170 YNNAMFSSGTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECHDT  233 (337)
Q Consensus       170 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  233 (337)
                      .+..+|+++++|.|+.|++.|.....|..|+++|++++||.|..|..    ...|..|++.|.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            33567889999999999999999999999999999999999987654    3344445555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.40  E-value=1.2e-07  Score=54.64  Aligned_cols=34  Identities=35%  Similarity=0.707  Sum_probs=31.0

Q ss_pred             HhCCCCCccccc--cchhccCHHHHHHHHHhccCCC
Q psy13793        257 SHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       257 ~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|++++||.|.+  |++.|.+.+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999995  9999999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=2e-07  Score=50.59  Aligned_cols=30  Identities=27%  Similarity=0.737  Sum_probs=23.4

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      +||.|+.|++.|.+.+.|..|++++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478888888888888888888557887763

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=2.8e-07  Score=60.42  Aligned_cols=31  Identities=26%  Similarity=0.359  Sum_probs=15.5

Q ss_pred             CCCCCccccccchhccCHHHHHHHHHhccCC
Q psy13793        259 STERPHNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       259 ~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      .+++||.|.+|++.|.+.+.|..|+++|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3445555555555555555555555555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=1.8e-07  Score=54.12  Aligned_cols=34  Identities=21%  Similarity=0.487  Sum_probs=30.9

Q ss_pred             ccCCCCeecC--CCccccCCchHHHHHHHhhCCCCCC
Q psy13793        286 HTGERPYKCP--FCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       286 H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      |++++||.|.  .|++.|.+.+.|.+|+ ++|+++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHH-HHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHH-HHhCCCCC
Confidence            6789999999  5999999999999995 89998875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.5e-07  Score=50.04  Aligned_cols=28  Identities=29%  Similarity=0.867  Sum_probs=17.3

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|+.|++.|.....|..|+ ++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL-ETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            4666666666666666666663 556554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.32  E-value=3.4e-07  Score=49.14  Aligned_cols=27  Identities=33%  Similarity=0.667  Sum_probs=13.0

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|++|++.|.+.+.|..|+ ++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHH-HHhcCC
Confidence            445555555555555555552 444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=3.2e-07  Score=49.29  Aligned_cols=28  Identities=32%  Similarity=0.694  Sum_probs=19.8

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|+.|++.|...+.|..|+ ++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcCC
Confidence            4677777777777777777774 667665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=4.4e-07  Score=49.04  Aligned_cols=30  Identities=23%  Similarity=0.569  Sum_probs=27.8

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            479999999999999999999999999864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.30  E-value=2.3e-07  Score=49.90  Aligned_cols=29  Identities=31%  Similarity=0.732  Sum_probs=24.4

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|..|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57888888888888888888888888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=4.6e-07  Score=59.41  Aligned_cols=41  Identities=17%  Similarity=0.252  Sum_probs=33.5

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCCcc
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDISLD  326 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~~  326 (337)
                      .|.+++||.|.+|++.|.+.+.|..|+ ++|+++..+....+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~-r~Htg~~~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHE-AQHGVTSLQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHH-HHHTTTSCCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhh-hhhCCCcccccccc
Confidence            367889999999999999999999995 88998876555433

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=3.4e-07  Score=49.09  Aligned_cols=27  Identities=48%  Similarity=0.915  Sum_probs=13.3

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|++|++.|.....|..|+ ++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHL-RIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHH-HHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHH-HHhcCC
Confidence            455555555555555555552 444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=4e-07  Score=48.49  Aligned_cols=26  Identities=35%  Similarity=0.809  Sum_probs=15.9

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +||.|++|++.|.+.+.|..|+ ++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY-RVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-TTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HhcC
Confidence            4566666666666666666663 5554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=2.7e-08  Score=60.86  Aligned_cols=39  Identities=26%  Similarity=0.602  Sum_probs=33.5

Q ss_pred             HHHHHHhCCCCCcccc--ccchhccCHHHHHHHHHhccCCC
Q psy13793        252 RAHMISHSTERPHNCP--HCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       252 ~~H~~~h~~~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ..|+..|++++||.|.  .|++.|.+.+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445568999999995  79999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=4.5e-07  Score=50.05  Aligned_cols=28  Identities=29%  Similarity=0.784  Sum_probs=18.2

Q ss_pred             CCeecC--CCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCP--FCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|+  .|++.|.+.+.|..|+ ++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccCC
Confidence            566666  6666666666666663 666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.26  E-value=5e-07  Score=49.48  Aligned_cols=27  Identities=37%  Similarity=0.933  Sum_probs=15.3

Q ss_pred             CeecC--CCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCP--FCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|+  .||+.|...+.|..|+ ++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHK-RTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHH-TTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHH-HHhcCC
Confidence            55555  5666666655666663 555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=5e-07  Score=47.67  Aligned_cols=25  Identities=28%  Similarity=0.735  Sum_probs=14.0

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      +||.|+.||+.|.+.+.|..|+ ++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL-RTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHC
T ss_pred             cCccCCCcChhhCCHHHHHHHH-HHc
Confidence            4555555555555555555553 444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=4.1e-07  Score=48.11  Aligned_cols=25  Identities=36%  Similarity=0.768  Sum_probs=14.5

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      +||.|+.||+.|.+.+.|..|+ ++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM-RGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH-TTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHH-Hhc
Confidence            4566666666666666666663 444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=6.2e-07  Score=47.31  Aligned_cols=27  Identities=30%  Similarity=0.742  Sum_probs=24.8

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      ++||.|+.||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            469999999999999999999998873

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.24  E-value=4.5e-07  Score=49.01  Aligned_cols=27  Identities=26%  Similarity=0.555  Sum_probs=15.2

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +|.|++|++.|...+.|..|+ ++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHI-KTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHH-HHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHH-HHHccC
Confidence            455666666666666666663 445444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=4.7e-07  Score=51.51  Aligned_cols=25  Identities=24%  Similarity=0.478  Sum_probs=17.4

Q ss_pred             CCCCcccccccccccCCHHHHHHHH
Q psy13793        176 SSGTRYQCPLCNKKINTKSNLRRHL  200 (337)
Q Consensus       176 ~~~~~~~C~~C~~~f~~~~~l~~H~  200 (337)
                      .+++||.|+.|+++|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566677777777777777777776

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.23  E-value=5.8e-07  Score=48.17  Aligned_cols=29  Identities=38%  Similarity=0.762  Sum_probs=27.0

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|.+|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=50.80  Aligned_cols=27  Identities=33%  Similarity=0.835  Sum_probs=15.4

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|++|++.|...+.|..|+ ++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV-RQHTGE   28 (29)
Confidence            455666666666666666663 555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=8.3e-07  Score=47.18  Aligned_cols=28  Identities=36%  Similarity=0.739  Sum_probs=26.1

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      ++||.|.+|++.|.+.+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=1.1e-06  Score=48.48  Aligned_cols=30  Identities=40%  Similarity=0.780  Sum_probs=27.8

Q ss_pred             CCCcccc--ccchhccCHHHHHHHHHhccCCC
Q psy13793        261 ERPHNCP--HCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       261 ~k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ++||.|.  .|++.|.+.+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=50.84  Aligned_cols=28  Identities=46%  Similarity=0.961  Sum_probs=15.4

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|++|++.|.+.+.|..|+ ++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHV-RIHTGE   29 (30)
Confidence            4555555555555555555553 455543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=4.1e-07  Score=48.74  Aligned_cols=28  Identities=32%  Similarity=0.761  Sum_probs=16.5

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|+.|++.|.+.+.|..|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHL-KIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHH-HHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHH-HHhccC
Confidence            3566666666666666666663 555554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.18  E-value=9.8e-07  Score=48.25  Aligned_cols=29  Identities=45%  Similarity=0.888  Sum_probs=27.0

Q ss_pred             CCcccc--ccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCP--HCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|.  .|++.|.+.+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=6e-07  Score=48.09  Aligned_cols=29  Identities=41%  Similarity=0.830  Sum_probs=27.1

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.17  E-value=1e-07  Score=52.92  Aligned_cols=31  Identities=23%  Similarity=0.395  Sum_probs=27.9

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      +||.|++|++.|.+.+.|..|+ ++|+++++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHI-KTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSST-TSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHH-HHHccCCCC
Confidence            5899999999999999999995 899998753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.16  E-value=8.1e-07  Score=46.74  Aligned_cols=26  Identities=35%  Similarity=0.841  Sum_probs=15.2

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      ||.|++|++.|.+.+.|..|+ ++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~-~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQ-RVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHG-GGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHH-HHcCC
Confidence            456666666666666666663 55554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.5e-07  Score=49.78  Aligned_cols=29  Identities=41%  Similarity=0.843  Sum_probs=26.9

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|.+|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=7.2e-07  Score=47.71  Aligned_cols=29  Identities=41%  Similarity=0.934  Sum_probs=27.0

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|..|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=1e-06  Score=46.52  Aligned_cols=27  Identities=22%  Similarity=0.568  Sum_probs=25.2

Q ss_pred             CCCccccccchhccCHHHHHHHHHhcc
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      ++||.|.+|++.|.+.+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.8e-07  Score=49.91  Aligned_cols=30  Identities=37%  Similarity=0.763  Sum_probs=27.5

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ++||.|..|++.|.+.+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.14  E-value=1.4e-06  Score=46.96  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=27.7

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      +||.|.+|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=1.5e-06  Score=45.71  Aligned_cols=27  Identities=26%  Similarity=0.550  Sum_probs=24.1

Q ss_pred             CccccccchhccCHHHHHHHHHhccCC
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      ||.|.+|++.|.+.+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=1e-06  Score=47.60  Aligned_cols=29  Identities=28%  Similarity=0.552  Sum_probs=22.7

Q ss_pred             CCccccccchhccCHHHHHHH-HHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFH-LNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H-~~~H~~~~  290 (337)
                      +||.|..|++.|.+.+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478888888888888888888 57787753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.6e-07  Score=47.00  Aligned_cols=20  Identities=35%  Similarity=0.793  Sum_probs=10.7

Q ss_pred             CeecCCCccccCCchHHHHH
Q psy13793        291 PYKCPFCPRTFASSGNCFSH  310 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H  310 (337)
                      ||.|++||+.|.+.+.|..|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H   21 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANH   21 (26)
Confidence            45555555555555555555

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.1e-07  Score=46.58  Aligned_cols=25  Identities=36%  Similarity=0.804  Sum_probs=23.5

Q ss_pred             CceecCCCCCcCCChhHHHhHHhhc
Q psy13793         75 KPYQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        75 ~~~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      +||.|+.||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899999999999999999999887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.92  E-value=5e-06  Score=44.30  Aligned_cols=25  Identities=28%  Similarity=0.660  Sum_probs=13.4

Q ss_pred             CeecC--CCccccCCchHHHHHHHhhCC
Q psy13793        291 PYKCP--FCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       291 ~~~C~--~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +|.|+  .|++.|...+.|..|+ ++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            45555  5555555555555553 4454

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.77  E-value=1.3e-05  Score=42.53  Aligned_cols=27  Identities=30%  Similarity=0.592  Sum_probs=25.2

Q ss_pred             CCcccc--ccchhccCHHHHHHHHHhccC
Q psy13793        262 RPHNCP--HCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       262 k~~~C~--~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      +||.|.  .|++.|.+.+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999975

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.62  E-value=8.6e-05  Score=48.18  Aligned_cols=47  Identities=23%  Similarity=0.388  Sum_probs=26.2

Q ss_pred             cchhccCHHHHHHHHH-hccCCC------CeecC--CCccccCCchHHHHHHHhhC
Q psy13793        269 CEKTFKRNQDLKFHLN-QHTGER------PYKCP--FCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       269 C~~~f~~~~~L~~H~~-~H~~~~------~~~C~--~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            5555555555555552 454443      56664  56666666666666664443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.00021  Score=46.30  Aligned_cols=51  Identities=20%  Similarity=0.480  Sum_probs=37.4

Q ss_pred             ccccc--cccccCCHHHHHHHH-HHcCCCC------ccccc--cccccccCHHHHHHHHHhc
Q psy13793        181 YQCPL--CNKKINTKSNLRRHL-QAHKPKG------KHTCE--ICFRIFKTEINLTRHLECH  231 (337)
Q Consensus       181 ~~C~~--C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  231 (337)
                      +.|.+  |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            34554  889999999999998 4787665      67775  6777777777777777653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.83  E-value=5.1e-05  Score=55.62  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=17.9

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHH
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      .|+|++||.|..|++.|.+.+.|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            3556666666666666666666666655

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.61  E-value=0.0019  Score=48.06  Aligned_cols=75  Identities=27%  Similarity=0.342  Sum_probs=49.2

Q ss_pred             ccccCCccCCCCCCHHHHHHHH--HHhCCC-CCcccccc------chhccCHHHHHHHHHhccCCCCeecCCCccccCCc
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHM--ISHSTE-RPHNCPHC------EKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASS  304 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-k~~~C~~C------~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~  304 (337)
                      .++.|.+|...|.+...+..|.  +.|... +.|.+..+      ++.+....    +...+.+.+.|-|.+|.+.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4578999999999999888888  455321 22332110      11221110    11234567789999999999999


Q ss_pred             hHHHHHHH
Q psy13793        305 GNCFSHRK  312 (337)
Q Consensus       305 ~~L~~H~~  312 (337)
                      ..|..|+.
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.47  E-value=0.00061  Score=49.93  Aligned_cols=33  Identities=24%  Similarity=0.495  Sum_probs=29.0

Q ss_pred             eeecccCCCceecCCCCCcCCChhHHHhHHhhc
Q psy13793         67 YDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        67 h~~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      +...|+|++||.|..|++.|.+...|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345688999999999999999999999998653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.32  E-value=0.012  Score=46.27  Aligned_cols=103  Identities=17%  Similarity=0.349  Sum_probs=71.0

Q ss_pred             ccccccccccCH-----HHHHHHHHhcCCccccC--CccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHH
Q psy13793        210 TCEICFRIFKTE-----INLTRHLECHDTVELSC--PDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       210 ~C~~C~~~f~~~-----~~l~~H~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H  282 (337)
                      .|..|...+...     ..+.+-+.   .....|  ..|+..+. ...+..|. ..-.-.+..|+.|+..+ ....|..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~---~l~v~C~n~GC~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H  128 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL---SLMVKCPNEGCLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIH  128 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH---TSEEECCSTTCCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh---hcccCCCCCCCCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHH
Confidence            788888776543     12222221   244567  46777654 45677786 34455678899999887 56779999


Q ss_pred             HHhccCCCCeecCCCccccCCchHHHHHHHhhCCCCCC
Q psy13793        283 LNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGETL  320 (337)
Q Consensus       283 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  320 (337)
                      ....-..+...|++|+..|... .|..| ..+++|+..
T Consensus       129 ~~~~C~~r~~~C~~C~~~~~~~-~l~~H-~~~~~~~~~  164 (170)
T 3hcs_A          129 ILKDCPRRQVSCDNCAASMAFE-DKEIH-DQNCPLALE  164 (170)
T ss_dssp             HHHTCTTCEEECTTTCCEEEGG-GHHHH-HTTCCC---
T ss_pred             hhhhCCCCCeECCCCCCccCHH-HHHhH-HHhCcChhh
Confidence            9877788899999999988665 68999 589988754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.86  E-value=0.0082  Score=44.61  Aligned_cols=74  Identities=19%  Similarity=0.364  Sum_probs=50.4

Q ss_pred             CccccccccccccCHHHHHHHH--HhcCC--ccccCCc------cCCCCCCHHHHHHHHHHhCCCCCccccccchhccCH
Q psy13793        207 GKHTCEICFRIFKTEINLTRHL--ECHDT--VELSCPD------CNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRN  276 (337)
Q Consensus       207 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~--~~~~C~~------C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~  276 (337)
                      +++.|.+|...|.+...+..|.  +.|..  +.+.+..      =++.+....    +...+.+...|.|.+|+..|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            6789999999999999999998  44432  1121110      012222110    11234567789999999999999


Q ss_pred             HHHHHHHH
Q psy13793        277 QDLKFHLN  284 (337)
Q Consensus       277 ~~L~~H~~  284 (337)
                      ..|..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999986

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.67  E-value=0.0018  Score=51.03  Aligned_cols=104  Identities=18%  Similarity=0.404  Sum_probs=72.8

Q ss_pred             cccccccccCCHH-----HHHHHHHHcCCCCcccc--ccccccccCHHHHHHHHHhcCCccccCCccCCCCCCHHHHHHH
Q psy13793        182 QCPLCNKKINTKS-----NLRRHLQAHKPKGKHTC--EICFRIFKTEINLTRHLECHDTVELSCPDCNRVYPTNSTLRAH  254 (337)
Q Consensus       182 ~C~~C~~~f~~~~-----~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H  254 (337)
                      .|+.|...+....     .+..-+.    .....|  .-|+..+. ...+..|+..-.-.+..|+.|+..+ .+..|..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H  128 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIH  128 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHH
Confidence            6999987766531     1222111    234567  46877665 4567888865555678899999987 57789999


Q ss_pred             HHHhCCCCCccccccchhccCHHHHHHHHHhccCCCCe
Q psy13793        255 MISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGERPY  292 (337)
Q Consensus       255 ~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  292 (337)
                      ....-..++-.|..|+..+.. ..|..|..++.|+.++
T Consensus       129 ~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          129 ILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             hhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            988888888999999987755 6689999999988764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.26  E-value=0.016  Score=31.73  Aligned_cols=28  Identities=25%  Similarity=0.695  Sum_probs=22.3

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      .|.|++|-+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4788888888888888888888888643

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.96  E-value=0.017  Score=33.84  Aligned_cols=24  Identities=17%  Similarity=0.339  Sum_probs=22.2

Q ss_pred             CceecCCCCCcCCChhHHHhHHhh
Q psy13793         75 KPYQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        75 ~~~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            579999999999999999999963

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.62  E-value=0.035  Score=32.50  Aligned_cols=25  Identities=32%  Similarity=0.598  Sum_probs=21.2

Q ss_pred             CcccccccccccCCHHHHHHHHHHc
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQAH  203 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~h  203 (337)
                      .+|.|+.|+..|.....|+.||+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5688999999999999999998843

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.81  E-value=0.14  Score=26.94  Aligned_cols=24  Identities=25%  Similarity=0.749  Sum_probs=19.9

Q ss_pred             ecCCCccccCCchHHHHHHHhhCC
Q psy13793        293 KCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       293 ~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      -|.+|.+.|+.-.+|..|++..|-
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            488888888888888888888774

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.45  E-value=0.11  Score=28.36  Aligned_cols=24  Identities=21%  Similarity=0.279  Sum_probs=21.5

Q ss_pred             ceecCCCCCcCCChhHHHhHHhhc
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      .|.|++|.+.|.+...|..|....
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            599999999999999999997543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.97  E-value=0.19  Score=33.22  Aligned_cols=29  Identities=28%  Similarity=0.549  Sum_probs=22.3

Q ss_pred             CCeecCCCccccC-------CchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFA-------SSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~-------~~~~L~~H~~~~H~~~  318 (337)
                      ..-.|.+|++.+.       .-+.|.+|+++.|..|
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e   62 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREE   62 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHH
Confidence            3567888988887       2468999999988643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.88  E-value=0.59  Score=25.58  Aligned_cols=24  Identities=17%  Similarity=0.358  Sum_probs=17.6

Q ss_pred             CCCccccccchhccCHHHHHHHHH
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      ..++.|..|+-+|++...+..|++
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            345677778878887777777765

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=85.38  E-value=0.088  Score=34.56  Aligned_cols=14  Identities=36%  Similarity=0.980  Sum_probs=11.7

Q ss_pred             CeecCCCccccCCc
Q psy13793        291 PYKCPFCPRTFASS  304 (337)
Q Consensus       291 ~~~C~~C~k~f~~~  304 (337)
                      .|+|+.||..|.-+
T Consensus        51 ~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           51 VFKCPVCGEEFYGK   64 (95)
T ss_dssp             EEECTTTCCEEETT
T ss_pred             hhcCCCccHHHhcc
Confidence            59999999998654

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=85.15  E-value=0.44  Score=26.90  Aligned_cols=27  Identities=15%  Similarity=0.185  Sum_probs=21.8

Q ss_pred             CCCceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         73 GPKPYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        73 ~~~~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      ....|.|+.||..|.. ..+..|...|.
T Consensus         6 ~~~~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            6 AEDQVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             CCCEEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             cCCCcccccccCcCCc-ccccchhhHHH
Confidence            3457899999999987 66789988873

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=83.26  E-value=1.7  Score=23.81  Aligned_cols=24  Identities=21%  Similarity=0.333  Sum_probs=18.1

Q ss_pred             CcccccccccccCCHHHHHHHHHH
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQA  202 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~  202 (337)
                      ..+.|..|+.+|.....+..|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            446688888888888888888664

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.64  E-value=0.62  Score=30.72  Aligned_cols=39  Identities=18%  Similarity=0.451  Sum_probs=30.9

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCCccccccccccccC
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKT  220 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  220 (337)
                      |.|..|+.++. +..|..|+..-.+...|.|-.|+..|..
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            88999997765 5677888877666567899999999975

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=81.19  E-value=1.2  Score=34.24  Aligned_cols=31  Identities=35%  Similarity=0.567  Sum_probs=17.7

Q ss_pred             eecCCCccccCCchHHHHHHHhhCCCCCCCCCCc
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMHEGETLPDISL  325 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~  325 (337)
                      |+|..||| +....+|.+|+ +.| |+++..-++
T Consensus       155 YKCe~CgK-YvDId~~~~Hl-k~H-g~~v~e~~e  185 (226)
T 2czr_A          155 YKCEECGK-YVDIENLEAHL-REH-GIKLHEKSE  185 (226)
T ss_dssp             EECTTTCC-EEEGGGHHHHH-HTT-TCCGGGCSE
T ss_pred             EehhhcCc-eecHHHHHHHH-HHc-Ccchhhcch
Confidence            67777776 34556677775 555 334444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	337
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2dlqa3	30	g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3	0.003
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 9e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 259 STERPHNCPHCEKTFKRNQDLKFHLNQ-HTGERPYKC 294
           S  +P+ C  C K F R   L  H+ Q HT ERP+KC
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 9e-05
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 287 TGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           +  +PY C  C + F+   +   H K++H  E
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (103), Expect = 5e-07
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 265 NCPHCEKTFKRNQDLKFHLNQHTGERPYKCPF 296
             P C K+F   + LK H+  H+  R Y C F
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           H+GE+PY+C  C   F  SG    H  + H   
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
           HS E+P+ C  C   F ++  +K H+ Q   E
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           H+GE+PY C  C + F+ S     H +R+H GE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQH-QRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
           HS E+P+ C  C K F R+  L  H   HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
                   R + C  C K+F  + DL  H   HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
              Q    R YKC  C ++F+ S +   H +R H GE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGE 38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRK 312
           ++ + C  C K+F        H++ H G RPY C  C + F    +   H K
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 15/47 (31%), Positives = 19/47 (40%)

Query: 240 DCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH 286
            C + +   S    HM  H   RP+ C  C K FK    L  H+  H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 181 YQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRIFKTEINLTRHLECH 231
           Y C  C K    KS   RH+  H     + C +C + FK + +L  H++ H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 6e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
           HTGE+PY C  C +TF        H  + +   
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
           H+ E+P+ C HC+KTF++ Q L  H  ++   
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.8 bits (86), Expect = 9e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
           R   C  C + F R + LK H   HT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH 315
                TG +P++CP C R+F+ S +   H ++ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 254 HMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTG 288
                +  +P  CP C+++F R+  L  H  +H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
            S +RP  C  C   F    +   HL  HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE 318
            +G+RP+ C  C   F +  NC  H  ++H   
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARH-LKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 5e-04
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 261 ERPHNCPHCEKTFKRNQDLKFHLNQHTG 288
           ++P  C  C + F R+  L  H+  HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER 290
           +   CP C K F R+  L  H+  H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (74), Expect = 0.003
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 260 TERPHNCPHCEKTFKRNQDLKFHLNQHTGE 289
           +E+   C  C++TF+R  +L+ H+  HTGE
Sbjct: 1   SEQVFTCSVCQETFRRRMELRLHMVSHTGE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 261 ERPHNCPH--CEKTFKRNQDLKFHLNQHTGE 289
           +RP++C H  C+K F RN DL  H   H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 262 RPHNCPH--CEKTFKRNQDLKFHLNQHTGE 289
           +PH C    C K++ R ++LK HL  HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	337
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.58
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.33
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.18
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.09
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.0
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.96
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.85
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.82
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.35
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.33
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.33
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.3
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.08
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.06
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.96
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.89
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.8
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.78
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.77
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.75
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.72
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.71
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.69
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.53
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.51
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.43
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.3
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.19
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.16
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.15
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.12
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.09
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.08
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.97
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.93
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.92
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.87
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.76
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.72
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.63
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.58
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.44
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.33
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.31
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.28
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.83
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.32
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.16
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.86
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.17
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.97
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.89
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.7
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.4
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.35
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.16
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.05
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.4
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.77
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.31
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.0
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.85
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.78
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	89.67
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.29
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.69
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.56
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.47
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.09
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.82
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.31
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.23
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.08
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	85.98
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	85.96
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.66
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.46

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=8.2e-18  Score=105.18  Aligned_cols=53  Identities=28%  Similarity=0.691  Sum_probs=49.9

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccCCCCeecCCCccccCCchHHHHHHHhhC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      ||||.|. ||++|.+...|..|+++|+|++||.|++||+.|.+.+.|..|+ ++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~-r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHH-hcC
Confidence            6899994 9999999999999999999999999999999999999999995 776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3.8e-16  Score=97.43  Aligned_cols=53  Identities=30%  Similarity=0.547  Sum_probs=49.7

Q ss_pred             CccccCCccCCCCCCHHHHHHHHHHhCCCCCccccccchhccCHHHHHHHHHhc
Q psy13793        233 TVELSCPDCNRVYPTNSTLRAHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      +++|.|. ||+.|.....|..|+++|+|++||.|.+|+++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4688994 9999999999999999999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.6e-14  Score=79.86  Aligned_cols=37  Identities=35%  Similarity=0.601  Sum_probs=29.3

Q ss_pred             HHHHhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        281 FHLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       281 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +|+++|++++||.|++|||+|.+.++|..| +++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H-~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHH-HTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHh-CccCCCC
Confidence            467778888888888888888888888888 4788875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.4e-13  Score=76.94  Aligned_cols=37  Identities=41%  Similarity=0.770  Sum_probs=31.0

Q ss_pred             CCCCccccccchhccCHHHHHHHHH-hccCCCCeecCC
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHLN-QHTGERPYKCPF  296 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~  296 (337)
                      -+|||.|.+||++|.+.+.|.+|++ +|+|++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3688888888888888888888875 688888888864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.9e-13  Score=73.50  Aligned_cols=33  Identities=42%  Similarity=0.890  Sum_probs=22.7

Q ss_pred             hccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        285 QHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       285 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +|+|++||+|.+||++|.+.++|..| +++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H-~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHH-HHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhh-ccccCCC
Confidence            46677777777777777777777777 4677665

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.7e-13  Score=74.67  Aligned_cols=35  Identities=34%  Similarity=0.718  Sum_probs=30.5

Q ss_pred             HhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        284 NQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       284 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |+|+|++||+|++|++.|+++++|.+|+++.|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            57899999999999999999999999987888754

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.2e-13  Score=72.52  Aligned_cols=33  Identities=45%  Similarity=0.734  Sum_probs=31.7

Q ss_pred             HhCCCCCccccccchhccCHHHHHHHHHhccCC
Q psy13793        257 SHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       257 ~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      +|+|+|||+|.+|+++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.1e-13  Score=78.54  Aligned_cols=37  Identities=32%  Similarity=0.568  Sum_probs=34.9

Q ss_pred             HHHHHhCCCCCccccccchhccCHHHHHHHHHhccCC
Q psy13793        253 AHMISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       253 ~H~~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      +|+++|+++|||.|.+||++|.+.+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778899999999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.4e-12  Score=71.26  Aligned_cols=34  Identities=32%  Similarity=0.602  Sum_probs=25.1

Q ss_pred             HhccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        284 NQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       284 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |+|+|++||+|.+||++|.+++.|..|+ ++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhC-cccCCC
Confidence            4677777777777777777777777774 667654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.8e-12  Score=72.99  Aligned_cols=35  Identities=34%  Similarity=0.660  Sum_probs=27.4

Q ss_pred             HHHhccCCCCeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        282 HLNQHTGERPYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       282 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      |.|+|+|++||+|++|++.|+++++|..|+ ++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~-r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHH-hcCcC
Confidence            567788888888888888888888888884 77764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=4.8e-12  Score=71.17  Aligned_cols=35  Identities=31%  Similarity=0.480  Sum_probs=32.9

Q ss_pred             eeecccCCCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         67 YDRRKNGPKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        67 h~~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      |.|+|+|++||+|++|++.|...+.|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999854

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.5e-12  Score=71.22  Aligned_cols=35  Identities=34%  Similarity=0.754  Sum_probs=32.6

Q ss_pred             HHhCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        256 ISHSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       256 ~~h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      ++|+|+|||+|.+|+++|.+.+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            47999999999999999999999999999998763

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.1e-11  Score=70.07  Aligned_cols=37  Identities=24%  Similarity=0.479  Sum_probs=34.0

Q ss_pred             CCCCeecCCCccccCCchHHHHHHHhhCCCCCCCCCC
Q psy13793        288 GERPYKCPFCPRTFASSGNCFSHRKRMHEGETLPDIS  324 (337)
Q Consensus       288 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~  324 (337)
                      .++||+|.+||+.|.+.++|.+|++++|+||++....
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999988899999998654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=7e-12  Score=68.94  Aligned_cols=32  Identities=31%  Similarity=0.859  Sum_probs=23.7

Q ss_pred             ccCCCCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        286 HTGERPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       286 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |+|++||+|++|++.|+++++|.+|+ ++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHc-cccCCc
Confidence            57777777777777777777777774 677654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.3e-11  Score=67.79  Aligned_cols=33  Identities=30%  Similarity=0.507  Sum_probs=31.0

Q ss_pred             hCCCCCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        258 HSTERPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       258 h~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      |+|+|||.|.+|++.|.+.+.|.+|+++|++..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999998763

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=1.5e-11  Score=64.73  Aligned_cols=29  Identities=34%  Similarity=0.676  Sum_probs=16.2

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      +||+|++|++.|++.+.|.+|+ ++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCCC
Confidence            3555555555555555555553 5555553

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=1.6e-11  Score=64.60  Aligned_cols=29  Identities=38%  Similarity=0.762  Sum_probs=28.0

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      |||.|++|+++|.+.+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.3e-11  Score=64.03  Aligned_cols=28  Identities=36%  Similarity=0.878  Sum_probs=15.0

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      ||||+|.+|+++|.+.+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3555555555555555555555555544

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.9e-11  Score=64.18  Aligned_cols=29  Identities=28%  Similarity=0.737  Sum_probs=17.1

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      +||.|++||+.|.+++.|.+|+ ++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCCcC
Confidence            3566666666666666666663 5666553

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.7e-11  Score=63.03  Aligned_cols=29  Identities=31%  Similarity=0.786  Sum_probs=27.9

Q ss_pred             CCccccccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      |||.|.+|+++|.+.+.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.9e-11  Score=66.29  Aligned_cols=32  Identities=28%  Similarity=0.671  Sum_probs=29.3

Q ss_pred             ecccCCCceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         69 RRKNGPKPYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        69 ~~h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      |+|+|++||.|++|++.|....+|..|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            57999999999999999999999999986544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=3.4e-11  Score=62.45  Aligned_cols=28  Identities=36%  Similarity=0.879  Sum_probs=26.3

Q ss_pred             CCCeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        289 ERPYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       289 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      |+||+|++|++.|.+++.|.+|+ ++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             CcCccCCCCcCEecccccccccC-CCccC
Confidence            68999999999999999999995 99986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6.5e-11  Score=65.58  Aligned_cols=33  Identities=39%  Similarity=0.903  Sum_probs=26.9

Q ss_pred             ccccc--cchhccCHHHHHHHHHhccCCCCeecCC
Q psy13793        264 HNCPH--CEKTFKRNQDLKFHLNQHTGERPYKCPF  296 (337)
Q Consensus       264 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~  296 (337)
                      |.|+.  |+++|.+.+.|.+|+++|+|++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            66765  8888888888888888888888888864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=2.1e-11  Score=72.18  Aligned_cols=39  Identities=23%  Similarity=0.485  Sum_probs=31.2

Q ss_pred             HHHHHHhccCCCCeecCC--CccccCCchHHHHHHHhhCCCCC
Q psy13793        279 LKFHLNQHTGERPYKCPF--CPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       279 L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      |..|+. |+|++||+|++  |++.|..+++|..|+ ++|+|||
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~-r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHH-HHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhc-ccccCCC
Confidence            445654 88888888877  888888888888884 8888875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=9.3e-11  Score=59.12  Aligned_cols=25  Identities=36%  Similarity=0.944  Sum_probs=12.7

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      +||+|.+|||+|.+++.|..| +++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~H-qriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINH-QRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHH-HHHH
T ss_pred             CCccCCCCcCeeccCcccccC-ccCC
Confidence            355555555555555555555 3444

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.4e-10  Score=58.48  Aligned_cols=26  Identities=38%  Similarity=0.715  Sum_probs=25.0

Q ss_pred             CCccccccchhccCHHHHHHHHHhcc
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      |||+|.+||++|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=3.5e-11  Score=71.21  Aligned_cols=40  Identities=25%  Similarity=0.616  Sum_probs=35.3

Q ss_pred             HHHHHHHHhCCCCCccccc--cchhccCHHHHHHHHHhccCCC
Q psy13793        250 TLRAHMISHSTERPHNCPH--CEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       250 ~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      .|..|+ .|++++||.|..  |+++|.+.+.|..|+++|+|++
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            455666 499999999977  9999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=8.5e-10  Score=58.05  Aligned_cols=28  Identities=39%  Similarity=0.851  Sum_probs=15.1

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      |||+|++  |++.|++.+.|.+|+ ++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcCC
Confidence            3555555  555555555555553 555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.1e-09  Score=57.69  Aligned_cols=28  Identities=50%  Similarity=1.073  Sum_probs=26.8

Q ss_pred             CCccccc--cchhccCHHHHHHHHHhccCC
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      |||.|+.  |+++|.+.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999988  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=8.8e-10  Score=58.13  Aligned_cols=27  Identities=37%  Similarity=0.907  Sum_probs=13.1

Q ss_pred             CeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|++  |+++|++.+.|.+|+ ++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~-r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHH-HHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccc-cccCCC
Confidence            455544  555555555555553 445443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.7e-09  Score=57.48  Aligned_cols=29  Identities=38%  Similarity=0.923  Sum_probs=15.3

Q ss_pred             CCeecC--CCccccCCchHHHHHHHhhCCCCC
Q psy13793        290 RPYKCP--FCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       290 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      +||.|+  .|++.|++.++|.+|+ ++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-CcccccC
Confidence            355553  2555555555555553 5555553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.1e-09  Score=57.16  Aligned_cols=29  Identities=45%  Similarity=0.888  Sum_probs=27.0

Q ss_pred             CCcccc--ccchhccCHHHHHHHHHhccCCC
Q psy13793        262 RPHNCP--HCEKTFKRNQDLKFHLNQHTGER  290 (337)
Q Consensus       262 k~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  290 (337)
                      +||.|+  .|+++|.+.+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699995  69999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.4e-09  Score=57.35  Aligned_cols=28  Identities=36%  Similarity=0.848  Sum_probs=26.6

Q ss_pred             CCccccc--cchhccCHHHHHHHHHhccCC
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      |||.|+.  |+++|.+.+.|.+|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.6e-09  Score=59.84  Aligned_cols=32  Identities=34%  Similarity=0.806  Sum_probs=30.1

Q ss_pred             ccccc--cccccCCHHHHHHHHHHcCCCCccccc
Q psy13793        181 YQCPL--CNKKINTKSNLRRHLQAHKPKGKHTCE  212 (337)
Q Consensus       181 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  212 (337)
                      |.|++  |+++|...+.|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            77887  999999999999999999999999996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=7.8e-09  Score=53.77  Aligned_cols=27  Identities=48%  Similarity=1.069  Sum_probs=13.3

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhCCC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      |||+|++  |++.|++.+.|.+| +++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H-~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRH-IRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHH-THHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhh-cCccCC
Confidence            3455544  55555555555555 245543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=2.4e-08  Score=53.22  Aligned_cols=28  Identities=32%  Similarity=0.869  Sum_probs=17.8

Q ss_pred             CCCeecCC--CccccCCchHHHHHHHhhCCC
Q psy13793        289 ERPYKCPF--CPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       289 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      |+||.|++  |++.|+..++|.+| .++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H-~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRH-KKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHH-HGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHH-hhhccC
Confidence            45666666  66666666666666 366654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=5.1e-08  Score=51.89  Aligned_cols=29  Identities=45%  Similarity=0.898  Sum_probs=26.9

Q ss_pred             CCCccccc--cchhccCHHHHHHHHHhccCC
Q psy13793        261 ERPHNCPH--CEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       261 ~k~~~C~~--C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      |+||.|..  |+++|.+.+.|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=1.8e-08  Score=52.35  Aligned_cols=27  Identities=48%  Similarity=1.036  Sum_probs=25.5

Q ss_pred             CCccccc--cchhccCHHHHHHHHHhccC
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  288 (337)
                      |||.|..  |+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999977  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.3e-07  Score=44.85  Aligned_cols=26  Identities=23%  Similarity=0.625  Sum_probs=24.1

Q ss_pred             ceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      |++|+.|++.|+....|..||+.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999864

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.3e-07  Score=44.89  Aligned_cols=24  Identities=29%  Similarity=0.609  Sum_probs=11.0

Q ss_pred             eecCCCccccCCchHHHHHHHhhCC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      ++|++|++.|+.+..|..|+ +.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hm-r~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHM-RCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHG-GGCC
T ss_pred             CccchhhhHhcchhHHHHHh-hccC
Confidence            34444444444444444442 4443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=1.7e-07  Score=46.05  Aligned_cols=27  Identities=30%  Similarity=0.560  Sum_probs=25.1

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      ++||.|++||+.|+......+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999883

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1e-07  Score=48.85  Aligned_cols=26  Identities=27%  Similarity=0.851  Sum_probs=24.4

Q ss_pred             CceecCC--CCCcCCChhHHHhHHhhcc
Q psy13793         75 KPYQCAI--CPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        75 ~~~~C~~--C~~~F~~~~~L~~H~~~H~  100 (337)
                      +||.|+.  ||+.|...++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5999998  9999999999999999984

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=9e-08  Score=49.04  Aligned_cols=26  Identities=54%  Similarity=0.981  Sum_probs=16.4

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhCC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +||.|++  |||.|+..++|.+|+ ++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~-r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHI-LTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHH-HHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHH-hhcc
Confidence            4666666  666666666666663 5553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=4.4e-07  Score=44.56  Aligned_cols=25  Identities=32%  Similarity=0.736  Sum_probs=12.1

Q ss_pred             CCccccccchhccCHHHHHHHHHhc
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      |||.|.+||+.|..+....+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4444444444444444444444444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=6.8e-07  Score=43.49  Aligned_cols=28  Identities=39%  Similarity=0.800  Sum_probs=18.8

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      ++||+|..|.+.-...+.|..|+|.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566677776666666667777666665

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.5e-07  Score=45.45  Aligned_cols=26  Identities=38%  Similarity=0.752  Sum_probs=10.2

Q ss_pred             ccccchhccCHHHHHHHHHhccCCCC
Q psy13793        266 CPHCEKTFKRNQDLKFHLNQHTGERP  291 (337)
Q Consensus       266 C~~C~~~f~~~~~L~~H~~~H~~~~~  291 (337)
                      |.+||+.|.....|.+|.-.|+|++|
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            33333333333333333333333333

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.4e-06  Score=42.18  Aligned_cols=27  Identities=30%  Similarity=0.545  Sum_probs=18.6

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      .+.|..|||.|...+.|.+| +.+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh-~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRH-QLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHH-GGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHH-hhcccCC
Confidence            35677777777777777777 4777764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.9e-06  Score=42.33  Aligned_cols=30  Identities=33%  Similarity=0.593  Sum_probs=26.1

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGET  319 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  319 (337)
                      +||+|.+|.......++|..|++..|+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            589999999988899999999999998764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.2e-06  Score=43.59  Aligned_cols=28  Identities=39%  Similarity=0.991  Sum_probs=17.6

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccC
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      +|||.|++|...|.....+..|.|.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.96  E-value=2.4e-06  Score=42.97  Aligned_cols=28  Identities=32%  Similarity=0.857  Sum_probs=24.6

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ||.|.+|++.|+.+.-|.+|.+..|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7889999999999999999988888874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=4e-06  Score=42.71  Aligned_cols=31  Identities=26%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGETLP  321 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~  321 (337)
                      +...|+.|||.|...-.|.+| +..|+||+|.
T Consensus         4 k~~~ce~cgk~frdvyhlnrh-klshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRH-KLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHH-GGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhh-hcccCCCCCC
Confidence            567899999999999999999 6999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=3.2e-06  Score=40.88  Aligned_cols=26  Identities=46%  Similarity=0.774  Sum_probs=19.7

Q ss_pred             ccccccchhccCHHHHHHHHHhccCC
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      ..|.+||++|...+.|.+|.-+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777888888888888887777764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5.2e-06  Score=40.30  Aligned_cols=28  Identities=36%  Similarity=0.732  Sum_probs=26.1

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      ++||+|.+|...-+..+.|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4799999999999999999999999976

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=6.7e-06  Score=40.18  Aligned_cols=26  Identities=31%  Similarity=0.442  Sum_probs=12.2

Q ss_pred             ccccccchhccCHHHHHHHHHhccCC
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      |.|+.|+......+-|..|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            44444444444444444444444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6e-06  Score=41.10  Aligned_cols=26  Identities=27%  Similarity=0.786  Sum_probs=19.2

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  315 (337)
                      +||.|.+  |+|+|+..++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4777776  7788888888888876555

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6.4e-06  Score=41.00  Aligned_cols=27  Identities=26%  Similarity=0.621  Sum_probs=21.9

Q ss_pred             CCccccc--cchhccCHHHHHHHHHhccC
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  288 (337)
                      |||.|.+  |+++++..++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788866  88888888888888887654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.9e-06  Score=39.32  Aligned_cols=25  Identities=28%  Similarity=0.623  Sum_probs=12.8

Q ss_pred             CCccccccchhccCHHHHHHHHHhc
Q psy13793        262 RPHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       262 k~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      |||+|..|++.-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4455555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1e-05  Score=39.55  Aligned_cols=27  Identities=26%  Similarity=0.607  Sum_probs=24.7

Q ss_pred             ccccccccccCCHHHHHHHHHHcCCCC
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQAHKPKG  207 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  207 (337)
                      |.|++|+......+.|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=8.6e-06  Score=38.72  Aligned_cols=24  Identities=50%  Similarity=0.913  Sum_probs=12.0

Q ss_pred             ccccchhccCHHHHHHHHHhccCC
Q psy13793        266 CPHCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       266 C~~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      |+.|.+.|.+...|..|-|.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            444555555555555555555444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7.4e-06  Score=44.24  Aligned_cols=24  Identities=25%  Similarity=0.570  Sum_probs=13.2

Q ss_pred             CCCCccccccchhccCHHHHHHHH
Q psy13793        260 TERPHNCPHCEKTFKRNQDLKFHL  283 (337)
Q Consensus       260 ~~k~~~C~~C~~~f~~~~~L~~H~  283 (337)
                      |.|||.|.+|++.|.+..++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            445555555555555555555553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.2e-05  Score=39.95  Aligned_cols=28  Identities=25%  Similarity=0.743  Sum_probs=21.2

Q ss_pred             CcccccccccccCCHHHHHHHHHHcCCC
Q psy13793        179 TRYQCPLCNKKINTKSNLRRHLQAHKPK  206 (337)
Q Consensus       179 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  206 (337)
                      +||.|++|...|..+..+.-|.+.|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            5677888888888887777777777653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=43.58  Aligned_cols=25  Identities=32%  Similarity=0.777  Sum_probs=23.3

Q ss_pred             cCCCCeecCCCccccCCchHHHHHH
Q psy13793        287 TGERPYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       287 ~~~~~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      +|.+||.|..|+|.|.++.++.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            5789999999999999999999995

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.1e-05  Score=40.57  Aligned_cols=29  Identities=31%  Similarity=0.847  Sum_probs=24.1

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|++  |.|.|+..++-..|+.|.|+.|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5888888  9999999888888977888754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.3e-05  Score=39.26  Aligned_cols=27  Identities=33%  Similarity=0.741  Sum_probs=24.0

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +||+|.+|...-.++++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999999999999999999988885

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.53  E-value=2.4e-05  Score=36.52  Aligned_cols=23  Identities=39%  Similarity=0.911  Sum_probs=13.3

Q ss_pred             eecCCCccccCCchHHHHHHHhhC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |+|..|.+.|..++.|.+| +++|
T Consensus         1 ykcglcersfveksalsrh-qrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRH-QRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHH-GGGT
T ss_pred             CcccchHHHHHHHHHHHHH-HHhh
Confidence            4555666666666666666 3555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=4.7e-05  Score=36.55  Aligned_cols=28  Identities=36%  Similarity=0.650  Sum_probs=25.1

Q ss_pred             CCCeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        289 ERPYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       289 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      .+||+|..|...-...++|..|+ ++|+.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~-rihs~   28 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHL-RIHSD   28 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HHSCC
T ss_pred             CCCcccccccchhcchhhHhhhh-hcccC
Confidence            37999999999999999999995 99963

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=8.9e-05  Score=35.14  Aligned_cols=26  Identities=27%  Similarity=0.709  Sum_probs=23.7

Q ss_pred             cCCccCCCCCCHHHHHHHHHHhCCCC
Q psy13793        237 SCPDCNRVYPTNSTLRAHMISHSTER  262 (337)
Q Consensus       237 ~C~~C~~~f~~~~~l~~H~~~h~~~k  262 (337)
                      .|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.43  E-value=5.3e-05  Score=35.33  Aligned_cols=24  Identities=29%  Similarity=0.591  Sum_probs=22.7

Q ss_pred             ccccccchhccCHHHHHHHHHhcc
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHT  287 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~  287 (337)
                      |+|..|.++|...+.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00011  Score=35.68  Aligned_cols=28  Identities=21%  Similarity=0.604  Sum_probs=25.5

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      +.-|.|.+|...|..+..|+.||-.|++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4569999999999999999999999976

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00013  Score=35.50  Aligned_cols=23  Identities=39%  Similarity=0.925  Sum_probs=18.0

Q ss_pred             CeecCCCccccCCchHHHHHHHh
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKR  313 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~  313 (337)
                      ||.|..|...|..+++|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67788888888888888888753

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00013  Score=33.95  Aligned_cols=25  Identities=36%  Similarity=0.808  Sum_probs=17.2

Q ss_pred             CeecCCCccccCCchHHHHHHHhhC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      ||+|.-|...|.++.+|+.|+-..|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            6777777777777777777764443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.19  E-value=0.00013  Score=39.21  Aligned_cols=28  Identities=36%  Similarity=0.759  Sum_probs=15.8

Q ss_pred             CCeecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +.|.|.+|++.|.+...|-=|+ +.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCS
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcch
Confidence            3456666666666666666663 555443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=9.7e-05  Score=35.87  Aligned_cols=25  Identities=44%  Similarity=0.837  Sum_probs=16.3

Q ss_pred             CCccccc--cchhccCHHHHHHHHHhc
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~~~H  286 (337)
                      .||+|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566643  777777777777776665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.16  E-value=0.00014  Score=39.00  Aligned_cols=28  Identities=36%  Similarity=0.853  Sum_probs=25.4

Q ss_pred             CCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         74 PKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        74 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      .+.|.|.+|++.|.+..+|--||..|..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcc
Confidence            3579999999999999999999999965

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.15  E-value=0.00014  Score=33.95  Aligned_cols=24  Identities=42%  Similarity=0.920  Sum_probs=21.9

Q ss_pred             eecCCCccccCCchHHHHHHHhhC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H  315 (337)
                      |.|++|-+.|+.+.++..|++.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999988887

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.12  E-value=0.00012  Score=36.71  Aligned_cols=27  Identities=33%  Similarity=0.673  Sum_probs=23.4

Q ss_pred             CccccccchhccCHHHHHHHHH-hccCC
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLN-QHTGE  289 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~-~H~~~  289 (337)
                      ||.|.+|++.|.+...|.+|.. .|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7899999999999999999986 67663

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.09  E-value=0.00012  Score=35.66  Aligned_cols=28  Identities=32%  Similarity=0.683  Sum_probs=18.8

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      +||.|.+  |.|.|.+...|.+| ...|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrh-s~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRH-SLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHH-HHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhh-hccccCC
Confidence            4666655  77777777777777 3666664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=3.9e-05  Score=38.46  Aligned_cols=28  Identities=36%  Similarity=0.723  Sum_probs=23.8

Q ss_pred             CCccccc--cchhccCHHHHHHHH-HhccCC
Q psy13793        262 RPHNCPH--CEKTFKRNQDLKFHL-NQHTGE  289 (337)
Q Consensus       262 k~~~C~~--C~~~f~~~~~L~~H~-~~H~~~  289 (337)
                      |||.|..  |.++|...++-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899977  999999999999997 788754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.97  E-value=0.00019  Score=34.83  Aligned_cols=25  Identities=32%  Similarity=0.883  Sum_probs=22.0

Q ss_pred             CCeecCC--CccccCCchHHHHHHHhhC
Q psy13793        290 RPYKCPF--CPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       290 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  315 (337)
                      -||.|+.  |++.|...+-|.+| ..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrh-ekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRH-EKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHH-HHHH
T ss_pred             CCccCCccCccccccCHHHHhhh-hhcc
Confidence            4899987  99999999999999 4666

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00037  Score=34.07  Aligned_cols=26  Identities=27%  Similarity=0.523  Sum_probs=23.5

Q ss_pred             CceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         75 KPYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        75 ~~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      +||.|..|...-+..++|..|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998644

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.00034  Score=33.93  Aligned_cols=25  Identities=40%  Similarity=0.988  Sum_probs=11.9

Q ss_pred             ccccccchhccCHHHHHHHHHhccC
Q psy13793        264 HNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       264 ~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      |.|..|...|...-.|..|+..|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444444

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00032  Score=34.13  Aligned_cols=23  Identities=30%  Similarity=0.710  Sum_probs=21.7

Q ss_pred             ceecCCCCCcCCChhHHHhHHhh
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      ||.|..|...|....+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999975

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.76  E-value=0.00021  Score=34.85  Aligned_cols=28  Identities=43%  Similarity=0.738  Sum_probs=21.8

Q ss_pred             CCcccc--ccchhccCHHHHHHHHHhccCC
Q psy13793        262 RPHNCP--HCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       262 k~~~C~--~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      +||.|.  .|.+.|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            477774  4888888888888888888775

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00063  Score=32.54  Aligned_cols=26  Identities=23%  Similarity=0.607  Sum_probs=21.1

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      .|+|+.|+.....+++|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            47888888888888888888877774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.63  E-value=0.00064  Score=32.42  Aligned_cols=22  Identities=27%  Similarity=0.735  Sum_probs=20.4

Q ss_pred             ceecCCCCCcCCChhHHHhHHh
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLW   97 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~   97 (337)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999964

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0007  Score=35.90  Aligned_cols=26  Identities=31%  Similarity=0.839  Sum_probs=11.8

Q ss_pred             CCCccc--cccchhccCHHHHHHHHHhc
Q psy13793        261 ERPHNC--PHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       261 ~k~~~C--~~C~~~f~~~~~L~~H~~~H  286 (337)
                      +|||.|  +.|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            344444  23444444444444444443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.44  E-value=0.00078  Score=31.28  Aligned_cols=22  Identities=32%  Similarity=0.816  Sum_probs=20.0

Q ss_pred             CccccccchhccCHHHHHHHHH
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      ||+|..|...|.+..+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999974

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.0013  Score=31.27  Aligned_cols=23  Identities=30%  Similarity=0.853  Sum_probs=18.0

Q ss_pred             CeecCCCccccCCchHHHHHHHh
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKR  313 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~  313 (337)
                      ||+|..||+.|-.+.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            67888888888888888888543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0012  Score=31.70  Aligned_cols=24  Identities=25%  Similarity=0.652  Sum_probs=15.5

Q ss_pred             CccccccchhccCHHHHHHHHHhc
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      |-+|+.|.++..+...|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            445666666666666666666665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0016  Score=31.71  Aligned_cols=25  Identities=20%  Similarity=0.542  Sum_probs=22.5

Q ss_pred             CceecCCCCCcCCChhHHHhHHhhc
Q psy13793         75 KPYQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        75 ~~~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      +||+|+.|.....+.++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            4899999999999999999998653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0022  Score=33.93  Aligned_cols=28  Identities=25%  Similarity=0.527  Sum_probs=25.0

Q ss_pred             CCCceec--CCCCCcCCChhHHHhHHhhcc
Q psy13793         73 GPKPYQC--AICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        73 ~~~~~~C--~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      .++||.|  +=|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4899999  559999999999999998884

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0023  Score=32.63  Aligned_cols=26  Identities=23%  Similarity=0.517  Sum_probs=22.1

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      .|.|..|||.|+.+..+.+|- ..-+|
T Consensus         4 afvcskcgktftrrntm~rha-~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA-DNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH-HHCCC
T ss_pred             eeeecccccchhcchHHHHHh-hhcCC
Confidence            589999999999999999994 55554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0045  Score=34.43  Aligned_cols=24  Identities=33%  Similarity=0.544  Sum_probs=16.6

Q ss_pred             CccccccchhccCHHHHHHHHHhc
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H  286 (337)
                      -|.|..|++.|+....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            366777777777777777776665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0092  Score=33.14  Aligned_cols=26  Identities=31%  Similarity=0.593  Sum_probs=22.6

Q ss_pred             ccccCCccCCCCCCHHHHHHHHHHhC
Q psy13793        234 VELSCPDCNRVYPTNSTLRAHMISHS  259 (337)
Q Consensus       234 ~~~~C~~C~~~f~~~~~l~~H~~~h~  259 (337)
                      ..|.|..|++.|+....|++|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999988774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.012  Score=28.13  Aligned_cols=25  Identities=28%  Similarity=0.442  Sum_probs=22.9

Q ss_pred             ceecCCCCCcCCChhHHHhHHhhcc
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~H~  100 (337)
                      |-+|+.|.++..+...|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            6789999999999999999999883

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.016  Score=29.39  Aligned_cols=26  Identities=31%  Similarity=0.673  Sum_probs=19.8

Q ss_pred             CccccccchhccCHHHHHHHHHhccC
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLNQHTG  288 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~~H~~  288 (337)
                      .|.|..|++.|++...+.+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888766554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.97  E-value=0.018  Score=28.35  Aligned_cols=27  Identities=37%  Similarity=0.763  Sum_probs=15.3

Q ss_pred             Ccccc--ccchhccCHHHHHHHHHhccCC
Q psy13793        263 PHNCP--HCEKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       263 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  289 (337)
                      .|.|+  .|+..|+....|..|+..|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            34453  3666666666666666666553

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.019  Score=29.57  Aligned_cols=21  Identities=29%  Similarity=0.319  Sum_probs=15.7

Q ss_pred             cCCCCCCHHHHHHHHHHhCCC
Q psy13793        241 CNRVYPTNSTLRAHMISHSTE  261 (337)
Q Consensus       241 C~~~f~~~~~l~~H~~~h~~~  261 (337)
                      =++.|...+.|..|++.|+||
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345678888888888888775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.012  Score=30.34  Aligned_cols=20  Identities=40%  Similarity=0.622  Sum_probs=16.7

Q ss_pred             chhccCHHHHHHHHHhccCC
Q psy13793        270 EKTFKRNQDLKFHLNQHTGE  289 (337)
Q Consensus       270 ~~~f~~~~~L~~H~~~H~~~  289 (337)
                      ++.|.....|..|+|+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688889999999999886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.023  Score=27.00  Aligned_cols=23  Identities=22%  Similarity=0.401  Sum_probs=21.0

Q ss_pred             ceecCCCCCcCCChhHHHhHHhh
Q psy13793         76 PYQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        76 ~~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      .|.|+.|+.....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.40  E-value=0.028  Score=28.65  Aligned_cols=29  Identities=31%  Similarity=0.726  Sum_probs=18.9

Q ss_pred             CCCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        288 GERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       288 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      |+..|+|.+|.+.++..+++-+|.-..|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            34457777777777777777777655553

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.35  E-value=0.029  Score=25.95  Aligned_cols=22  Identities=36%  Similarity=0.921  Sum_probs=17.1

Q ss_pred             ccccccccccCCHHHHHHHHHH
Q psy13793        181 YQCPLCNKKINTKSNLRRHLQA  202 (337)
Q Consensus       181 ~~C~~C~~~f~~~~~l~~H~~~  202 (337)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888887764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.16  E-value=0.027  Score=28.26  Aligned_cols=23  Identities=22%  Similarity=0.385  Sum_probs=20.7

Q ss_pred             CceecCCCCCcCCChhHHHhHHh
Q psy13793         75 KPYQCAICPRGYYSDIGLQNHLW   97 (337)
Q Consensus        75 ~~~~C~~C~~~F~~~~~L~~H~~   97 (337)
                      ..|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35999999999999999999973

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.05  E-value=0.035  Score=27.83  Aligned_cols=21  Identities=24%  Similarity=0.494  Sum_probs=17.9

Q ss_pred             CeecCCCccccCCchHHHHHH
Q psy13793        291 PYKCPFCPRTFASSGNCFSHR  311 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~  311 (337)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            488999999999998888885

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.053  Score=25.87  Aligned_cols=20  Identities=20%  Similarity=0.531  Sum_probs=18.0

Q ss_pred             CCCCcCCChhHHHhHHhhcc
Q psy13793         81 ICPRGYYSDIGLQNHLWSHR  100 (337)
Q Consensus        81 ~C~~~F~~~~~L~~H~~~H~  100 (337)
                      -|++.|+..+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999998873

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.77  E-value=0.064  Score=26.33  Aligned_cols=27  Identities=37%  Similarity=0.730  Sum_probs=19.4

Q ss_pred             cccC--CccCCCCCCHHHHHHHHHHhCCC
Q psy13793        235 ELSC--PDCNRVYPTNSTLRAHMISHSTE  261 (337)
Q Consensus       235 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~  261 (337)
                      .|.|  +.|+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3455  46777788888888888777765

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=0.034  Score=34.19  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=22.5

Q ss_pred             CCCceecCCCCCcCCChhHHHhHHhh
Q psy13793         73 GPKPYQCAICPRGYYSDIGLQNHLWS   98 (337)
Q Consensus        73 ~~~~~~C~~C~~~F~~~~~L~~H~~~   98 (337)
                      |...|.|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44568999999999999999999853

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.00  E-value=0.053  Score=32.65  Aligned_cols=40  Identities=8%  Similarity=0.144  Sum_probs=29.5

Q ss_pred             ccCCCceecCCCCCcCCChhHHHhHHhhccCccccCcccce
Q psy13793         71 KNGPKPYQCAICPRGYYSDIGLQNHLWSHRKILKNSNVGIY  111 (337)
Q Consensus        71 h~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~c~~c~~~  111 (337)
                      .+....|.|+.|++.|.....+.. +..-.+.+.|..|+-.
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~L-~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQL-FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHH-EETTTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHHh-cCcCCCeEEecCCCCE
Confidence            344567999999999988777765 4445677888888643

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.85  E-value=0.32  Score=23.32  Aligned_cols=17  Identities=35%  Similarity=0.956  Sum_probs=6.4

Q ss_pred             ccccchhccCHHHHHHH
Q psy13793        266 CPHCEKTFKRNQDLKFH  282 (337)
Q Consensus       266 C~~C~~~f~~~~~L~~H  282 (337)
                      |..|++.+.+...++.|
T Consensus         5 c~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           5 CHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CSSSCCCCSSHHHHHHH
T ss_pred             chhHHHHHhhccCceEE
Confidence            33333333333333333

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.15  Score=24.47  Aligned_cols=27  Identities=19%  Similarity=0.360  Sum_probs=23.7

Q ss_pred             CeecCCCccccCCchHHHHHHHhhCCC
Q psy13793        291 PYKCPFCPRTFASSGNCFSHRKRMHEG  317 (337)
Q Consensus       291 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  317 (337)
                      .|.|..|||...+...+.-|+...|..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            488999999999999999998877753

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.67  E-value=0.32  Score=27.35  Aligned_cols=30  Identities=30%  Similarity=0.673  Sum_probs=25.1

Q ss_pred             CCCeecCC--CccccCCchHHHHHHHhhCCCC
Q psy13793        289 ERPYKCPF--CPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       289 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      -+||.|-.  |.-.|+-..+|.-|.+.+|...
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s~   49 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD   49 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhhc
Confidence            46888855  8889999999999999999765

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.29  E-value=0.12  Score=26.22  Aligned_cols=27  Identities=26%  Similarity=0.602  Sum_probs=23.6

Q ss_pred             CCCceecCCCCCcCCChhHHHhHHhhc
Q psy13793         73 GPKPYQCAICPRGYYSDIGLQNHLWSH   99 (337)
Q Consensus        73 ~~~~~~C~~C~~~F~~~~~L~~H~~~H   99 (337)
                      |+..|.|.+|.+.+...+++-+|..+-
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            566899999999999999999997543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.69  E-value=0.21  Score=23.87  Aligned_cols=19  Identities=32%  Similarity=0.539  Sum_probs=11.5

Q ss_pred             CccccCCchHHHHHHHhhC
Q psy13793        297 CPRTFASSGNCFSHRKRMH  315 (337)
Q Consensus       297 C~k~f~~~~~L~~H~~~~H  315 (337)
                      ||+-|+++..|..|.+-.|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            6666666666666655444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.56  E-value=0.0095  Score=36.78  Aligned_cols=22  Identities=32%  Similarity=0.692  Sum_probs=14.7

Q ss_pred             CccccccchhccCHHHHHHHHH
Q psy13793        263 PHNCPHCEKTFKRNQDLKFHLN  284 (337)
Q Consensus       263 ~~~C~~C~~~f~~~~~L~~H~~  284 (337)
                      .|-|..|++.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4667777777777777766654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.47  E-value=0.22  Score=23.85  Aligned_cols=26  Identities=27%  Similarity=0.571  Sum_probs=20.2

Q ss_pred             CeecC--CCccccCCchHHHHHHHhhCC
Q psy13793        291 PYKCP--FCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       291 ~~~C~--~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      .|.|.  .|.-.|+.+.++..|..+.|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            46664  488889999998888877774

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.09  E-value=0.27  Score=26.99  Aligned_cols=28  Identities=32%  Similarity=0.505  Sum_probs=16.9

Q ss_pred             CCCeecCCCccccCCchHHHHHHHhhCC
Q psy13793        289 ERPYKCPFCPRTFASSGNCFSHRKRMHE  316 (337)
Q Consensus       289 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  316 (337)
                      +.|-.|++|+-...+..+|.+|+...|.
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            3455666666666666666666655554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.82  E-value=0.12  Score=31.05  Aligned_cols=37  Identities=16%  Similarity=0.520  Sum_probs=25.7

Q ss_pred             CCcccccccccccCCHHHHHHHHHHcCCCCcccccccccc
Q psy13793        178 GTRYQCPLCNKKINTKSNLRRHLQAHKPKGKHTCEICFRI  217 (337)
Q Consensus       178 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  217 (337)
                      ...|.|+.|+++|.....+..   .-.....|.|..|+..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            356999999999976666543   3333456888888754

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.31  E-value=0.08  Score=28.20  Aligned_cols=26  Identities=35%  Similarity=0.752  Sum_probs=19.0

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccCCCCeecCCCcc
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR  299 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k  299 (337)
                      .+.|.|.+||..             +.|+.|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i-------------~~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYT-------------AVDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCE-------------EESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCE-------------ecCCCCCcCCCCCC
Confidence            355889999853             35677888999984

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.23  E-value=0.15  Score=23.87  Aligned_cols=18  Identities=44%  Similarity=0.833  Sum_probs=10.1

Q ss_pred             cchhccCHHHHHHHHHhc
Q psy13793        269 CEKTFKRNQDLKFHLNQH  286 (337)
Q Consensus       269 C~~~f~~~~~L~~H~~~H  286 (337)
                      |++.|.....|..|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555544

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.08  E-value=0.35  Score=26.52  Aligned_cols=25  Identities=32%  Similarity=0.804  Sum_probs=15.8

Q ss_pred             CCCccccccchhccCHHHHHHHHHh
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQ  285 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~  285 (337)
                      +.|-.|++|+....+..+|.+|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            4556666666666666666666653

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=85.96  E-value=0.11  Score=27.38  Aligned_cols=26  Identities=46%  Similarity=0.940  Sum_probs=19.0

Q ss_pred             CCCccccccchhccCHHHHHHHHHhccCCCCeecCCCcc
Q psy13793        261 ERPHNCPHCEKTFKRNQDLKFHLNQHTGERPYKCPFCPR  299 (337)
Q Consensus       261 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~k  299 (337)
                      ++.|.|.+||.             +|.|+.|=.|++|+.
T Consensus         3 ~~~~vC~vCGy-------------i~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGY-------------IHKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCC-------------EEESSCCSBCTTTCC
T ss_pred             CCEEECCCCCC-------------EeeCCCCCcCCCCCC
Confidence            45688888885             345667788988884

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.66  E-value=0.42  Score=28.28  Aligned_cols=29  Identities=31%  Similarity=0.496  Sum_probs=25.5

Q ss_pred             CCCceecCCCCCcCCChhHHHhHHhhccC
Q psy13793         73 GPKPYQCAICPRGYYSDIGLQNHLWSHRK  101 (337)
Q Consensus        73 ~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  101 (337)
                      +...|.|..|.-.|.+...|..|+..|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            44579999999999999999999998854

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.46  E-value=0.64  Score=23.68  Aligned_cols=27  Identities=33%  Similarity=0.560  Sum_probs=18.8

Q ss_pred             eecCCCccccCCchHHHHHHHhhCCCC
Q psy13793        292 YKCPFCPRTFASSGNCFSHRKRMHEGE  318 (337)
Q Consensus       292 ~~C~~C~k~f~~~~~L~~H~~~~H~~~  318 (337)
                      ..|-.|-+.|.+..++++|+-.+|.-+
T Consensus         4 ltclecmrtfkssfsiwrhqvevhnqn   30 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHNQN   30 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheecccc
Confidence            456777777777777777776777543