Psyllid ID: psy14522
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | yes | N/A | 0.580 | 0.276 | 0.457 | 5e-45 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.563 | 0.326 | 0.429 | 3e-40 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.563 | 0.326 | 0.434 | 3e-40 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.563 | 0.326 | 0.429 | 4e-40 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.563 | 0.326 | 0.434 | 5e-40 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.563 | 0.326 | 0.434 | 6e-39 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.563 | 0.326 | 0.413 | 1e-36 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.577 | 0.333 | 0.352 | 1e-32 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.577 | 0.333 | 0.347 | 8e-32 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.577 | 0.333 | 0.347 | 1e-31 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 122/188 (64%), Gaps = 15/188 (7%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
+FY G SVF+TGGTGFMGK L EKLLR+CP + +YLL+RPK+G+ VS RL EL LF
Sbjct: 121 QFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLF 180
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
L+ E P SK+ ++GD++ LG+S D+ +L RNV+VVFH AATV+FDE +K+++
Sbjct: 181 ESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSV 240
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
IN+ G+ +HVSTAY +C R ++ EV Y PPY+ D + L+
Sbjct: 241 TINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLP 300
Query: 290 DDNLEEFS 297
+D L++ +
Sbjct: 301 EDILDQLT 308
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G ++ +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + V+FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLID-SLEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 115/184 (62%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ V+ + ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLID-SLEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G ++ +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + V+FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLID-SLEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 115/184 (62%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ V+ + ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLID-SLEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 116/184 (63%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGFMGK L EKLLR+CP ++ VY+LVRPK G+T R++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P F+ KI V+T +++ P L LS + L + ++FH AATVRF+E ++ A+
Sbjct: 66 DRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ I+EV YPPP D K M+ +
Sbjct: 126 QLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMD-SLEWM 184
Query: 290 DDNL 293
DD+L
Sbjct: 185 DDSL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 115/184 (62%), Gaps = 16/184 (8%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
EFY+G +V +TG TGFMGK L EKLLR+CP+ + VY+LVR K G+ ER+ E+ +LF
Sbjct: 6 EFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMSCKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
+L+ E P K+ ++ +++ P L +S D+ L + +VFH AATVRF+E+++ A+
Sbjct: 66 DKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRDAM 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R++I+EV YPPP D K +E +
Sbjct: 126 QLNVIATRQLLYLAQKMKKLEVFIHVSTAYANCNRKQIEEVVYPPPVDPKKLIE-SLEWM 184
Query: 290 DDNL 293
DD+L
Sbjct: 185 DDSL 188
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 15/187 (8%)
Query: 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFS 185
FY G S+ +TG TGFMGK L EKL R P L+ VY+LVRPK+G+T+ +R+ ++ + +LF
Sbjct: 7 FYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDSKLFE 66
Query: 186 RLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIA 245
++K P+ KI ++ D++ +S D L + ++FH AATVRFD++++ A+
Sbjct: 67 KVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRHAVQ 126
Query: 246 INIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSD 290
+N+ + F+H+STA+++C + IDEV YP P + K ++ + D
Sbjct: 127 LNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLKHIDEVVYPCPVEPKKIIDSMEWLDD 186
Query: 291 DNLEEFS 297
++E +
Sbjct: 187 AIIDEIT 193
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 15/187 (8%)
Query: 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFS 185
FY S+ +TG TGF+GK L EKL R PHL+ +Y+LVRPK G+T+ ER+ ++ +LF
Sbjct: 7 FYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFE 66
Query: 186 RLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIA 245
++K P+ KI ++ D++ +S D L ++FH AATVRFD +++ A+
Sbjct: 67 KVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQ 126
Query: 246 INIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSD 290
+N+ + F+H+STA+++C IDEV YP P + + ++ + D
Sbjct: 127 LNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDD 186
Query: 291 DNLEEFS 297
+EE +
Sbjct: 187 SIIEEIT 193
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 15/187 (8%)
Query: 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFS 185
FY G S+ +TG TGF+GK L EKL R P L+ +Y+LVRPK G+T+ +R+ ++ + +LF
Sbjct: 7 FYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFE 66
Query: 186 RLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIA 245
++K P+ KI + D++ +S D L ++FH AATVRFD+ ++ A+
Sbjct: 67 KVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQ 126
Query: 246 INIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSD 290
+N+ + F+H+STAY++C + IDEV YP P + K ++ + D
Sbjct: 127 LNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDD 186
Query: 291 DNLEEFS 297
++E +
Sbjct: 187 AIIDEIT 193
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | ||||||
| 326510115 | 552 | predicted protein [Hordeum vulgare subsp | 0.765 | 0.413 | 0.401 | 2e-54 | |
| 193622556 | 551 | PREDICTED: putative fatty acyl-CoA reduc | 0.587 | 0.317 | 0.515 | 1e-51 | |
| 328720028 | 553 | PREDICTED: putative fatty acyl-CoA reduc | 0.573 | 0.309 | 0.532 | 2e-51 | |
| 156542672 | 543 | PREDICTED: putative fatty acyl-CoA reduc | 0.634 | 0.348 | 0.509 | 2e-50 | |
| 345496232 | 566 | PREDICTED: putative fatty acyl-CoA reduc | 0.634 | 0.333 | 0.509 | 2e-50 | |
| 328720030 | 552 | PREDICTED: putative fatty acyl-CoA reduc | 0.563 | 0.304 | 0.530 | 2e-50 | |
| 332030738 | 537 | Putative fatty acyl-CoA reductase [Acrom | 0.630 | 0.350 | 0.475 | 3e-48 | |
| 307207067 | 541 | Fatty acyl-CoA reductase 1 [Harpegnathos | 0.573 | 0.316 | 0.529 | 4e-47 | |
| 322803051 | 530 | hypothetical protein SINV_00151 [Solenop | 0.600 | 0.337 | 0.489 | 7e-47 | |
| 345496235 | 520 | PREDICTED: putative fatty acyl-CoA reduc | 0.587 | 0.336 | 0.473 | 2e-46 |
| >gi|326510115|dbj|BAJ87274.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 167/306 (54%), Gaps = 78/306 (25%)
Query: 1 MALDLHKIAVKLEQDVLSQGAPGAPKLEMSEIVTAQYPIDPFELLGENSFGKPRVVPPDE 60
MALDLH+ ++ + ++ M EIVT ++P++P EL+GE SF P V+
Sbjct: 1 MALDLHR------KNEFKKSKKSYDEI-MKEIVTDEFPLNPLELVGELSFDNPEVLEE-- 51
Query: 61 VGSPIQEFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDEL 120
T+KL R+
Sbjct: 52 ---------------------------TDKLPRS-------------------------- 58
Query: 121 FEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFE 180
+ +EFY+ A++F+TGGTGFMGK L EKL R+CPHL+ +YLL+R KKGK V+ER+D +FE
Sbjct: 59 -DIQEFYKDATIFITGGTGFMGKMLIEKLSRSCPHLKHIYLLIRNKKGKDVNERIDAIFE 117
Query: 181 DRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENI 240
DRLF RLK E P F KIS + GD SLPGLG+S+ DR L NV +VFH AAT+RFDE+I
Sbjct: 118 DRLFMRLKHERPKFYHKISAIAGDASLPGLGISSCDRQKLAENVNIVFHAAATIRFDEHI 177
Query: 241 KVAIAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELV 285
+ AI IN+ G+ ++VSTAY +C +I+E FY PY+Y + LV
Sbjct: 178 RTAININVLGTREIINLAKEMTNLKACMYVSTAYANCVHNKIEEKFYGAPYNYDGVISLV 237
Query: 286 MSRSDD 291
S +DD
Sbjct: 238 TSANDD 243
|
Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 131/190 (68%), Gaps = 15/190 (7%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
+EF+R VF+TGGTGFMGK L EKLLR CPH++ +YLL+R KKGK V +RL+++FEDRL
Sbjct: 59 QEFFRDGVVFLTGGTGFMGKVLVEKLLRTCPHIKHIYLLIRSKKGKNVDQRLEDIFEDRL 118
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA 243
F RLK EVP + K+S V GD SLPGLGLS + R L V ++FHGAATVRFDE+I+VA
Sbjct: 119 FKRLKHEVPKYYHKVSGVAGDCSLPGLGLSVSSRNTLINEVNIIFHGAATVRFDEHIRVA 178
Query: 244 IAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288
+ IN+ G+ HVSTAY++C R ++E FY P DY+D ++L+ S
Sbjct: 179 MNINVSGTRELLSLARKITNLKVMAHVSTAYSNCNRLHVEEKFYDPIADYEDVLKLISSN 238
Query: 289 SDDNLEEFSR 298
D L++ ++
Sbjct: 239 DDQTLQDMTK 248
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 128/186 (68%), Gaps = 15/186 (8%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
+EF+R VF+TGGTGFMGK L EKLLR CPH++ +YLL+R KKGK V ERL+++FEDRL
Sbjct: 60 QEFFRDGVVFLTGGTGFMGKVLVEKLLRTCPHIKHIYLLIRSKKGKNVDERLEDIFEDRL 119
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA 243
F RLK EVP + K+S + GD SLPGLGLS + R L + V ++FHGAATVRFDE+I+VA
Sbjct: 120 FKRLKYEVPKYYHKVSGIAGDCSLPGLGLSVSSRNTLIKEVNIIFHGAATVRFDEHIRVA 179
Query: 244 IAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288
+ IN+ G+ H+STA+++C R +DE FY P DYKD ++LV S
Sbjct: 180 MDINVSGTREMMNLAKTITNLKVIAHISTAFSNCNRLHVDEKFYDPIADYKDVLKLVSST 239
Query: 289 SDDNLE 294
D L
Sbjct: 240 DDQTLH 245
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156542672|ref|XP_001602734.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 136/204 (66%), Gaps = 15/204 (7%)
Query: 110 GKTVSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK 169
G +SE +L ++FY G S+FVTGGTGFMGK L EKLLR+CP + VYLLVRPKKGK
Sbjct: 35 GTQISEGHTDLTTLQQFYTGQSIFVTGGTGFMGKLLIEKLLRSCPGIAFVYLLVRPKKGK 94
Query: 170 TVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFH 229
V +R +ELF+D LFS+L+ E P FR +I ++GD SLPGLG+SAADRA L R V++VFH
Sbjct: 95 DVHQRTEELFDDPLFSKLREEQPKFRHQIVAISGDCSLPGLGISAADRATLVREVSIVFH 154
Query: 230 GAATVRFDENIKVAIAINI---------------FGSFVHVSTAYTHCPRQEIDEVFYPP 274
AATVRFDE +K+A+AIN+ S +HVSTAY +C + I+E FY
Sbjct: 155 VAATVRFDEKLKLAVAINVQSPRDILSLCKEMPQLKSCIHVSTAYANCVQNTIEEKFYDA 214
Query: 275 PYDYKDFMELVMSRSDDNLEEFSR 298
P D + LV + D +++ +R
Sbjct: 215 PIDGNKLISLVETMDDKLVDDITR 238
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345496232|ref|XP_003427678.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 136/204 (66%), Gaps = 15/204 (7%)
Query: 110 GKTVSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK 169
G +SE +L ++FY G S+FVTGGTGFMGK L EKLLR+CP + VYLLVRPKKGK
Sbjct: 58 GTQISEGHTDLTTLQQFYTGQSIFVTGGTGFMGKLLIEKLLRSCPGIAFVYLLVRPKKGK 117
Query: 170 TVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFH 229
V +R +ELF+D LFS+L+ E P FR +I ++GD SLPGLG+SAADRA L R V++VFH
Sbjct: 118 DVHQRTEELFDDPLFSKLREEQPKFRHQIVAISGDCSLPGLGISAADRATLVREVSIVFH 177
Query: 230 GAATVRFDENIKVAIAINI---------------FGSFVHVSTAYTHCPRQEIDEVFYPP 274
AATVRFDE +K+A+AIN+ S +HVSTAY +C + I+E FY
Sbjct: 178 VAATVRFDEKLKLAVAINVQSPRDILSLCKEMPQLKSCIHVSTAYANCVQNTIEEKFYDA 237
Query: 275 PYDYKDFMELVMSRSDDNLEEFSR 298
P D + LV + D +++ +R
Sbjct: 238 PIDGNKLISLVETMDDKLVDDITR 261
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328720030|ref|XP_001944359.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 125/183 (68%), Gaps = 15/183 (8%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
+EFYR S+F+TGGTGFMGK L EKL R+CPHL+ +YLL+R KKGK V+ER+D +F+DRL
Sbjct: 61 QEFYRDTSIFITGGTGFMGKMLIEKLSRSCPHLKHIYLLIRNKKGKDVNERIDAIFDDRL 120
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA 243
F RLK E P F KIS + GD SLPGLG+S DR L NV +VFH AAT+RFDE+I+ A
Sbjct: 121 FMRLKHERPKFYHKISAIAGDASLPGLGISPRDRQTLAENVNIVFHAAATIRFDEHIRTA 180
Query: 244 IAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288
I IN+ G+ ++VSTAY +C +I+E FY PY+Y + LV S
Sbjct: 181 ININVLGTREIINLAKEMTKLKACMYVSTAYANCVHSKIEEKFYEAPYNYNGVISLVTSA 240
Query: 289 SDD 291
++D
Sbjct: 241 NND 243
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332030738|gb|EGI70414.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 132/206 (64%), Gaps = 18/206 (8%)
Query: 107 PKKGKTVSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166
P + V+E+L + +EFY G S+F+TGGTGFMGK L EKLLR CP + +YLLVRPK
Sbjct: 26 PSENSPVNEKLSPI---QEFYNGQSIFITGGTGFMGKLLIEKLLRTCPGVTSIYLLVRPK 82
Query: 167 KGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTV 226
KGK V +R +++F+D +FS+L+ E P FR +I + GD S P LG+SA DRA L R V++
Sbjct: 83 KGKDVHQRTEDIFDDTVFSKLRDEQPKFRHQIVAIAGDCSQPNLGISAQDRATLIREVSI 142
Query: 227 VFHGAATVRFDENIKVAIAINI---------------FGSFVHVSTAYTHCPRQEIDEVF 271
VFH AATVRFDE +K+A+ IN+ SF+HVSTAY +CP+ I+E F
Sbjct: 143 VFHVAATVRFDEKLKLAVPINVRSTRDVVNLCKEITNLKSFIHVSTAYANCPQSVIEEKF 202
Query: 272 YPPPYDYKDFMELVMSRSDDNLEEFS 297
Y PP D + L+ D E+ +
Sbjct: 203 YDPPMDSDKLIALIECIEDKLAEDIT 228
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307207067|gb|EFN84876.1| Fatty acyl-CoA reductase 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 125/187 (66%), Gaps = 16/187 (8%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
+EFY G SVF+TGGTGFMGK L EKLLR CP + +YLLVRPKKGK V +R +E+F+D L
Sbjct: 45 QEFYNGQSVFITGGTGFMGKLLIEKLLRDCPGIASIYLLVRPKKGKDVHQRTEEIFDDPL 104
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA 243
F +LK E P FR ++ + GD S P LG+S+ DR L R V++VFH AATVRFDE +K+A
Sbjct: 105 FIKLKDEQPKFRHQVVAIAGDCSQPNLGISSQDRDTLIREVSIVFHVAATVRFDEKLKLA 164
Query: 244 IAINI---------------FGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288
+AIN+ SFVHVSTAY +CP++ I+E FY PP D D + VM
Sbjct: 165 MAINVRSAKDILYLCKEMTNLKSFVHVSTAYANCPQRVIEEKFYDPPID-SDKLIAVMEC 223
Query: 289 SDDNLEE 295
+D L E
Sbjct: 224 MEDKLVE 230
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322803051|gb|EFZ23139.1| hypothetical protein SINV_00151 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 130/198 (65%), Gaps = 19/198 (9%)
Query: 113 VSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVS 172
V+E+L + +EFY G ++F+TGGTGFMGK L EK+LR CP + +YLLVRPKKGK V
Sbjct: 32 VNEKLSPI---QEFYYGQTIFITGGTGFMGKLLIEKILRTCPGVTSIYLLVRPKKGKDVH 88
Query: 173 ERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232
+R +E+F+D +F +L+ E+P FR +I + GD S P LG+SA DRA L R V++VFH AA
Sbjct: 89 QRTEEIFDDAVFMKLRDELPKFRHQIVAIAGDCSQPNLGMSAQDRATLIREVSIVFHVAA 148
Query: 233 TVRFDENIKVAIAINI---------------FGSFVHVSTAYTHCPRQEIDEVFYPPPYD 277
TVRFDE +K+A+ IN+ SF+HVSTAY +CP+ I+E FY PP D
Sbjct: 149 TVRFDEKLKLAVPINVRSTRDVVNLCKEITNLKSFIHVSTAYANCPQSLIEEKFYEPPMD 208
Query: 278 YKDFMELVMSRSDDNLEE 295
+ L M +D L E
Sbjct: 209 SDKLIAL-MECVEDKLAE 225
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345496235|ref|XP_001602762.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 15/190 (7%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
++FY G +V +TGGTGF+GK L EKLLR+CP + +Y+++RPKKG+ RLD LF+D +
Sbjct: 16 QKFYAGQNVLITGGTGFLGKLLIEKLLRSCPEVSSIYIIIRPKKGQDAYHRLDTLFDDVI 75
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA 243
FSR+K EVP +R K++ + GD SLPGLGL+A D+ V+ R +++VF+ AATVRFDE IK A
Sbjct: 76 FSRMKKEVPKYRHKVTAIPGDCSLPGLGLTALDKEVIMREISIVFNVAATVRFDEKIKQA 135
Query: 244 IAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288
+AIN+ + +HVSTAY++C R +IDE FY PP + +LV S
Sbjct: 136 VAINVNSTKEIMELARRIHNLKVIIHVSTAYSNCIRGDIDEKFYEPPITGDNANKLVQSL 195
Query: 289 SDDNLEEFSR 298
D L+ ++
Sbjct: 196 DDKKLDAITQ 205
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | ||||||
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.580 | 0.276 | 0.457 | 1.4e-40 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.563 | 0.326 | 0.429 | 1.3e-36 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.563 | 0.326 | 0.423 | 1.7e-36 | |
| UNIPROTKB|E9PNW8 | 335 | FAR1 "Fatty acyl-CoA reductase | 0.563 | 0.501 | 0.434 | 2.1e-36 | |
| UNIPROTKB|Q8WVX9 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.563 | 0.326 | 0.434 | 2.1e-36 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.563 | 0.326 | 0.429 | 2.1e-36 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.563 | 0.326 | 0.429 | 2.1e-36 | |
| UNIPROTKB|A5PJQ0 | 515 | FAR1 "Uncharacterized protein" | 0.563 | 0.326 | 0.429 | 2.7e-36 | |
| UNIPROTKB|E1C023 | 517 | FAR1 "Fatty acyl-CoA reductase | 0.563 | 0.324 | 0.434 | 1.2e-35 | |
| UNIPROTKB|Q5ZM72 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.563 | 0.326 | 0.434 | 1.2e-35 |
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 86/188 (45%), Positives = 122/188 (64%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
+FY G SVF+TGGTGFMGK L EKLLR+CP + +YLL+RPK+G+ VS RL EL LF
Sbjct: 121 QFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLF 180
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
L+ E P SK+ ++GD++ LG+S D+ +L RNV+VVFH AATV+FDE +K+++
Sbjct: 181 ESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSV 240
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
IN+ G+ +HVSTAY +C R ++ EV Y PPY+ D + L+
Sbjct: 241 TINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLP 300
Query: 290 DDNLEEFS 297
+D L++ +
Sbjct: 301 EDILDQLT 308
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 79/184 (42%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G ++ +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + V+FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 78/184 (42%), Positives = 116/184 (63%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR K+ + +++ P L LS D+ ++ ++ ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKVIAINSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 80/184 (43%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ V+ + ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 80/184 (43%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ V+ + ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 79/184 (42%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G ++ +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + V+FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 79/184 (42%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G ++ +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + V+FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 79/184 (42%), Positives = 115/184 (62%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGF+GK L EKLLR+CP + VY+LVR K G+T ER++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P FR KI + +++ P L LS D+ ++ + ++FH AATVRF+EN++ A+
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ IDEV YPPP D K ++ +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS-LEWM 184
Query: 290 DDNL 293
DD L
Sbjct: 185 DDGL 188
|
|
| UNIPROTKB|E1C023 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/184 (43%), Positives = 116/184 (63%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGFMGK L EKLLR+CP ++ VY+LVRPK G+T R++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P F+ KI V+T +++ P L LS + L + ++FH AATVRF+E ++ A+
Sbjct: 66 DRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ I+EV YPPP D K M+ +
Sbjct: 126 QLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDS-LEWM 184
Query: 290 DDNL 293
DD+L
Sbjct: 185 DDSL 188
|
|
| UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/184 (43%), Positives = 116/184 (63%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLF 184
E+Y G +V +TG TGFMGK L EKLLR+CP ++ VY+LVRPK G+T R++E+ +LF
Sbjct: 6 EYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLF 65
Query: 185 SRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI 244
RL+ E P F+ KI V+T +++ P L LS + L + ++FH AATVRF+E ++ A+
Sbjct: 66 DRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAV 125
Query: 245 AINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRS 289
+N+ + F+HVSTAY +C R+ I+EV YPPP D K M+ +
Sbjct: 126 QLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDS-LEWM 184
Query: 290 DDNL 293
DD+L
Sbjct: 185 DDSL 188
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 298 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 6e-62 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 5e-46 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 1e-22 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-21 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 7e-21 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-15 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-14 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 1e-14 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 2e-13 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 1e-10 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 2e-07 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 4e-07 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-05 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-04 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 2e-04 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 7e-04 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 0.001 | |
| pfam13191 | 154 | pfam13191, AAA_16, AAA ATPase domain | 0.001 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 0.002 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 0.002 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 0.002 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.003 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 6e-62
Identities = 77/168 (45%), Positives = 103/168 (61%), Gaps = 15/168 (8%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
SV +TG TGF+GK L EKLLR+CP + ++YLL+R K G++ ERL EL +D+LF R +
Sbjct: 2 SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG 250
P F SKI + GD+S P LGLS D L V ++ H AATV FDE + A++IN+ G
Sbjct: 62 NPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLG 121
Query: 251 S---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFME 283
+ FVHVSTAY + RQ I+E YPPP D + ++
Sbjct: 122 TLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLID 169
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 5e-46
Identities = 63/147 (42%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 134 VTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERL-DELFEDRLFSRLKAEVP 192
+TG TGF+GK L EKLLR+ P + ++Y LVR K G++ ERL EL + LF RLKA
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEV-KIYCLVRAKDGESALERLRQELLKYGLFDRLKA--- 56
Query: 193 HFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG-- 250
+I V GD+S P LGLS D L V V+ H AATV F E A N+ G
Sbjct: 57 --LERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTR 114
Query: 251 ------------SFVHVSTAYTHCPRQ 265
F HVSTAY + R
Sbjct: 115 EVLRLAKQMKKLPFHHVSTAYVNGERG 141
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 1e-22
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
Query: 119 ELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERL-DE 177
E +F ++ VTG TGF+ K EK+LR P+++++YLL+R K+ ++RL DE
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 178 LFEDRLFSRLK----AEVPHFRS-KISVVTGDVSLPGLGLSAAD-RAVLRRNVTVVFHGA 231
+ LF L+ + S K++ V GD+S LG+ ++ R + + + +V + A
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 232 ATVRFDENIKVAIAINIFGS---------------FVHVSTAY 259
AT FDE VA+ IN G+ +HVSTAY
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163
|
Length = 491 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 5e-21
Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
VFVTGGTGF+G+ L ++LL +V +LVR + ER++E
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN---GFKVLVLVRSESLGEAHERIEEA------------- 44
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGS 251
++ V+ GD++ P LGLSAA L V V H AA+ F + A NI G+
Sbjct: 45 GLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGT 104
Query: 252 --------------FVHVSTAYTHCPRQEI 267
F +VSTAY R+
Sbjct: 105 EHVLELAARLDIQRFHYVSTAYVAGNREGN 134
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 92.2 bits (229), Expect = 7e-21
Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERL-DELFEDRL 183
EF RG + +TG TGF+ K L EK+LR P + ++YLL++ K + ERL +E+ + L
Sbjct: 115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAEL 174
Query: 184 FSRL-----KAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDE 238
F L K+ SK+ V G+V LGL + + V V+ + AA FDE
Sbjct: 175 FKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDE 234
Query: 239 NIKVAIAINIFGS---------------FVHVSTAYTHCPRQ 265
VAI IN G F+ VSTAY + RQ
Sbjct: 235 RYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276
|
Length = 605 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V +TG TGF+G L +LL +V LVR + + RL++ F+ +
Sbjct: 3 VLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELSA- 59
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF 236
++ VV GD++ P LGLS L NV ++ H AA V
Sbjct: 60 ----DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH 100
|
Length = 382 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-14
Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
+V +TG TGF+G L +LL+ ++ ++Y LVR K + ERL + ++ +
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDEL 59
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVA---- 243
S+I VV GD+S P LGLS D L V V+ H A V + E +K A
Sbjct: 60 ---ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPANVLG 116
Query: 244 -------IAINIFGSFVHVSTAYT 260
A VST
Sbjct: 117 TKELLKLAATGKLKPLHFVSTLSV 140
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-14
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
+V +TG TGF+G L E+LLR +V LVR + ERL E +
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAASEEHAMERLREALRS-YRLWHEDL 58
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF 236
R +I VV GD+S P LGLS A+ L NV + H A V +
Sbjct: 59 A---RERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNW 101
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 2e-13
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 76 VTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFY 127
+TG TGF+GK L EKLLR+ P + ++Y LVR K G++ ERL + +
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEV-KIYCLVRAKDGESALERLRQELLKYGLF 51
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 133 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVP 192
FVTGGTGF+G+ L +LL V++LVR + RL+ L R+
Sbjct: 4 FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQS----LSRLEALAAYWGADRVVP--- 55
Query: 193 HFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232
+ GD++ PGLGLS AD A L ++ V H AA
Sbjct: 56 --------LVGDLTEPGLGLSEADIAEL-GDIDHVVHLAA 86
|
Length = 657 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 108 KKGKTVSERLDELFEDREFYRGAS---VFVTGGTGFMGKTLTEKLL-RACPHLERVYLLV 163
K KT+ + L + + R+ ++ VF+TG TGF+G + LL R +V+ V
Sbjct: 947 KDAKTLVDSLPKSYPSRKELDASTPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHV 1006
Query: 164 RPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRN 223
R K + ERL + + + S+I VV GD+S GLS + L
Sbjct: 1007 RAKSEEAGLERLRKTGTTYGIWDEE-----WASRIEVVLGDLSKEKFGLSDEKWSDLTNE 1061
Query: 224 VTVVFHGAATV 234
V V+ H A V
Sbjct: 1062 VDVIIHNGALV 1072
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 4e-07
Identities = 37/161 (22%), Positives = 51/161 (31%), Gaps = 47/161 (29%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ VTG TGF+G L LL RV LVR L
Sbjct: 1 ILVTGATGFLGSNLVRALLAQG---YRVRALVRSG------SDAVLLDGLP--------- 42
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG 250
+ VV GD++ ++ A+ + VFH AA ++ K N+ G
Sbjct: 43 ------VEVVEGDLTDA----ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEG 90
Query: 251 S--------------FVHVST--AYTHCPRQEIDEVFYPPP 275
+ VH S+ A P IDE
Sbjct: 91 TRNVLDAALEAGVRRVVHTSSIAALGGPPDGRIDETTPWNE 131
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYR 128
VFVTGGTGF+G+ L ++LL +V +LVR + ER++E + + R
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN---GFKVLVLVRSESLGEAHERIEEAGLEADRVR 52
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 75 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFED 123
FVTGGTGF+G+ L +LL V++LVR + RL+ L
Sbjct: 4 FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQS----LSRLEALAAY 47
|
Length = 657 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLK 188
G ++ VTGG G +G L ++L+ P +++ + R + L EL + L+
Sbjct: 2 GKTILVTGGAGSIGSELVRQILKFGP--KKLIVFDRDENK------LHELVRE-----LR 48
Query: 189 AEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT--VRF-DENIKVAIA 245
+ PH K+ + GDV RA R +VFH AA V ++N + AI
Sbjct: 49 SRFPH--DKLRFIIGDVR----DKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIK 102
Query: 246 INIFGS 251
N+ G+
Sbjct: 103 TNVLGT 108
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 37/158 (23%), Positives = 52/158 (32%), Gaps = 44/158 (27%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
+V VTG GF+G LTE+LLR V L + D
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHE---VRALDI------YNSFNSWGLLD--------- 42
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA---IAIN 247
+ ++GDV + V + VVFH AA + + + N
Sbjct: 43 -NAVHDRFHFISGDVRDASEV----EYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETN 95
Query: 248 IFGS--------------FVHVSTA--YTHCPRQEIDE 269
+FG+ VH ST+ Y IDE
Sbjct: 96 VFGTLNVLEAACVLYRKRVVHTSTSEVYGTAQDVPIDE 133
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 36/107 (33%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V VTG TGF+G + LL E V +LVRP S+R + L E
Sbjct: 3 VLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPT-----SDRRN-------LEGLDVE- 46
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVT---VVFHGAATVR 235
+V GD+ D A LR+ V +FH AA R
Sbjct: 47 --------IVEGDL---------RDPASLRKAVAGCRALFHVAADYR 76
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|221970 pfam13191, AAA_16, AAA ATPase domain | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.001
Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 115 ERLDELFEDREFYRGASVFVTGGTGFMGKT-LTEKLLRACPHLERVYLLVRPKKGKTVSE 173
ERL + SV +TG +G GKT L +LL S+
Sbjct: 10 ERLLDALRRARSGGPPSVLLTGPSG-TGKTSLLRELLEGLLVAAGKCDQAERNPPYAFSQ 68
Query: 174 RLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL--GLSAADRAVLRRNVTVVF 228
L EL +L L AE+ R + G + GL + +R + R V+
Sbjct: 69 ALRELLR-QLLRELAAELLLLREALLAALGAELIEGLQDLVELLERLLARARPLVLV 124
|
This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Length = 154 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 108
+ VTG TGF+G L LL RV LVR
Sbjct: 1 ILVTGATGFLGSNLVRALLAQG---YRVRALVRSG 32
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 36/137 (26%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRL 183
G +V VTGG G +G L ++L+ P + + L R DE +
Sbjct: 245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSR-----------DEYKLYLI 291
Query: 184 FSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRR-----NVTVVFHGAA-----T 233
L+ + P K+ GDV DR + R V +VFH AA
Sbjct: 292 DMELREKFPE--LKLRFYIGDV---------RDRDRVERAMEGHKVDIVFHAAALKHVPL 340
Query: 234 VRFDENIKVAIAINIFG 250
V + N + AI N+ G
Sbjct: 341 VEY--NPEEAIKTNVLG 355
|
Length = 588 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.002
Identities = 36/164 (21%), Positives = 52/164 (31%), Gaps = 51/164 (31%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ VTGG GF+G L E+LL A G V R RL+ +
Sbjct: 3 ILVTGGAGFIGSHLVERLLAA---------------GHDV----------RGLDRLRDGL 37
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF----DENIKVAIAIN 247
S + V D++ + + V H AA + + +N
Sbjct: 38 DPLLSGVEFVVLDLTDR-----DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVN 92
Query: 248 IFGS--------------FVHVSTA---YTHCPRQEIDEVFYPP 274
+ G+ FV S+ Y P IDE PP
Sbjct: 93 VDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPP 136
|
Length = 314 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 38.2 bits (90), Expect = 0.003
Identities = 40/150 (26%), Positives = 54/150 (36%), Gaps = 50/150 (33%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V VTGG G +G L ++L+ P +++ L R DE + L+ E
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNP--KKIILFSR-----------DEFKLYEIRQELRQEY 47
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRR-----NVTVVFHGAA-----TVRFDENIK 241
K+ GDV DR L R V VFH AA V + N
Sbjct: 48 ND--PKLRFFIGDV---------RDRERLERAMEQHGVDTVFHAAALKHVPLVEY--NPM 94
Query: 242 VAIAINIFGS--------------FVHVST 257
AI N+ G+ FV +ST
Sbjct: 95 EAIKTNVLGTENVAEAAIENGVEKFVLIST 124
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.93 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.92 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.87 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.87 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.87 | |
| KOG1221|consensus | 467 | 99.86 | ||
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.77 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.76 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.74 | |
| KOG1502|consensus | 327 | 99.71 | ||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.71 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.69 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.67 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.66 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.66 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.66 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.64 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.64 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.64 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.63 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.62 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.62 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.61 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.61 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.6 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.59 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.59 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.59 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.58 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.58 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.57 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.57 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.56 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.56 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.55 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.54 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.54 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.53 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.53 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.53 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.53 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.52 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.52 | |
| KOG1371|consensus | 343 | 99.52 | ||
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.51 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.48 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.48 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.48 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.47 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.47 | |
| KOG1430|consensus | 361 | 99.46 | ||
| KOG1205|consensus | 282 | 99.46 | ||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.45 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.44 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.44 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.43 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.42 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.42 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.42 | |
| KOG1429|consensus | 350 | 99.42 | ||
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.41 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.41 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.41 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.39 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.39 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.39 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.38 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.38 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.36 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.36 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.36 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.36 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.36 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.36 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.35 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.34 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.33 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.33 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.33 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.33 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.33 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.32 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.32 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.32 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.32 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.31 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.31 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.31 | |
| KOG0747|consensus | 331 | 99.31 | ||
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.3 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.3 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.3 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.3 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.3 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.29 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.29 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.29 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.29 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.29 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.29 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.29 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.29 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.29 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.29 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.29 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.28 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.28 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.28 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.28 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.27 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.27 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.27 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.27 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.27 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.27 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.26 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.26 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.25 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.25 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.25 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.25 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.24 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.24 | |
| KOG1208|consensus | 314 | 99.24 | ||
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.24 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.24 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.23 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.23 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.23 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.23 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.23 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.23 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.22 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.22 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.22 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.22 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.22 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.22 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.22 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.21 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.21 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.21 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.19 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.19 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.19 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.19 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.19 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.17 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.17 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.17 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.17 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.17 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.16 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.16 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.16 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.15 | |
| KOG4169|consensus | 261 | 99.15 | ||
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.14 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.14 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.13 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.13 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.12 | |
| KOG1201|consensus | 300 | 99.12 | ||
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.12 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.11 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.1 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.1 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.09 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.09 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.09 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.09 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.09 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.08 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.07 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.07 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.06 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.05 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.05 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.03 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.03 | |
| KOG1611|consensus | 249 | 99.02 | ||
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.0 | |
| KOG0725|consensus | 270 | 98.98 | ||
| PRK05599 | 246 | hypothetical protein; Provisional | 98.98 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.92 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.91 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.86 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.84 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.78 | |
| KOG1610|consensus | 322 | 98.74 | ||
| KOG1209|consensus | 289 | 98.7 | ||
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.68 | |
| KOG1372|consensus | 376 | 98.66 | ||
| KOG1014|consensus | 312 | 98.66 | ||
| KOG1221|consensus | 467 | 98.66 | ||
| KOG1200|consensus | 256 | 98.6 | ||
| KOG1431|consensus | 315 | 98.59 | ||
| KOG2865|consensus | 391 | 98.59 | ||
| PRK06720 | 169 | hypothetical protein; Provisional | 98.57 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.57 | |
| KOG1207|consensus | 245 | 98.55 | ||
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.52 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.51 | |
| KOG1478|consensus | 341 | 98.5 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.45 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.43 | |
| KOG1210|consensus | 331 | 98.4 | ||
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.26 | |
| KOG1204|consensus | 253 | 98.23 | ||
| PRK09620 | 229 | hypothetical protein; Provisional | 98.07 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.02 | |
| KOG1199|consensus | 260 | 98.01 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.0 | |
| KOG4039|consensus | 238 | 97.94 | ||
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.94 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.84 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.81 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.76 | |
| KOG2774|consensus | 366 | 97.69 | ||
| KOG1203|consensus | 411 | 97.68 | ||
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.65 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.63 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.57 | |
| PLN00106 | 323 | malate dehydrogenase | 97.55 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.54 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.43 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.4 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.39 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.29 | |
| KOG1178|consensus | 1032 | 97.15 | ||
| KOG2733|consensus | 423 | 96.93 | ||
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.91 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.85 | |
| KOG4288|consensus | 283 | 96.79 | ||
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.79 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 96.76 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.68 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 96.67 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.5 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.44 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 96.44 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.38 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 96.37 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.37 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 96.04 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 95.76 | |
| PRK05691 | 4334 | peptide synthase; Validated | 95.75 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 95.74 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.67 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 95.59 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 95.41 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 95.2 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.18 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.02 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.0 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 94.99 | |
| PRK05691 | 4334 | peptide synthase; Validated | 94.89 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 94.65 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 94.6 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 94.46 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 94.4 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 94.38 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.02 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 93.96 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 93.93 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 93.62 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 93.58 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 93.38 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.19 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 93.14 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 93.0 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 93.0 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 92.86 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 92.77 | |
| KOG1202|consensus | 2376 | 92.7 | ||
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 92.63 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 92.6 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 92.46 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 92.43 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 92.39 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 92.39 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.37 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 92.33 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 92.31 | |
| PRK08223 | 287 | hypothetical protein; Validated | 92.24 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 92.05 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 91.79 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 91.76 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.72 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 91.67 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 91.58 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 91.33 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 91.25 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 91.19 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 91.09 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 91.01 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 90.88 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 90.86 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 90.79 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 90.78 | |
| KOG1494|consensus | 345 | 90.68 | ||
| KOG1198|consensus | 347 | 90.6 | ||
| KOG0023|consensus | 360 | 90.56 | ||
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 90.41 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 90.34 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 90.21 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 89.99 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 89.92 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 89.88 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 89.84 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 89.77 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 89.53 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 89.41 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.28 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 89.23 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 89.08 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 88.72 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 88.67 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 88.55 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 88.5 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 88.49 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 88.41 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 88.07 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 87.79 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 87.55 | |
| PRK07411 | 390 | hypothetical protein; Validated | 87.18 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.15 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 87.14 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 87.12 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 86.97 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 86.96 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 86.67 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 86.39 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 86.32 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 86.31 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.29 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 86.28 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 85.95 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.69 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 85.48 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.33 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 84.95 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 84.89 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 84.8 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 84.77 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 84.76 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 84.75 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 84.6 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.58 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 84.48 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 84.41 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 84.35 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 84.19 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.19 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.1 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 83.69 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.66 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.57 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 83.45 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 83.44 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 83.26 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 83.12 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 83.0 | |
| PLN02928 | 347 | oxidoreductase family protein | 82.94 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.91 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 82.89 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 82.82 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 82.8 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 82.63 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 82.6 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 82.54 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 82.48 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 82.27 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.24 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 82.2 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 82.08 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.86 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.8 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 81.74 | |
| KOG2013|consensus | 603 | 81.73 | ||
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.65 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 81.57 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.5 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 81.39 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 81.33 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 81.31 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 81.19 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 81.15 | |
| KOG4022|consensus | 236 | 81.12 | ||
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.04 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 80.85 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 80.82 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 80.58 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.57 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 80.35 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 80.31 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 80.28 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.16 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 80.02 |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=207.23 Aligned_cols=161 Identities=25% Similarity=0.288 Sum_probs=133.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++||+||||||+|++++.+|+.+ .+ .+|+|++|..+.+.+.+|+++.+..+ ..+.+.+.++++++.||++.+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~-~~-~kv~cLVRA~s~E~a~~RL~~~~~~~-----~~~~e~~~~ri~vv~gDl~e~~ 73 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDR-SD-AKVICLVRAQSDEAALARLEKTFDLY-----RHWDELSADRVEVVAGDLAEPD 73 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhc-CC-CcEEEEEecCCHHHHHHHHHHHhhhh-----hhhhhhhcceEEEEeccccccc
Confidence 57999999999999999999998 44 68999999999999999999988731 1122345689999999999999
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCC------CccC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQ------EIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~------~~~E 269 (298)
+||+...|..+.+.+|.|||||+.+++..+|+++...||.| .++|+||+++..... ...|
T Consensus 74 lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~ 153 (382)
T COG3320 74 LGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDE 153 (382)
T ss_pred CCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccc
Confidence 99999999999999999999999999999999999999999 599999986543211 1222
Q ss_pred cCCC--CCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 270 VFYP--PPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 270 ~~~~--~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
..+. ......++|..|||++|.+++++.
T Consensus 154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~ 183 (382)
T COG3320 154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAG 183 (382)
T ss_pred ccccccccCccCCCcchhHHHHHHHHHHHh
Confidence 2222 233567899999999999999874
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-26 Score=202.59 Aligned_cols=160 Identities=36% Similarity=0.540 Sum_probs=109.5
Q ss_pred ecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHH-HHHhhhhhcCccccCCeEEEecCCCCCCCCC
Q psy14522 134 VTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFED-RLFSRLKAEVPHFRSKISVVTGDVSLPGLGL 212 (298)
Q Consensus 134 VTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~-~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl 212 (298)
|||||||||++|+++|+++++.+ +|+|++|..+...+.+|+.+.+.. .++..... ...++++++.||++++.|||
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL 76 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL 76 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence 79999999999999999996544 899999998877888888766543 33322210 12489999999999999999
Q ss_pred CHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCC-Cc-------cCc
Q psy14522 213 SAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQ-EI-------DEV 270 (298)
Q Consensus 213 ~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~-~~-------~E~ 270 (298)
+.+.+..+.+++|+||||||.+++..++.++.++||.| +|+|+||.+..+... .+ .+.
T Consensus 77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~ 156 (249)
T PF07993_consen 77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED 156 (249)
T ss_dssp -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999 999999965544322 22 222
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
....+....++|..|||+||++++++.
T Consensus 157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~ 183 (249)
T PF07993_consen 157 DLDPPQGFPNGYEQSKWVAERLLREAA 183 (249)
T ss_dssp EEE--TTSEE-HHHHHHHHHHHHHHHH
T ss_pred cchhhccCCccHHHHHHHHHHHHHHHH
Confidence 223344556799999999999999874
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=209.42 Aligned_cols=258 Identities=21% Similarity=0.198 Sum_probs=177.6
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCC------------CC----------------CCCccccccCCeEEEecCcccchH
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPD------------EV----------------GSPIQEFYRGASVFVTGGTGFMGK 85 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~----------------~~~~~~~~~~~~ff~~Gg~sl~~~ 85 (298)
....|.+..+|++++.+..|...... .. +.+..++..+++||.+||||+++.
T Consensus 806 ~~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~ 885 (1389)
T TIGR03443 806 LKKLPLNPNGKVDKPALPFPDTAQLAAVAKNRSASAADEEFTETEREIRDLWLELLPNRPATISPDDSFFDLGGHSILAT 885 (1389)
T ss_pred cccCCCCCCccccHhhcCCCchhhhhhhhccccccccCCCCCHHHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHH
Confidence 34558888899998887655321100 00 111346899999999999999998
Q ss_pred HHHHHH------------HhhCCChHHhHHhhccCCCCc---------hh-------hhhhh----hh-hhhh-------
Q psy14522 86 TLTEKL------------LRACPHLERVYLLVRPKKGKT---------VS-------ERLDE----LF-EDRE------- 125 (298)
Q Consensus 86 ~l~~~l------------l~~~ptv~~l~~~i~~~~~~~---------~~-------~rl~~----~~-~~~~------- 125 (298)
++..++ ++++||++.|+.++....... .. .++.+ +. .++.
T Consensus 886 ~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 965 (1389)
T TIGR03443 886 RMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLKKGEELADEGDSEIEEEETVLELDYAKDAKTLVDSLPKSYPSRKE 965 (1389)
T ss_pred HHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhhcccccccccccccchhcccccchhhhhhhhhhhcccccCCcccc
Confidence 876544 568999999998876532111 00 01100 00 0111
Q ss_pred --hhcCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 126 --FYRGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 126 --~~~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
....++|+|||||||+|++++++|++++ ....+|+|++|........+++.+....+.. +......++.++.
T Consensus 966 ~~~~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~i~~~~ 1040 (1389)
T TIGR03443 966 LDASTPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI-----WDEEWASRIEVVL 1040 (1389)
T ss_pred cccCCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC-----CchhhhcceEEEe
Confidence 1235789999999999999999999986 1246799999987655555666554432110 1112235899999
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCC-----
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCP----- 263 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~----- 263 (298)
+|++++.+|++...+..+..++|+|||+||.+++..++..+...|+.| +|+|+||+.+++.
T Consensus 1041 gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~ 1120 (1389)
T TIGR03443 1041 GDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVN 1120 (1389)
T ss_pred ccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccc
Confidence 999999999999999999899999999999998888888887788887 7999999754421
Q ss_pred ---------CCCccCcCCCC--CCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 ---------RQEIDEVFYPP--PYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ---------~~~~~E~~~~~--p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...+.|+.... +.....+|..+||++|+++.++
T Consensus 1121 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443 1121 LSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred hhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH
Confidence 11234433221 2233467999999999999875
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=188.91 Aligned_cols=142 Identities=35% Similarity=0.637 Sum_probs=115.5
Q ss_pred hhhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHH-HHHHHHHHhhhhhcCcc-----cc
Q psy14522 122 EDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD-ELFEDRLFSRLKAEVPH-----FR 195 (298)
Q Consensus 122 ~~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~~~~l~~~~~~-----~~ 195 (298)
.+.++.++|+|+|||||||||++|++.|++.++++.+|+|++|..+...+.+|+. +......++.++...+. ..
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~ 83 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS 83 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence 4567889999999999999999999999998788899999999988888888885 34444444433332221 12
Q ss_pred CCeEEEecCCCCCCCCCCHHH-HHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCc
Q psy14522 196 SKISVVTGDVSLPGLGLSAAD-RAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAY 259 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~gl~~~~-~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~ 259 (298)
.+++++.||++++.+|++... +..+.+++|+|||+||.+++..++...+++|+.| +|||+||.+
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 689999999999999998655 6778889999999999998887888888889888 799999987
Q ss_pred ccCC
Q psy14522 260 THCP 263 (298)
Q Consensus 260 ~~~~ 263 (298)
+++.
T Consensus 164 vyG~ 167 (491)
T PLN02996 164 VCGE 167 (491)
T ss_pred EecC
Confidence 6643
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=190.80 Aligned_cols=151 Identities=38% Similarity=0.589 Sum_probs=126.4
Q ss_pred hhhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHH-HHHHHHHHhhhhhcCcc-----cc
Q psy14522 122 EDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD-ELFEDRLFSRLKAEVPH-----FR 195 (298)
Q Consensus 122 ~~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~~~~l~~~~~~-----~~ 195 (298)
.+.+++++|+|||||||||||.+|++.|++.++++.+|+|++|.++...+.+|+. +.+...+++.++...+. ..
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 3567889999999999999999999999998888889999999988888888986 44455666666554332 14
Q ss_pred CCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCcc
Q psy14522 196 SKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAYT 260 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~~ 260 (298)
.++.++.||++++.+|++.+.++.+.+++|+|||+|+.+++..++...+++|+.| +|||+||.|+
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 6899999999999999999999999889999999999998888888888999988 6999999988
Q ss_pred cCCC-CCccCcCC
Q psy14522 261 HCPR-QEIDEVFY 272 (298)
Q Consensus 261 ~~~~-~~~~E~~~ 272 (298)
++.. +.+.|..+
T Consensus 272 yG~~~G~i~E~~y 284 (605)
T PLN02503 272 NGQRQGRIMEKPF 284 (605)
T ss_pred ecCCCCeeeeeec
Confidence 7765 35555543
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-21 Score=178.47 Aligned_cols=174 Identities=45% Similarity=0.741 Sum_probs=150.3
Q ss_pred hhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 123 ~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
++.++.+|+|+|||||||+|.-+++.|++..++|.+||.+.|.+.+.++.+|+.......+|+.++..+++...++..+.
T Consensus 6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~ 85 (467)
T KOG1221|consen 6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA 85 (467)
T ss_pred HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence 66788999999999999999999999999978999999999999999999999999988999999998888899999999
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCcccCCCCCc
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAYTHCPRQEI 267 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~~~~~ 267 (298)
||++.+++|++..+...+.+++|+|||+||.+.|.+.+.....+|+.| .++++||.|+......+
T Consensus 86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i 165 (467)
T KOG1221|consen 86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI 165 (467)
T ss_pred ccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence 999999999998888888899999999999999999999888999999 89999999998666666
Q ss_pred cCcCCCCCC--ChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPY--DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~--~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|...+.+. ++...-++.-|+.+.++.+.
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~ 196 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQK 196 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHh
Confidence 666554443 44444455555555555443
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=157.77 Aligned_cols=160 Identities=30% Similarity=0.349 Sum_probs=119.0
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCcccc-CCeEEEecCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFR-SKISVVTGDVSLPG 209 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~-~~v~~v~~Dl~~~~ 209 (298)
+|+|||||||||++++++|+++|+. .+|+|++|..+...+.+++.+.+...... ..... .+++++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~~~~~D~~~~~ 74 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRLW-----QEDLARERIEVVAGDLSEPR 74 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCCC-----CchhhhCCEEEEeCCcCccc
Confidence 5899999999999999999999743 46999999876555556665554321110 00111 58999999999999
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCC--CCccCcCCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPR--QEIDEVFYP 273 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~--~~~~E~~~~ 273 (298)
+|+....+..+.+++|+|||+||.+++..++..+.++|+.| +|+|+||+++.... .+..|+...
T Consensus 75 ~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 75 LGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred CCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence 99998888888899999999999988878888888888877 69999998655432 222333322
Q ss_pred --CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 274 --PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 274 --~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+....++|..+||.+|+++..+
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~ 179 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREA 179 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHH
Confidence 12233467999999999998765
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-18 Score=150.14 Aligned_cols=134 Identities=24% Similarity=0.276 Sum_probs=105.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCC--eEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSK--ISVVTGDVSL 207 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~--v~~v~~Dl~~ 207 (298)
|+||||||+|+||+|.+.+|++.|++ |+++++-..+.. + ...+ ..++.||+.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~---vvV~DNL~~g~~------~----------------~v~~~~~~f~~gDi~D 55 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHE---VVVLDNLSNGHK------I----------------ALLKLQFKFYEGDLLD 55 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCe---EEEEecCCCCCH------H----------------HhhhccCceEEecccc
Confidence 57999999999999999999999988 777776543311 0 0022 6899999999
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCC--cccCCCCC
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTA--YTHCPRQE 266 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~--~~~~~~~~ 266 (298)
.. .+.++++ ++|.|||+||..... ....++++.|+.| +|||-||. ||.+...|
T Consensus 56 ~~------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P 129 (329)
T COG1087 56 RA------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP 129 (329)
T ss_pred HH------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc
Confidence 76 5777765 699999999986544 3344577888888 99999996 66667789
Q ss_pred ccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 267 IDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 267 ~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
++|+.+..|.+||+ .+|++.|++|+..+
T Consensus 130 I~E~~~~~p~NPYG---~sKlm~E~iL~d~~ 157 (329)
T COG1087 130 ISETSPLAPINPYG---RSKLMSEEILRDAA 157 (329)
T ss_pred cCCCCCCCCCCcch---hHHHHHHHHHHHHH
Confidence 99999999988864 56899999998653
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.7e-18 Score=151.71 Aligned_cols=139 Identities=24% Similarity=0.227 Sum_probs=104.1
Q ss_pred eecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCC
Q psy14522 133 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGL 212 (298)
Q Consensus 133 LVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl 212 (298)
|||||+||||++|+++|+++|+ +..|.++++....... ..+ .......++.+|+++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~-~~~-----------------~~~~~~~~~~~Di~d~~--- 58 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFL-KDL-----------------QKSGVKEYIQGDITDPE--- 58 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccc-hhh-----------------hcccceeEEEeccccHH---
Confidence 6999999999999999999985 4568888887543210 000 01133448999999987
Q ss_pred CHHHHHHHhcCccEEEEcCcccCccc--cHHHHhhccccc--------------eEEEEeCCcccCC---CCC---ccCc
Q psy14522 213 SAADRAVLRRNVTVVFHGAATVRFDE--NIKVAIAINIFG--------------SFVHVSTAYTHCP---RQE---IDEV 270 (298)
Q Consensus 213 ~~~~~~~l~~~vd~Vih~A~~~~~~~--~~~~~~~~Nv~g--------------~~v~iSS~~~~~~---~~~---~~E~ 270 (298)
.+.+.++++|+|||+|+.+.... ..+.++++|+.| +|||+||+.+..+ ..+ .+|+
T Consensus 59 ---~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~ 135 (280)
T PF01073_consen 59 ---SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDED 135 (280)
T ss_pred ---HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcC
Confidence 89999999999999999876553 567789999999 9999999865433 222 2444
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
.+ .+......|..+|..||+++.++.
T Consensus 136 ~~-~~~~~~~~Y~~SK~~AE~~V~~a~ 161 (280)
T PF01073_consen 136 TP-YPSSPLDPYAESKALAEKAVLEAN 161 (280)
T ss_pred Cc-ccccccCchHHHHHHHHHHHHhhc
Confidence 43 334467789999999999987764
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-17 Score=145.88 Aligned_cols=145 Identities=23% Similarity=0.239 Sum_probs=109.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+||||+||||++|++.||++||. |...+|++.+....+.+.+. +...+++..+.+||.+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~---V~gtVR~~~~~k~~~~L~~l-------------~~a~~~l~l~~aDL~d 68 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYT---VRGTVRDPEDEKKTEHLRKL-------------EGAKERLKLFKADLLD 68 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCE---EEEEEcCcchhhhHHHHHhc-------------ccCcccceEEeccccc
Confidence 4689999999999999999999999988 99999997653322222221 2234679999999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcccc--HHHHhhccccc---------------eEEEEeCCcccC-------C
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDEN--IKVAIAINIFG---------------SFVHVSTAYTHC-------P 263 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~--~~~~~~~Nv~g---------------~~v~iSS~~~~~-------~ 263 (298)
++ .+...++++|.|||.|.++.+... -.+++++.+.| |+||+||+.+.. +
T Consensus 69 ~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~ 142 (327)
T KOG1502|consen 69 EG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGE 142 (327)
T ss_pred cc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCC
Confidence 98 899999999999999999876533 34677887777 999999974321 2
Q ss_pred CCCccCcCCCCCC---ChHHHHHHHHHHHHHHHh
Q psy14522 264 RQEIDEVFYPPPY---DYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 264 ~~~~~E~~~~~p~---~~y~~yk~sK~~aE~~l~ 294 (298)
...++|+.+..+. .--..|..+|-.||+.-=
T Consensus 143 ~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw 176 (327)
T KOG1502|consen 143 NSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAW 176 (327)
T ss_pred CcccccccCCcHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3357777654432 223679999999998643
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.7e-17 Score=148.85 Aligned_cols=148 Identities=23% Similarity=0.224 Sum_probs=103.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+|||||||||||++|+++|+++|++ |++++|...... ..+...... . ......++.++.+|+.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~--~~~~~~~~~-----~---~~~~~~~~~~~~~Di~ 79 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQT---VIGLDNFSTGYQ--HNLDDVRTS-----V---SEEQWSRFIFIQGDIR 79 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcch--hhhhhhhhc-----c---ccccCCceEEEEccCC
Confidence 56789999999999999999999999876 888988643211 111111000 0 0011246889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCC--cccCCCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTA--YTHCPRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~--~~~~~~~~~ 267 (298)
+.. .+..+++++|+|||+|+..... .+.....++|+.| +|||+||+ |+.....+.
T Consensus 80 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~ 153 (348)
T PRK15181 80 KFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPK 153 (348)
T ss_pred CHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCC
Confidence 865 6788888999999999975432 3334567788887 89999997 443344456
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|+.+..|.+ .|..+|.++|++++..
T Consensus 154 ~e~~~~~p~~---~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 154 IEERIGRPLS---PYAVTKYVNELYADVF 179 (348)
T ss_pred CCCCCCCCCC---hhhHHHHHHHHHHHHH
Confidence 6665555554 4778899999987653
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=139.99 Aligned_cols=140 Identities=24% Similarity=0.285 Sum_probs=104.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|++|||||+||||+++++.+++..++ .+|++++.-.-.. -.+.+... ...++..++++|+++..
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAg-n~~~l~~~--------------~~~~~~~fv~~DI~D~~ 64 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAG-NLENLADV--------------EDSPRYRFVQGDICDRE 64 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccC-CHHHHHhh--------------hcCCCceEEeccccCHH
Confidence 57999999999999999999999665 5678877643210 01111111 12268999999999976
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCC--cccCCC--C
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTA--YTHCPR--Q 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~--~~~~~~--~ 265 (298)
.+.+++. .+|+|+|.|+..+.. .....|+++|+.| ||++|||- ||.... .
T Consensus 65 ------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 65 ------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred ------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCC
Confidence 6888887 599999999987655 3456799999999 89999994 665433 3
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
.++|+++..|.+||+++| ..++.+++
T Consensus 139 ~FtE~tp~~PsSPYSASK---AasD~lVr 164 (340)
T COG1088 139 AFTETTPYNPSSPYSASK---AASDLLVR 164 (340)
T ss_pred CcccCCCCCCCCCcchhh---hhHHHHHH
Confidence 689999999999976655 55666654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-16 Score=144.79 Aligned_cols=146 Identities=19% Similarity=0.186 Sum_probs=98.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++||||||+||||++|+++|++.|++ |++++|...... ..... . .+ ....+++++.+|+++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~---V~~~~r~~~~~~---~~~~~-~-----~~-----~~~~~~~~~~~Dl~d 70 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYA---VNTTVRDPENQK---KIAHL-R-----AL-----QELGDLKIFGADLTD 70 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCE---EEEEECCCCCHH---HHHHH-H-----hc-----CCCCceEEEEcCCCC
Confidence 4789999999999999999999999876 877777643211 11000 0 00 011368899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc--ccHHHHhhccccc---------------eEEEEeCCcccCC------C
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD--ENIKVAIAINIFG---------------SFVHVSTAYTHCP------R 264 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~------~ 264 (298)
.. .+..+++++|+|||+||..... .+...++++|+.| +|||+||..+++. .
T Consensus 71 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~ 144 (338)
T PLN00198 71 EE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTG 144 (338)
T ss_pred hH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCC
Confidence 76 6788888999999999975432 2233455677766 8999999744331 2
Q ss_pred CCccCcCCC------CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYP------PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~------~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+... .+..+...|..+|+++|+++...
T Consensus 145 ~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 182 (338)
T PLN00198 145 LVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKF 182 (338)
T ss_pred ceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHH
Confidence 245554211 11223445888999999988753
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-16 Score=142.89 Aligned_cols=147 Identities=20% Similarity=0.285 Sum_probs=101.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|||||||||++++++|+++|++ |++++|+..... ++...... .....+++++.+|+++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~---~~~~~~~~----------~~~~~~~~~~~~Dl~~ 67 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYT---VKATVRDLTDRK---KTEHLLAL----------DGAKERLKLFKADLLE 67 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCCcchH---HHHHHHhc----------cCCCCceEEEecCCCC
Confidence 4789999999999999999999999876 888888654321 22111110 0112478899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc--ccHHHHhhccccc---------------eEEEEeCCcc--cCC-----
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD--ENIKVAIAINIFG---------------SFVHVSTAYT--HCP----- 263 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g---------------~~v~iSS~~~--~~~----- 263 (298)
+. .+..+++++|+|||+|+..... .+...++++|+.| +|||+||... ++.
T Consensus 68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~ 141 (322)
T PLN02986 68 ES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEA 141 (322)
T ss_pred cc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCC
Confidence 87 7888888999999999975432 2233455666655 8999999643 221
Q ss_pred CCCccCcCCCCCC---ChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPY---DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~---~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+++|+.+..|. .+...|..+|..+|+++.+.
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~ 177 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF 177 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHH
Confidence 2246676554332 23356889999999987654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5e-16 Score=140.88 Aligned_cols=122 Identities=23% Similarity=0.205 Sum_probs=91.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||+++++.|++.| + |++++|... .+.+|+++..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~~--------------------------------~~~~Dl~d~~ 44 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHST--------------------------------DYCGDFSNPE 44 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEeccccc--------------------------------cccCCCCCHH
Confidence 579999999999999999999987 5 777777421 2357888865
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCC--CCCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCP--RQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--~~~~~E 269 (298)
.+.++++ ++|+|||+|+..... ......+.+|+.| +|||+||.++++. ..+++|
T Consensus 45 ------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E 118 (299)
T PRK09987 45 ------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQE 118 (299)
T ss_pred ------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCC
Confidence 6777666 589999999986533 2334455677776 9999999765543 347888
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+..|.++ |..+|+.+|+++...
T Consensus 119 ~~~~~P~~~---Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 119 TDATAPLNV---YGETKLAGEKALQEH 142 (299)
T ss_pred CCCCCCCCH---HHHHHHHHHHHHHHh
Confidence 877666665 667889999998654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-16 Score=141.87 Aligned_cols=146 Identities=19% Similarity=0.245 Sum_probs=100.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+|||||||||||++++++|+++|++ |++++|+..... ....... . .....+++++.+|+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~---V~~~~r~~~~~~---~~~~~~~---------~-~~~~~~~~~~~~Dl~~ 66 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYT---VKATVRDPNDPK---KTEHLLA---------L-DGAKERLHLFKANLLE 66 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCE---EEEEEcCCCchh---hHHHHHh---------c-cCCCCceEEEeccccC
Confidence 4689999999999999999999999876 888888643211 1111100 0 0112478899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc--ccHHHHhhccccc---------------eEEEEeCCc--ccCC-----
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD--ENIKVAIAINIFG---------------SFVHVSTAY--THCP----- 263 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g---------------~~v~iSS~~--~~~~----- 263 (298)
+. .+..+++++|+|||+|+..... .+....+++|+.| +|||+||.. +++.
T Consensus 67 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~ 140 (322)
T PLN02662 67 EG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTP 140 (322)
T ss_pred cc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCC
Confidence 87 6888889999999999975422 2223556667666 899999963 2221
Q ss_pred CCCccCcCCCCCC---ChHHHHHHHHHHHHHHHhh
Q psy14522 264 RQEIDEVFYPPPY---DYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 264 ~~~~~E~~~~~p~---~~y~~yk~sK~~aE~~l~~ 295 (298)
..+++|+.+..|. .....|..+|+++|+++..
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~ 175 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWK 175 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHH
Confidence 1246676554442 1124688999999998764
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6e-16 Score=154.53 Aligned_cols=147 Identities=30% Similarity=0.368 Sum_probs=107.7
Q ss_pred ceeeecCCCCCCchhHHHHHHH--hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLR--ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~--~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
|+|||||||||||++++++|++ .|+ +|++++|.... .++...... + ...+++++.+|+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~~~----~~~~~~~~~-----~------~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQSL----SRLEALAAY-----W------GADRVVPLVGDLTE 62 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcchH----HHHHHHHHh-----c------CCCcEEEEecccCC
Confidence 5799999999999999999995 444 49999995431 222221110 0 01578999999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCC-CCCccCcCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCP-RQEIDEVFY 272 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~-~~~~~E~~~ 272 (298)
+.+++....+..+ +++|+|||+||..+.........++|+.| +|||+||+.+++. ..++.|+..
T Consensus 63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~ 141 (657)
T PRK07201 63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDF 141 (657)
T ss_pred ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccc
Confidence 8888887778777 89999999999887766677777888877 8999999855442 234555544
Q ss_pred CCCCChHHHHHHHHHHHHHHHhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+..+...|..+||.+|+++.+
T Consensus 142 ~~~~~~~~~Y~~sK~~~E~~~~~ 164 (657)
T PRK07201 142 DEGQGLPTPYHRTKFEAEKLVRE 164 (657)
T ss_pred hhhcCCCCchHHHHHHHHHHHHH
Confidence 33333345688999999999874
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.7e-16 Score=141.74 Aligned_cols=146 Identities=18% Similarity=0.179 Sum_probs=97.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||++++++|++.|++ |++++|...... .+++...... . ......+++++.+|+++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~d~~ 68 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE---VHGLIRRSSSFN-TQRIEHIYED-----P---HNVNKARMKLHYGDLTDSS 68 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE---EEEEecCCcccc-hhhhhhhhhc-----c---ccccccceeEEEeccCCHH
Confidence 58999999999999999999999876 888888753210 1122211100 0 0011246889999999876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCccc---cHHHHhhccccc-----------------eEEEEeCC--cccCCCC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFDE---NIKVAIAINIFG-----------------SFVHVSTA--YTHCPRQ 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~---~~~~~~~~Nv~g-----------------~~v~iSS~--~~~~~~~ 265 (298)
.+..+++ ++|+|||+|+...... ......++|+.| +|||+||. |+.....
T Consensus 69 ------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~ 142 (343)
T TIGR01472 69 ------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI 142 (343)
T ss_pred ------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC
Confidence 6777776 4799999999754321 122334455544 68999997 4433334
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++.|+.+..|.+ .|..+|+.+|.+++..
T Consensus 143 ~~~E~~~~~p~~---~Y~~sK~~~e~~~~~~ 170 (343)
T TIGR01472 143 PQNETTPFYPRS---PYAAAKLYAHWITVNY 170 (343)
T ss_pred CCCCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 577777655555 4777899999998654
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.1e-16 Score=140.76 Aligned_cols=147 Identities=22% Similarity=0.304 Sum_probs=102.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+||||||+||||+++++.|+++|++ |++++|+..... ....... . .....+++++.+|+++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~---V~~~~r~~~~~~---~~~~~~~---------~-~~~~~~~~~~~~D~~d 67 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYT---INATVRDPKDRK---KTDHLLA---------L-DGAKERLKLFKADLLD 67 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCCcchh---hHHHHHh---------c-cCCCCceEEEeCCCCC
Confidence 4689999999999999999999999876 777777643211 1111110 0 0112468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccC-------
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHC------- 262 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~------- 262 (298)
.. .+..+++++|+|||+||..... ..+...+++|+.| +||++||+.+..
T Consensus 68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 68 EG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred ch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCC
Confidence 86 6888888999999999965322 2344556677766 899999974321
Q ss_pred CCCCccCcCCCCCCC---hHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYD---YKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~---~y~~yk~sK~~aE~~l~~~ 296 (298)
...+++|+.+..|.. +...|..+|+.+|+++...
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~ 178 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRF 178 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHH
Confidence 123467776655432 2356889999999998653
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=140.71 Aligned_cols=145 Identities=20% Similarity=0.202 Sum_probs=101.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+|+||||+||||++++++|+++|++ |++++|...... ...+.. + .....+++++.+|++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~~---------~----~~~~~~~~~~~~Dl~ 70 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYT---VKGTVRNPDDPK-NTHLRE---------L----EGGKERLILCKADLQ 70 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCchhhh-HHHHHH---------h----hCCCCcEEEEecCcC
Confidence 35789999999999999999999999876 888888643211 000100 0 001136888999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCC---cccCCC---CC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTA---YTHCPR---QE 266 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~---~~~~~~---~~ 266 (298)
+.. .+..+++++|+|||+|+... ..+...+++|+.| +|||+||. |+.... .+
T Consensus 71 d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~ 142 (342)
T PLN02214 71 DYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAV 142 (342)
T ss_pred ChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcc
Confidence 876 78888889999999999753 3455667777776 89999995 332221 24
Q ss_pred ccCcCCCC---CCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPP---PYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~---p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+.. +..+...|..+|+.+|+++...
T Consensus 143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~ 175 (342)
T PLN02214 143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWET 175 (342)
T ss_pred cCcccCCChhhccccccHHHHHHHHHHHHHHHH
Confidence 67765321 2234567899999999998764
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.1e-16 Score=144.29 Aligned_cols=146 Identities=14% Similarity=0.073 Sum_probs=95.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.|+|||||||||||++|++.|+++| ++ |++++|.... ..++... .......+++++.+|+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~---V~~l~r~~~~---~~~l~~~-----------~~~~~~~~~~~~~~Dl~ 75 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHK---VLALDVYNDK---IKHLLEP-----------DTVPWSGRIQFHRINIK 75 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCE---EEEEecCchh---hhhhhcc-----------ccccCCCCeEEEEcCCC
Confidence 45789999999999999999999984 55 8888876321 1111000 00012247899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccCC--CCCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHCP--RQEID 268 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--~~~~~ 268 (298)
+.. .+..+++++|+|||+||.... .....+.+..|+.| +|||+||.++++. ...++
T Consensus 76 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~ 149 (386)
T PLN02427 76 HDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP 149 (386)
T ss_pred ChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCC
Confidence 876 688888899999999997542 12222334456655 8999999744432 22233
Q ss_pred CcCCCCC-------------------CChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYPPP-------------------YDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~~p-------------------~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+..+ ..+...|..+|+++|+++...
T Consensus 150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 196 (386)
T PLN02427 150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAE 196 (386)
T ss_pred cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHH
Confidence 3322110 012346889999999998753
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-15 Score=151.73 Aligned_cols=145 Identities=21% Similarity=0.182 Sum_probs=102.8
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
..+.++|+|||||||||||++|+++|+++ |++ |++++|..... .++ ....+++++.
T Consensus 310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~---V~~l~r~~~~~---~~~-----------------~~~~~~~~~~ 366 (660)
T PRK08125 310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYE---VYGLDIGSDAI---SRF-----------------LGHPRFHFVE 366 (660)
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcE---EEEEeCCchhh---hhh-----------------cCCCceEEEe
Confidence 35678899999999999999999999986 566 99999864310 000 0014688999
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CC
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PR 264 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~ 264 (298)
+|+++.. ..+..+++++|+|||+||.... .......+++|+.+ +|||+||.++++ ..
T Consensus 367 gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~ 441 (660)
T PRK08125 367 GDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTD 441 (660)
T ss_pred ccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCC
Confidence 9999854 1245667899999999997542 23344566777776 999999975443 33
Q ss_pred CCccCcCCC---CCC-ChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYP---PPY-DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~---~p~-~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+. .|. .+-..|..+|+++|+++...
T Consensus 442 ~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~ 477 (660)
T PRK08125 442 KYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY 477 (660)
T ss_pred CCcCccccccccCCCCCCccchHHHHHHHHHHHHHH
Confidence 467777643 122 23346889999999999764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-15 Score=138.86 Aligned_cols=147 Identities=22% Similarity=0.281 Sum_probs=98.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..++||||||+||||++++++|++.|++ |++++|..... ..+..... .+....++.++.+|+++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~---V~~~~r~~~~~---~~~~~~~~----------~~~~~~~~~~v~~Dl~d 67 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPANV---KKVKHLLD----------LPGATTRLTLWKADLAV 67 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCE---EEEEEcCcchh---HHHHHHHh----------ccCCCCceEEEEecCCC
Confidence 3678999999999999999999999876 88888864321 11111110 00111368899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc--ccHHHHhhccccc---------------eEEEEeCCcccC---CCCC-
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD--ENIKVAIAINIFG---------------SFVHVSTAYTHC---PRQE- 266 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g---------------~~v~iSS~~~~~---~~~~- 266 (298)
.. .+..+++++|+|||+|+..... .+....+++|+.| +|||+||..+.. ...+
T Consensus 68 ~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~ 141 (351)
T PLN02650 68 EG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPV 141 (351)
T ss_pred hh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCc
Confidence 76 6788888999999999975432 2233566777776 799999974322 1122
Q ss_pred ccCcCCC------CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYP------PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~------~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+... .+..+...|..+|+.+|+++...
T Consensus 142 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (351)
T PLN02650 142 YDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177 (351)
T ss_pred cCcccCCchhhhhccccccchHHHHHHHHHHHHHHH
Confidence 4565321 11122346889999999988654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-15 Score=138.28 Aligned_cols=138 Identities=18% Similarity=0.211 Sum_probs=94.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC-C
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS-L 207 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~-~ 207 (298)
|+|||||||||||++|+++|++. |++ |++++|... +..... ...+++++.+|+. +
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~---V~~~~r~~~------~~~~~~--------------~~~~~~~~~~Dl~~~ 58 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWE---VYGMDMQTD------RLGDLV--------------NHPRMHFFEGDITIN 58 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCe---EEEEeCcHH------HHHHhc--------------cCCCeEEEeCCCCCC
Confidence 57999999999999999999986 455 898887532 111100 0146889999997 4
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDE 269 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E 269 (298)
.. .+..+++++|+|||+||.... ..+....+++|+.| +|||+||..+++ ...++.|
T Consensus 59 ~~------~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~e 132 (347)
T PRK11908 59 KE------WIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDP 132 (347)
T ss_pred HH------HHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCc
Confidence 33 566777899999999996432 23334445666655 999999974443 3334555
Q ss_pred cCCC---CC-CChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYP---PP-YDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~---~p-~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+... .| ..+...|..+|+.+|+++...
T Consensus 133 e~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~ 163 (347)
T PRK11908 133 EASPLVYGPINKPRWIYACSKQLMDRVIWAY 163 (347)
T ss_pred cccccccCcCCCccchHHHHHHHHHHHHHHH
Confidence 5432 12 234556889999999998754
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-15 Score=136.50 Aligned_cols=137 Identities=26% Similarity=0.289 Sum_probs=104.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+||||+||||+++++.|+++|++ |+++.|...... .+ ...+++++.+|+.+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~---~~------------------~~~~~~~~~~D~~~~~ 56 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEE---VRVLVRPTSDRR---NL------------------EGLDVEIVEGDLRDPA 56 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCE---EEEEEecCcccc---cc------------------ccCCceEEEeeCCCHH
Confidence 47999999999999999999999876 899998643210 00 0136788999999876
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc--------------eEEEEeCCcccC---CCCCccCcC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG--------------SFVHVSTAYTHC---PRQEIDEVF 271 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~---~~~~~~E~~ 271 (298)
.+..+++++|+|||+|+.... ...+...+++|+.+ +||++||.++++ ...+++|+.
T Consensus 57 ------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~ 130 (328)
T TIGR03466 57 ------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETT 130 (328)
T ss_pred ------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccC
Confidence 788888899999999986532 24455666777766 899999975543 234677877
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 272 YPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 272 ~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+..|....+.|..+|+.+|++++++
T Consensus 131 ~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 131 PSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred CCCcccccChHHHHHHHHHHHHHHH
Confidence 6666555667999999999998765
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-15 Score=140.98 Aligned_cols=151 Identities=18% Similarity=0.138 Sum_probs=96.1
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-ch-------------hHHHHHHHHHHHHhhhhhc
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-TV-------------SERLDELFEDRLFSRLKAE 190 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-~~-------------~~rl~~~~~~~~~~~l~~~ 190 (298)
...++|+||||||+||||++|+++|+++|++ |++++|..... .. .+++.....
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------- 109 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYE---VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---------- 109 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeccccccccccccccccccccchHHHHHHHHH----------
Confidence 3457889999999999999999999999877 77765432110 00 011111000
Q ss_pred CccccCCeEEEecCCCCCCCCCCHHHHHHHhc--CccEEEEcCcccCccc------cHHHHhhccccc------------
Q psy14522 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFDE------NIKVAIAINIFG------------ 250 (298)
Q Consensus 191 ~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~------~~~~~~~~Nv~g------------ 250 (298)
....+++++.+|+++.. .+..+++ ++|+|||+|+...... .....+++|+.|
T Consensus 110 --~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g 181 (442)
T PLN02572 110 --VSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA 181 (442)
T ss_pred --hhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 01146889999999876 6777766 5899999998643221 122345678877
Q ss_pred ---eEEEEeCCcccCC-CCCccCc-----------CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ---SFVHVSTAYTHCP-RQEIDEV-----------FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ---~~v~iSS~~~~~~-~~~~~E~-----------~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|||+||..+++. ..+++|. ....|..+.+.|..+|+++|.+++..
T Consensus 182 v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~ 242 (442)
T PLN02572 182 PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 242 (442)
T ss_pred CCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHH
Confidence 6999999754432 1223322 21123344455778889999988654
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8e-15 Score=135.12 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=97.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+||||||+||||++++++|+++|++ |+++.|...... ..++..... .......++.++.+|++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYE---VHGIIRRSSNFN-TQRLDHIYI---------DPHPNKARMKLHYGDLS 70 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEeccccccc-ccchhhhcc---------ccccccCceEEEEecCC
Confidence 45789999999999999999999999876 888888643210 011111100 00011246889999999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------------eEEEEeCC--cc
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------------SFVHVSTA--YT 260 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------------~~v~iSS~--~~ 260 (298)
+.. .+..+++ .+|+|||+|+..... ......+++|+.| +|||+||. |+
T Consensus 71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg 144 (340)
T PLN02653 71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYG 144 (340)
T ss_pred CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhC
Confidence 876 6666665 479999999975432 2223344566655 48889986 44
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.... ++.|+.+..|.+ .|..+|+.+|++++..
T Consensus 145 ~~~~-~~~E~~~~~p~~---~Y~~sK~~~e~~~~~~ 176 (340)
T PLN02653 145 STPP-PQSETTPFHPRS---PYAVAKVAAHWYTVNY 176 (340)
T ss_pred CCCC-CCCCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 3332 677776655544 5778889999988654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=133.86 Aligned_cols=146 Identities=17% Similarity=0.147 Sum_probs=100.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+++|+|||||||||++++++|+++|++ |++++|...... ...++.... .....++.++.+|+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~D~ 67 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVKELA------------GDLGDNLVFHKVDL 67 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCcchHHHHHHHHHhh------------cccCccceEEecCc
Confidence 35789999999999999999999999866 888877532211 111111110 01124678899999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCccc--CCC
Q psy14522 206 SLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTH--CPR 264 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~ 264 (298)
.++. .+..+++ ++|+|||+|+..... ......+++|+.+ +|||+||+.++ ...
T Consensus 68 ~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~ 141 (352)
T PLN02240 68 RDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEE 141 (352)
T ss_pred CCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCC
Confidence 8875 6666654 689999999965322 3444566677665 89999997433 334
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|. ..|..+|+.+|++++.+
T Consensus 142 ~~~~E~~~~~~~---~~Y~~sK~~~e~~~~~~ 170 (352)
T PLN02240 142 VPCTEEFPLSAT---NPYGRTKLFIEEICRDI 170 (352)
T ss_pred CCCCCCCCCCCC---CHHHHHHHHHHHHHHHH
Confidence 567887765554 46788999999998753
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.4e-15 Score=135.92 Aligned_cols=143 Identities=23% Similarity=0.201 Sum_probs=98.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
|+++|+||||||+||||+++++.|++.|++ |++++|....... ....+. ...++.++.+|+
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~---~~~~~~-------------~~~~~~~~~~Dl 61 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGAE---VYGYSLDPPTSPN---LFELLN-------------LAKKIEDHFGDI 61 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCCE---EEEEeCCCccchh---HHHHHh-------------hcCCceEEEccC
Confidence 356899999999999999999999999877 8888887542211 111000 013577889999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccCC--
Q psy14522 206 SLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHCP-- 263 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~-- 263 (298)
++.. .+..+++ ++|+|||+||..... .+....+++|+.| +|||+||..+++.
T Consensus 62 ~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~ 135 (349)
T TIGR02622 62 RDAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDE 135 (349)
T ss_pred CCHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCC
Confidence 9875 6777766 479999999964322 2334556677666 7999999744432
Q ss_pred -CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 -RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 -~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..++.|+.+..|.++ |..+|..+|.+++..
T Consensus 136 ~~~~~~e~~~~~p~~~---Y~~sK~~~e~~~~~~ 166 (349)
T TIGR02622 136 WVWGYRETDPLGGHDP---YSSSKACAELVIASY 166 (349)
T ss_pred CCCCCccCCCCCCCCc---chhHHHHHHHHHHHH
Confidence 235667665555554 566788888887653
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.9e-15 Score=136.32 Aligned_cols=144 Identities=24% Similarity=0.250 Sum_probs=95.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++||||||+||||++++++|+++|++ |+++.|+... ..++...+ ....+++++.+|+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~---V~~~~r~~~~---~~~~~~~~-------------~~~~~~~~~~~Dl~~ 69 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT---VHATLRDPAK---SLHLLSKW-------------KEGDRLRLFRADLQE 69 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHhh-------------ccCCeEEEEECCCCC
Confidence 4789999999999999999999999876 8888886321 11111110 012468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccc-----cHHHHh-----hccccc---------------eEEEEeCCcccC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDE-----NIKVAI-----AINIFG---------------SFVHVSTAYTHC 262 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~-----~~~~~~-----~~Nv~g---------------~~v~iSS~~~~~ 262 (298)
.. .+..+++++|+|||+||..+... +....+ ++|+.| +|||+||..+++
T Consensus 70 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg 143 (353)
T PLN02896 70 EG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT 143 (353)
T ss_pred HH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence 76 68888889999999999754321 222222 223333 899999974433
Q ss_pred C-------CCCccCcCCCC------CCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 P-------RQEIDEVFYPP------PYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~-------~~~~~E~~~~~------p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. ..+++|+.+.+ +..+...|..+|+++|+++...
T Consensus 144 ~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 190 (353)
T PLN02896 144 AKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKY 190 (353)
T ss_pred ccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHH
Confidence 1 12456653211 1112236889999999998764
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.58 E-value=8e-15 Score=139.52 Aligned_cols=139 Identities=22% Similarity=0.302 Sum_probs=95.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+.|+|+|||||||||++|+++|+++|++ |++++|..... ...+... ....+++++.+|+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~---V~~ldr~~~~~--~~~~~~~--------------~~~~~~~~~~~Di~~ 179 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE---VIVIDNFFTGR--KENLVHL--------------FGNPRFELIRHDVVE 179 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcc--HhHhhhh--------------ccCCceEEEECcccc
Confidence 4689999999999999999999999877 88888753211 1111100 001367888888866
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDE 269 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E 269 (298)
.. +.++|+|||+|+.... ..+....+++|+.| +|||+||.++++ ...+++|
T Consensus 180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E 248 (436)
T PLN02166 180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKE 248 (436)
T ss_pred cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCc
Confidence 43 2479999999997542 23445667788887 899999975443 3345667
Q ss_pred cCC--CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFY--PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~--~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.. ..|..+-..|..+|+.+|+++...
T Consensus 249 ~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y 277 (436)
T PLN02166 249 TYWGNVNPIGERSCYDEGKRTAETLAMDY 277 (436)
T ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence 632 123333445788899999998754
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.1e-15 Score=139.37 Aligned_cols=140 Identities=21% Similarity=0.301 Sum_probs=96.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+|||||||||||++|++.|+++|++ |++++|..... .+.+...+ ...+++++.+|+.
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~---V~~ld~~~~~~--~~~~~~~~--------------~~~~~~~i~~D~~ 177 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDS---VIVVDNFFTGR--KENVMHHF--------------SNPNFELIRHDVV 177 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCE---EEEEeCCCccc--hhhhhhhc--------------cCCceEEEECCcc
Confidence 35789999999999999999999999877 88887653211 11111100 1146788889986
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEID 268 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~ 268 (298)
++. +.++|+|||+|+.... ..+....+++|+.| +|||+||.++++ ...+..
T Consensus 178 ~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~ 246 (442)
T PLN02206 178 EPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQV 246 (442)
T ss_pred Chh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCC
Confidence 643 2479999999996532 23455677888887 999999975443 334566
Q ss_pred CcCC--CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFY--PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~--~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.. ..|..+...|..+|+.+|+++...
T Consensus 247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y 276 (442)
T PLN02206 247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDY 276 (442)
T ss_pred ccccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 6542 234444567889999999988653
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=136.09 Aligned_cols=138 Identities=16% Similarity=0.078 Sum_probs=92.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+|||||||||+++++.|+++|++ |++++|...... . .......++.+|+.+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~---V~~v~r~~~~~~-----~----------------~~~~~~~~~~~Dl~d 75 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY---IIASDWKKNEHM-----S----------------EDMFCHEFHLVDLRV 75 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE---EEEEEecccccc-----c----------------cccccceEEECCCCC
Confidence 5789999999999999999999999877 888888532100 0 000134678899987
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc---c-ccHHHHhhccccc--------------eEEEEeCCcccCCC-----
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF---D-ENIKVAIAINIFG--------------SFVHVSTAYTHCPR----- 264 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~-~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~----- 264 (298)
.. .+..++.++|+|||+|+.+.. . ......+..|+.+ +|||+||...++..
T Consensus 76 ~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~ 149 (370)
T PLN02695 76 ME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLET 149 (370)
T ss_pred HH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCc
Confidence 65 677777889999999986531 1 1223334455554 89999997444322
Q ss_pred -CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 -QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 -~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.++.|+.. .|..+...|..+|..+|+++...
T Consensus 150 ~~~~~E~~~-~p~~p~s~Yg~sK~~~E~~~~~~ 181 (370)
T PLN02695 150 NVSLKESDA-WPAEPQDAYGLEKLATEELCKHY 181 (370)
T ss_pred CCCcCcccC-CCCCCCCHHHHHHHHHHHHHHHH
Confidence 13555431 12333446778899999987653
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-14 Score=132.55 Aligned_cols=141 Identities=20% Similarity=0.234 Sum_probs=92.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|||||||||||+++++.|+++|+++ |.++.|..... ....+... ....++.++.+|+++..
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~--v~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~Dl~d~~ 64 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDA--VVVVDKLTYAG-NLMSLAPV--------------AQSERFAFEKVDICDRA 64 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCE--EEEEecCcccc-chhhhhhc--------------ccCCceEEEECCCcChH
Confidence 589999999999999999999998662 44444432211 01111100 01136788899999876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-----------------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-----------------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------------~~v~iSS~~~~ 261 (298)
.+..+++ ++|+|||+||..... ..+..++++|+.| +||++||...+
T Consensus 65 ------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vy 138 (355)
T PRK10217 65 ------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVY 138 (355)
T ss_pred ------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhc
Confidence 6777766 489999999976432 2334455555533 68999996333
Q ss_pred C----CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 C----PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~----~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+ ...+++|+.+..|.+ .|..+|+.+|.++...
T Consensus 139 g~~~~~~~~~~E~~~~~p~s---~Y~~sK~~~e~~~~~~ 174 (355)
T PRK10217 139 GDLHSTDDFFTETTPYAPSS---PYSASKASSDHLVRAW 174 (355)
T ss_pred CCCCCCCCCcCCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 2 223577876655655 4667889999888754
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-14 Score=129.64 Aligned_cols=132 Identities=28% Similarity=0.341 Sum_probs=97.7
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
.|||||||||||++|++.|+++|++ |+.++|....... .. ..+.++.+|+++..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~---V~~~~r~~~~~~~---------------------~~-~~~~~~~~d~~~~~- 55 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHD---VRGLDRLRDGLDP---------------------LL-SGVEFVVLDLTDRD- 55 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCe---EEEEeCCCccccc---------------------cc-cccceeeecccchH-
Confidence 4999999999999999999999888 8999986542110 00 35788899988864
Q ss_pred CCCHHHHHHHhcCc-cEEEEcCcccCcccc----HHHHhhccccc--------------eEEEEeCCcccC---CCCCcc
Q psy14522 211 GLSAADRAVLRRNV-TVVFHGAATVRFDEN----IKVAIAINIFG--------------SFVHVSTAYTHC---PRQEID 268 (298)
Q Consensus 211 gl~~~~~~~l~~~v-d~Vih~A~~~~~~~~----~~~~~~~Nv~g--------------~~v~iSS~~~~~---~~~~~~ 268 (298)
....+...+ |+|||+|+....... ...++.+|+.| +|||.||.++.. ...+++
T Consensus 56 -----~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~ 130 (314)
T COG0451 56 -----LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPID 130 (314)
T ss_pred -----HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcc
Confidence 566666777 999999998764433 33477888887 999977754332 223677
Q ss_pred Cc-CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EV-FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~-~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+ .+..|.+ .|..+|+.+|+++...
T Consensus 131 E~~~~~~p~~---~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 131 EDLGPPRPLN---PYGVSKLAAEQLLRAY 156 (314)
T ss_pred cccCCCCCCC---HHHHHHHHHHHHHHHH
Confidence 87 3444444 7899999999998765
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-14 Score=126.14 Aligned_cols=133 Identities=26% Similarity=0.364 Sum_probs=98.2
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|||||||||||++++++|+++|+. |+.+.|+......... ..++.++.+|+.+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~---v~~~~~~~~~~~~~~~--------------------~~~~~~~~~dl~~~~-- 55 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE---VIVLSRSSNSESFEEK--------------------KLNVEFVIGDLTDKE-- 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE---EEEEESCSTGGHHHHH--------------------HTTEEEEESETTSHH--
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc---cccccccccccccccc--------------------cceEEEEEeeccccc--
Confidence 799999999999999999999876 7788887653211100 037899999999765
Q ss_pred CCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCccc--CCCCCccCc
Q psy14522 212 LSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEIDEV 270 (298)
Q Consensus 212 l~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~~E~ 270 (298)
.+..+++. +|+|||+|+.... .......++.|+.+ ++||+||...+ ....+++|+
T Consensus 56 ----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~ 131 (236)
T PF01370_consen 56 ----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED 131 (236)
T ss_dssp ----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT
T ss_pred ----cccccccccCceEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 77777775 5999999997531 13445566667666 99999997444 444567887
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.++ |..+|+.+|++++..
T Consensus 132 ~~~~~~~~---Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 132 SPINPLSP---YGASKRAAEELLRDY 154 (236)
T ss_dssp SGCCHSSH---HHHHHHHHHHHHHHH
T ss_pred cccccccc---ccccccccccccccc
Confidence 76655554 778899999998764
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.3e-14 Score=130.73 Aligned_cols=141 Identities=20% Similarity=0.225 Sum_probs=91.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++++++|+++|.+ .|+++.|.... .....+... ....+++++.+|+++..
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~Dl~d~~ 63 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYA-GNLESLADV--------------SDSERYVFEHADICDRA 63 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCcc-chHHHHHhc--------------ccCCceEEEEecCCCHH
Confidence 47999999999999999999999865 25555543211 001111100 00145788999999875
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-----------------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-----------------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------------~~v~iSS~~~~ 261 (298)
.+.++++ ++|+|||+||..... .....++++|+.| +|||+||.+.+
T Consensus 64 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (352)
T PRK10084 64 ------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY 137 (352)
T ss_pred ------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence 6666665 589999999975432 2344566666654 48999996443
Q ss_pred CCC------------CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPR------------QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~------------~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.. .++.|+.+..|. +.|..+|+.+|+++...
T Consensus 138 g~~~~~~~~~~~~~~~~~~E~~~~~p~---~~Y~~sK~~~E~~~~~~ 181 (352)
T PRK10084 138 GDLPHPDEVENSEELPLFTETTAYAPS---SPYSASKASSDHLVRAW 181 (352)
T ss_pred CCCCccccccccccCCCccccCCCCCC---ChhHHHHHHHHHHHHHH
Confidence 321 135566554444 45788899999988754
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.9e-14 Score=128.97 Aligned_cols=142 Identities=20% Similarity=0.182 Sum_probs=95.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||+++++.|+++|++ |+++.|...... ..+... .. ....++.++.+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~~~~~~~~--~~~~~~-~~-----------~~~~~~~~~~~Dl~d~~ 63 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VVILDNLCNSKR--SVLPVI-ER-----------LGGKHPTFVEGDIRNEA 63 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCe---EEEEecCCCchH--hHHHHH-HH-----------hcCCCceEEEccCCCHH
Confidence 57999999999999999999999877 777766432111 111110 00 00135678899999865
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCccc--CCCCCcc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEID 268 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~~ 268 (298)
.+..++. ++|+|||+|+..... ......+++|+.+ +||++||..++ ....+++
T Consensus 64 ------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~ 137 (338)
T PRK10675 64 ------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYV 137 (338)
T ss_pred ------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccc
Confidence 5666654 699999999975432 2234456666655 89999997443 3344677
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+.. .+...|..+|..+|+++..+
T Consensus 138 E~~~~~--~p~~~Y~~sK~~~E~~~~~~ 163 (338)
T PRK10675 138 ESFPTG--TPQSPYGKSKLMVEQILTDL 163 (338)
T ss_pred cccCCC--CCCChhHHHHHHHHHHHHHH
Confidence 776541 23456788999999998764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=142.54 Aligned_cols=146 Identities=21% Similarity=0.293 Sum_probs=96.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+.|+|||||||||||+++++.|+++|+. .+|++++|..... ++..... .....+++++.+|+
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~----~~~~l~~-----------~~~~~~v~~~~~Dl 66 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCS----NLKNLNP-----------SKSSPNFKFVKGDI 66 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccc----hhhhhhh-----------cccCCCeEEEECCC
Confidence 456789999999999999999999998543 3488888742111 1111000 01124789999999
Q ss_pred CCCCCCCCHHHHHHHh--cCccEEEEcCcccCccc---cHHHHhhccccc---------------eEEEEeCCcccCCC-
Q psy14522 206 SLPGLGLSAADRAVLR--RNVTVVFHGAATVRFDE---NIKVAIAINIFG---------------SFVHVSTAYTHCPR- 264 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~~---~~~~~~~~Nv~g---------------~~v~iSS~~~~~~~- 264 (298)
++.. .+..++ .++|+|||+|+...... ....++++|+.| +|||+||..+++..
T Consensus 67 ~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 67 ASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140 (668)
T ss_pred CChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCc
Confidence 9875 444443 57999999999865432 233456677665 89999997444322
Q ss_pred -C---CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 -Q---EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 -~---~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. ...|+.+..|.+ .|..+|+.+|+++...
T Consensus 141 ~~~~~~~~E~~~~~p~~---~Y~~sK~~aE~~v~~~ 173 (668)
T PLN02260 141 EDADVGNHEASQLLPTN---PYSATKAGAEMLVMAY 173 (668)
T ss_pred cccccCccccCCCCCCC---CcHHHHHHHHHHHHHH
Confidence 1 124554444444 4778899999998753
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.4e-14 Score=131.93 Aligned_cols=139 Identities=26% Similarity=0.376 Sum_probs=105.2
Q ss_pred hhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 123 ~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+..+..+|+|+||||+|.||+.+++++++.++ ++++.+.|++... -.++..+... .+ ..++.++.
T Consensus 244 i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~---~~i~~el~~~--------~~--~~~~~~~i 308 (588)
T COG1086 244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKL---YLIDMELREK--------FP--ELKLRFYI 308 (588)
T ss_pred HHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHH---HHHHHHHHhh--------CC--CcceEEEe
Confidence 34568899999999999999999999999964 5799999985432 1222222211 11 36889999
Q ss_pred cCCCCCCCCCCHHHHHHHhcC--ccEEEEcCcccC---ccccHHHHhhccccc--------------eEEEEeCCcccCC
Q psy14522 203 GDVSLPGLGLSAADRAVLRRN--VTVVFHGAATVR---FDENIKVAIAINIFG--------------SFVHVSTAYTHCP 263 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~---~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~ 263 (298)
||+.|.+ .+..++++ +|+|+|.||.-+ ...++.+.+++|+.| +||++||--+.
T Consensus 309 gdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV-- 380 (588)
T COG1086 309 GDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV-- 380 (588)
T ss_pred cccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc--
Confidence 9999987 78899987 999999999754 346777888999999 99999996321
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+|++ .|+.+|.++|+++..++
T Consensus 381 ----------~PtN---vmGaTKr~aE~~~~a~~ 401 (588)
T COG1086 381 ----------NPTN---VMGATKRLAEKLFQAAN 401 (588)
T ss_pred ----------CCch---HhhHHHHHHHHHHHHHh
Confidence 3444 56677899999987653
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-14 Score=130.41 Aligned_cols=130 Identities=25% Similarity=0.308 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+||||||+||||++++++|++.|. ..+|++++|.... ...+.+.. ...++.++.+|++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~v~~Dl~ 63 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELK---QWEMQQKF--------------PAPCLRFFIGDVR 63 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhH---HHHHHHHh--------------CCCcEEEEEccCC
Confidence 3578999999999999999999999862 2358888876321 11111110 0146889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCcccCCCCCccC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDE 269 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E 269 (298)
++. .+..+++++|+|||+||.... ..+....+++|+.| +||++||...
T Consensus 64 d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------- 128 (324)
T TIGR03589 64 DKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------- 128 (324)
T ss_pred CHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------
Confidence 876 788888899999999997532 22334567888887 8999999532
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..|. +.|..+|+.+|+++..
T Consensus 129 ---~~p~---~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 129 ---ANPI---NLYGATKLASDKLFVA 148 (324)
T ss_pred ---CCCC---CHHHHHHHHHHHHHHH
Confidence 1233 3477789999998764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.1e-14 Score=128.19 Aligned_cols=146 Identities=14% Similarity=0.143 Sum_probs=98.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|||||||||++++++|+++|++ |++++|+.......+.+.. + .....+++++.+|+++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~---V~~~~R~~~~~~~~~~~~~---------l----~~~~~~~~~~~~Dl~d 68 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYT---VHAAVQKNGETEIEKEIRG---------L----SCEEERLKVFDVDPLD 68 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEEcCchhhhHHHHHHh---------c----ccCCCceEEEEecCCC
Confidence 3678999999999999999999999877 8888885332111111111 0 0012468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc---------------eEEEEeCCccc--C-----CC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG---------------SFVHVSTAYTH--C-----PR 264 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g---------------~~v~iSS~~~~--~-----~~ 264 (298)
.. .+...+.++|.|+|.++... ....+...+++|+.| +||++||+.+. . ..
T Consensus 69 ~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~ 142 (297)
T PLN02583 69 YH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQ 142 (297)
T ss_pred HH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCC
Confidence 76 67888889999999876543 222345667777777 89999997432 2 11
Q ss_pred CCccCcCCCCCC---ChHHHHHHHHHHHHHHHhh
Q psy14522 265 QEIDEVFYPPPY---DYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 265 ~~~~E~~~~~p~---~~y~~yk~sK~~aE~~l~~ 295 (298)
.+++|+.+..+. .....|..+|..+|+++..
T Consensus 143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~ 176 (297)
T PLN02583 143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWA 176 (297)
T ss_pred CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHH
Confidence 245665443221 1112699999999999854
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.4e-14 Score=124.52 Aligned_cols=119 Identities=24% Similarity=0.298 Sum_probs=94.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||++|.+|.+|++.|. .+.+ |+.+.|.. .|+++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~---v~a~~~~~------------------------------------~Ditd~~ 40 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFE---VIATDRAE------------------------------------LDITDPD 40 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCce---EEeccCcc------------------------------------ccccChH
Confidence 459999999999999999987 4355 88877641 6888876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCCC--CCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCPR--QEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~~--~~~~E 269 (298)
.+.++++ ++|+|||+|+.++.. ...+..+.+|..| ++||+||-|++... .++.|
T Consensus 41 ------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E 114 (281)
T COG1091 41 ------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKE 114 (281)
T ss_pred ------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCC
Confidence 6777766 589999999987654 4456677889888 89999999887543 47999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
++.+.|.+ .|+.+|++.|+.+..+.
T Consensus 115 ~D~~~P~n---vYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 115 TDTPNPLN---VYGRSKLAGEEAVRAAG 139 (281)
T ss_pred CCCCCChh---hhhHHHHHHHHHHHHhC
Confidence 88777655 67888999999997764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.7e-14 Score=126.84 Aligned_cols=141 Identities=24% Similarity=0.301 Sum_probs=95.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|+|||||||||++++++|++.|.. .+|+++.|...... .+++.... ...+++++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~~~~- 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLADLE--------------DNPRYRFVKGDIGDRE- 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhhhhc--------------cCCCcEEEEcCCcCHH-
Confidence 5899999999999999999998632 34888876422110 11111110 0146788999999876
Q ss_pred CCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccCC--C-CCc
Q psy14522 211 GLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHCP--R-QEI 267 (298)
Q Consensus 211 gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~--~-~~~ 267 (298)
.+..+++. +|+|||+|+..... .....++++|+.| ++||+||.+.++. . .++
T Consensus 64 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~ 138 (317)
T TIGR01181 64 -----LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF 138 (317)
T ss_pred -----HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc
Confidence 67777776 99999999976432 2344455666655 8999999744332 2 256
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|..+..|. +.|..+|+.+|.+++.+
T Consensus 139 ~e~~~~~~~---~~Y~~sK~~~e~~~~~~ 164 (317)
T TIGR01181 139 TETTPLAPS---SPYSASKAASDHLVRAY 164 (317)
T ss_pred CCCCCCCCC---CchHHHHHHHHHHHHHH
Confidence 776655454 45778889999988754
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=4e-14 Score=125.71 Aligned_cols=143 Identities=23% Similarity=0.246 Sum_probs=103.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC-ccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK-GKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~-~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.++||||||+||||+|.+-+|+++|+. |++++.-.. -.....|.++... ...++.++.+|++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~---v~~vDNl~n~~~~sl~r~~~l~~-------------~~~~v~f~~~Dl~D 65 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYG---VVIVDNLNNSYLESLKRVRQLLG-------------EGKSVFFVEGDLND 65 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCc---EEEEecccccchhHHHHHHHhcC-------------CCCceEEEEeccCC
Confidence 578999999999999999999999998 555554321 1234444444322 13789999999999
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCccc---cHHHHhhccccc--------------eEEEEeCC--cccCCCCC
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRFDE---NIKVAIAINIFG--------------SFVHVSTA--YTHCPRQE 266 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~---~~~~~~~~Nv~g--------------~~v~iSS~--~~~~~~~~ 266 (298)
.. .++++++ .+|.|+|.|+.-.... ....+...|+.| .+||.||+ |+.+...|
T Consensus 66 ~~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip 139 (343)
T KOG1371|consen 66 AE------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVP 139 (343)
T ss_pred HH------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceee
Confidence 76 6888876 5899999999754332 223455666666 89999997 66666678
Q ss_pred ccCcCCCC-CCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPP-PYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~-p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+.. |.++ |..+|.+.|.++...
T Consensus 140 ~te~~~t~~p~~p---yg~tK~~iE~i~~d~ 167 (343)
T KOG1371|consen 140 ITEEDPTDQPTNP---YGKTKKAIEEIIHDY 167 (343)
T ss_pred ccCcCCCCCCCCc---chhhhHHHHHHHHhh
Confidence 99988766 5555 556678888887643
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-14 Score=128.61 Aligned_cols=131 Identities=23% Similarity=0.241 Sum_probs=81.2
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|||||||||||++|+++|++.|++ ++++.|...... ... .+..+|+.+..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~---~v~~~~~~~~~~---~~~----------------------~~~~~~~~d~~-- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGT---KFV----------------------NLVDLDIADYM-- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc---eEEEecCCCcch---HHH----------------------hhhhhhhhhhh--
Confidence 799999999999999999999865 555555432110 000 01123333321
Q ss_pred CCHHH-HHHHh-----cCccEEEEcCcccCcc-ccHHHHhhccccc-------------eEEEEeCCcccCC--CCCccC
Q psy14522 212 LSAAD-RAVLR-----RNVTVVFHGAATVRFD-ENIKVAIAINIFG-------------SFVHVSTAYTHCP--RQEIDE 269 (298)
Q Consensus 212 l~~~~-~~~l~-----~~vd~Vih~A~~~~~~-~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--~~~~~E 269 (298)
+.+. +..++ .++|+|||+||..... ......++.|+.+ +|||+||.++++. ..+.+|
T Consensus 52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E 130 (308)
T PRK11150 52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEE 130 (308)
T ss_pred -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCcc
Confidence 0112 23333 2689999999864322 2233456777766 8999999855442 335667
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+..|.+ .|..+|+.+|++++..
T Consensus 131 ~~~~~p~~---~Y~~sK~~~E~~~~~~ 154 (308)
T PRK11150 131 REYEKPLN---VYGYSKFLFDEYVRQI 154 (308)
T ss_pred CCCCCCCC---HHHHHHHHHHHHHHHH
Confidence 66555554 4777889999988764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-14 Score=127.03 Aligned_cols=120 Identities=25% Similarity=0.296 Sum_probs=80.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+|+||++|.+.|.+.|++ |+.+.|. ..|+.+..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~---v~~~~r~------------------------------------~~dl~d~~ 41 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYE---VIATSRS------------------------------------DLDLTDPE 41 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEE---EEEESTT------------------------------------CS-TTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCE---EEEeCch------------------------------------hcCCCCHH
Confidence 68999999999999999999988755 7777653 34666544
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCC--CCCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCP--RQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--~~~~~E 269 (298)
.+..+++ ++|+|||+||..+.. .+.+..+.+|+.+ ++||+||.+++.. ..++.|
T Consensus 42 ------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E 115 (286)
T PF04321_consen 42 ------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTE 115 (286)
T ss_dssp ------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-T
T ss_pred ------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCccccccc
Confidence 5666655 589999999986533 4566677888887 9999999877643 346889
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
++.+.|.+ .|+.+|+.+|+.+.+..
T Consensus 116 ~d~~~P~~---~YG~~K~~~E~~v~~~~ 140 (286)
T PF04321_consen 116 DDPPNPLN---VYGRSKLEGEQAVRAAC 140 (286)
T ss_dssp TS----SS---HHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCC---HHHHHHHHHHHHHHHhc
Confidence 88776665 56778899999988654
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-13 Score=124.12 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||++++++|+++|++ |+++.|.... . +...+.+.. . ....++.++.+|++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~---vi~~~r~~~~--~-~~~~~~l~~--------~--~~~~~~~~~~~Dl~ 77 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAH---VVLAVRNLDK--G-KAAAARITA--------A--TPGADVTLQELDLT 77 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH--H-HHHHHHHHH--------h--CCCCceEEEECCCC
Confidence 46799999999999999999999999866 8888886321 1 111111110 0 01246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-----ccHHHHhhccccc------------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-----ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-----~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+.. .+..++ .++|++|||||..... ..++..+++|+.| +||++|
T Consensus 78 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS 151 (306)
T PRK06197 78 SLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVS 151 (306)
T ss_pred CHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 865 333332 3689999999964321 3445566788776 899999
Q ss_pred CCcccC-CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHC-PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~-~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.. ......+.....+..+...|..+|...+.+.+.
T Consensus 152 S~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 191 (306)
T PRK06197 152 SGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYE 191 (306)
T ss_pred CHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHH
Confidence 974322 111122222122334556788888777766654
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-13 Score=128.17 Aligned_cols=152 Identities=22% Similarity=0.200 Sum_probs=95.9
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...+|+||||||+||||+++++.|+++|++ |+++.|.... .+.+..... +. .......++.++.+|+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~---V~~~~r~~~~---~~~l~~l~~------~~-~~~~~~~~~~~v~~Dl 116 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYS---VRIAVDTQED---KEKLREMEM------FG-EMGRSNDGIWTVMANL 116 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHhh------hc-cccccCCceEEEEcCC
Confidence 356889999999999999999999999877 7777775321 111211100 00 0000013578899999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCccc---cHHHHhhccccc---------------eEEEEeCC----ccc--
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFDE---NIKVAIAINIFG---------------SFVHVSTA----YTH-- 261 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~---~~~~~~~~Nv~g---------------~~v~iSS~----~~~-- 261 (298)
++.. .+..+++++|.|||+|+.++... ....+.++|+.+ +|||+||. |+.
T Consensus 117 ~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~ 190 (367)
T PLN02686 117 TEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNY 190 (367)
T ss_pred CCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccC
Confidence 9876 67888889999999999754321 112222333333 89999995 322
Q ss_pred CCC--CCccCcCCC---CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPR--QEIDEVFYP---PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~--~~~~E~~~~---~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
... ..++|+.+. .+..+...|..+|..+|+++...
T Consensus 191 ~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 230 (367)
T PLN02686 191 PHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRA 230 (367)
T ss_pred CCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHH
Confidence 111 235565432 12334456899999999998653
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.6e-14 Score=123.64 Aligned_cols=130 Identities=28% Similarity=0.408 Sum_probs=85.5
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCe----EEEecCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKI----SVVTGDVSL 207 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v----~~v~~Dl~~ 207 (298)
||||||+|.||+.|+++|++.++ .+|++++|++.. .-.++..+... .+ ..++ ..+.+|+.+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~---l~~l~~~l~~~--------~~--~~~v~~~~~~vigDvrd 65 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENK---LYELERELRSR--------FP--DPKVRFEIVPVIGDVRD 65 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHH---HHHHHHHCHHH--------C----TTCEEEEE--CTSCCH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhH---HHHHHHHHhhc--------cc--ccCcccccCceeecccC
Confidence 79999999999999999999975 479999997432 11222221110 00 1234 456899998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccC---ccccHHHHhhccccc--------------eEEEEeCCcccCCCCCcc
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVR---FDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEID 268 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~---~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~ 268 (298)
.. .+..+++ ++|+|||.||.-+ ....+.+.+++|+.| +||++||--+.
T Consensus 66 ~~------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv------- 132 (293)
T PF02719_consen 66 KE------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV------- 132 (293)
T ss_dssp HH------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS-------
T ss_pred HH------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC-------
Confidence 76 7888988 8999999999754 235667778999999 99999996322
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+|. +.|+++|.++|+++..++
T Consensus 133 -----~Pt---nvmGatKrlaE~l~~~~~ 153 (293)
T PF02719_consen 133 -----NPT---NVMGATKRLAEKLVQAAN 153 (293)
T ss_dssp -----S-----SHHHHHHHHHHHHHHHHC
T ss_pred -----CCC---cHHHHHHHHHHHHHHHHh
Confidence 244 456778899999988764
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.8e-13 Score=122.14 Aligned_cols=141 Identities=19% Similarity=0.203 Sum_probs=92.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||.+++++|++.|++ |+++.|+.. +..+.... + .++.++.+|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~---Vv~~~R~~~------~~~~~~~~-----l--------~~v~~~~~Dl~ 81 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAH---VIVPARRPD------VAREALAG-----I--------DGVEVVMLDLA 81 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h--------hhCeEEEccCC
Confidence 46789999999999999999999999876 888888632 11111110 0 24778999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----cccHHHHhhccccc------------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----DENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----~~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+.. .+..++ .++|++|||||.... ...++..+++|+.| ++|++|
T Consensus 82 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS 155 (315)
T PRK06196 82 DLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALS 155 (315)
T ss_pred CHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 865 343333 468999999996432 13456667888777 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|...........+.....+..++..|..+|...+.+.+.
T Consensus 156 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 194 (315)
T PRK06196 156 SAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVH 194 (315)
T ss_pred CHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHH
Confidence 974332111111111122344566788888877766543
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-13 Score=124.82 Aligned_cols=146 Identities=24% Similarity=0.322 Sum_probs=104.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++.+++||||+||+|+||+++|++++. ..+|.+++.............. ....+++++.+|+.+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~---------------~~~~~v~~~~~D~~~ 66 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTG---------------FRSGRVTVILGDLLD 66 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhc---------------ccCCceeEEecchhh
Confidence 457899999999999999999999974 3568888776542111111000 013688999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccC--ccc-cHHHHhhccccc--------------eEEEEeCCcccCCCCC---c
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVR--FDE-NIKVAIAINIFG--------------SFVHVSTAYTHCPRQE---I 267 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~--~~~-~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~---~ 267 (298)
.. .+...++++ .|+|+|+... +.. +.+..+++||.| ++||+||.++.....+ -
T Consensus 67 ~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~ 139 (361)
T KOG1430|consen 67 AN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIING 139 (361)
T ss_pred hh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccC
Confidence 77 688888899 7777777532 223 467788999998 9999999877544332 3
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+|+. +.|...+..|..+|..+|+++.+++
T Consensus 140 ~E~~-p~p~~~~d~Y~~sKa~aE~~Vl~an 168 (361)
T KOG1430|consen 140 DESL-PYPLKHIDPYGESKALAEKLVLEAN 168 (361)
T ss_pred CCCC-CCccccccccchHHHHHHHHHHHhc
Confidence 3444 3445566788999999999998775
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.7e-13 Score=119.44 Aligned_cols=142 Identities=21% Similarity=0.237 Sum_probs=94.0
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+.+|+|+||||+.+||.+++.+|.+.|.+ ++.++|.... .+++.+.++. ..+. +++.++++|
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~---l~lvar~~rr---l~~v~~~l~~--------~~~~--~~v~~~~~D 71 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAK---LVLVARRARR---LERVAEELRK--------LGSL--EKVLVLQLD 71 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCc---eEEeehhhhh---HHHHHHHHHH--------hCCc--CccEEEeCc
Confidence 3467999999999999999999999999876 6666665432 2333222211 1111 269999999
Q ss_pred CCCCCCCC-CHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 205 VSLPGLGL-SAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 205 l~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
+++.+.-. ..++....+.++|++|||||..... .+....+++|+.| +||.+||+
T Consensus 72 vs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSi 151 (282)
T KOG1205|consen 72 VSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSI 151 (282)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecc
Confidence 99875100 0112234566899999999986411 3445578999999 89999999
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
.|.... |..+ .|..||.+-+.+.+
T Consensus 152 aG~~~~----------P~~~--~Y~ASK~Al~~f~e 175 (282)
T KOG1205|consen 152 AGKMPL----------PFRS--IYSASKHALEGFFE 175 (282)
T ss_pred ccccCC----------Cccc--ccchHHHHHHHHHH
Confidence 876432 2211 56666666555544
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.4e-13 Score=117.48 Aligned_cols=114 Identities=22% Similarity=0.341 Sum_probs=84.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...+++++|||||++||..++++|.++|++ |+++.|+.+ ...++.+.+.. ...-.+.++.+|+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~---liLvaR~~~---kL~~la~~l~~-----------~~~v~v~vi~~DL 65 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYN---LILVARRED---KLEALAKELED-----------KTGVEVEVIPADL 65 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCcHH---HHHHHHHHHHH-----------hhCceEEEEECcC
Confidence 356889999999999999999999999988 999999743 22222222221 1224678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
++++ ....+.. .+|++|||||...+. ....+.+++|+.+ .+|
T Consensus 66 s~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~Ii 139 (265)
T COG0300 66 SDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHII 139 (265)
T ss_pred CChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 9986 4444432 599999999986433 2335578899888 899
Q ss_pred EEeCCcccC
Q psy14522 254 HVSTAYTHC 262 (298)
Q Consensus 254 ~iSS~~~~~ 262 (298)
+|+|..+..
T Consensus 140 NI~S~ag~~ 148 (265)
T COG0300 140 NIGSAAGLI 148 (265)
T ss_pred EEechhhcC
Confidence 999997764
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-13 Score=122.52 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=83.1
Q ss_pred eecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCC
Q psy14522 133 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGL 212 (298)
Q Consensus 133 LVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl 212 (298)
||||||||||++|++.|++.|++ |+++.+. ..+|+.+..
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~-----------------------------------~~~Dl~~~~--- 39 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTH-----------------------------------KELDLTRQA--- 39 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc---EEEeecc-----------------------------------ccCCCCCHH---
Confidence 69999999999999999999876 5544321 136777754
Q ss_pred CHHHHHHHhc--CccEEEEcCcccCc----cccHHHHhhccccc--------------eEEEEeCCcccC--CCCCccCc
Q psy14522 213 SAADRAVLRR--NVTVVFHGAATVRF----DENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEIDEV 270 (298)
Q Consensus 213 ~~~~~~~l~~--~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~~E~ 270 (298)
.+..+++ ++|+|||+|+..+. ......+++.|+.+ +|||+||.++++ ...+++|+
T Consensus 40 ---~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~ 116 (306)
T PLN02725 40 ---DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPET 116 (306)
T ss_pred ---HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHH
Confidence 5666655 58999999997532 13344566777776 899999975443 34567787
Q ss_pred CCCC-CCChH-HHHHHHHHHHHHHHhhh
Q psy14522 271 FYPP-PYDYK-DFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~-p~~~y-~~yk~sK~~aE~~l~~~ 296 (298)
.+.. |..+. ..|..+|..+|++++..
T Consensus 117 ~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 144 (306)
T PLN02725 117 ALLTGPPEPTNEWYAIAKIAGIKMCQAY 144 (306)
T ss_pred HhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 5321 22222 24888999999887643
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=122.49 Aligned_cols=147 Identities=18% Similarity=0.161 Sum_probs=92.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+++||.+++++|++.|.. |++..|+... ..+...+ +.. . ....++.++.+|++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~---Vil~~R~~~~--~~~~~~~-l~~--------~--~~~~~v~~~~~Dl~ 75 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAE---VILPVRNRAK--GEAAVAA-IRT--------A--VPDAKLSLRALDLS 75 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHH-HHH--------h--CCCCceEEEEecCC
Confidence 46899999999999999999999999865 8888886431 1111111 110 0 01136889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc------ccHHHHhhccccc-----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD------ENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~------~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
+.. .+..+ ..++|++|||||..... ..++..+.+|+.| ++|++|
T Consensus 76 d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vs 149 (313)
T PRK05854 76 SLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQS 149 (313)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 865 33333 24689999999975321 4556677888887 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|.........+..-....+..++..|..+|...+.+...
T Consensus 150 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 188 (313)
T PRK05854 150 SIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALE 188 (313)
T ss_pred chhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHH
Confidence 975432211111111111223455677777766665543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.9e-13 Score=121.28 Aligned_cols=119 Identities=14% Similarity=0.114 Sum_probs=76.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+||||||+||||++|++.|+++|++ |+...+. +.+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~---V~~~~~~---------------------------------------~~~ 45 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGID---FHYGSGR---------------------------------------LEN 45 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCE---EEEecCc---------------------------------------cCC
Confidence 3578999999999999999999999876 5432211 111
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCc------cccHHHHhhccccc-------------eEEEEeCC--cccCC-
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRF------DENIKVAIAINIFG-------------SFVHVSTA--YTHCP- 263 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g-------------~~v~iSS~--~~~~~- 263 (298)
.. .+...+. ++|+|||+||.... ..+....+++|+.| +++++||. |+...
T Consensus 46 ~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~ 119 (298)
T PLN02778 46 RA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDA 119 (298)
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCC
Confidence 10 1221122 68999999997642 13445677888887 66777764 44322
Q ss_pred -----CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 -----RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 -----~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..++.|+..+.+. -+.|..+|+++|+++...
T Consensus 120 ~p~~~~~~~~Ee~~p~~~--~s~Yg~sK~~~E~~~~~y 155 (298)
T PLN02778 120 HPLGSGIGFKEEDTPNFT--GSFYSKTKAMVEELLKNY 155 (298)
T ss_pred CCcccCCCCCcCCCCCCC--CCchHHHHHHHHHHHHHh
Confidence 1236665543322 235888899999998753
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.5e-13 Score=119.21 Aligned_cols=118 Identities=22% Similarity=0.273 Sum_probs=86.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|+|||||||||+++++.|++.|++ |+++.|. .+|+.++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~---v~~~~r~------------------------------------~~d~~~~~- 40 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRV---VVALTSS------------------------------------QLDLTDPE- 40 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCE---EEEeCCc------------------------------------ccCCCCHH-
Confidence 4899999999999999999999876 8888773 24665544
Q ss_pred CCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccCc
Q psy14522 211 GLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDEV 270 (298)
Q Consensus 211 gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E~ 270 (298)
.+..++++ +|+|||+|+..... ......+++|+.+ +||++||.++++ ...+++|+
T Consensus 41 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~ 115 (287)
T TIGR01214 41 -----ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYRED 115 (287)
T ss_pred -----HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCC
Confidence 56666664 59999999975432 2334456666655 899999975543 33467787
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..| .+.|..+|..+|+++...
T Consensus 116 ~~~~~---~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 116 DATNP---LNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred CCCCC---cchhhHHHHHHHHHHHHh
Confidence 65544 346788899999998754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.6e-13 Score=119.79 Aligned_cols=132 Identities=17% Similarity=0.158 Sum_probs=86.2
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|||||||||||+++++.|++.|+. .|+++.|..... ++... ....+.+|+.+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~----~~~~~------------------~~~~~~~d~~~~~-- 54 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH----KFLNL------------------ADLVIADYIDKED-- 54 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch----hhhhh------------------hheeeeccCcchh--
Confidence 699999999999999999999852 377777654311 11100 0124556776654
Q ss_pred CCHHHHHHHh----cCccEEEEcCcccCcc-ccHHHHhhccccc-------------eEEEEeCCcccCC-CCCccCcCC
Q psy14522 212 LSAADRAVLR----RNVTVVFHGAATVRFD-ENIKVAIAINIFG-------------SFVHVSTAYTHCP-RQEIDEVFY 272 (298)
Q Consensus 212 l~~~~~~~l~----~~vd~Vih~A~~~~~~-~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~-~~~~~E~~~ 272 (298)
.++.+. .++|+|||+|+..+.. .+....+++|+.| +|||+||.++++. ..++.|+..
T Consensus 55 ----~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~ 130 (314)
T TIGR02197 55 ----FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRE 130 (314)
T ss_pred ----HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccC
Confidence 344444 4799999999975432 3445566777776 8999999755442 234555543
Q ss_pred CCCCChHHHHHHHHHHHHHHHhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
. ..+.+.|..+|+.+|+++++
T Consensus 131 ~--~~p~~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 131 L--ERPLNVYGYSKFLFDQYVRR 151 (314)
T ss_pred c--CCCCCHHHHHHHHHHHHHHH
Confidence 2 12344578889999998764
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=114.34 Aligned_cols=140 Identities=18% Similarity=0.146 Sum_probs=90.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+||||.+++++|+++|++ |+++.|+... ..+.+...+.. ...++.++.+|++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~---V~~~~r~~~~--~~~~~~~~l~~------------~~~~~~~~~~D~~ 66 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAH---VVVNYRQKAP--RANKVVAEIEA------------AGGRASAVGADLT 66 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCchH--hHHHHHHHHHh------------cCCceEEEEcCCC
Confidence 35789999999999999999999999876 8888886421 11222221110 1246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-cccHHHHhhccccc----------------eEEEEeCCcccC
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-DENIKVAIAINIFG----------------SFVHVSTAYTHC 262 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g----------------~~v~iSS~~~~~ 262 (298)
+++ .+..++ ..+|++||||+.... ...+...+++|+.| ++|++||..+..
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 140 (248)
T PRK07806 67 DEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHF 140 (248)
T ss_pred CHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhc
Confidence 875 343333 368999999986321 12233345566555 799999964321
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. .. .+...|..|..+|...|.+++..
T Consensus 141 ~~-----~~--~~~~~~~~Y~~sK~a~e~~~~~l 167 (248)
T PRK07806 141 IP-----TV--KTMPEYEPVARSKRAGEDALRAL 167 (248)
T ss_pred Cc-----cc--cCCccccHHHHHHHHHHHHHHHH
Confidence 10 00 11112677889999999988764
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.2e-13 Score=118.60 Aligned_cols=137 Identities=23% Similarity=0.327 Sum_probs=96.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+||||.||||+||++.|..+|++ |++++.-..+.. ..++.. ....+++.+.-|+..
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~---VIa~Dn~ftg~k--~n~~~~--------------~~~~~fel~~hdv~~ 86 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHE---VIALDNYFTGRK--ENLEHW--------------IGHPNFELIRHDVVE 86 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCe---EEEEecccccch--hhcchh--------------ccCcceeEEEeechh
Confidence 4689999999999999999999999877 888876543211 011100 112455666666544
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccC---ccccHHHHhhccccc-------------eEEEEeCC--cccCCCCCccC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVR---FDENIKVAIAINIFG-------------SFVHVSTA--YTHCPRQEIDE 269 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~---~~~~~~~~~~~Nv~g-------------~~v~iSS~--~~~~~~~~~~E 269 (298)
.++..+|.|+|+|++.+ +..+.-..+.+|+.| ||++.||+ |+.+...|..|
T Consensus 87 -----------pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e 155 (350)
T KOG1429|consen 87 -----------PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVE 155 (350)
T ss_pred -----------HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCcc
Confidence 35678999999999864 334444456677776 99999996 66554456666
Q ss_pred cCC--CCCCChHHHHHHHHHHHHHHHh
Q psy14522 270 VFY--PPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 270 ~~~--~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+.. .+|..+...|...|.++|.++-
T Consensus 156 ~ywg~vnpigpr~cydegKr~aE~L~~ 182 (350)
T KOG1429|consen 156 TYWGNVNPIGPRSCYDEGKRVAETLCY 182 (350)
T ss_pred ccccccCcCCchhhhhHHHHHHHHHHH
Confidence 544 3577888899999999999864
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.9e-13 Score=121.24 Aligned_cols=120 Identities=24% Similarity=0.309 Sum_probs=83.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||+|++++++|+++|++ |++++|+.... ..+ . ..+++++.+|+.++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~---V~~l~R~~~~~---~~l----~--------------~~~v~~v~~Dl~d~~ 56 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQ---VRCLVRNLRKA---SFL----K--------------EWGAELVYGDLSLPE 56 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe---EEEEEcChHHh---hhH----h--------------hcCCEEEECCCCCHH
Confidence 57999999999999999999999876 99999974211 000 0 136889999999876
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCCCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYPPP 275 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~~p 275 (298)
.+...++++|+|||+++... .+...+.++|+.| +|||+||..+... +
T Consensus 57 ------~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~-----------~ 117 (317)
T CHL00194 57 ------TLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY-----------P 117 (317)
T ss_pred ------HHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc-----------C
Confidence 78888899999999987432 1112233333333 9999998632210 1
Q ss_pred CChHHHHHHHHHHHHHHHhh
Q psy14522 276 YDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 276 ~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+ |..+|+.+|++++.
T Consensus 118 ~~~---~~~~K~~~e~~l~~ 134 (317)
T CHL00194 118 YIP---LMKLKSDIEQKLKK 134 (317)
T ss_pred CCh---HHHHHHHHHHHHHH
Confidence 122 45678888888764
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.5e-13 Score=118.54 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=88.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.++++|||||+|+||++++++|+++|++ |++++|.... .++..+.+. ....++.++.+|++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 65 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMK---LVLADVQQDA---LDRAVAELR------------AQGAEVLGVRTDVS 65 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHHH------------hcCCeEEEEECCCC
Confidence 35789999999999999999999999876 8888885321 112211111 11246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc----------------------
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG---------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g---------------------- 250 (298)
+.. .+..+++ ++|+||||||..... ..+...+++|+.|
T Consensus 66 d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~ 139 (287)
T PRK06194 66 DAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAY 139 (287)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 875 4544443 589999999985421 2334456677665
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+++.... . ..+.|..+|+..+.+.+.
T Consensus 140 ~g~iv~~sS~~~~~~~---------~---~~~~Y~~sK~a~~~~~~~ 174 (287)
T PRK06194 140 EGHIVNTASMAGLLAP---------P---AMGIYNVSKHAVVSLTET 174 (287)
T ss_pred CeEEEEeCChhhccCC---------C---CCcchHHHHHHHHHHHHH
Confidence 48999998654321 1 123567777877777654
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.4e-12 Score=110.73 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=84.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCcccc-CCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFR-SKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~-~~v~~v~~Dl 205 (298)
..+|+++||||+++||.++++.|.+.|+. |++..|+. +||+++... .. ..+.++..|+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~---vvl~aRR~------drL~~la~~------------~~~~~~~~~~~DV 62 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAK---VVLAARRE------ERLEALADE------------IGAGAALALALDV 62 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCe---EEEEeccH------HHHHHHHHh------------hccCceEEEeecc
Confidence 35689999999999999999999999976 99999874 344443221 11 4688899999
Q ss_pred CCCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCc
Q psy14522 206 SLPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAY 259 (298)
Q Consensus 206 ~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~ 259 (298)
+|..- .-..+.+..-+.++|++|||||.... ..+|..++++|+.| .+|++||+.
T Consensus 63 tD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 63 TDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred CCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 99750 00011233334579999999997632 25778899999999 999999997
Q ss_pred cc
Q psy14522 260 TH 261 (298)
Q Consensus 260 ~~ 261 (298)
+.
T Consensus 143 G~ 144 (246)
T COG4221 143 GR 144 (246)
T ss_pred cc
Confidence 64
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-12 Score=116.57 Aligned_cols=129 Identities=23% Similarity=0.290 Sum_probs=88.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|++|||||+||||++++++|+++|+. |+++.|+.. ++..... ....++.++.+|+++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~---v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~ 60 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDR---VAATVRRPD------ALDDLKA------------RYGDRLWVLQLDVTDS 60 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------hccCceEEEEccCCCH
Confidence 468999999999999999999999866 888888632 1211111 1124788999999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
. .+..++ .++|+||||||..... ..+...+++|+.| +||++|
T Consensus 61 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 134 (276)
T PRK06482 61 A------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS 134 (276)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 5 343332 4689999999975422 2334556677766 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ....+.|..+|+..|.+++.+
T Consensus 135 S~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 135 SEGGQIA------------YPGFSLYHATKWGIEGFVEAV 162 (276)
T ss_pred CcccccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 9754311 112346777888888777643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.9e-13 Score=115.49 Aligned_cols=131 Identities=20% Similarity=0.222 Sum_probs=89.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.+++++|++.|++ |+++.|.... .+++.+.+.. ...++.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~---vi~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~Dl~ 65 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGAS---VVVADINAEG---AERVAKQIVA------------DGGTAIAVQVDVS 65 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEEcCCC
Confidence 35789999999999999999999999876 8888886421 1222222110 1136778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc----------cccHHHHhhccccc------------------e
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF----------DENIKVAIAINIFG------------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~----------~~~~~~~~~~Nv~g------------------~ 251 (298)
+.. .+..++ ..+|+||||||.... ...+.+.+++|+.+ +
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (250)
T PRK07774 66 DPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA 139 (250)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence 865 333332 468999999997421 12344567788877 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+++||..+.. + ++.|..+|+..|.+.+.+
T Consensus 140 iv~~sS~~~~~------------~---~~~Y~~sK~a~~~~~~~l 169 (250)
T PRK07774 140 IVNQSSTAAWL------------Y---SNFYGLAKVGLNGLTQQL 169 (250)
T ss_pred EEEEecccccC------------C---ccccHHHHHHHHHHHHHH
Confidence 99999976532 1 234777888888777654
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=115.15 Aligned_cols=122 Identities=12% Similarity=0.141 Sum_probs=87.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+|+||+++++.|++.|++ |+++.|+... ..++.++.+|++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~---Vi~~~r~~~~--------------------------~~~~~~~~~D~~ 54 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSN---VINFDIKEPS--------------------------YNDVDYFKVDVS 54 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCccc--------------------------cCceEEEEccCC
Confidence 46799999999999999999999999876 8888886431 135788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| ++|+
T Consensus 55 ~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 128 (258)
T PRK06398 55 NKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN 128 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 875 333332 468999999997432 13455567888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+... ..+ ...|..+|...+.+.+.
T Consensus 129 isS~~~~~~---------~~~---~~~Y~~sKaal~~~~~~ 157 (258)
T PRK06398 129 IASVQSFAV---------TRN---AAAYVTSKHAVLGLTRS 157 (258)
T ss_pred eCcchhccC---------CCC---CchhhhhHHHHHHHHHH
Confidence 999755421 112 23466666766666554
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-12 Score=116.23 Aligned_cols=136 Identities=13% Similarity=0.143 Sum_probs=89.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|++.|++ |++..|...... .+.+.+.+. ....++.++.+|++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~i~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~Dl~ 116 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGAD---IALNYLPEEEQD-AAEVVQLIQ------------AEGRKAVALPGDLK 116 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCE---EEEEeCCcchHH-HHHHHHHHH------------HcCCeEEEEecCCC
Confidence 45789999999999999999999999876 666555432111 112222211 11246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~i 255 (298)
++. .+..+ +.++|++|||||.... ...+...+++|+.| +||++
T Consensus 117 ~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~ 190 (300)
T PRK06128 117 DEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINT 190 (300)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEE
Confidence 865 33333 3478999999996421 13456678888887 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+.... ..+..|..+|...+.+.+.+
T Consensus 191 sS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 219 (300)
T PRK06128 191 GSIQSYQPS------------PTLLDYASTKAAIVAFTKAL 219 (300)
T ss_pred CCccccCCC------------CCchhHHHHHHHHHHHHHHH
Confidence 998654321 12334777777777776543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-12 Score=114.08 Aligned_cols=111 Identities=18% Similarity=0.173 Sum_probs=77.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||++++++|+++|++ |+++.|.... .+++...+. ....++.++.+|++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 63 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAK---VVIADLNDEA---AAAAAEALQ------------KAGGKAIGVAMDVT 63 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 35689999999999999999999999876 8888887432 112211111 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ ..+|+|||+|+..... ..+...+++|+.| +||+
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 137 (258)
T PRK12429 64 DEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIIN 137 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEE
Confidence 875 343333 3689999999964321 2334456677766 7999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||..+.
T Consensus 138 iss~~~~ 144 (258)
T PRK12429 138 MASVHGL 144 (258)
T ss_pred Ecchhhc
Confidence 9998554
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-12 Score=116.89 Aligned_cols=129 Identities=15% Similarity=0.128 Sum_probs=87.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||++++++|+++|++ |+++.|+... .+.+.. ....++.++.+|+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~~---~~~l~~---------------~~~~~~~~~~~D~~d 61 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR---VVGTVRSEAA---RADFEA---------------LHPDRALARLLDVTD 61 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE---EEEEeCCHHH---HHHHHh---------------hcCCCeeEEEccCCC
Confidence 4678999999999999999999999876 8888886421 111111 112468889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..++ .++|+||||||..... ..+...+++|+.| ++|++
T Consensus 62 ~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 135 (277)
T PRK06180 62 FD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI 135 (277)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 65 343333 3689999999975321 2344557778766 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+.... ++ +..|..+|...|.+.+.
T Consensus 136 SS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~ 163 (277)
T PRK06180 136 TSMGGLITM---------PG---IGYYCGSKFALEGISES 163 (277)
T ss_pred ecccccCCC---------CC---cchhHHHHHHHHHHHHH
Confidence 998554221 12 33466667766666554
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-12 Score=114.60 Aligned_cols=134 Identities=14% Similarity=0.133 Sum_probs=89.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||.++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~---Vi~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 69 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGAD---VLIAARTESQ---LDEVAEQIR------------AAGRRAHVVAADLA 69 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 45789999999999999999999999876 8888886321 112221111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|+|||+||.... ...+...+.+|+.+ ++|
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv 143 (263)
T PRK07814 70 HPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI 143 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 865 343332 478999999996421 13345566777765 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+++... ...+..|..+|+..+.+.+..
T Consensus 144 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 174 (263)
T PRK07814 144 NISSTMGRLA------------GRGFAAYGTAKAALAHYTRLA 174 (263)
T ss_pred EEccccccCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 9999765321 112335777778877776643
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=113.14 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=89.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|++|.+++++|+++|+. |+++.|+... ...+.+.+. ....++.++.+|++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~ 65 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAE---VIVVDICGDD---AAATAELVE------------AAGGKARARQVDVR 65 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEECCCC
Confidence 45789999999999999999999999876 8999987421 111111111 11245888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc----c---ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF----D---ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~----~---~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ ..+|+|||+|+.... . ..+...+++|+.+ +|++
T Consensus 66 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 139 (251)
T PRK12826 66 DRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVL 139 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 444444 368999999987643 1 2334455666665 6999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... +...+..|..+|...+.+++.+
T Consensus 140 ~ss~~~~~~-----------~~~~~~~y~~sK~a~~~~~~~~ 170 (251)
T PRK12826 140 TSSVAGPRV-----------GYPGLAHYAASKAGLVGFTRAL 170 (251)
T ss_pred EechHhhcc-----------CCCCccHHHHHHHHHHHHHHHH
Confidence 999855411 1112345677777777776553
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-12 Score=116.71 Aligned_cols=127 Identities=17% Similarity=0.211 Sum_probs=87.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||.++++.|++.|++ |++++|+.. .+..... .++.++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~---Vi~~~r~~~------~~~~l~~---------------~~~~~~~~Dl~d 58 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR---VFATCRKEE------DVAALEA---------------EGLEAFQLDYAE 58 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH---------------CCceEEEccCCC
Confidence 3678999999999999999999999876 888888642 1111100 357788999998
Q ss_pred CCCCCCHHHHHHHh--------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 208 PGLGLSAADRAVLR--------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 208 ~~~gl~~~~~~~l~--------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
.. .+..++ ..+|++|||||..... ..+...+++|+.| +||+
T Consensus 59 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~ 132 (277)
T PRK05993 59 PE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQ 132 (277)
T ss_pred HH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 64 333222 3689999999865321 2334567788776 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+++..+ ....+.|..+|+..+.+.+.+
T Consensus 133 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 133 CSSILGLVP------------MKYRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred ECChhhcCC------------CCccchHHHHHHHHHHHHHHH
Confidence 999865422 112345777788888776543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.9e-12 Score=113.55 Aligned_cols=125 Identities=15% Similarity=0.230 Sum_probs=87.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+++||||+|+||++++++|++.|++ |+++.|+.. ++.+... .++.++.+|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~------~l~~~~~---------------~~~~~~~~Dv~~ 57 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYT---VYGAARRVD------KMEDLAS---------------LGVHPLSLDVTD 57 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHh---------------CCCeEEEeeCCC
Confidence 4689999999999999999999999876 888888632 2221111 357889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++ .+..+++ ++|++|||||..... ..+...+++|+.| ++|++
T Consensus 58 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~i 131 (273)
T PRK06182 58 EA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINI 131 (273)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 65 4444443 789999999975321 2345567778765 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
||..+.... | ..+.|..+|...+.+.+
T Consensus 132 sS~~~~~~~----------~--~~~~Y~~sKaa~~~~~~ 158 (273)
T PRK06182 132 SSMGGKIYT----------P--LGAWYHATKFALEGFSD 158 (273)
T ss_pred cchhhcCCC----------C--CccHhHHHHHHHHHHHH
Confidence 997643211 1 12347777777777654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.5e-12 Score=113.42 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=90.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|++.|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 65 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAK---VVVGARRQAE---LDQLVAEIR------------AEGGEAVALAGDVR 65 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 35789999999999999999999999876 8888886431 112211111 11246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ .+..++ .++|++|||||..... ..+...+++|+.+ ++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv 139 (254)
T PRK07478 66 DEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLI 139 (254)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence 865 333333 3789999999974321 2345667888876 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... +...+..|..+|+..+.+.+.+
T Consensus 140 ~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~l 171 (254)
T PRK07478 140 FTSTFVGHTA-----------GFPGMAAYAASKAGLIGLTQVL 171 (254)
T ss_pred EEechHhhcc-----------CCCCcchhHHHHHHHHHHHHHH
Confidence 9999765421 1112345777777777766543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-12 Score=113.34 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=87.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEE-ecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYL-LVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~-l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+++++||||+|+||+++++.|++.|++ |++ ..|.... .+.+.+.+. ....++.++.+|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~---v~~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~ 63 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYD---IAVNYARSRKA---AEETAEEIE------------ALGRKALAVKANV 63 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHHH------------hcCCeEEEEEcCC
Confidence 35689999999999999999999999876 554 4665321 111111111 1124688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..++ ..+|+|||+||..... ..+...+.+|+.+ +||
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 137 (250)
T PRK08063 64 GDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9875 444433 3689999999864321 1223345677665 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.... +...+..|..+|+..|.+++.+
T Consensus 138 ~~sS~~~~~------------~~~~~~~y~~sK~a~~~~~~~~ 168 (250)
T PRK08063 138 SLSSLGSIR------------YLENYTTVGVSKAALEALTRYL 168 (250)
T ss_pred EEcchhhcc------------CCCCccHHHHHHHHHHHHHHHH
Confidence 999974321 1123456888899998887654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-12 Score=113.36 Aligned_cols=134 Identities=18% Similarity=0.197 Sum_probs=90.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 64 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGAD---VVLAARTAER---LDEVAAEID------------DLGRRALAVPTDIT 64 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------HhCCceEEEecCCC
Confidence 56799999999999999999999999876 8888886421 122222111 01246889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc--------cccHHHHhhccccc-----------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF--------DENIKVAIAINIFG-----------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g-----------------~~v~ 254 (298)
++. .+..+ +.++|++||+||.... ...+...+++|+.| +||+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~ 138 (258)
T PRK07890 65 DED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM 138 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 865 33332 3468999999986421 13345567778777 6999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+..+ ...+..|..+|...+.+++..
T Consensus 139 ~sS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~~ 168 (258)
T PRK07890 139 INSMVLRHS------------QPKYGAYKMAKGALLAASQSL 168 (258)
T ss_pred EechhhccC------------CCCcchhHHHHHHHHHHHHHH
Confidence 999754321 112345677777777766543
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-12 Score=118.81 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=74.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+++||||+|+||.++++.|+++|++ |+++.|+.. +..+.... +. ....++.++.+|+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~---V~~~~r~~~------~~~~~~~~-----l~----~~~~~~~~~~~Dl~~ 66 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWH---VIMACRNLK------KAEAAAQE-----LG----IPPDSYTIIHIDLGD 66 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----hh----ccCCceEEEEecCCC
Confidence 5789999999999999999999999866 888888632 11111110 00 012468889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----c---ccHHHHhhccccc--------------------eE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----D---ENIKVAIAINIFG--------------------SF 252 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----~---~~~~~~~~~Nv~g--------------------~~ 252 (298)
.. .+..++ .++|++|||||.... . ..++..+++|+.| ||
T Consensus 67 ~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~ri 140 (322)
T PRK07453 67 LD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRL 140 (322)
T ss_pred HH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 65 343333 259999999996421 1 2345567788776 79
Q ss_pred EEEeCCc
Q psy14522 253 VHVSTAY 259 (298)
Q Consensus 253 v~iSS~~ 259 (298)
|++||..
T Consensus 141 V~vsS~~ 147 (322)
T PRK07453 141 VILGTVT 147 (322)
T ss_pred EEEcccc
Confidence 9999963
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3e-12 Score=113.32 Aligned_cols=136 Identities=17% Similarity=0.134 Sum_probs=90.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|.... .+.+.+.+.. .....++.++.+|++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~---vv~~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~~~Dl~ 68 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAA---VALADLDAAL---AERAAAAIAR----------DVAGARVLAVPADVT 68 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh----------ccCCceEEEEEccCC
Confidence 46899999999999999999999999876 8888886321 1122111110 001246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.+ ++|+
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 142 (260)
T PRK07063 69 DAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVN 142 (260)
T ss_pred CHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 865 343333 479999999996432 13455667788776 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ...+..|..+|+..+.+.+.+
T Consensus 143 isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 172 (260)
T PRK07063 143 IASTHAFKI------------IPGCFPYPVAKHGLLGLTRAL 172 (260)
T ss_pred ECChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 999865422 112335677777776665543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-12 Score=112.94 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=90.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||.++++.|++.|++ |+++.|... .+++.+.+. ....++.++.+|++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~~D~~ 73 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGAD---IIITTHGTN----WDETRRLIE------------KEGRKVTFVQVDLT 73 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCcH----HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 56899999999999999999999999876 777777621 122222221 11246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ ..+|++|||||.... ...++..+++|+.+ ++++
T Consensus 74 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 147 (258)
T PRK06935 74 KPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIIN 147 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 865 344333 368999999997431 13455667788777 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... ..+..|..+|...+.+.+.+
T Consensus 148 isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 177 (258)
T PRK06935 148 IASMLSFQGG------------KFVPAYTASKHGVAGLTKAF 177 (258)
T ss_pred ECCHHhccCC------------CCchhhHHHHHHHHHHHHHH
Confidence 9998553221 11235667777777776654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-12 Score=115.16 Aligned_cols=125 Identities=18% Similarity=0.222 Sum_probs=89.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||++++++|+++|++ |+++.|+..... ...+++++.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~---V~~~~r~~~~~~-----------------------~~~~~~~~~~D~~d 56 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR---VFGTSRNPARAA-----------------------PIPGVELLELDVTD 56 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCChhhcc-----------------------ccCCCeeEEeecCC
Confidence 4678999999999999999999999876 888888643210 11467889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..+++ .+|++|||||..... ..+...+++|+.| +||++
T Consensus 57 ~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~i 130 (270)
T PRK06179 57 DA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINI 130 (270)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 75 4554443 589999999975321 2345667788766 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||.++... ...++.|..+|...+.+.+.+
T Consensus 131 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 131 SSVLGFLP------------APYMALYAASKHAVEGYSESL 159 (270)
T ss_pred CCccccCC------------CCCccHHHHHHHHHHHHHHHH
Confidence 99865432 112345777778777776543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.7e-12 Score=112.52 Aligned_cols=133 Identities=13% Similarity=0.141 Sum_probs=90.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||++++++|++.|.+ |+++.|+.... ++.+.+. ....++.++.+|++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~---v~~~~r~~~~~----~~~~~~~------------~~~~~~~~~~~D~~ 65 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAI---PVIFGRSAPDD----EFAEELR------------ALQPRAEFVQVDLT 65 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCc---EEEEcCChhhH----HHHHHHH------------hcCCceEEEEccCC
Confidence 46889999999999999999999999876 78888875421 1111111 11246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccC---cc---ccHHHHhhccccc-----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVR---FD---ENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~---~~---~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
++. .+..++ ..+|+||||||... .. ..+...+++|+.+ +|+++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 66 DDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 865 343333 36899999999642 11 3345556777765 699999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ...+..|..+|+..+.+.+.+
T Consensus 140 s~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 167 (258)
T PRK08628 140 SKTALTG------------QGGTSGYAAAKGAQLALTREW 167 (258)
T ss_pred CHHhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 9755421 112346777788877777654
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.5e-12 Score=115.27 Aligned_cols=138 Identities=21% Similarity=0.236 Sum_probs=92.0
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|+||||||+||+++++.|+++|++ |+++.|..... ..++... .. ..+++++.+|+.++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~---V~~~~~~~~~~--~~~~~~~-------------~~-~~~~~~~~~D~~~~~- 60 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE---VVVLDNLSNGS--PEALKRG-------------ER-ITRVTFVEGDLRDRE- 60 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe---EEEEeCCCccc--hhhhhhh-------------cc-ccceEEEECCCCCHH-
Confidence 5899999999999999999999876 77665543211 1111100 00 125778899999876
Q ss_pred CCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCccC
Q psy14522 211 GLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEIDE 269 (298)
Q Consensus 211 gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~~E 269 (298)
.+..++. ++|+|||+||..... ......+..|+.+ ++|++||.+.++ ...+++|
T Consensus 61 -----~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e 135 (328)
T TIGR01179 61 -----LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISE 135 (328)
T ss_pred -----HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccc
Confidence 5666664 699999999975322 2223344555554 899999974433 2335677
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+..| ...|..+|+.+|+++...
T Consensus 136 ~~~~~~---~~~y~~sK~~~e~~~~~~ 159 (328)
T TIGR01179 136 DSPLGP---INPYGRSKLMSERILRDL 159 (328)
T ss_pred cCCCCC---CCchHHHHHHHHHHHHHH
Confidence 765444 446788899999988764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-12 Score=113.56 Aligned_cols=111 Identities=20% Similarity=0.215 Sum_probs=76.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+|+||+++++.|++.|++ |+++.|.... .+++.+.+. ....++.++.+|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 66 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAA---VAIADLNQDG---ANAVADEIN------------KAGGKAIGVAMDVT 66 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCChHH---HHHHHHHHH------------hcCceEEEEECCCC
Confidence 35789999999999999999999999877 8888886431 112221111 11246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+.. .+..++ .++|+||||||..... ..+...+++|+.+ +||
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv 140 (262)
T PRK13394 67 NED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVI 140 (262)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 865 343333 3589999999975321 2344456667665 799
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||.++.
T Consensus 141 ~~ss~~~~ 148 (262)
T PRK13394 141 YMGSVHSH 148 (262)
T ss_pred EEcchhhc
Confidence 99997543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.1e-12 Score=112.77 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=86.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+... .+.+.+.+.. . .....+.++.+|++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~---v~~~~r~~~~---~~~~~~~l~~--------~--~~~~~~~~~~~Dl~ 65 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI---VIAADIDKEA---LNELLESLGK--------E--FKSKKLSLVELDIT 65 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecChHH---HHHHHHHHHh--------h--cCCCceeEEEecCC
Confidence 46799999999999999999999999876 7878776431 1111111110 0 01135677799999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------c---ccHHHHhhccccc------------------e
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------D---ENIKVAIAINIFG------------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~---~~~~~~~~~Nv~g------------------~ 251 (298)
+++ .+..+++ .+|+|||||+.... . ..+...+++|+.+ +
T Consensus 66 d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T PRK09186 66 DQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN 139 (256)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence 875 4444433 48999999975321 1 2234455666654 8
Q ss_pred EEEEeCCcccCCC-CCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 252 FVHVSTAYTHCPR-QEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 252 ~v~iSS~~~~~~~-~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
||++||+++.... ....+..+..+.. .|..+|...+.+.+
T Consensus 140 iv~~sS~~~~~~~~~~~~~~~~~~~~~---~Y~~sK~a~~~l~~ 180 (256)
T PRK09186 140 LVNISSIYGVVAPKFEIYEGTSMTSPV---EYAAIKAGIIHLTK 180 (256)
T ss_pred EEEEechhhhccccchhccccccCCcc---hhHHHHHHHHHHHH
Confidence 9999998654321 1122222211122 35666666666654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.6e-12 Score=109.17 Aligned_cols=135 Identities=12% Similarity=0.104 Sum_probs=88.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++||||||+||||++++++|+++|++ |+++.|.... ..+.+...+.. .....+.++.+|+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~---v~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~ 68 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYR---VAIHYHRSAA--EADALAAELNA-----------LRPGSAAALQADLLD 68 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHHh-----------hcCCceEEEEcCCCC
Confidence 4689999999999999999999999876 8888886421 11111111110 011357889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEEe
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
.. .+..++ .++|+|||+||.... ...+...+++|+.| .+++++
T Consensus 69 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~ 142 (249)
T PRK09135 69 PD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNIT 142 (249)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEe
Confidence 65 444443 368999999996421 12345677889888 344444
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+..+ .. |..+...|..+|..+|.+++.+
T Consensus 143 ~~~~---------~~---~~~~~~~Y~~sK~~~~~~~~~l 170 (249)
T PRK09135 143 DIHA---------ER---PLKGYPVYCAAKAALEMLTRSL 170 (249)
T ss_pred Chhh---------cC---CCCCchhHHHHHHHHHHHHHHH
Confidence 4322 11 2334556888889988887754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.6e-12 Score=112.40 Aligned_cols=131 Identities=18% Similarity=0.171 Sum_probs=87.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
++++|||||+|+||+++++.|++.|++ |+++.|.... .+.+.+... ....++.++.+|++++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~~ 63 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN---VIAGVQIAPQ---VTALRAEAA------------RRGLALRVEKLDLTDA 63 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcceEEEeeCCCH
Confidence 468999999999999999999999876 8888886321 112211111 1124688899999987
Q ss_pred CCCCCHHHHHHHhc-CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcccC
Q psy14522 209 GLGLSAADRAVLRR-NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYTHC 262 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~~~ 262 (298)
. .+..... ++|+||||||..... ..+...+.+|+.| +||++||..+..
T Consensus 64 ~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (257)
T PRK09291 64 I------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI 137 (257)
T ss_pred H------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence 5 5666655 899999999964311 2234455666654 799999975432
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.. | ....|..+|...|.+.+.
T Consensus 138 ~~----------~--~~~~Y~~sK~a~~~~~~~ 158 (257)
T PRK09291 138 TG----------P--FTGAYCASKHALEAIAEA 158 (257)
T ss_pred CC----------C--CcchhHHHHHHHHHHHHH
Confidence 11 1 123466677777766543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.1e-12 Score=112.07 Aligned_cols=136 Identities=15% Similarity=0.176 Sum_probs=90.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~D~~ 68 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQ---VAIAARHLD---ALEKLADEIG------------TSGGKVVPVCCDVS 68 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHH------------hcCCeEEEEEccCC
Confidence 46899999999999999999999999876 888888632 1222222111 11246788899999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+ ..++|++|||||..... ..+...+++|+.+ +++
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 142 (253)
T PRK05867 69 QHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII 142 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 33333 34799999999975321 3445567888887 488
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+++.... .| .....|..+|+..+.+.+.+
T Consensus 143 ~~sS~~~~~~~---------~~-~~~~~Y~asKaal~~~~~~l 175 (253)
T PRK05867 143 NTASMSGHIIN---------VP-QQVSHYCASKAAVIHLTKAM 175 (253)
T ss_pred EECcHHhcCCC---------CC-CCccchHHHHHHHHHHHHHH
Confidence 99887643211 01 11235677777777776654
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.6e-12 Score=111.23 Aligned_cols=142 Identities=12% Similarity=0.188 Sum_probs=91.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+++||||+|+||.++++.|+++|++ |+++.|...... ....+.+... .+ .....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~l~~~~~-----~~----~~~~~~~~~~~~D~ 71 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGAN---IVIAAKTAEPHPKLPGTIHTAAE-----EI----EAAGGQALPLVGDV 71 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecccccccchhhHHHHHHH-----HH----HhcCCceEEEEecC
Confidence 35789999999999999999999999876 888888643211 1111211110 00 01124688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..++ .++|++|||||..... ..++..+++|+.| +++
T Consensus 72 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv 145 (273)
T PRK08278 72 RDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHIL 145 (273)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEE
Confidence 9875 343333 3789999999974321 2345567888887 678
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... .....+..|..+|...|.+++..
T Consensus 146 ~iss~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 178 (273)
T PRK08278 146 TLSPPLNLDP----------KWFAPHTAYTMAKYGMSLCTLGL 178 (273)
T ss_pred EECCchhccc----------cccCCcchhHHHHHHHHHHHHHH
Confidence 8887532211 00123456778888888887654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=109.68 Aligned_cols=136 Identities=17% Similarity=0.145 Sum_probs=89.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|++.|++ |+++.|+... ..+.+.+.+. ....++.++.+|++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~---v~~~~r~~~~--~~~~~~~~l~------------~~~~~~~~~~~D~~ 68 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGAD---VALFDLRTDD--GLAETAEHIE------------AAGRRAIQIAADVT 68 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCcch--HHHHHHHHHH------------hcCCceEEEEcCCC
Confidence 46899999999999999999999999876 8888886431 1122222111 11246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+ ..++|++|||||.... ...+...+++|+.| ++|+
T Consensus 69 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 69 SKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 865 33332 3468999999997532 13455667888887 7899
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+.... +......|..+|+..+.+.+.
T Consensus 143 isS~~~~~~~----------~~~~~~~Y~~sKaa~~~l~~~ 173 (254)
T PRK06114 143 IASMSGIIVN----------RGLLQAHYNASKAGVIHLSKS 173 (254)
T ss_pred ECchhhcCCC----------CCCCcchHHHHHHHHHHHHHH
Confidence 9998654221 100123466667766665544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.8e-12 Score=112.05 Aligned_cols=111 Identities=21% Similarity=0.235 Sum_probs=77.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |++..|+... .+++.+.+. ....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~---Vv~~~r~~~~---l~~~~~~l~------------~~~~~~~~~~~Dv~ 65 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGAR---VVLGDVDKPG---LRQAVNHLR------------AEGFDVHGVMCDVR 65 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEeCCCC
Confidence 46789999999999999999999999876 7777776321 112211111 11236788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| ++|
T Consensus 66 d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv 139 (275)
T PRK05876 66 HRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV 139 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 865 444333 358999999997421 13345567788777 599
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||+.+.
T Consensus 140 ~isS~~~~ 147 (275)
T PRK05876 140 FTASFAGL 147 (275)
T ss_pred EeCChhhc
Confidence 99998654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.3e-12 Score=110.71 Aligned_cols=133 Identities=17% Similarity=0.193 Sum_probs=89.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||.+++++|+++|++ |+++.|+.... +.+...+. . ..++.++.+|++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~---V~~~~r~~~~~---~~~~~~~~------------~-~~~~~~~~~D~~ 63 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGAR---VVVTDRNEEAA---ERVAAEIL------------A-GGRAIAVAADVS 63 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHh------------c-CCeEEEEECCCC
Confidence 35789999999999999999999999876 89999975321 11111110 0 246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|+|||+|+..... ..+...+++|+.| +||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 137 (251)
T PRK07231 64 DEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIV 137 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 876 444443 3689999999964211 2345567777766 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+..+ ...+..|..+|...+.+.+.+
T Consensus 138 ~~sS~~~~~~------------~~~~~~y~~sk~~~~~~~~~~ 168 (251)
T PRK07231 138 NVASTAGLRP------------RPGLGWYNASKGAVITLTKAL 168 (251)
T ss_pred EEcChhhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 9999865432 122345666777666665543
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.34 E-value=5e-12 Score=113.19 Aligned_cols=133 Identities=11% Similarity=0.099 Sum_probs=89.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|++.|++ |+++.|.... .+.+.+.+ ....++.++.+|++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~---v~~~~~~~~~---~~~~~~~~-------------~~~~~~~~~~~Dl~ 76 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAK---VCIVDLQDDL---GQNVCDSL-------------GGEPNVCFFHCDVT 76 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHh-------------cCCCceEEEEeecC
Confidence 56889999999999999999999999876 8888775321 11111111 01246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc---------cccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF---------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g------------------~~ 252 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| ++
T Consensus 77 d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 150 (280)
T PLN02253 77 VED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSI 150 (280)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceE
Confidence 875 444443 369999999997531 12345667888777 68
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++||..+.... .. ...|..+|+..|.+.+.+
T Consensus 151 i~isS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~l 182 (280)
T PLN02253 151 VSLCSVASAIGG---------LG---PHAYTGSKHAVLGLTRSV 182 (280)
T ss_pred EEecChhhcccC---------CC---CcccHHHHHHHHHHHHHH
Confidence 999987543211 01 124667778777776654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.8e-12 Score=112.64 Aligned_cols=134 Identities=17% Similarity=0.256 Sum_probs=89.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 69 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAK---VAILDRNQEK---AEAVVAEIK------------AAGGEALAVKADVL 69 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEECCCC
Confidence 46799999999999999999999999876 8888886321 112211111 11246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc----------------------cccHHHHhhccccc-------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF----------------------DENIKVAIAINIFG------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~----------------------~~~~~~~~~~Nv~g------- 250 (298)
+.. .+..+ ..++|++|||||.... ...+...+++|+.+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 143 (278)
T PRK08277 70 DKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQV 143 (278)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 865 33333 3479999999995321 12345567777776
Q ss_pred -----------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -----------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -----------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+... ......|..+|+..+.+.+.+
T Consensus 144 ~~~~~~~~~~g~ii~isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~l 188 (278)
T PRK08277 144 FAKDMVGRKGGNIINISSMNAFTP------------LTKVPAYSAAKAAISNFTQWL 188 (278)
T ss_pred HHHHHHhcCCcEEEEEccchhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 7999999865421 112345777778777776544
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.1e-12 Score=112.13 Aligned_cols=133 Identities=14% Similarity=0.071 Sum_probs=87.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~i~------------~~~~~~~~~~~D~~ 69 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAE---VILNGRDPAK---LAAAAESLK------------GQGLSAHALAFDVT 69 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------hcCceEEEEEccCC
Confidence 46899999999999999999999999876 8888886421 111111111 11235788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ ..+|++||+||..... ..++..+.+|+.+ ++|+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (255)
T PRK07523 70 DHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIIN 143 (255)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 865 444443 3589999999975321 2345556777766 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+... ...+..|..+|...+.+.+.
T Consensus 144 iss~~~~~~------------~~~~~~y~~sK~a~~~~~~~ 172 (255)
T PRK07523 144 IASVQSALA------------RPGIAPYTATKGAVGNLTKG 172 (255)
T ss_pred EccchhccC------------CCCCccHHHHHHHHHHHHHH
Confidence 999754321 11233466666666666554
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-12 Score=111.82 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=85.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|... ...+.+.+. ....++.++.+|++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~---v~~~~r~~~----~~~~~~~~~------------~~~~~~~~~~~D~~ 66 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGAR---VVLVDRSEL----VHEVAAELR------------AAGGEALALTADLE 66 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCchH----HHHHHHHHH------------hcCCeEEEEEEeCC
Confidence 56799999999999999999999999876 888888632 111111111 11246778899999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..+ ..++|++|||||.... ...+...+++|+.+ +||
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 140 (260)
T PRK12823 67 TYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIV 140 (260)
T ss_pred CHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 864 33322 2468999999985321 12334455666655 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... +. ..|..+|+..+.+.+.+
T Consensus 141 ~~sS~~~~~~-----------~~---~~Y~~sK~a~~~~~~~l 169 (260)
T PRK12823 141 NVSSIATRGI-----------NR---VPYSAAKGGVNALTASL 169 (260)
T ss_pred EEcCccccCC-----------CC---CccHHHHHHHHHHHHHH
Confidence 9999754321 11 23666777777666543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=109.36 Aligned_cols=141 Identities=10% Similarity=0.041 Sum_probs=86.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|++.|++ |++..+.... . .+.....+. ....++..+.+|++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~-~-~~~~~~~~~------------~~~~~~~~~~~D~~ 64 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKE-E-AEETVYEIQ------------SNGGSAFSIGANLE 64 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcCCCHH-H-HHHHHHHHH------------hcCCceEEEecccC
Confidence 45789999999999999999999999876 6665432211 1 111111111 01235677889998
Q ss_pred CCCC-CCCHHHHHHH----h--cCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGL-GLSAADRAVL----R--RNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l----~--~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+..- ......+.+. . .++|++|||||..... ..++..+++|+.| +||++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~is 144 (252)
T PRK12747 65 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINIS 144 (252)
T ss_pred CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEEC
Confidence 7541 0000111111 1 2699999999964211 2356677889877 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+.... .....|..+|+..+.+.+.+
T Consensus 145 S~~~~~~~------------~~~~~Y~~sKaa~~~~~~~l 172 (252)
T PRK12747 145 SAATRISL------------PDFIAYSMTKGAINTMTFTL 172 (252)
T ss_pred CcccccCC------------CCchhHHHHHHHHHHHHHHH
Confidence 98654221 12345777788877776654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.7e-12 Score=112.50 Aligned_cols=138 Identities=13% Similarity=0.077 Sum_probs=88.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++||||+|+||+++++.|+++|++ |+++.|.... ..+... ....++.++.+|+
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~---v~~~~~~~~~------~~~~~~------------~~~~~~~~~~~Dl 65 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQ---VVLADLDRER------GSKVAK------------ALGENAWFIAMDV 65 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCE---EEEEcCCHHH------HHHHHH------------HcCCceEEEEccC
Confidence 356899999999999999999999999866 8888775321 111111 0124678899999
Q ss_pred CCCCC-CCCHHHHHHHhcCccEEEEcCcccCcc---------ccHHHHhhccccc-----------------eEEEEeCC
Q psy14522 206 SLPGL-GLSAADRAVLRRNVTVVFHGAATVRFD---------ENIKVAIAINIFG-----------------SFVHVSTA 258 (298)
Q Consensus 206 ~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g-----------------~~v~iSS~ 258 (298)
+++.- ....+.+.+....+|++|||||..... ..+...+++|+.+ ++|++||.
T Consensus 66 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~ 145 (255)
T PRK05717 66 ADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAST 145 (255)
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcch
Confidence 98650 000011111223589999999975321 2345677888877 68999997
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.... + .+..|..+|...+.+.+.+
T Consensus 146 ~~~~~~----------~--~~~~Y~~sKaa~~~~~~~l 171 (255)
T PRK05717 146 RARQSE----------P--DTEAYAASKGGLLALTHAL 171 (255)
T ss_pred hhcCCC----------C--CCcchHHHHHHHHHHHHHH
Confidence 543221 1 1234667777777666543
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.9e-12 Score=110.90 Aligned_cols=131 Identities=20% Similarity=0.305 Sum_probs=88.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGAR---VAVLERSAE------KLASLRQ------------RFGDHVLVVEGDVT 62 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCcceEEEccCC
Confidence 45789999999999999999999999876 888888632 1221111 01246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------c----cHHHHhhccccc-----------------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------E----NIKVAIAINIFG----------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~----~~~~~~~~Nv~g----------------- 250 (298)
++. .+..+ ..++|++|||||..... . .+...+++|+.+
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 136 (263)
T PRK06200 63 SYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG 136 (263)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC
Confidence 865 33332 34689999999964311 1 145567788887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||+.+.... .....|..+|+..+.+.+.+
T Consensus 137 ~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 170 (263)
T PRK06200 137 SMIFTLSNSSFYPG------------GGGPLYTASKHAVVGLVRQL 170 (263)
T ss_pred EEEEECChhhcCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 69999997553211 11235777778777776654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.5e-12 Score=112.76 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=87.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+||||+|+||+++++.|+++|++ |+++.|.... +..... ....++.++.+|+++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~---V~~~~r~~~~------~~~~~~------------~~~~~~~~~~~D~~~ 60 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDR---VVATARDTAT------LADLAE------------KYGDRLLPLALDVTD 60 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEECCHHH------HHHHHH------------hccCCeeEEEccCCC
Confidence 4679999999999999999999999866 8888886321 111111 112467888999988
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..+ ..++|+||||||..... ..+...+++|+.+ ++|++
T Consensus 61 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~v 134 (275)
T PRK08263 61 RA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQI 134 (275)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 65 33333 24689999999975421 3455667788777 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... .. +..|..+|+..+.+.+.
T Consensus 135 sS~~~~~~~---------~~---~~~Y~~sKaa~~~~~~~ 162 (275)
T PRK08263 135 SSIGGISAF---------PM---SGIYHASKWALEGMSEA 162 (275)
T ss_pred cChhhcCCC---------CC---ccHHHHHHHHHHHHHHH
Confidence 997554321 11 23466677776666544
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.4e-12 Score=112.74 Aligned_cols=133 Identities=13% Similarity=0.088 Sum_probs=88.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+ . .. +.+.+.+. ....++.++.+|++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~---vi~~~r~-~--~~-~~~~~~~~------------~~~~~~~~~~~Dl~ 64 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAY---VLAVDIA-E--AV-SETVDKIK------------SNGGKAKAYHVDIS 64 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCc-H--HH-HHHHHHHH------------hcCCeEEEEEeecC
Confidence 45789999999999999999999999876 8888886 2 11 11111111 11246888999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~v~ 254 (298)
++. .+..+ ..++|++|||||..... ..+...+++|+.| ++|+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~ 138 (272)
T PRK08589 65 DEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN 138 (272)
T ss_pred CHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 865 33332 34689999999975311 2345567778776 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... .. ...|..+|...+.+.+.+
T Consensus 139 isS~~~~~~~---------~~---~~~Y~asKaal~~l~~~l 168 (272)
T PRK08589 139 TSSFSGQAAD---------LY---RSGYNAAKGAVINFTKSI 168 (272)
T ss_pred eCchhhcCCC---------CC---CchHHHHHHHHHHHHHHH
Confidence 9997543221 11 234666777666666543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.6e-12 Score=110.97 Aligned_cols=112 Identities=16% Similarity=0.207 Sum_probs=78.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~Dv~ 68 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGAD---VILLSRNEEN---LKKAREKIKS-----------ESNVDVSYIVADLT 68 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-----------hcCCceEEEEecCC
Confidence 46899999999999999999999999876 8888886321 1122111110 01246889999999
Q ss_pred CCCCCCCHHHHHHHh------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .++.++ .++|++|||||.... ...|...+++|+.+ ++|++
T Consensus 69 ~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i 142 (263)
T PRK08339 69 KRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS 142 (263)
T ss_pred CHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 875 333333 368999999996432 13456677888777 89999
Q ss_pred eCCccc
Q psy14522 256 STAYTH 261 (298)
Q Consensus 256 SS~~~~ 261 (298)
||+.+.
T Consensus 143 sS~~~~ 148 (263)
T PRK08339 143 TSVAIK 148 (263)
T ss_pred cCcccc
Confidence 998653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8e-12 Score=109.77 Aligned_cols=133 Identities=15% Similarity=0.142 Sum_probs=87.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||++++++|++.|++ |+++.|+... .....+.+. ...++.++.+|++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~-------------~~~~~~~~~~D~~ 63 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGAR---VVVADRDAEA---AERVAAAIA-------------AGGRAFARQGDVG 63 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCe---EEEecCCHHH---HHHHHHHHh-------------cCCeEEEEEcCCC
Confidence 35789999999999999999999999876 8888886421 111111110 1246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+.+++ .++|+|||+|+..... ..+...+++|+.+ +|++
T Consensus 64 ~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 137 (252)
T PRK06138 64 SAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVN 137 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEE
Confidence 875 444433 3789999999975311 2234446677665 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+.... ..+..|..+|...+.+++..
T Consensus 138 ~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 138 TASQLALAGG------------RGRAAYVASKGAIASLTRAM 167 (252)
T ss_pred ECChhhccCC------------CCccHHHHHHHHHHHHHHHH
Confidence 9997543211 11334666777776666543
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.9e-12 Score=110.05 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=86.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+++++|||||+|+||++++++|++.|++ |+++.|+... .+++.+.+. ....++.++.+|+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~d~~~ 63 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK---VAVFDLNREA---AEKVAADIR------------AKGGNAQAFACDITD 63 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCCC
Confidence 5789999999999999999999999876 8888886421 122222111 112468899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.. .++.++ .++|++||+|+.... ...+...+++|+.+ +++++
T Consensus 64 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~i 137 (250)
T TIGR03206 64 RD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNI 137 (250)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 65 444433 368999999986421 12234456677766 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... .. ...|..+|+..+.+.+.
T Consensus 138 ss~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~ 165 (250)
T TIGR03206 138 ASDAARVGS---------SG---EAVYAACKGGLVAFSKT 165 (250)
T ss_pred CchhhccCC---------CC---CchHHHHHHHHHHHHHH
Confidence 997554321 11 22456666665555543
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.5e-12 Score=110.31 Aligned_cols=130 Identities=16% Similarity=0.153 Sum_probs=85.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||+++++.|+++|++ |+++.|+... ....... ...++.++.+|++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~---Vi~~~r~~~~----~~~~~~~--------------~~~~~~~~~~Dl~ 71 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGAR---VALLDRSEDV----AEVAAQL--------------LGGNAKGLVCDVS 71 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH----HHHHHHh--------------hCCceEEEEecCC
Confidence 46889999999999999999999999865 8888886431 1111100 0135678899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 72 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 145 (255)
T PRK06841 72 DSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN 145 (255)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence 865 333332 4689999999975321 2344567778777 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+.... . .+..|..+|...+.+.+.
T Consensus 146 ~sS~~~~~~~---------~---~~~~Y~~sK~a~~~~~~~ 174 (255)
T PRK06841 146 LASQAGVVAL---------E---RHVAYCASKAGVVGMTKV 174 (255)
T ss_pred EcchhhccCC---------C---CCchHHHHHHHHHHHHHH
Confidence 9997543211 1 123455666666655544
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.7e-12 Score=109.29 Aligned_cols=131 Identities=14% Similarity=0.149 Sum_probs=85.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+++||||+|+||+++++.|++.|++ |++..+... .+...... ....++.++.+|+++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~---vv~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~ 63 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR---VVVNYHQSE-----DAAEALAD------------ELGDRAIALQADVTD 63 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe---EEEEcCCCH-----HHHHHHHH------------HhCCceEEEEcCCCC
Confidence 5689999999999999999999999876 665544321 11111111 011468889999988
Q ss_pred CCCCCCHHHHHHHh-------cC-ccEEEEcCcccC---------c----cccHHHHhhccccc----------------
Q psy14522 208 PGLGLSAADRAVLR-------RN-VTVVFHGAATVR---------F----DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~-vd~Vih~A~~~~---------~----~~~~~~~~~~Nv~g---------------- 250 (298)
+. .+..++ .. +|++|||||... + ...+...+++|+.+
T Consensus 64 ~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (253)
T PRK08642 64 RE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG 137 (253)
T ss_pred HH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC
Confidence 65 333333 23 999999998521 1 12334567788776
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++++||..... +..++..|..+|...+.+++.+
T Consensus 138 ~g~iv~iss~~~~~------------~~~~~~~Y~~sK~a~~~l~~~l 173 (253)
T PRK08642 138 FGRIINIGTNLFQN------------PVVPYHDYTTAKAALLGLTRNL 173 (253)
T ss_pred CeEEEEECCccccC------------CCCCccchHHHHHHHHHHHHHH
Confidence 789998864321 2223446788888888887764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=106.91 Aligned_cols=133 Identities=17% Similarity=0.187 Sum_probs=86.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+||||||+|+||++++++|+++|++ |+++.|.... ..+.+.+... ....++.++.+|+.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~~ 67 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGAD---VVVHYRSDEE--AAEELVEAVE------------ALGRRAQAVQADVTD 67 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCCHH--HHHHHHHHHH------------hcCCceEEEECCcCC
Confidence 4679999999999999999999999876 6666665331 1112211111 112568899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..++ ..+|+|||+||..... ..+...+++|+.+ +|+++
T Consensus 68 ~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~ 141 (249)
T PRK12825 68 KA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNI 141 (249)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 65 444333 4689999999965321 2234445566555 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... ..+..|..+|...+.+++.
T Consensus 142 SS~~~~~~~------------~~~~~y~~sK~~~~~~~~~ 169 (249)
T PRK12825 142 SSVAGLPGW------------PGRSNYAAAKAGLVGLTKA 169 (249)
T ss_pred CccccCCCC------------CCchHHHHHHHHHHHHHHH
Confidence 998654221 1234567777777766653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-11 Score=109.24 Aligned_cols=131 Identities=13% Similarity=0.129 Sum_probs=87.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+++||++++++|++.|++ |+++.|... +...+... ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---vv~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGAD---IVGVGVAEA-----PETQAQVE------------ALGRKFHFITADLI 65 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCchH-----HHHHHHHH------------HcCCeEEEEEeCCC
Confidence 45799999999999999999999999877 777777421 11111111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.+ ++|
T Consensus 66 ~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii 139 (251)
T PRK12481 66 QQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII 139 (251)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 875 344333 468999999997432 13456677888776 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... .. +..|..+|..-+.+.+.
T Consensus 140 ~isS~~~~~~~---------~~---~~~Y~asK~a~~~l~~~ 169 (251)
T PRK12481 140 NIASMLSFQGG---------IR---VPSYTASKSAVMGLTRA 169 (251)
T ss_pred EeCChhhcCCC---------CC---CcchHHHHHHHHHHHHH
Confidence 99998654321 11 12456666666655543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.7e-12 Score=110.55 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=84.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+++++||||+|+||++++++|+++|+. |+++ .|... ..+.+...+. ....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~---v~i~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~ 65 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGAL---VAIHYGRNKQ---AADETIREIE------------SNGGKAFLIEADL 65 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHHH------------hcCCcEEEEEcCc
Confidence 34689999999999999999999999876 6554 55421 1111111110 1124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------------CccEEEEcCcccCcc-------ccHHHHhhccccc---------------
Q psy14522 206 SLPGLGLSAADRAVLRR-------------NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------- 250 (298)
+++. .+..+++ ++|++||+||..... ..+...+++|+.|
T Consensus 66 ~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 139 (254)
T PRK12746 66 NSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE 139 (254)
T ss_pred CCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence 9865 4433332 589999999974321 1234456778776
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||..+... ....+.|..+|...|.+.+.
T Consensus 140 ~~~v~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 173 (254)
T PRK12746 140 GRVINISSAEVRLG------------FTGSIAYGLSKGALNTMTLP 173 (254)
T ss_pred CEEEEECCHHhcCC------------CCCCcchHhhHHHHHHHHHH
Confidence 7999999755421 11223466777777766543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-11 Score=107.33 Aligned_cols=135 Identities=16% Similarity=0.158 Sum_probs=88.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++++||||+|+||+++++.|+++|++ |+++.|+... ..+.+.+.+. ....++.++.+|++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFA---VAVNYAGSAA--AADELVAEIE------------AAGGRAIAVQADVA 65 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCCHH--HHHHHHHHHH------------hcCCeEEEEECCCC
Confidence 35789999999999999999999999876 6666654321 1111111111 12257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
++. .+.+++ .++|++|||||.... ...+...+++|+.| +++++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 139 (245)
T PRK12937 66 DAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLS 139 (245)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEe
Confidence 865 444443 368999999997532 12345567788776 789998
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ...+..|..+|...+.+++.+
T Consensus 140 s~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 167 (245)
T PRK12937 140 TSVIALP------------LPGYGPYAASKAAVEGLVHVL 167 (245)
T ss_pred eccccCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8644321 112345677778777776543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.4e-12 Score=111.43 Aligned_cols=136 Identities=20% Similarity=0.182 Sum_probs=90.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. .. ....++.++.+|++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~--------~~--~~~~~~~~~~~Dl~ 68 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAA---VMIVGRNPDK---LAAAAEEIE--------AL--KGAGAVRYEPADVT 68 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHH--------hc--cCCCceEEEEcCCC
Confidence 45789999999999999999999999876 8888886321 111111111 00 00246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..+++ ++|++||+||..... ..+...+++|+.+ +|+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (276)
T PRK05875 69 DED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV 142 (276)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 4444433 689999999964211 2234456667666 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...++.|..+|...|.+++.+
T Consensus 143 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 173 (276)
T PRK05875 143 GISSIAASNT------------HRWFGAYGVTKSAVDHLMKLA 173 (276)
T ss_pred EEechhhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 9999865321 112356778888888887654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7e-12 Score=110.53 Aligned_cols=126 Identities=18% Similarity=0.182 Sum_probs=87.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+... . ....++.++.+|++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~---v~~~~r~~~~--------~---------------~~~~~~~~~~~D~~ 57 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGAT---VVVCGRRAPE--------T---------------VDGRPAEFHAADVR 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCChhh--------h---------------hcCCceEEEEccCC
Confidence 45799999999999999999999999876 8888886431 0 01146788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.+ +||
T Consensus 58 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii 131 (252)
T PRK07856 58 DPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 344333 4579999999964311 2344556677665 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... ...+..|..+|...+.+++.+
T Consensus 132 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~l 162 (252)
T PRK07856 132 NIGSVSGRRP------------SPGTAAYGAAKAGLLNLTRSL 162 (252)
T ss_pred EEcccccCCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 9999755421 112345677777777776543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-11 Score=108.53 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=85.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|..... .+...+.++ ....++.++.+|++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~---vi~~~r~~~~~--~~~~~~~~~------------~~~~~~~~~~~D~~~~ 64 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD---LAINDRPDDEE--LAATQQELR------------ALGVEVIFFPADVADL 64 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecCchhH--HHHHHHHHH------------hcCCceEEEEecCCCH
Confidence 478999999999999999999999876 88888764311 111111111 1124788999999986
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCc---------cccHHHHhhccccc----------------------
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRF---------DENIKVAIAINIFG---------------------- 250 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g---------------------- 250 (298)
. .+..+ ...+|+||||||.... ...+...+++|+.|
T Consensus 65 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 65 S------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 5 33333 2468999999986421 13445567777776
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+++||+.+.... .+ .+.|..+|...|.+++.+
T Consensus 139 ~~~iv~~sS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~l 174 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS---------PN---RGEYCISKAGLSMAAQLF 174 (256)
T ss_pred CcEEEEECChhhccCC---------CC---CcccHHHHHHHHHHHHHH
Confidence 28999997553211 12 234556666666665543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=109.15 Aligned_cols=130 Identities=12% Similarity=0.143 Sum_probs=86.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||.++++.|+++|++ |+++.|.... .+++.+. ...++.++.+|++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~---~~~~~~~---------------~~~~~~~~~~D~~ 62 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGAR---VVIADIKPAR---ARLAALE---------------IGPAAIAVSLDVT 62 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEcCCHHH---HHHHHHH---------------hCCceEEEEccCC
Confidence 35789999999999999999999999876 8888886321 1111111 1145788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.+ +||
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 136 (257)
T PRK07067 63 RQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKII 136 (257)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEE
Confidence 875 343333 368999999997532 13455567788776 589
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||..+.... .+ +..|..+|...+.+.+.
T Consensus 137 ~~sS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~ 166 (257)
T PRK07067 137 NMASQAGRRGE---------AL---VSHYCATKAAVISYTQS 166 (257)
T ss_pred EeCCHHhCCCC---------CC---CchhhhhHHHHHHHHHH
Confidence 99997432211 12 33455666665555543
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.2e-12 Score=109.62 Aligned_cols=134 Identities=17% Similarity=0.264 Sum_probs=90.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.+++++|++.|++ |+.+.|... ..+.+.+.+. ....++.++.+|++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~---Vi~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 67 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAH---VIVSSRKLD---GCQAVADAIV------------AAGGKAEALACHIG 67 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCeEEEEEcCCC
Confidence 45789999999999999999999999876 888888532 1122222111 11235778899998
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----c---ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----D---ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----~---~~~~~~~~~Nv~g------------------~~v 253 (298)
+.. .+..+ ...+|++||+|+.... . ..++..+++|+.+ +++
T Consensus 68 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (252)
T PRK07035 68 EME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIV 141 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 865 33332 3468999999986421 1 2344566777776 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+++..+ ...++.|..+|+..+.+++.+
T Consensus 142 ~~sS~~~~~~------------~~~~~~Y~~sK~al~~~~~~l 172 (252)
T PRK07035 142 NVASVNGVSP------------GDFQGIYSITKAAVISMTKAF 172 (252)
T ss_pred EECchhhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 9999755321 112345778888888887654
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.8e-12 Score=110.38 Aligned_cols=142 Identities=22% Similarity=0.279 Sum_probs=96.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++++|||++||||++.+..+...-++ .+.++++.-.-... .+.++.. ....+.+++.+|+.+.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~-~~~v~idkL~~~s~-~~~l~~~--------------~n~p~ykfv~~di~~~ 69 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPD-YKFVNLDKLDYCSN-LKNLEPV--------------RNSPNYKFVEGDIADA 69 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCC-CcEEEEeecccccc-cchhhhh--------------ccCCCceEeeccccch
Confidence 489999999999999999999998444 44555544211111 1111111 2236889999999986
Q ss_pred CCCCCHHHHHHHh--cCccEEEEcCcccCccccH---HHHhhccccc---------------eEEEEeCC--cccCCCCC
Q psy14522 209 GLGLSAADRAVLR--RNVTVVFHGAATVRFDENI---KVAIAINIFG---------------SFVHVSTA--YTHCPRQE 266 (298)
Q Consensus 209 ~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~~~~---~~~~~~Nv~g---------------~~v~iSS~--~~~~~~~~ 266 (298)
. .+..++ +.+|.|+|.|+..+....+ -.+.+.|+.+ +|||+||- ||.+....
T Consensus 70 ~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~ 143 (331)
T KOG0747|consen 70 D------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA 143 (331)
T ss_pred H------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc
Confidence 5 233333 3799999999987544222 2345667666 99999995 66665554
Q ss_pred cc-CcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 267 ID-EVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 267 ~~-E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.. |...++|.++|+ .+|.+||++++.
T Consensus 144 ~~~E~s~~nPtnpyA---asKaAaE~~v~S 170 (331)
T KOG0747|consen 144 VVGEASLLNPTNPYA---ASKAAAEMLVRS 170 (331)
T ss_pred cccccccCCCCCchH---HHHHHHHHHHHH
Confidence 44 888888988865 556888888764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.7e-12 Score=109.99 Aligned_cols=132 Identities=17% Similarity=0.218 Sum_probs=87.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||+++++.|++.|++ |+++.|+.... ...++.++.+|++
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~r~~~~~------------------------~~~~~~~~~~D~~ 59 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGAR---VVTTARSRPDD------------------------LPEGVEFVAADLT 59 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCE---EEEEeCChhhh------------------------cCCceeEEecCCC
Confidence 56899999999999999999999999876 88888864310 1146788999999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCc---------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRF---------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
+++- .-..+.+.+...++|+||||||.... ...+...+++|+.| ++|++||+
T Consensus 60 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~ 139 (260)
T PRK06523 60 TAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSI 139 (260)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecc
Confidence 8651 00011122223468999999995321 13455667788776 69999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.... ...+..|..+|...+.+.+.+
T Consensus 140 ~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~~ 166 (260)
T PRK06523 140 QRRLPL-----------PESTTAYAAAKAALSTYSKSL 166 (260)
T ss_pred cccCCC-----------CCCcchhHHHHHHHHHHHHHH
Confidence 553210 012335666777766665543
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-11 Score=106.14 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=86.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc-cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG-KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|.... ....+.+.+.+. ....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dl 68 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD---VIVLDIHPMRGRAEADAVAAGIE------------AAGGKALGLAFDV 68 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEcCcccccHHHHHHHHHHHH------------hcCCcEEEEEccC
Confidence 35789999999999999999999999877 7777664321 111111111111 1124788999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc----c---ccHHHHhhccccc-------------------eE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF----D---ENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~----~---~~~~~~~~~Nv~g-------------------~~ 252 (298)
+++. .+..++ .++|.|||+||.... . ..+...+++|+.+ ++
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 142 (249)
T PRK12827 69 RDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRI 142 (249)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEE
Confidence 9865 344333 468999999997541 1 2234445566655 69
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+.... . .+..|..+|...+.+++.+
T Consensus 143 v~~sS~~~~~~~---------~---~~~~y~~sK~a~~~~~~~l 174 (249)
T PRK12827 143 VNIASVAGVRGN---------R---GQVNYAASKAGLIGLTKTL 174 (249)
T ss_pred EEECCchhcCCC---------C---CCchhHHHHHHHHHHHHHH
Confidence 999997543221 1 2234666666666665543
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.4e-12 Score=110.08 Aligned_cols=138 Identities=17% Similarity=0.144 Sum_probs=88.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+.+.|+... .+.+.+.+. ....++.++.+|++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~i~------------~~~~~~~~~~~Dl~ 71 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGAR---VVLSARKAEE---LEEAAAHLE------------ALGIDALWIAADVA 71 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEccCC
Confidence 35799999999999999999999999876 8888886321 111111111 11246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+..++ ..+|+|||+||.... ...+...+++|+.+ +||
T Consensus 72 d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v 145 (259)
T PRK08213 72 DEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII 145 (259)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 875 343322 368999999996421 12333445556554 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+.....+ ...+...|..+|+..|.+++.+
T Consensus 146 ~~sS~~~~~~~~~--------~~~~~~~Y~~sKa~~~~~~~~~ 180 (259)
T PRK08213 146 NVASVAGLGGNPP--------EVMDTIAYNTSKGAVINFTRAL 180 (259)
T ss_pred EECChhhccCCCc--------cccCcchHHHHHHHHHHHHHHH
Confidence 9999744322110 0012346778888888887654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-11 Score=107.85 Aligned_cols=112 Identities=23% Similarity=0.286 Sum_probs=75.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||++++++|+++|++ |+++.+... ...+.+.+.+. ....++.++.+|++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~---v~~~~~~~~--~~~~~~~~~l~------------~~~~~~~~~~~D~~ 66 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAK---VVINYNSSK--EAAENLVNELG------------KEGHDVYAVQADVS 66 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEcCCcH--HHHHHHHHHHH------------hcCCeEEEEECCCC
Confidence 35789999999999999999999999876 665544321 11112211111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ ..+|+||||||..... ..+.+.+++|+.+ +||+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (247)
T PRK12935 67 KVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS 140 (247)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 343333 3589999999975321 3445567788776 7999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+++.
T Consensus 141 ~sS~~~~ 147 (247)
T PRK12935 141 ISSIIGQ 147 (247)
T ss_pred Ecchhhc
Confidence 9998654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.3e-12 Score=109.65 Aligned_cols=134 Identities=16% Similarity=0.171 Sum_probs=89.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.+++++|+++|++ |+++.|+... .+++.+.+. ....++.++.+|++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 66 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAK---VVVADRDAAG---GEETVALIR------------EAGGEALFVACDVT 66 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 45789999999999999999999999866 8888886431 112211111 11246889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v 253 (298)
+.. .+..+ ..++|++|||||..... ..+...+++|+.+ +++
T Consensus 67 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii 140 (253)
T PRK06172 67 RDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIV 140 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 33333 24679999999964211 2344556677766 789
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...+..|..+|...+.+.+.+
T Consensus 141 ~~sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 171 (253)
T PRK06172 141 NTASVAGLGA------------APKMSIYAASKHAVIGLTKSA 171 (253)
T ss_pred EECchhhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 9999754322 112345777777777666543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.9e-12 Score=112.20 Aligned_cols=141 Identities=15% Similarity=0.070 Sum_probs=87.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||+++++.|+++|++ |++++|+.... +.+.+.... .....++.++.+|+++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~D~~d 65 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYL---VIATMRNPEKQ---ENLLSQATQ----------LNLQQNIKVQQLDVTD 65 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCE---EEEEeCCHHHH---HHHHHHHHh----------cCCCCceeEEecCCCC
Confidence 4688999999999999999999999876 88888864321 112111110 0112478899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcccC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYTHC 262 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~~~ 262 (298)
+.--............+|+||||||..... ..+...+.+|+.| +||++||..+..
T Consensus 66 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~ 145 (280)
T PRK06914 66 QNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV 145 (280)
T ss_pred HHHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC
Confidence 751000111112234689999999965321 2334455677665 789999975432
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. ....+.|..+|...+.+++..
T Consensus 146 ~------------~~~~~~Y~~sK~~~~~~~~~l 167 (280)
T PRK06914 146 G------------FPGLSPYVSSKYALEGFSESL 167 (280)
T ss_pred C------------CCCCchhHHhHHHHHHHHHHH
Confidence 1 112335667777777766543
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=108.70 Aligned_cols=136 Identities=11% Similarity=0.140 Sum_probs=86.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+++||+++++.|++.|.+ |++..|+.. +..+.+.+.+.. ....++.++.+|++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D~~ 69 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVN---IAFTYNSNV--EEANKIAEDLEQ-----------KYGIKAKAYPLNIL 69 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCH--HHHHHHHHHHHH-----------hcCCceEEEEcCCC
Confidence 46899999999999999999999999876 666655422 111122111110 11247889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccC------c-------cccHHHHhhccccc----------------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVR------F-------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~------~-------~~~~~~~~~~Nv~g---------------- 250 (298)
+++ .+..+ +.++|++|||||... + ...+...+.+|+.+
T Consensus 70 ~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 143 (260)
T PRK08416 70 EPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG 143 (260)
T ss_pred CHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC
Confidence 865 33333 246899999998531 1 12234456666654
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+... ...+..|..+|+..+.+.+.+
T Consensus 144 ~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 179 (260)
T PRK08416 144 GGSIISLSSTGNLVY------------IENYAGHGTSKAAVETMVKYA 179 (260)
T ss_pred CEEEEEEeccccccC------------CCCcccchhhHHHHHHHHHHH
Confidence 8999999754321 112345777777777776543
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=108.19 Aligned_cols=130 Identities=18% Similarity=0.287 Sum_probs=86.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|++.|++ |+++.|... ...+.+ .. .++.++.+|++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~---v~~~~~~~~--~~~~~l----~~--------------~~~~~~~~Dl~ 61 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAK---VAVLYNSAE--NEAKEL----RE--------------KGVFTIKCDVG 61 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCcH--HHHHHH----Hh--------------CCCeEEEecCC
Confidence 45799999999999999999999999876 766655432 111111 10 24778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| ++|+
T Consensus 62 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~ 135 (255)
T PRK06463 62 NRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVN 135 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 343332 468999999997431 12345567788877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... ......|..+|...+.+.+.+
T Consensus 136 isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l 166 (255)
T PRK06463 136 IASNAGIGTA-----------AEGTTFYAITKAGIIILTRRL 166 (255)
T ss_pred EcCHHhCCCC-----------CCCccHhHHHHHHHHHHHHHH
Confidence 9997654211 011234667777777666544
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-11 Score=108.58 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=84.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|+... .+++...+. ....++.++.+|++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 63 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK---VAIVDYNEET---AQAAADKLS------------KDGGKAIAVKADVSDR 63 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEECCCCCH
Confidence 679999999999999999999999866 8888886421 112222111 1124678899999987
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEE
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~i 255 (298)
. .+..+ ..++|++|||||.... ...+...+++|+.+ +++++
T Consensus 64 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 64 D------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5 33333 2468999999986421 12344556777765 78999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... +. ...|..+|+..+.+.+.
T Consensus 138 sS~~~~~~~---------~~---~~~Y~~sK~a~~~~~~~ 165 (256)
T PRK08643 138 TSQAGVVGN---------PE---LAVYSSTKFAVRGLTQT 165 (256)
T ss_pred CccccccCC---------CC---CchhHHHHHHHHHHHHH
Confidence 987543211 11 23466666766655544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.7e-11 Score=106.30 Aligned_cols=132 Identities=12% Similarity=0.127 Sum_probs=88.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||.+++++|+++|++ |+++.|+.. ..+.+.+. ....++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---vi~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~ 62 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGAD---IVGAGRSEP-----SETQQQVE------------ALGRRFLSLTADLS 62 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCchH-----HHHHHHHH------------hcCCceEEEECCCC
Confidence 46899999999999999999999999876 888888532 11111111 11246889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+ ..++|++|||||..... ..+...+++|+.+ ++|
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 63 DIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 865 33322 24699999999975321 2445566777666 689
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+..+. .. ...|..+|+..+.+.+.+
T Consensus 137 ~~sS~~~~~~~---------~~---~~~Y~~sKaa~~~~~~~l 167 (248)
T TIGR01832 137 NIASMLSFQGG---------IR---VPSYTASKHGVAGLTKLL 167 (248)
T ss_pred EEecHHhccCC---------CC---CchhHHHHHHHHHHHHHH
Confidence 99997544221 11 224666777777766544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.4e-11 Score=106.49 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=84.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+++|||++|+||++++++|++.|+. |++..+... ....+.+.+ +. ....++..+.+|+++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~---vv~~~~~~~-~~~~~~~~~-~~------------~~~~~~~~~~~D~~~ 64 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFK---VVAGCGPNS-PRRVKWLED-QK------------ALGFDFIASEGNVGD 64 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCCh-HHHHHHHHH-HH------------hcCCcEEEEEcCCCC
Confidence 5789999999999999999999999876 666443221 111111111 11 112467788999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.. .+..+ ..++|+||||||.... ...+...+++|+.+ +++++
T Consensus 65 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 138 (246)
T PRK12938 65 WD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINI 138 (246)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 65 33333 3468999999997531 13445567777776 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+... ...+..|..+|...+.+.+.
T Consensus 139 sS~~~~~~------------~~~~~~y~~sK~a~~~~~~~ 166 (246)
T PRK12938 139 SSVNGQKG------------QFGQTNYSTAKAGIHGFTMS 166 (246)
T ss_pred echhccCC------------CCCChhHHHHHHHHHHHHHH
Confidence 99754322 11234456666655555443
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.1e-11 Score=110.39 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=88.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|+++|++ |++..|+.... ..+.+.+... ....++.++.+|++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~---Vi~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~Dl~ 110 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAISYLPVEEE-DAQDVKKIIE------------ECGRKAVLLPGDLS 110 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEecCCcchh-hHHHHHHHHH------------HcCCeEEEEEccCC
Confidence 56789999999999999999999999877 77766653221 1222222221 11246778899999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccC----c----cccHHHHhhccccc----------------eEEEEeCCccc
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVR----F----DENIKVAIAINIFG----------------SFVHVSTAYTH 261 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~----~----~~~~~~~~~~Nv~g----------------~~v~iSS~~~~ 261 (298)
+.+- .-..........++|++|||||... + ...+...+++|+.| +||++||+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~ 190 (294)
T PRK07985 111 DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY 190 (294)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc
Confidence 8641 0001112222346899999998632 1 13455677888887 79999998654
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
... | .+..|..+|+..+.+.+.
T Consensus 191 ~~~----------~--~~~~Y~asKaal~~l~~~ 212 (294)
T PRK07985 191 QPS----------P--HLLDYAATKAAILNYSRG 212 (294)
T ss_pred cCC----------C--CcchhHHHHHHHHHHHHH
Confidence 221 1 123466666666655443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=109.10 Aligned_cols=134 Identities=11% Similarity=0.149 Sum_probs=90.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|.. |+++.|.... .+++...+. ....++.++.+|++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~---vv~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 70 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADA---ANHVVDEIQ------------QLGGQAFACRCDIT 70 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46899999999999999999999999876 7777775321 122222111 11246788899999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc---c---ccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF---D---ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~---~---~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+.+ .+.++ ..++|++|||||.... . ..+...+++|+.| ++|++
T Consensus 71 ~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 144 (255)
T PRK06113 71 SEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 865 33332 3468999999996432 1 2344456778777 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+.. +...+..|..+|+..+.+++.+
T Consensus 145 sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 173 (255)
T PRK06113 145 TSMAAEN------------KNINMTSYASSKAAASHLVRNM 173 (255)
T ss_pred ecccccC------------CCCCcchhHHHHHHHHHHHHHH
Confidence 9976432 1122345788888888887654
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.9e-11 Score=108.47 Aligned_cols=137 Identities=18% Similarity=0.228 Sum_probs=87.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~l~~------------~~~~~~~~~~~D~~ 61 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGAR---VAVLDKSAA------GLQELEA------------AHGDAVVGVEGDVR 61 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHh------------hcCCceEEEEeccC
Confidence 35799999999999999999999999876 888887632 1221111 11246788999998
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------c-----ccHHHHhhccccc-----------------eEEEEe
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------D-----ENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~-----~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
+..- .-....+.+...++|++|||||.... . ..+...+++|+.+ ++|++|
T Consensus 62 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~s 141 (262)
T TIGR03325 62 SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTI 141 (262)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 8641 00011122223478999999986321 1 1355678888887 688998
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+..+ ......|..+|...+.+.+.+
T Consensus 142 S~~~~~~------------~~~~~~Y~~sKaa~~~l~~~l 169 (262)
T TIGR03325 142 SNAGFYP------------NGGGPLYTAAKHAVVGLVKEL 169 (262)
T ss_pred ccceecC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8754321 111234666777777666543
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=109.08 Aligned_cols=140 Identities=18% Similarity=0.160 Sum_probs=87.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+|+||||||++|++++++|++.|++ |+++.|..+. ..... + ...+++++.+|+.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~---V~~~~R~~~~------~~~~~------------~-~~~~~~~~~~Dl~d 73 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFA---VKAGVRDVDK------AKTSL------------P-QDPSLQIVRADVTE 73 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCE---EEEEecCHHH------HHHhc------------c-cCCceEEEEeeCCC
Confidence 4689999999999999999999999876 8888887431 11110 0 11468899999987
Q ss_pred CCCCCCHHHHHHHh-cCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCC
Q psy14522 208 PGLGLSAADRAVLR-RNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFY 272 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~ 272 (298)
.. ..+...+ .++|+|||+++........ ..+.+|+.+ +|||+||+.+++..........
T Consensus 74 ~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~~-~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~ 147 (251)
T PLN00141 74 GS-----DKLVEAIGDDSDAVICATGFRRSFDPF-APWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPA 147 (251)
T ss_pred CH-----HHHHHHhhcCCCEEEECCCCCcCCCCC-CceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcc
Confidence 41 2455555 5899999999863211111 011223222 8999999865432111000000
Q ss_pred CCCCChHHHHHHHHHHHHHHHhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+.++++.+...|+.+|++++.
T Consensus 148 ~~~~~~~~~~~~~k~~~e~~l~~ 170 (251)
T PLN00141 148 YIFLNLFGLTLVAKLQAEKYIRK 170 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 11224466666789999987754
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-11 Score=106.13 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=86.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.++++|||||+|+||++++++|+++|++ |++..|.... +....... +. ....++.++.+|+++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~-----~~~~~~~~-----~~----~~~~~~~~~~~D~~~ 67 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSL---VVVNAKKRAE-----EMNETLKM-----VK----ENGGEGIGVLADVST 67 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCChH-----HHHHHHHH-----HH----HcCCeeEEEEeccCC
Confidence 4689999999999999999999999876 6666654321 11111110 00 112356788899988
Q ss_pred CCC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcccCC
Q psy14522 208 PGL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYTHCP 263 (298)
Q Consensus 208 ~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~ 263 (298)
+.- ....+.+.....++|+|||+||..... ..+...+++|+.+ +||++||..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~- 146 (252)
T PRK06077 68 REGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR- 146 (252)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-
Confidence 650 000112222234689999999963221 1234567788876 699999986542
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+..+...|..+|...|.+.+..
T Consensus 147 -----------~~~~~~~Y~~sK~~~~~~~~~l 168 (252)
T PRK06077 147 -----------PAYGLSIYGAMKAAVINLTKYL 168 (252)
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHH
Confidence 1222345666777777776643
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=108.67 Aligned_cols=130 Identities=12% Similarity=0.140 Sum_probs=86.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... +++... ....++.++.+|++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~------~~~~~~------------~~~~~~~~~~~Dl~ 62 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGAR---VAIVDIDADN------GAAVAA------------SLGERARFIATDIT 62 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHH------------HhCCeeEEEEecCC
Confidence 45789999999999999999999999876 8888886421 111111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc------cccHHHHhhccccc-----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF------DENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
+.. .+..++ ..+|++|||||.... ...+...+++|+.+ ++|++|
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 63 DDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 865 343333 468999999996421 13445566777766 689999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.... . .+..|..+|...+.+.+.
T Consensus 137 S~~~~~~~---------~---~~~~Y~asKaa~~~~~~~ 163 (261)
T PRK08265 137 SISAKFAQ---------T---GRWLYPASKAAIRQLTRS 163 (261)
T ss_pred chhhccCC---------C---CCchhHHHHHHHHHHHHH
Confidence 97543211 1 123456666666665544
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-11 Score=114.06 Aligned_cols=132 Identities=16% Similarity=0.170 Sum_probs=88.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++|+||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~---Vvl~~R~~~---~l~~~~~~l~------------~~g~~~~~v~~Dv~ 67 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAK---VVLLARGEE---GLEALAAEIR------------AAGGEALAVVADVA 67 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------HcCCcEEEEEecCC
Confidence 45789999999999999999999999876 888888632 1112211111 11246888999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .++.+ +.++|++|||||...+. ..+...+++|+.| +||+
T Consensus 68 d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~ 141 (334)
T PRK07109 68 DAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQ 141 (334)
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 34433 34799999999964321 2345567777776 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+||+.+.... | .++.|..+|+..+.+.+
T Consensus 142 isS~~~~~~~----------~--~~~~Y~asK~a~~~~~~ 169 (334)
T PRK07109 142 VGSALAYRSI----------P--LQSAYCAAKHAIRGFTD 169 (334)
T ss_pred eCChhhccCC----------C--cchHHHHHHHHHHHHHH
Confidence 9998665321 1 23456666666555443
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=109.32 Aligned_cols=109 Identities=22% Similarity=0.304 Sum_probs=75.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||+++++.|+++|++ |+++.|.... ....+.+. ....++.++.+|++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~---Vv~~~r~~~~----~~~~~~~~------------~~~~~~~~~~~Dl~ 64 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGAN---LILLDISPEI----EKLADELC------------GRGHRCTAVVADVR 64 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHHH----HHHHHHHH------------HhCCceEEEECCCC
Confidence 45789999999999999999999999876 8888886421 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+ ...+|++|||||..... ..++..+++|+.+ ++|+
T Consensus 65 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (263)
T PRK08226 65 DPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM 138 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 33333 33689999999974321 2334456777776 7999
Q ss_pred EeCCcc
Q psy14522 255 VSTAYT 260 (298)
Q Consensus 255 iSS~~~ 260 (298)
+||+.+
T Consensus 139 isS~~~ 144 (263)
T PRK08226 139 MSSVTG 144 (263)
T ss_pred ECcHHh
Confidence 999754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.6e-12 Score=112.51 Aligned_cols=134 Identities=13% Similarity=0.184 Sum_probs=87.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||.++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~---Vi~~~R~~~---~l~~~~~~l~------------~~~~~~~~~~~Dl~ 99 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGAT---VVAVARRED---LLDAVADRIT------------RAGGDAMAVPCDLS 99 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46789999999999999999999999876 888888632 1112211111 11245778999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc---------ccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD---------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g------------------~~ 252 (298)
+.. .+..+++ ++|++|||||..... ..+...+++|+.| ++
T Consensus 100 d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 173 (293)
T PRK05866 100 DLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHI 173 (293)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 865 4444433 799999999975321 2233456777765 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+.... .| ..+.|..+|+..+.+.+.
T Consensus 174 v~isS~~~~~~~---------~p--~~~~Y~asKaal~~l~~~ 205 (293)
T PRK05866 174 INVATWGVLSEA---------SP--LFSVYNASKAALSAVSRV 205 (293)
T ss_pred EEECChhhcCCC---------CC--CcchHHHHHHHHHHHHHH
Confidence 999996432210 01 123567777777666554
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=107.75 Aligned_cols=126 Identities=20% Similarity=0.213 Sum_probs=87.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||++++++|++.|++ |+++.|+.... +.. ....++.++.+|+++..
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~---v~~~~r~~~~~-----~~~---------------~~~~~~~~~~~D~~~~~ 58 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIA---VLGVARSRHPS-----LAA---------------AAGERLAEVELDLSDAA 58 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCE---EEEEecCcchh-----hhh---------------ccCCeEEEEEeccCCHH
Confidence 57999999999999999999999876 88888864321 100 11246888999999865
Q ss_pred CCCCHHHHHHHh-----------cCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eE
Q psy14522 210 LGLSAADRAVLR-----------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 210 ~gl~~~~~~~l~-----------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~ 252 (298)
.+..++ ..+|++|||||..... ..+...+++|+.| ++
T Consensus 59 ------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 132 (243)
T PRK07023 59 ------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRI 132 (243)
T ss_pred ------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEE
Confidence 333311 2579999999975321 2334556777776 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+.. +...+..|..+|...|.+++.+
T Consensus 133 v~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~ 164 (243)
T PRK07023 133 LHISSGAARN------------AYAGWSVYCATKAALDHHARAV 164 (243)
T ss_pred EEEeChhhcC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 9999975432 2234567888888888887654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=108.36 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=86.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|...... ..++.++.+|++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~---v~~~~~~~~~~~------------------------~~~~~~~~~D~~ 59 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGAN---VVNADIHGGDGQ------------------------HENYQFVPTDVS 59 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCccccc------------------------cCceEEEEccCC
Confidence 46799999999999999999999999876 777777643210 136778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc----------------cccHHHHhhccccc-------------
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF----------------DENIKVAIAINIFG------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~----------------~~~~~~~~~~Nv~g------------- 250 (298)
++. .+..++ ..+|++|||||.... ...+...+++|+.|
T Consensus 60 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (266)
T PRK06171 60 SAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMV 133 (266)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHH
Confidence 865 343332 468999999996421 12345567888877
Q ss_pred -----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+.... . ....|..+|...+.+.+.+
T Consensus 134 ~~~~g~iv~isS~~~~~~~---------~---~~~~Y~~sK~a~~~l~~~l 172 (266)
T PRK06171 134 KQHDGVIVNMSSEAGLEGS---------E---GQSCYAATKAALNSFTRSW 172 (266)
T ss_pred hcCCcEEEEEccccccCCC---------C---CCchhHHHHHHHHHHHHHH
Confidence 69999998654221 1 1234666677766666543
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=116.84 Aligned_cols=130 Identities=22% Similarity=0.229 Sum_probs=85.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|||||||||++++++|+++|++ |++++|............+.. ....+++++.+|++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~-------------~~~~~v~~v~~Dl~ 121 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN---VVAVAREKSGIRGKNGKEDTK-------------KELPGAEVVFGDVT 121 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEEechhhccccchhhHHh-------------hhcCCceEEEeeCC
Confidence 35789999999999999999999999876 899999754211100000000 01247889999999
Q ss_pred CCCCCCCHHHHHHHhc----CccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCcc
Q psy14522 207 LPGLGLSAADRAVLRR----NVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEID 268 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~----~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~ 268 (298)
+++ .+..+++ ++|+||||++..... ....+++|+.+ +||++||.++..
T Consensus 122 d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~~--~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~------ 187 (390)
T PLN02657 122 DAD------SLRKVLFSEGDPVDVVVSCLASRTGG--VKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK------ 187 (390)
T ss_pred CHH------HHHHHHHHhCCCCcEEEECCccCCCC--CccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC------
Confidence 976 6777666 599999998853211 01112222222 899999986431
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|. ..|..+|...|+.+..
T Consensus 188 ------p~---~~~~~sK~~~E~~l~~ 205 (390)
T PLN02657 188 ------PL---LEFQRAKLKFEAELQA 205 (390)
T ss_pred ------cc---hHHHHHHHHHHHHHHh
Confidence 11 2345678888887753
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.7e-11 Score=116.12 Aligned_cols=149 Identities=18% Similarity=0.146 Sum_probs=93.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...+++||||||+|+||++++++|++.|++ |++++|+... .+++.+.+.... +.........++.++.+|+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~---Vval~Rn~ek---l~~l~~~l~~~~---L~~~Ga~~~~~v~iV~gDL 147 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFR---VRAGVRSAQR---AESLVQSVKQMK---LDVEGTQPVEKLEIVECDL 147 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHhhhhc---cccccccccCceEEEEecC
Confidence 346889999999999999999999999877 8888887432 112211111000 0000000124688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCcc-ccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFD-ENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEV 270 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~ 270 (298)
.+.+ .+...++++|+|||++|..... ..+...+.+|+.| +||++||+++.... ..+.
T Consensus 148 tD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p~~ 219 (576)
T PLN03209 148 EKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FPAA 219 (576)
T ss_pred CCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--cccc
Confidence 9865 6778889999999999865321 1233334455444 99999998653111 1111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
......+|...|..+|+.|.+
T Consensus 220 ----~~~sk~~~~~~KraaE~~L~~ 240 (576)
T PLN03209 220 ----ILNLFWGVLCWKRKAEEALIA 240 (576)
T ss_pred ----chhhHHHHHHHHHHHHHHHHH
Confidence 122345566677788877753
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-11 Score=109.36 Aligned_cols=134 Identities=12% Similarity=0.074 Sum_probs=88.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|+++|++ |++..|+... .+.+.+.+. ....++.++.+|++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~---vvl~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~ 68 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAE---IIINDITAER---AELAVAKLR------------QEGIKAHAAPFNVT 68 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCHHH---HHHHHHHHH------------hcCCeEEEEecCCC
Confidence 46789999999999999999999999876 8888886321 111111111 11246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.+ +||+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK08085 69 HKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN 142 (254)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 875 343333 358999999996431 13455567778777 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... . .+..|..+|...+.+.+.+
T Consensus 143 isS~~~~~~~---------~---~~~~Y~~sK~a~~~~~~~l 172 (254)
T PRK08085 143 ICSMQSELGR---------D---TITPYAASKGAVKMLTRGM 172 (254)
T ss_pred EccchhccCC---------C---CCcchHHHHHHHHHHHHHH
Confidence 9997543211 1 2234666777777776654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-11 Score=106.30 Aligned_cols=132 Identities=11% Similarity=0.092 Sum_probs=85.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|++.|++ |+++.|... ...+++.+.+. ....++.++.+|++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~---V~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 64 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD---IGITWHSDE--EGAKETAEEVR------------SHGVRAEIRQLDLSDL 64 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCCh--HHHHHHHHHHH------------hcCCceEEEEccCCCH
Confidence 578999999999999999999999876 766655432 11122222211 1125788999999986
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEE
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~i 255 (298)
. .+..+ ...+|++|||||..... ..+...+.+|+.+ ++|++
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 65 P------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5 33333 24689999999975321 2344556777776 69999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.. +..++..|..+|...+.+++.
T Consensus 139 sS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~ 166 (256)
T PRK12743 139 TSVHEHT------------PLPGASAYTAAKHALGGLTKA 166 (256)
T ss_pred eeccccC------------CCCCcchhHHHHHHHHHHHHH
Confidence 9975321 112234566667766666554
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=107.58 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=89.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 66 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGAT---VAFNDGLAAE---ARELAAALE------------AAGGRAHAIAADLA 66 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 45789999999999999999999999876 8887775321 111211111 11246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|+|||+||..... ..+...+++|+.+ +||+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 140 (250)
T PRK12939 67 DPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN 140 (250)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 865 444333 4689999999975321 2334445566665 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ...++.|..+|...+.+++.+
T Consensus 141 isS~~~~~~------------~~~~~~y~~sK~~~~~~~~~l 170 (250)
T PRK12939 141 LASDTALWG------------APKLGAYVASKGAVIGMTRSL 170 (250)
T ss_pred ECchhhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 999754321 112345777788888777653
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=107.32 Aligned_cols=127 Identities=19% Similarity=0.209 Sum_probs=83.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||.++++.|+++|++ |+++.|+.. ++..... ....++.++.+|+++..
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl~~~~ 59 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQE------RLQELKD------------ELGDNLYIAQLDVRNRA 59 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhccceEEEEecCCCHH
Confidence 57999999999999999999999876 888888642 1111111 01146788999999865
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccC--------ccccHHHHhhccccc------------------eEEEEe
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVR--------FDENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~--------~~~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
.+..++ .++|++||+||... ....+...+++|+.| ++|++|
T Consensus 60 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 133 (248)
T PRK10538 60 ------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 333332 37999999998632 112345566777766 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+... ..+ +..|..+|...+.+.+.
T Consensus 134 S~~~~~~---------~~~---~~~Y~~sK~~~~~~~~~ 160 (248)
T PRK10538 134 STAGSWP---------YAG---GNVYGATKAFVRQFSLN 160 (248)
T ss_pred CcccCCC---------CCC---CchhHHHHHHHHHHHHH
Confidence 9754311 112 23456666666666543
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-11 Score=109.08 Aligned_cols=130 Identities=21% Similarity=0.228 Sum_probs=87.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+++||||+|+||.++++.|++.|++ |++++|+.. ++.+.... + ... .++.++.+|++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~---v~~~~r~~~------~~~~~~~~-----~----~~~-~~~~~~~~Dl~~~ 62 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT---LGLVARRTD------ALQAFAAR-----L----PKA-ARVSVYAADVRDA 62 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh-----c----ccC-CeeEEEEcCCCCH
Confidence 478999999999999999999999876 888888632 22211110 0 111 2688999999986
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEEEE
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+ .+.+++ ..+|++|||||..... ..+...+++|+.| +||++
T Consensus 63 ~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~i 136 (257)
T PRK07024 63 D------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGI 136 (257)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5 343332 3489999999964311 2345567888887 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+.... | ....|..+|+..+.+.+.
T Consensus 137 sS~~~~~~~----------~--~~~~Y~asK~a~~~~~~~ 164 (257)
T PRK07024 137 ASVAGVRGL----------P--GAGAYSASKAAAIKYLES 164 (257)
T ss_pred echhhcCCC----------C--CCcchHHHHHHHHHHHHH
Confidence 997654211 1 123577778877777654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=110.49 Aligned_cols=134 Identities=17% Similarity=0.197 Sum_probs=88.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
...|+++||||+|+||++++++|+++|+. |+++.|+... .+.+...+. ....++.++.+|++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 69 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFP---VALGARRVEK---CEELVDKIR------------ADGGEAVAFPLDVT 69 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEECCCC
Confidence 34679999999999999999999999865 7777775321 111111111 11246788899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ ..+|++|||||..... ..+...+.+|+.| +||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~ 143 (274)
T PRK07775 70 DPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIF 143 (274)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 875 444333 3689999999975321 2334456777776 5999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... ++ ...|..+|+..|.+++..
T Consensus 144 isS~~~~~~~---------~~---~~~Y~~sK~a~~~l~~~~ 173 (274)
T PRK07775 144 VGSDVALRQR---------PH---MGAYGAAKAGLEAMVTNL 173 (274)
T ss_pred ECChHhcCCC---------CC---cchHHHHHHHHHHHHHHH
Confidence 9997554321 11 234777888888887654
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=108.11 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=86.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||.++++.|++.|++ |++++|.... .+.+.+.+.. ....++.++.+|++++.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~---Vi~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~ 64 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR---LYLAARDVER---LERLADDLRA-----------RGAVAVSTHELDILDTA 64 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE---EEEEeCCHHH---HHHHHHHHHH-----------hcCCeEEEEecCCCChH
Confidence 68999999999999999999999876 8989887431 1111111110 11247889999999875
Q ss_pred CCCCHHHHHHHhc----CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 210 LGLSAADRAVLRR----NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 210 ~gl~~~~~~~l~~----~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
++..+++ .+|++||+||..... ..+...+++|+.| +++++||.++
T Consensus 65 ------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 138 (243)
T PRK07102 65 ------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG 138 (243)
T ss_pred ------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc
Confidence 4444433 579999999864321 1223456777776 6999999864
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.... + .+..|..+|+..+.+.+.
T Consensus 139 ~~~~----------~--~~~~Y~~sK~a~~~~~~~ 161 (243)
T PRK07102 139 DRGR----------A--SNYVYGSAKAALTAFLSG 161 (243)
T ss_pred cCCC----------C--CCcccHHHHHHHHHHHHH
Confidence 3221 1 123466677776666554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-11 Score=109.53 Aligned_cols=132 Identities=14% Similarity=0.178 Sum_probs=86.7
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ ++||+++++.|++.|.+ |++..|+.. ..+++++.... .... .++.+|
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~---Vil~~r~~~---~~~~~~~~~~~------------~~~~-~~~~~D 63 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAE---LAFTYLNEA---LKKRVEPIAQE------------LGSD-YVYELD 63 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEecCHH---HHHHHHHHHHh------------cCCc-eEEEec
Confidence 457999999997 79999999999999876 777777531 11222222110 1123 578899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
+++.+ .+..+ ..++|++|||||.... ...+...+++|+.|
T Consensus 64 v~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 137 (274)
T PRK08415 64 VSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA 137 (274)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence 99875 33332 3468999999996421 13456678899888
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+... ...+..|..+|+.-+.+.+.
T Consensus 138 ~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~ 170 (274)
T PRK08415 138 SVLTLSYLGGVKY------------VPHYNVMGVAKAALESSVRY 170 (274)
T ss_pred cEEEEecCCCccC------------CCcchhhhhHHHHHHHHHHH
Confidence 8999999754321 11244566677766655543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=109.08 Aligned_cols=134 Identities=9% Similarity=0.109 Sum_probs=87.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.+++++|+++|++ |+++.|.... .++..+.+. ....++.++.+|++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~---vv~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 69 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGAT---IVFNDINQEL---VDKGLAAYR------------ELGIEAHGYVCDVT 69 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 36789999999999999999999999876 7777776321 112211111 11246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ ..+|++|||||..... ..+...+++|+.| +||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07097 70 DED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIIN 143 (265)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 344333 4589999999975321 3345567778776 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... .+ +..|..+|...+.+.+.+
T Consensus 144 isS~~~~~~~---------~~---~~~Y~~sKaal~~l~~~l 173 (265)
T PRK07097 144 ICSMMSELGR---------ET---VSAYAAAKGGLKMLTKNI 173 (265)
T ss_pred EcCccccCCC---------CC---CccHHHHHHHHHHHHHHH
Confidence 9997543211 12 234556666666665543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=107.25 Aligned_cols=110 Identities=20% Similarity=0.354 Sum_probs=76.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++|||++|+||.+++++|+++|++ |++++|+... .+.+.+.+. ....++.++.+|+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~---Vi~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~ 67 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVN---VGLLARTEEN---LKAVAEEVE------------AYGVKVVIATADVSD 67 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------HhCCeEEEEECCCCC
Confidence 4689999999999999999999999866 8888887421 111111111 112478889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..++ .++|+|||+||..... ..+.+.+++|+.+ ++|++
T Consensus 68 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 141 (239)
T PRK07666 68 YE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINI 141 (239)
T ss_pred HH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 65 444443 3799999999864321 2334556777765 68999
Q ss_pred eCCccc
Q psy14522 256 STAYTH 261 (298)
Q Consensus 256 SS~~~~ 261 (298)
||..+.
T Consensus 142 ss~~~~ 147 (239)
T PRK07666 142 SSTAGQ 147 (239)
T ss_pred cchhhc
Confidence 997543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.7e-11 Score=105.46 Aligned_cols=131 Identities=15% Similarity=0.202 Sum_probs=85.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|++ |++..|... ++.++.... .++.++.+|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~---v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~ 61 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGAN---VRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA 61 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence 45789999999999999999999999876 766655421 111111110 13467788998
Q ss_pred CCCCCCCHHHHHHHh---cCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcc
Q psy14522 207 LPGLGLSAADRAVLR---RNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYT 260 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~---~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~ 260 (298)
+.. .+..+. .++|++|||||..... ..+...+++|+.| ++|++||..+
T Consensus 62 ~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 62 DRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 754 333333 4589999999974321 2345567777766 8999999754
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
... |......|..+|+..|.+++.+
T Consensus 136 ~~~-----------~~~~~~~Y~~sKaa~~~~~~~l 160 (237)
T PRK12742 136 DRM-----------PVAGMAAYAASKSALQGMARGL 160 (237)
T ss_pred ccC-----------CCCCCcchHHhHHHHHHHHHHH
Confidence 211 1112345677788888776643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=4e-11 Score=104.66 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=85.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++|||++|+||+++++.|++.|++ |+++.|+... ..+.+.+.+. ....++.++.+|++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGAN---VVINYASSEA--GAEALVAEIG------------ALGGKALAVQGDVS 65 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCchh--HHHHHHHHHH------------hcCCceEEEEcCCC
Confidence 35789999999999999999999999876 7777775421 1111111111 11257888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|+|||+|+..... ..+...+.+|+.+ +|++
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~ 139 (248)
T PRK05557 66 DAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN 139 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 865 333332 3689999999974321 2233445666665 5999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... . ....|..+|...+.+++.
T Consensus 140 iss~~~~~~~---------~---~~~~y~~sk~a~~~~~~~ 168 (248)
T PRK05557 140 ISSVVGLMGN---------P---GQANYAASKAGVIGFTKS 168 (248)
T ss_pred EcccccCcCC---------C---CCchhHHHHHHHHHHHHH
Confidence 9997433211 1 123466677766666543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.1e-11 Score=106.31 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=86.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||+++++.|++.|++ +|+++.|+.... .+ ...++.++.+|+++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~--~V~~~~r~~~~~------~~----------------~~~~~~~~~~D~~~ 60 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAA--KVYAAARDPESV------TD----------------LGPRVVPLQLDVTD 60 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcc--cEEEEecChhhh------hh----------------cCCceEEEEecCCC
Confidence 5689999999999999999999999861 388888864321 00 12578899999998
Q ss_pred CCCCCCHHHHHHHhc---CccEEEEcCcc-cCc-------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 208 PGLGLSAADRAVLRR---NVTVVFHGAAT-VRF-------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~---~vd~Vih~A~~-~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
.+ .+..+.+ .+|+|||+||. ... ...+...+++|+.+ +|+++||.
T Consensus 61 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 134 (238)
T PRK08264 61 PA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSV 134 (238)
T ss_pred HH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 65 4555544 58999999997 211 12334456667665 59999997
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+... ...+..|..+|...|.+.+.
T Consensus 135 ~~~~~------------~~~~~~y~~sK~a~~~~~~~ 159 (238)
T PRK08264 135 LSWVN------------FPNLGTYSASKAAAWSLTQA 159 (238)
T ss_pred hhccC------------CCCchHhHHHHHHHHHHHHH
Confidence 55321 12234566777777766554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.6e-11 Score=104.69 Aligned_cols=131 Identities=18% Similarity=0.183 Sum_probs=85.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||++++++|++.|++ |++++|+... ..++.+.+. .. .++.++.+|+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~---V~~~~r~~~~---~~~~~~~l~------------~~-~~~~~~~~D~~~ 65 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK---VAITARDQKE---LEEAAAELN------------NK-GNVLGLAADVRD 65 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEeeCCHHH---HHHHHHHHh------------cc-CcEEEEEccCCC
Confidence 4689999999999999999999998865 8989886421 112211111 01 468889999988
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEe
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
.. .+..++ .++|+|||+|+..... ..+...+++|+.+ ++|++|
T Consensus 66 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (237)
T PRK07326 66 EA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINIS 139 (237)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEEC
Confidence 65 333333 3789999999875321 2234456667665 599999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+... ...+..|..+|+..+.+.+.
T Consensus 140 s~~~~~~------------~~~~~~y~~sk~a~~~~~~~ 166 (237)
T PRK07326 140 SLAGTNF------------FAGGAAYNASKFGLVGFSEA 166 (237)
T ss_pred ChhhccC------------CCCCchHHHHHHHHHHHHHH
Confidence 9754321 11234566677766655543
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=107.08 Aligned_cols=132 Identities=16% Similarity=0.099 Sum_probs=87.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+++||||+|+||.+++++|+++|++ |++++|+... .+.+.+.+. ....++.++.+|+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~ 66 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWD---LALVARSQDA---LEALAAELR------------STGVKAAAYSIDLSN 66 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hCCCcEEEEEccCCC
Confidence 4578999999999999999999999875 9999986421 112211111 112478889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++ .+..++ .++|++||+||..... ..+...+.+|+.+ ++|++
T Consensus 67 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 67 PE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 65 333332 3689999999964321 2344556677765 69999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... .+ +..|..+|...+.+.+.
T Consensus 141 sS~~~~~~~---------~~---~~~Y~~sK~~~~~~~~~ 168 (241)
T PRK07454 141 SSIAARNAF---------PQ---WGAYCVSKAALAAFTKC 168 (241)
T ss_pred ccHHhCcCC---------CC---ccHHHHHHHHHHHHHHH
Confidence 998654221 11 23466667777666543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.1e-11 Score=107.90 Aligned_cols=128 Identities=17% Similarity=0.089 Sum_probs=84.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|+++|+. |+++.|+... .+.+.... ...++.++.+|+++..
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~D~~~~~ 61 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR---VGAYDINEAG---LAALAAEL--------------GAGNAWTGALDVTDRA 61 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHh--------------cCCceEEEEecCCCHH
Confidence 67999999999999999999999866 8888886421 11111110 0247889999999865
Q ss_pred CCCCHHHHHHH--------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 210 LGLSAADRAVL--------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l--------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
.+.++ ..++|+||||||..... ..++..+++|+.+ ++|++|
T Consensus 62 ------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 135 (260)
T PRK08267 62 ------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTS 135 (260)
T ss_pred ------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 33333 33679999999975321 2345567778776 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.... ..+..|..+|...+.+.+.
T Consensus 136 S~~~~~~~------------~~~~~Y~~sKaa~~~~~~~ 162 (260)
T PRK08267 136 SASAIYGQ------------PGLAVYSATKFAVRGLTEA 162 (260)
T ss_pred chhhCcCC------------CCchhhHHHHHHHHHHHHH
Confidence 97543211 1133456666666655543
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-11 Score=99.91 Aligned_cols=134 Identities=18% Similarity=0.222 Sum_probs=92.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||++.||..++++|+++|.. +|+++.|+.+ .+..+.+.+.+. ....++.++.+|+++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~--~v~~~~r~~~-~~~~~~l~~~l~------------~~~~~~~~~~~D~~~~~ 65 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGAR--VVILTSRSED-SEGAQELIQELK------------APGAKITFIECDLSDPE 65 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTE--EEEEEESSCH-HHHHHHHHHHHH------------HTTSEEEEEESETTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCce--EEEEeeeccc-cccccccccccc------------ccccccccccccccccc
Confidence 68999999999999999999999643 4888888711 111222222111 12268899999999864
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~~~~ 261 (298)
.+..++ ..+|++|||||..... ..+.+.+++|+.+ ++|++||+.+.
T Consensus 66 ------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 66 ------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV 139 (167)
T ss_dssp ------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred ------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence 333332 3689999999986521 3445667788777 89999998665
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. |...+..|..+|+.-+.+.+.+
T Consensus 140 ~------------~~~~~~~Y~askaal~~~~~~l 162 (167)
T PF00106_consen 140 R------------GSPGMSAYSASKAALRGLTQSL 162 (167)
T ss_dssp S------------SSTTBHHHHHHHHHHHHHHHHH
T ss_pred c------------CCCCChhHHHHHHHHHHHHHHH
Confidence 3 2234567888888888777654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-11 Score=108.42 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=74.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|++.|.+ |++..|+... .+.+...+. ....++.++.+|+++..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~~~~ 62 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR---LALADVNEEG---GEETLKLLR------------EAGGDGFYQRCDVRDYS 62 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEccCCCHH
Confidence 57999999999999999999999876 8888876321 111111111 11246788999998865
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeC
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVST 257 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS 257 (298)
.+..++ .++|++|||||..... ..++..+++|+.+ ++|++||
T Consensus 63 ------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 136 (270)
T PRK05650 63 ------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIAS 136 (270)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 333333 3699999999975321 2344456777655 8999999
Q ss_pred Cccc
Q psy14522 258 AYTH 261 (298)
Q Consensus 258 ~~~~ 261 (298)
..+.
T Consensus 137 ~~~~ 140 (270)
T PRK05650 137 MAGL 140 (270)
T ss_pred hhhc
Confidence 8554
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-11 Score=108.21 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=75.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||+++++.|+++|++ |++..|+.. ++.+.... ..++.++.+|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~---v~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 60 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGAR---VAIGDLDEA------LAKETAAE-------------LGLVVGGPLDVT 60 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-------------hccceEEEccCC
Confidence 35789999999999999999999999876 787777532 12111110 025778899999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
+++- .-..+.+.....++|++|||||..... ..+...+++|+.| +||++||+.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 140 (273)
T PRK07825 61 DPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAG 140 (273)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccc
Confidence 8650 000112222334689999999975321 2345567788776 6999999865
Q ss_pred c
Q psy14522 261 H 261 (298)
Q Consensus 261 ~ 261 (298)
.
T Consensus 141 ~ 141 (273)
T PRK07825 141 K 141 (273)
T ss_pred c
Confidence 4
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-11 Score=105.38 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=84.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||++++++|+++|++ |+++.|...... .+.. ..++.++.+|++++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~---V~~~~r~~~~~~---~~~~-----------------~~~~~~~~~D~~d~~ 58 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQ---VTATVRGPQQDT---ALQA-----------------LPGVHIEKLDMNDPA 58 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCE---EEEEeCCCcchH---HHHh-----------------ccccceEEcCCCCHH
Confidence 68999999999999999999999876 898998754211 1111 135677888998865
Q ss_pred CCCCHHHHHHHhc-----CccEEEEcCcccCcc---------ccHHHHhhccccc-----------------eEEEEeCC
Q psy14522 210 LGLSAADRAVLRR-----NVTVVFHGAATVRFD---------ENIKVAIAINIFG-----------------SFVHVSTA 258 (298)
Q Consensus 210 ~gl~~~~~~~l~~-----~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g-----------------~~v~iSS~ 258 (298)
.+..+.+ ++|+||||||..... ..+...+.+|+.+ .++++||.
T Consensus 59 ------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~ 132 (225)
T PRK08177 59 ------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ 132 (225)
T ss_pred ------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence 3433333 589999999875321 2233455667665 67888887
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++.... .+...+..|..+|...+.+++.+
T Consensus 133 ~g~~~~---------~~~~~~~~Y~~sK~a~~~~~~~l 161 (225)
T PRK08177 133 LGSVEL---------PDGGEMPLYKASKAALNSMTRSF 161 (225)
T ss_pred cccccc---------CCCCCccchHHHHHHHHHHHHHH
Confidence 554221 11112334777777777776643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=110.74 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=78.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~---Vvl~~R~~~---~l~~~~~~~~------------~~g~~~~~~~~Dv~ 66 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGAR---LVLAARDEE---ALQAVAEECR------------ALGAEVLVVPTDVT 66 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEeeCC
Confidence 45789999999999999999999999876 888888632 1122211111 11246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ ++..++ .++|++|||||..... ..+...+++|+.| ++|+
T Consensus 67 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~ 140 (330)
T PRK06139 67 DAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFIN 140 (330)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 865 444443 4689999999964321 3345567888877 7899
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+.+.
T Consensus 141 isS~~~~ 147 (330)
T PRK06139 141 MISLGGF 147 (330)
T ss_pred EcChhhc
Confidence 9997544
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=106.98 Aligned_cols=125 Identities=19% Similarity=0.180 Sum_probs=87.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|+++|++ |+++.|.. +. ....++.++.+|++
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~---v~~~~~~~--------~~----------------~~~~~~~~~~~D~~ 58 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAK---VIGFDQAF--------LT----------------QEDYPFATFVLDVS 58 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecch--------hh----------------hcCCceEEEEecCC
Confidence 45789999999999999999999999876 88888753 00 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..++ ..+|++||||+..... ..+...+++|+.+ +|++
T Consensus 59 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 132 (252)
T PRK08220 59 DAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT 132 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 865 444443 3589999999975321 2345566777766 6999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.. +...+..|..+|...+.+++.+
T Consensus 133 ~ss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 133 VGSNAAHV------------PRIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred ECCchhcc------------CCCCCchhHHHHHHHHHHHHHH
Confidence 99975432 1122345667777777776543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-11 Score=106.37 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=84.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+||||+|+||.++++.|+++|+. |+++.|+.... +.+...+. ....++.++.+|+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~---v~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~D~~~ 65 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK---VVIYDSNEEAA---EALAAELR------------AAGGEARVLVFDVSD 65 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChhHH---HHHHHHHH------------hcCCceEEEEccCCC
Confidence 4689999999999999999999999876 88888874321 11111111 122568889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..++ ..+|.|||+||..... ..+...++.|+.+ +||++
T Consensus 66 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ 139 (246)
T PRK05653 66 EA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNI 139 (246)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 65 333333 3579999999875431 1233445555554 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+... ...+..|..+|...+.+.+.
T Consensus 140 ss~~~~~~------------~~~~~~y~~sk~~~~~~~~~ 167 (246)
T PRK05653 140 SSVSGVTG------------NPGQTNYSAAKAGVIGFTKA 167 (246)
T ss_pred CcHHhccC------------CCCCcHhHhHHHHHHHHHHH
Confidence 98744321 11233455666666555544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.9e-11 Score=106.15 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=84.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+++||||+|+||+++++.|++.|++ |+++.|.... ..+.+.+.+. ....++.++.+|+++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~d 70 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD---VAVHYNRSRD--EAEALAAEIR------------ALGRRAVALQADLAD 70 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHH------------hcCCeEEEEEcCCCC
Confidence 5789999999999999999999999866 6666554221 1111111111 012468889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.. .+..++ ..+|+||||||.... ...+...+++|+.| +++++
T Consensus 71 ~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 144 (258)
T PRK09134 71 EA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM 144 (258)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 65 333332 358999999996432 13445667888887 56666
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|..+... .| .+..|..+|...|.+.+.+
T Consensus 145 ~s~~~~~~----------~p--~~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 145 IDQRVWNL----------NP--DFLSYTLSKAALWTATRTL 173 (258)
T ss_pred CchhhcCC----------CC--CchHHHHHHHHHHHHHHHH
Confidence 66432211 11 2345777777666665543
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.1e-11 Score=105.07 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=87.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|+.. .+.+... +...++.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~---v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGAR---VAITGRDPA------SLEAARA------------ELGESALVIRADAG 62 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence 35789999999999999999999999876 888888532 1111111 11246778899998
Q ss_pred CCCCC-CCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcccC
Q psy14522 207 LPGLG-LSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYTHC 262 (298)
Q Consensus 207 ~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~ 262 (298)
+..-- .-.+.+.+...++|++|||||..... ..+...+++|+.+ +++++||..+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~ 142 (249)
T PRK06500 63 DVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI 142 (249)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc
Confidence 76410 00011222234789999999975321 2344567788877 678888754321
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. ......|..+|...|.+++.+
T Consensus 143 ~------------~~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 143 G------------MPNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred C------------CCCccHHHHHHHHHHHHHHHH
Confidence 1 011345777788887777543
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-11 Score=108.53 Aligned_cols=134 Identities=18% Similarity=0.215 Sum_probs=88.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||++++++|++.|+. |+++.|+... ...+.+.+. ....++.++.+|++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv~ 68 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGAN---VAVASRSQEK---VDAAVAQLQ------------QAGPEGLGVSADVR 68 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------HhCCceEEEECCCC
Confidence 46789999999999999999999999876 8888886431 111111111 11245678899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~i 255 (298)
++. .+..++ .++|++||||+.... ...+...+++|+.| +|+++
T Consensus 69 ~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~i 142 (264)
T PRK07576 69 DYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQI 142 (264)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 865 344333 358999999985321 12344556777776 88999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||..+... ...+..|..+|...+.+++.+
T Consensus 143 ss~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 171 (264)
T PRK07576 143 SAPQAFVP------------MPMQAHVCAAKAGVDMLTRTL 171 (264)
T ss_pred CChhhccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 99754321 112345677777777776653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.7e-11 Score=107.06 Aligned_cols=137 Identities=12% Similarity=0.109 Sum_probs=88.1
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ +.||.+++++|++.|++ |++..|+. ...+.+.+. ...++.++.+|
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~---Vi~~~r~~---~~~~~~~~~---------------~~~~~~~~~~D 63 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGAT---VIYTYQND---RMKKSLQKL---------------VDEEDLLVECD 63 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEecCch---HHHHHHHhh---------------ccCceeEEeCC
Confidence 468999999999 79999999999999876 78777752 111111111 01357789999
Q ss_pred CCCCCC-CCCHHHHHHHhcCccEEEEcCcccCc-----------cccHHHHhhccccc----------------eEEEEe
Q psy14522 205 VSLPGL-GLSAADRAVLRRNVTVVFHGAATVRF-----------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 205 l~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
++++.- .-..+...+...++|++|||||.... ...+...+++|+.+ ++|++|
T Consensus 64 l~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~is 143 (252)
T PRK06079 64 VASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLT 143 (252)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEe
Confidence 998651 00001112223469999999996421 12355667888877 789999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+... ...|..|..+|..-+.+.+.+
T Consensus 144 s~~~~~~------------~~~~~~Y~asKaal~~l~~~l 171 (252)
T PRK06079 144 YFGSERA------------IPNYNVMGIAKAALESSVRYL 171 (252)
T ss_pred ccCcccc------------CCcchhhHHHHHHHHHHHHHH
Confidence 8754321 123556777777776666543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.3e-11 Score=105.08 Aligned_cols=126 Identities=13% Similarity=0.173 Sum_probs=84.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+++||||+|+||+++++.|+++ ++ |+++.|+... .+.+.+. ...++++.+|++++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~---V~~~~r~~~~---~~~~~~~----------------~~~~~~~~~D~~~~ 59 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HT---LLLGGRPAER---LDELAAE----------------LPGATPFPVDLTDP 59 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CC---EEEEeCCHHH---HHHHHHH----------------hccceEEecCCCCH
Confidence 478999999999999999999998 76 9999986321 1111110 13578899999986
Q ss_pred CCCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEeCCccc
Q psy14522 209 GLGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVSTAYTH 261 (298)
Q Consensus 209 ~~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iSS~~~~ 261 (298)
. .+..+++ ++|+|||+||..... ..+...+.+|+.+ +++++||..+.
T Consensus 60 ~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~ 133 (227)
T PRK08219 60 E------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGL 133 (227)
T ss_pred H------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhc
Confidence 5 5666655 599999999975321 1233344555554 79999997654
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
... . ....|..+|...+.+++.
T Consensus 134 ~~~---------~---~~~~y~~~K~a~~~~~~~ 155 (227)
T PRK08219 134 RAN---------P---GWGSYAASKFALRALADA 155 (227)
T ss_pred CcC---------C---CCchHHHHHHHHHHHHHH
Confidence 221 1 123466677776766554
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-11 Score=108.71 Aligned_cols=102 Identities=20% Similarity=0.270 Sum_probs=72.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||.++++.|++.|++ |+++.|+.. ++..... .++.++.+|+++..
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~~ 57 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYE---VWATARKAE------DVEALAA---------------AGFTAVQLDVNDGA 57 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCHH
Confidence 68999999999999999999999866 888888632 1111110 34678889998865
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEeCC
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVSTA 258 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iSS~ 258 (298)
.+..++ .++|++|||||..... ..+...+++|+.| ++|++||+
T Consensus 58 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~ 131 (274)
T PRK05693 58 ------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSV 131 (274)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCc
Confidence 343332 4689999999964321 2344566777777 68999997
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
.+.
T Consensus 132 ~~~ 134 (274)
T PRK05693 132 SGV 134 (274)
T ss_pred ccc
Confidence 654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.8e-11 Score=104.44 Aligned_cols=143 Identities=14% Similarity=0.134 Sum_probs=89.4
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccc------hhHH--HHHHHHHHHHhhhhhcCccccC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKT------VSER--LDELFEDRLFSRLKAEVPHFRS 196 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~------~~~r--l~~~~~~~~~~~l~~~~~~~~~ 196 (298)
+++++++||||+| +||.+++++|++.|++ |+++.|++.... ..+. +...+. ....
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~---vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 67 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGID---IFFTYWSPYDKTMPWGMHDKEPVLLKEEIE------------SYGV 67 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCc---EEEEcCCccccccccccchhhHHHHHHHHH------------hcCC
Confidence 3578999999995 7999999999999876 888888632110 0011 111110 1224
Q ss_pred CeEEEecCCCCCCC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------
Q psy14522 197 KISVVTGDVSLPGL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------ 250 (298)
Q Consensus 197 ~v~~v~~Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------ 250 (298)
++.++.+|+++..- .-..+.+......+|+|||+||..... ..++..+++|+.|
T Consensus 68 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 147 (256)
T PRK12748 68 RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG 147 (256)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe
Confidence 68899999998651 000011222224689999999874321 2334556778776
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||..+..+ ...+..|..+|+..+.+++.+
T Consensus 148 ~iv~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 148 RIINLTSGQSLGP------------MPDELAYAATKGAIEAFTKSL 181 (256)
T ss_pred EEEEECCccccCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 7999999754321 112346778888888876654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.3e-11 Score=106.12 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=86.7
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ +.||.+++++|++.|.+ |++..|..... +++++.... + ...++.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~---v~~~~r~~~~~---~~~~~~~~~-----~------~~~~~~~~~~D 67 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAK---LVFTYAGERLE---KEVRELADT-----L------EGQESLLLPCD 67 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEecCcccch---HHHHHHHHH-----c------CCCceEEEecC
Confidence 457999999997 89999999999999876 77777753221 223222111 0 02467889999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc--------c---ccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF--------D---ENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~--------~---~~~~~~~~~Nv~g---------------- 250 (298)
++++. .++.+ +.++|++|||||.... . ..+...+++|+.+
T Consensus 68 v~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g 141 (257)
T PRK08594 68 VTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG 141 (257)
T ss_pred CCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence 99875 33322 3468999999986421 1 1233445666655
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||+.+... ...+..|..+|...+.+.+.+
T Consensus 142 ~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 175 (257)
T PRK08594 142 SIVTLTYLGGERV------------VQNYNVMGVAKASLEASVKYL 175 (257)
T ss_pred eEEEEcccCCccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8999999865321 112345666777666665543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-11 Score=106.14 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=90.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|+++|||++|+||.++++.|++.|++ |++++|+.. ..+++.+.+.. ....++.++.+|+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~---Vi~~~r~~~---~~~~~~~~l~~-----------~~~~~~~~~~~d~ 71 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT---VILLGRTEE---KLEAVYDEIEA-----------AGGPQPAIIPLDL 71 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc---EEEEeCCHH---HHHHHHHHHHh-----------cCCCCceEEEecc
Confidence 457899999999999999999999999876 888888642 11222222111 1123567788888
Q ss_pred CCCCC---CCCHHHHHHHhcCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEEEEe
Q psy14522 206 SLPGL---GLSAADRAVLRRNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 206 ~~~~~---gl~~~~~~~l~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
...+. .-....+.....++|+|||+|+..... ..+...+++|+.| +|+++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~s 151 (247)
T PRK08945 72 LTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTS 151 (247)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 64220 000112333334789999999864321 3345567788876 789999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+.... .....|..+|+..+.+++.+
T Consensus 152 s~~~~~~~------------~~~~~Y~~sK~a~~~~~~~~ 179 (247)
T PRK08945 152 SSVGRQGR------------ANWGAYAVSKFATEGMMQVL 179 (247)
T ss_pred cHhhcCCC------------CCCcccHHHHHHHHHHHHHH
Confidence 97543211 11235777888888877654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.9e-11 Score=107.09 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=85.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++++||||+|+||.++++.|++.|++ |++++|+... .+.+.+.+. ....++.++.+|+++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~---Vi~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~~~ 62 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQ---LVLAARNETR---LASLAQELA------------DHGGEALVVPTDVSDA 62 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEccCCCH
Confidence 368999999999999999999999865 8888886321 112211111 1124688899999986
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eEEEEe
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
. .+..++ .++|+||||||..... ..+.+.+++|+.+ ++|++|
T Consensus 63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~s 136 (263)
T PRK06181 63 E------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVS 136 (263)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5 444433 3689999999975321 1133446777776 689999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+... ...+..|..+|...+.+.+.
T Consensus 137 S~~~~~~------------~~~~~~Y~~sK~~~~~~~~~ 163 (263)
T PRK06181 137 SLAGLTG------------VPTRSGYAASKHALHGFFDS 163 (263)
T ss_pred cccccCC------------CCCccHHHHHHHHHHHHHHH
Confidence 9754421 11234566777777766543
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.5e-11 Score=104.51 Aligned_cols=129 Identities=19% Similarity=0.157 Sum_probs=87.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++|||++|+||+++++.|+++|++ |+++.|+.. +..+.... .+..++.+|++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~---V~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~ 63 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGAR---VVAAARNAA------ALDRLAGE--------------TGCEPLRLDVG 63 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH--------------hCCeEEEecCC
Confidence 46789999999999999999999999876 888888632 11111110 13567889998
Q ss_pred CCCCCCCHHHHHHHh---cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVLR---RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~---~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iSS 257 (298)
+.. .+..++ ..+|+|||+|+..... ..+...+.+|+.+ +||++||
T Consensus 64 ~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 64 DDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 764 444444 3589999999975321 2344455667766 6999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+.... ..+..|..+|...|.+++.+
T Consensus 138 ~~~~~~~------------~~~~~y~~sK~a~~~~~~~~ 164 (245)
T PRK07060 138 QAALVGL------------PDHLAYCASKAALDAITRVL 164 (245)
T ss_pred HHHcCCC------------CCCcHhHHHHHHHHHHHHHH
Confidence 7543221 12345777888888776654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.7e-11 Score=106.86 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=88.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||.+++++|++.|.+ |+++.|.... ..+.+.+.+. ....++.++.+|++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~---V~l~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~ 106 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGAD---IAIVYLDEHE--DANETKQRVE------------KEGVKCLLIPGDVS 106 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcch--HHHHHHHHHH------------hcCCeEEEEEccCC
Confidence 45789999999999999999999999876 7777776421 1112222111 11246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g----------------~~v~i 255 (298)
+.. .+..++ .++|+|||||+..... ..+...+++|+.+ ++|++
T Consensus 107 ~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~i 180 (290)
T PRK06701 107 DEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINT 180 (290)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 865 333333 3689999999964211 2344567788777 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+.... .. ...|..+|+..+.+.+.+
T Consensus 181 sS~~~~~~~---------~~---~~~Y~~sK~a~~~l~~~l 209 (290)
T PRK06701 181 GSITGYEGN---------ET---LIDYSATKGAIHAFTRSL 209 (290)
T ss_pred ecccccCCC---------CC---cchhHHHHHHHHHHHHHH
Confidence 997654321 01 123666777766665543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=107.18 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=74.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|++|||||+|+||+++++.|+++|++ |+++.|+... .+++.+.+. ....++.++.+|+.++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~~ 62 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGAN---VVVNDLGEAG---AEAAAKVAT------------DAGGSVIYLVADVTKE 62 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEECCCCCH
Confidence 368999999999999999999999876 8888886421 122222111 1124688899999986
Q ss_pred CC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCccc
Q psy14522 209 GL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYTH 261 (298)
Q Consensus 209 ~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~~ 261 (298)
.- .-....+.....++|+|||+|+..... ..++..++.|+.| ++|++||..+.
T Consensus 63 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~ 141 (255)
T TIGR01963 63 DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL 141 (255)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 50 000012222345689999999975321 2234445566554 89999997543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.5e-11 Score=108.19 Aligned_cols=132 Identities=17% Similarity=0.156 Sum_probs=89.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||.++++.|++.|++ |+++.|+.. ++++.... + . ...++..+.+|++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~l~~~~~~-----l----~-~~~~~~~~~~Dv~ 67 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAK---LALVDLEEA------ELAALAAE-----L----G-GDDRVLTVVADVT 67 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h----c-CCCcEEEEEecCC
Confidence 46899999999999999999999999875 888888632 22221110 0 0 0135666779999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~i 255 (298)
+.. .+..+ ...+|++|||||.... ...+...+++|+.| +||++
T Consensus 68 d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~i 141 (296)
T PRK05872 68 DLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQV 141 (296)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 865 33333 3468999999997532 13445667888877 69999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+... ...+..|..+|...+.+.+.
T Consensus 142 sS~~~~~~------------~~~~~~Y~asKaal~~~~~~ 169 (296)
T PRK05872 142 SSLAAFAA------------APGMAAYCASKAGVEAFANA 169 (296)
T ss_pred eCHhhcCC------------CCCchHHHHHHHHHHHHHHH
Confidence 99865432 11244677777777776654
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.3e-11 Score=109.55 Aligned_cols=152 Identities=20% Similarity=0.200 Sum_probs=96.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC-CccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK-KGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.+.+++++|||||.+||.+++++|+.+|.. |+...|+. ...++.+++.. +....++.++.+|
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~---Vv~~~R~~~~~~~~~~~i~~--------------~~~~~~i~~~~lD 94 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAH---VVLACRNEERGEEAKEQIQK--------------GKANQKIRVIQLD 94 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCE---EEEEeCCHHHHHHHHHHHHh--------------cCCCCceEEEECC
Confidence 356799999999999999999999999855 99999985 22222223222 1223678899999
Q ss_pred CCCCCCC-CCHHHHHHHhcCccEEEEcCcccCcc-----ccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 205 VSLPGLG-LSAADRAVLRRNVTVVFHGAATVRFD-----ENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 205 l~~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~~-----~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
+++...- --.+.+.......|++|+|||.+... +.++..+++|..| |+|++||...
T Consensus 95 Lssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 95 LSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred CCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 9986510 00122333334689999999987432 3567778999998 9999999754
Q ss_pred cCCCCCccCcCCCC-C-CChHHHHHHHHHHHHHHHhh
Q psy14522 261 HCPRQEIDEVFYPP-P-YDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 261 ~~~~~~~~E~~~~~-p-~~~y~~yk~sK~~aE~~l~~ 295 (298)
.....+..-.... . .+.+..|+.||..-.....+
T Consensus 175 -~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~e 210 (314)
T KOG1208|consen 175 -GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANE 210 (314)
T ss_pred -cCccchhhccchhccCccchhHHHHhHHHHHHHHHH
Confidence 2111111111111 1 23344577777765544443
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.6e-11 Score=104.61 Aligned_cols=136 Identities=12% Similarity=0.120 Sum_probs=86.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC-ccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK-GKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~-~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+++||||+|+||.++++.|++.|++ |+++.+... ..+..+++.+.+.. ...++.++.+|+
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~---vv~i~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~D~ 70 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAK---AVAIHYNSAASKADAEETVAAVKA------------AGAKAVAFQADL 70 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCc---EEEEecCCccchHHHHHHHHHHHH------------hCCcEEEEecCc
Confidence 35789999999999999999999999876 555555422 22222222222211 124688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~i 255 (298)
+++. .+.+++ .++|++|||||.... ...+...+++|+.+ +++++
T Consensus 71 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~ 144 (257)
T PRK12744 71 TTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTL 144 (257)
T ss_pred CCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEE
Confidence 9865 343332 468999999997421 12355667888877 56666
Q ss_pred e-CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 S-TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 S-S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+ |..+... | .++.|..+|+..|.+.+.+
T Consensus 145 ~ss~~~~~~-----------~--~~~~Y~~sK~a~~~~~~~l 173 (257)
T PRK12744 145 VTSLLGAFT-----------P--FYSAYAGSKAPVEHFTRAA 173 (257)
T ss_pred ecchhcccC-----------C--CcccchhhHHHHHHHHHHH
Confidence 3 4322110 1 2345778888888777654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.4e-11 Score=120.81 Aligned_cols=119 Identities=17% Similarity=0.146 Sum_probs=79.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+||||||+||||++|++.|.++|++ |... .+|+++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~---v~~~---------------------------------------~~~l~d 416 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIA---YEYG---------------------------------------KGRLED 416 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCe---EEee---------------------------------------cccccc
Confidence 4578999999999999999999998766 4210 022333
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccC---c---cccHHHHhhccccc-------------eEEEEeCCcccCC---
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVR---F---DENIKVAIAINIFG-------------SFVHVSTAYTHCP--- 263 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~---~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--- 263 (298)
.. .+...+. ++|+|||+||... . ..+....+++|+.| +++++||.+++..
T Consensus 417 ~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~ 490 (668)
T PLN02260 417 RS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAK 490 (668)
T ss_pred HH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcc
Confidence 22 3333333 6899999999763 2 12445677889888 7788888644321
Q ss_pred -----CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 -----RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 -----~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..++.|+..+.|. .+.|..+|+.+|+++...
T Consensus 491 ~~~~~~~p~~E~~~~~~~--~~~Yg~sK~~~E~~~~~~ 526 (668)
T PLN02260 491 HPEGSGIGFKEEDKPNFT--GSFYSKTKAMVEELLREY 526 (668)
T ss_pred cccccCCCCCcCCCCCCC--CChhhHHHHHHHHHHHhh
Confidence 2367776544332 245788899999998753
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.3e-11 Score=104.59 Aligned_cols=111 Identities=23% Similarity=0.318 Sum_probs=75.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+++++||||+|+||.++++.|++.|++ |+++ .|.... ...+...+. ....++.++.+|+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~---v~~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~ 64 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK---VVIAYDINEEA---AQELLEEIK------------EEGGDAIAVKADV 64 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHHH------------hcCCeEEEEECCC
Confidence 35689999999999999999999999876 7766 775321 111111111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..++ .++|+|||+||..... ..++..+++|+.+ +||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (247)
T PRK05565 65 SSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV 138 (247)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 343333 2799999999975321 2334556677776 599
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||..+.
T Consensus 139 ~~sS~~~~ 146 (247)
T PRK05565 139 NISSIWGL 146 (247)
T ss_pred EECCHhhc
Confidence 99997443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.1e-11 Score=104.73 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=86.1
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ +.||.+++++|+++|.+ |++..|+... .+.+.+.... .....++.+|
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~---v~l~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~D 68 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAE---LAVTYLNDKA---RPYVEPLAEE-------------LDAPIFLPLD 68 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCChhh---HHHHHHHHHh-------------hccceEEecC
Confidence 468999999998 59999999999999876 7777776321 1122222110 0234578899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
+++++ ++..+ ..++|++|||||.... ...+...+++|+.|
T Consensus 69 ~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g 142 (258)
T PRK07533 69 VREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG 142 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence 99865 33332 3468999999996421 13456678889888
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+++++||..+.. +...|..|..+|+.-+.+.+.
T Consensus 143 ~Ii~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~ 175 (258)
T PRK07533 143 SLLTMSYYGAEK------------VVENYNLMGPVKAALESSVRY 175 (258)
T ss_pred EEEEEecccccc------------CCccchhhHHHHHHHHHHHHH
Confidence 788998864421 112345566677666555443
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.6e-11 Score=105.95 Aligned_cols=109 Identities=22% Similarity=0.312 Sum_probs=75.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|++.|++ |+++.|+... .+.+.+.+. ....++.++.+|++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~---Vi~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~~ 62 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGAN---VVITGRTKEK---LEEAKLEIE------------QFPGQVLTVQMDVRNP 62 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEecCCCH
Confidence 478999999999999999999999875 8888886421 112221111 1124788999999986
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEE
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~i 255 (298)
+ .+..+ ..++|++|||||.... ...+...+++|+.| +++++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 63 E------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred H------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 5 33333 2468999999985321 12345566777665 89999
Q ss_pred eCCccc
Q psy14522 256 STAYTH 261 (298)
Q Consensus 256 SS~~~~ 261 (298)
||+++.
T Consensus 137 sS~~~~ 142 (252)
T PRK07677 137 VATYAW 142 (252)
T ss_pred cChhhc
Confidence 998654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=8e-11 Score=104.45 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=87.7
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ +.||.+++++|++.|++ |++..|+.......+.+.+... ...++.++.+|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~---v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D 67 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAE---LGITYLPDEKGRFEKKVRELTE-------------PLNPSLFLPCD 67 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEEecCcccchHHHHHHHHHh-------------ccCcceEeecC
Confidence 357899999986 79999999999999877 6666554321111222222111 01346678899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccC-------c----cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVR-------F----DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~-------~----~~~~~~~~~~Nv~g---------------- 250 (298)
+++++ .+..+ ..++|++|||||... + ...|...+++|+.|
T Consensus 68 l~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g 141 (258)
T PRK07370 68 VQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG 141 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence 99875 33332 246899999999642 1 12445677888888
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||..+.. +...+..|..+|+.-+.+.+.+
T Consensus 142 ~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~l 175 (258)
T PRK07370 142 SIVTLTYLGGVR------------AIPNYNVMGVAKAALEASVRYL 175 (258)
T ss_pred eEEEEecccccc------------CCcccchhhHHHHHHHHHHHHH
Confidence 899999975432 1122446777777776665543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=105.39 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=76.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++|||++|+||.+++++|++.|++ |+++.|... .+..+.+. ....++.++.+|++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~---vv~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~Dl~ 67 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCD---IVGINIVEP-TETIEQVT----------------ALGRRFLSLTADLR 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEecCcch-HHHHHHHH----------------hcCCeEEEEECCCC
Confidence 46899999999999999999999999876 776666432 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+.+ .+..++ .++|++|||||..... ..+...+++|+.+ ++|
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv 141 (253)
T PRK08993 68 KID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKII 141 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 864 333333 3689999999975321 3456677888887 689
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||..+.
T Consensus 142 ~isS~~~~ 149 (253)
T PRK08993 142 NIASMLSF 149 (253)
T ss_pred EECchhhc
Confidence 99998554
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.9e-11 Score=106.74 Aligned_cols=136 Identities=20% Similarity=0.223 Sum_probs=97.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+.||||-||+-|++|++.|++.|+. |+.+.|..+.-. ..|+ .+.. .......++..+.||++|.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~---VhGi~Rrss~~n-~~ri-~L~~---------~~~~~~~~l~l~~gDLtD~ 67 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYE---VHGIKRRSSSFN-TPRI-HLYE---------DPHLNDPRLHLHYGDLTDS 67 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcE---EEEEeeccccCC-cccc-eecc---------ccccCCceeEEEeccccch
Confidence 588999999999999999999999988 999988754211 1111 1111 1112234689999999997
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCccccHH---HHhhccccc----------------eEEEEeCC--cccCCCC
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFDENIK---VAIAINIFG----------------SFVHVSTA--YTHCPRQ 265 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~---~~~~~Nv~g----------------~~v~iSS~--~~~~~~~ 265 (298)
. .+.++++ ++|-|+|+|+......+++ ...+++..| ||...||. ||.....
T Consensus 68 ~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~ 141 (345)
T COG1089 68 S------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEI 141 (345)
T ss_pred H------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccC
Confidence 6 6666666 6899999999864332221 122233333 89999996 7877778
Q ss_pred CccCcCCCCCCChHHHHHH
Q psy14522 266 EIDEVFYPPPYDYKDFMEL 284 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~ 284 (298)
|..|+.|..|.+||+..|.
T Consensus 142 pq~E~TPFyPrSPYAvAKl 160 (345)
T COG1089 142 PQKETTPFYPRSPYAVAKL 160 (345)
T ss_pred ccccCCCCCCCCHHHHHHH
Confidence 9999999999999887765
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.7e-11 Score=105.98 Aligned_cols=113 Identities=20% Similarity=0.251 Sum_probs=76.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||.++++.|+++|++ |+++.|+... .+...+.+.. . ....++.++.+|++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~--------~--~~~~~~~~~~~D~~ 69 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGAS---VAICGRDEER---LASAEARLRE--------K--FPGARLLAARCDVL 69 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHHh--------h--CCCceEEEEEecCC
Confidence 46899999999999999999999999876 8888886431 1111111110 0 00136788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..+ ..++|++|||||..... ..+...+++|+.+ ++|+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07062 70 DEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVC 143 (265)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEE
Confidence 865 33332 34689999999964311 2345556677655 8999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+.+.
T Consensus 144 isS~~~~ 150 (265)
T PRK07062 144 VNSLLAL 150 (265)
T ss_pred ecccccc
Confidence 9998654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.1e-11 Score=102.23 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=73.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+|+||+++++.|+++|+. |+++.|+.... .+.+.+. . ...+.++.+|+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~~-~--------------~~~~~~~~~D~~ 64 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGAR---VALIGRGAAPL--SQTLPGV-P--------------ADALRIGGIDLV 64 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCe---EEEEeCChHhH--HHHHHHH-h--------------hcCceEEEeecC
Confidence 45789999999999999999999999876 89999864321 1111111 0 134667789998
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. ++..++ .++|+|||+|+..... ..+.+.+.+|+.+ ++|+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (239)
T PRK12828 65 DPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVN 138 (239)
T ss_pred CHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 343333 3689999999864321 1233344555554 8999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+.+.
T Consensus 139 ~sS~~~~ 145 (239)
T PRK12828 139 IGAGAAL 145 (239)
T ss_pred ECchHhc
Confidence 9997544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-11 Score=106.14 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=87.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+... .+.+.+.+.. . ....++.++.+|++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~l~~--------~--~~~~~~~~~~~Dl~ 70 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGAD---VLIVARDADA---LAQARDELAE--------E--FPEREVHGLAADVS 70 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHh--------h--CCCCeEEEEECCCC
Confidence 46899999999999999999999999876 8888886321 1122211110 0 01246888999999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
+++- .-..+.+...+.++|+|||+||.... ...+...+.+|+.+ ++|++||..+
T Consensus 71 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~ 150 (257)
T PRK09242 71 DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG 150 (257)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECcccc
Confidence 8650 00001122223468999999996321 13345566777776 7999999865
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.... .+ ...|..+|...+.+++.
T Consensus 151 ~~~~---------~~---~~~Y~~sK~a~~~~~~~ 173 (257)
T PRK09242 151 LTHV---------RS---GAPYGMTKAALLQMTRN 173 (257)
T ss_pred CCCC---------CC---CcchHHHHHHHHHHHHH
Confidence 4321 12 22355666666666554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-11 Score=105.83 Aligned_cols=133 Identities=11% Similarity=0.105 Sum_probs=87.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|+. |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 70 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAH---VLVNGRNAAT---LEAAVAALR------------AAGGAAEALAFDIA 70 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCe---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEccCC
Confidence 46899999999999999999999999876 8888886421 111211111 11246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+++.+.+|+.+ +||+
T Consensus 71 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 144 (256)
T PRK06124 71 DEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIA 144 (256)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 333332 3679999999974321 2344566777776 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... + .+..|..+|...+.+.+.
T Consensus 145 ~ss~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~ 173 (256)
T PRK06124 145 ITSIAGQVAR----------A--GDAVYPAAKQGLTGLMRA 173 (256)
T ss_pred EeechhccCC----------C--CccHhHHHHHHHHHHHHH
Confidence 9998653221 1 123466666666665544
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-11 Score=105.28 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=74.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++++||||+|+||++++++|+++|.+ |+++.|+... .+.+...+.. . ....++.++.+|++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~~--------~--~~~~~~~~~~~D~~~~ 65 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD---LALCARRTDR---LEELKAELLA--------R--YPGIKVAVAALDVNDH 65 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHh--------h--CCCceEEEEEcCCCCH
Confidence 578999999999999999999999865 8888886421 1112111110 0 0124688899999986
Q ss_pred CC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 209 GL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 209 ~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
.- .-....+.....++|++|||||..... ..+...+++|+.+ +||++||..+
T Consensus 66 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 143 (248)
T PRK08251 66 DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA 143 (248)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 50 000011222234799999999964321 2233456677665 7999999754
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.6e-11 Score=103.40 Aligned_cols=107 Identities=17% Similarity=0.292 Sum_probs=74.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++++++||||+|+||+++++.|+++|+. |++..|... ++++... ....++.++.+|+++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~---v~~~~~~~~------~~~~~~~------------~~~~~~~~~~~D~~~ 63 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAI---VGLHGTRVE------KLEALAA------------ELGERVKIFPANLSD 63 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH------------HhCCceEEEEccCCC
Confidence 5789999999999999999999999864 776666532 1221111 011467888999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.+ .+..+ +.++|+||||||.... ...+...+++|+.+ +||++
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 137 (245)
T PRK12936 64 RD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINI 137 (245)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 65 34333 3468999999997532 13445567777776 69999
Q ss_pred eCCccc
Q psy14522 256 STAYTH 261 (298)
Q Consensus 256 SS~~~~ 261 (298)
||..+.
T Consensus 138 sS~~~~ 143 (245)
T PRK12936 138 TSVVGV 143 (245)
T ss_pred CCHHhC
Confidence 997443
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-10 Score=102.44 Aligned_cols=140 Identities=14% Similarity=0.127 Sum_probs=88.5
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCcc-----chhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGK-----TVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-----~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|+++||||+| +||.+++++|++.|.+ |++..|..... .......+... .+. ....++.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~g~~~~ 71 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGAD---IFFTYWTAYDKEMPWGVDQDEQIQLQE-----ELL----KNGVKVS 71 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEecccccccccccccHHHHHHHHH-----HHH----hcCCeEE
Confidence 4689999999995 8999999999999876 66654321100 00111111100 010 1224788
Q ss_pred EEecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc---------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------- 250 (298)
++.+|+++.+ ++.+++ ..+|++|||||..... ..++..+++|+.|
T Consensus 72 ~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 145 (256)
T PRK12859 72 SMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK 145 (256)
T ss_pred EEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 8999999865 333332 3589999999965321 2345567788877
Q ss_pred ---eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ---SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ---~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+.. +...+..|..+|+..+.+.+.+
T Consensus 146 ~~g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 146 SGGRIINMTSGQFQG------------PMVGELAYAATKGAIDALTSSL 182 (256)
T ss_pred CCeEEEEEcccccCC------------CCCCchHHHHHHHHHHHHHHHH
Confidence 899999986532 2223556777788777776543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-11 Score=103.71 Aligned_cols=126 Identities=17% Similarity=0.127 Sum_probs=86.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||.+++++|+++|++ |+++.|+.. ++++... ...++.++.+|+++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~-------------~~~~~~~~~~D~~~~~ 59 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ---VIACGRNQS------VLDELHT-------------QSANIFTLAFDVTDHP 59 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE---EEEEECCHH------HHHHHHH-------------hcCCCeEEEeeCCCHH
Confidence 67999999999999999999999876 888888632 2222111 0146788999999865
Q ss_pred CCCCHHHHHHHhc----CccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcccC
Q psy14522 210 LGLSAADRAVLRR----NVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYTHC 262 (298)
Q Consensus 210 ~gl~~~~~~~l~~----~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~ 262 (298)
.+..+++ .+|.+|||||..... ..+...+++|+.| +++++||+.+..
T Consensus 60 ------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 133 (240)
T PRK06101 60 ------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL 133 (240)
T ss_pred ------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc
Confidence 5555554 368999999864221 2344567888876 689999975432
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
. ...+..|..+|...+.+.+.
T Consensus 134 ~------------~~~~~~Y~asK~a~~~~~~~ 154 (240)
T PRK06101 134 A------------LPRAEAYGASKAAVAYFART 154 (240)
T ss_pred C------------CCCCchhhHHHHHHHHHHHH
Confidence 1 11233577888888877654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.2e-11 Score=106.11 Aligned_cols=130 Identities=15% Similarity=0.121 Sum_probs=85.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++|||++|+||.+++++|++.|.+ |+++.|+... .+.+.+.+. ....++.++.+|++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~~~~ 62 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA---VAVADLNEET---AKETAKEIN------------QAGGKAVAYKLDVSDKD 62 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEcCCCCHH
Confidence 57999999999999999999999865 8888876321 111111111 11246888999999865
Q ss_pred CCCCHHHHHHH-------hcCccEEEEcCcccCc----c---ccHHHHhhccccc-------------------eEEEEe
Q psy14522 210 LGLSAADRAVL-------RRNVTVVFHGAATVRF----D---ENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l-------~~~vd~Vih~A~~~~~----~---~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
.+..+ ...+|++||||+.... . ..++..+++|+.+ +++++|
T Consensus 63 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 63 ------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 33333 3368999999997432 1 2344566777654 789999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.... ..++.|..+|+..+.+.+.
T Consensus 137 S~~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 163 (254)
T TIGR02415 137 SIAGHEGN------------PILSAYSSTKFAVRGLTQT 163 (254)
T ss_pred chhhcCCC------------CCCcchHHHHHHHHHHHHH
Confidence 87543211 1244566777777777654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.2e-11 Score=103.16 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=76.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++|||++|+||.++++.|+++|++ |+++.|..... ...++.++.+|++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~~------------------------~~~~~~~~~~D~~ 55 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQ---VYGVDKQDKPD------------------------LSGNFHFLQLDLS 55 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCE---EEEEeCCcccc------------------------cCCcEEEEECChH
Confidence 46789999999999999999999999876 88888764311 0146788899998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccC----c----cccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVR----F----DENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~----~----~~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
++ .+...+...++|++|||||... . ...+...+++|+.| +||++||+++
T Consensus 56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 130 (235)
T PRK06550 56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS 130 (235)
T ss_pred HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence 76 2244445568999999999542 1 12345567888877 6999999865
Q ss_pred c
Q psy14522 261 H 261 (298)
Q Consensus 261 ~ 261 (298)
.
T Consensus 131 ~ 131 (235)
T PRK06550 131 F 131 (235)
T ss_pred c
Confidence 4
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.8e-11 Score=102.36 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=82.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+++||||+|+||+++++.|++.|++ |+++.|..... ....++.+|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~---v~~~~r~~~~~--------------------------~~~~~~~~D~~~ 52 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQ---VIGIARSAIDD--------------------------FPGELFACDLAD 52 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCcccc--------------------------cCceEEEeeCCC
Confidence 4689999999999999999999999866 88888875320 012467899988
Q ss_pred CCCCCCHHHHHHHhc------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 208 PGLGLSAADRAVLRR------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
.. .+..+++ ++|++|||||..... ..+...+++|+.+ ++|++|
T Consensus 53 ~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 126 (234)
T PRK07577 53 IE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNIC 126 (234)
T ss_pred HH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 65 3444333 589999999975421 2333455666665 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|....+. + ....|..+|...|.+.+.
T Consensus 127 S~~~~~~-----------~--~~~~Y~~sK~a~~~~~~~ 152 (234)
T PRK07577 127 SRAIFGA-----------L--DRTSYSAAKSALVGCTRT 152 (234)
T ss_pred cccccCC-----------C--CchHHHHHHHHHHHHHHH
Confidence 9753211 1 123567777776666554
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.5e-11 Score=103.92 Aligned_cols=138 Identities=16% Similarity=0.161 Sum_probs=85.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++++++||||+|+||++++++|+++|++ |+++.|+... .+.+.+... . .++.++.+|++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~---V~~~~r~~~~---~~~~~~~~~------------~--~~~~~~~~D~~ 68 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR---VHVCDVSEAA---LAATAARLP------------G--AKVTATVADVA 68 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHh------------c--CceEEEEccCC
Confidence 56799999999999999999999999876 8999986431 112211110 0 25688999999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCcc--------ccHHHHhhccccc-------------------eEEEEeCC
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRFD--------ENIKVAIAINIFG-------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-------------------~~v~iSS~ 258 (298)
++.- ....+.+.....++|+|||+||..... ..+...+++|+.+ +++++||.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~ 148 (264)
T PRK12829 69 DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSV 148 (264)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 8651 000112222234789999999976211 2234455566555 47777776
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++.... . .+..|..+|...|.+++.+
T Consensus 149 ~~~~~~---------~---~~~~y~~~K~a~~~~~~~l 174 (264)
T PRK12829 149 AGRLGY---------P---GRTPYAASKWAVVGLVKSL 174 (264)
T ss_pred ccccCC---------C---CCchhHHHHHHHHHHHHHH
Confidence 432111 1 1224667777777766554
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.8e-11 Score=105.46 Aligned_cols=109 Identities=12% Similarity=0.153 Sum_probs=73.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccc-cCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHF-RSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl~~ 207 (298)
+|+++||||+|+||+++++.|++.|++ |+++.|+... .+.+.+.+.. .. ..++.++.+|+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~---vi~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~D~~~ 64 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR---VAVADINSEK---AANVAQEINA-----------EYGEGMAYGFGADATS 64 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHH-----------hcCCceeEEEEccCCC
Confidence 578999999999999999999999876 8888886431 1111111110 01 1358899999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEE
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVH 254 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~ 254 (298)
.. .+..+ ...+|++||+||.... ...+...+++|+.| ++|+
T Consensus 65 ~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~ 138 (259)
T PRK12384 65 EQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQ 138 (259)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 64 33322 2468999999986431 12345556777765 7899
Q ss_pred EeCCcc
Q psy14522 255 VSTAYT 260 (298)
Q Consensus 255 iSS~~~ 260 (298)
+||..+
T Consensus 139 ~ss~~~ 144 (259)
T PRK12384 139 INSKSG 144 (259)
T ss_pred ecCccc
Confidence 988643
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.9e-11 Score=103.98 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=73.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++|+||||+|+||.+++++|+++|++ |+++.|+... .++.... -...++.+|++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~---v~~~~r~~~~------~~~~~~~--------------~~~~~~~~D~~ 61 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGAT---VVVGDIDPEA------GKAAADE--------------VGGLFVPTDVT 61 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH------HHHHHHH--------------cCCcEEEeeCC
Confidence 56899999999999999999999999876 8888886321 1111110 01256788998
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc---------ccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD---------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g------------------~~ 252 (298)
++. .+..++ .++|++||+||..... ..+...+++|+.| ++
T Consensus 62 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~i 135 (255)
T PRK06057 62 DED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSI 135 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEE
Confidence 865 444433 3689999999965321 2245567778776 78
Q ss_pred EEEeCCcc
Q psy14522 253 VHVSTAYT 260 (298)
Q Consensus 253 v~iSS~~~ 260 (298)
|++||..+
T Consensus 136 v~~sS~~~ 143 (255)
T PRK06057 136 INTASFVA 143 (255)
T ss_pred EEEcchhh
Confidence 99998643
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.3e-11 Score=106.00 Aligned_cols=132 Identities=13% Similarity=0.152 Sum_probs=84.7
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|++|||||++ +||+++++.|++.|++ |++..|+.. ..+++.+.... . ....++.+|
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~---V~~~~r~~~---~~~~~~~~~~~------------~-g~~~~~~~D 65 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAE---LAFTYQGEA---LGKRVKPLAES------------L-GSDFVLPCD 65 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE---EEEecCchH---HHHHHHHHHHh------------c-CCceEEeCC
Confidence 4679999999997 9999999999999876 777777531 11222222110 0 123468899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
+++++ .+..+ +.++|++|||||.... ...|...+++|+.+
T Consensus 66 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G 139 (271)
T PRK06505 66 VEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG 139 (271)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc
Confidence 99865 33333 3468999999996421 13455567788776
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||..+... ...|..|..+|+.-+.+.+.
T Consensus 140 ~Iv~isS~~~~~~------------~~~~~~Y~asKaAl~~l~r~ 172 (271)
T PRK06505 140 SMLTLTYGGSTRV------------MPNYNVMGVAKAALEASVRY 172 (271)
T ss_pred eEEEEcCCCcccc------------CCccchhhhhHHHHHHHHHH
Confidence 7899998754321 11244566666665555543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-11 Score=104.41 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=85.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+... .+.+...+. ....++.++.+|++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~---Vi~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 68 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAK---VVLASRRVER---LKELRAEIE------------AEGGAAHVVSLDVT 68 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEecCC
Confidence 46799999999999999999999999865 8888886321 111211111 11246788999998
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc----------------------
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG---------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g---------------------- 250 (298)
+.+ .+..++ .++|++||||+..... ..+...+++|+.+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (258)
T PRK06949 69 DYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNT 142 (258)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCC
Confidence 864 344433 3689999999964211 2344455566543
Q ss_pred ----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||..+... ...+..|..+|...+.+++.
T Consensus 143 ~~~g~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 179 (258)
T PRK06949 143 KPGGRIINIASVAGLRV------------LPQIGLYCMSKAAVVHMTRA 179 (258)
T ss_pred CCCeEEEEECcccccCC------------CCCccHHHHHHHHHHHHHHH
Confidence 6788888754321 11233456666666666554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-10 Score=103.63 Aligned_cols=111 Identities=20% Similarity=0.306 Sum_probs=73.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||.++++.|++.|.. |++..|+.. .....+.+.+. ....++.++.+|++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~---vvi~~~~~~--~~~~~~~~~l~------------~~~~~~~~~~~Dl~ 67 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAK---VVINYRSDE--EEANDVAEEIK------------KAGGEAIAVKGDVT 67 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------HcCCeEEEEEecCC
Confidence 46899999999999999999999999865 666666432 11111211111 11246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+.. .+..++ .++|++|||||..... ..+...+++|+.+ ++|
T Consensus 68 ~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv 141 (261)
T PRK08936 68 VES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNII 141 (261)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 333332 3689999999974321 2344456677654 789
Q ss_pred EEeCCcc
Q psy14522 254 HVSTAYT 260 (298)
Q Consensus 254 ~iSS~~~ 260 (298)
++||+.+
T Consensus 142 ~~sS~~~ 148 (261)
T PRK08936 142 NMSSVHE 148 (261)
T ss_pred EEccccc
Confidence 9999754
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.5e-11 Score=102.37 Aligned_cols=132 Identities=13% Similarity=0.071 Sum_probs=85.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+++|||++|+||+++++.|++.|+. |+++.|+.. .....+..... ....++.++.+|+++.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~---vi~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~~~ 64 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYR---VIATYFSGN--DCAKDWFEEYG------------FTEDQVRLKELDVTDT 64 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCcH--HHHHHHHHHhh------------ccCCeEEEEEcCCCCH
Confidence 368999999999999999999999865 888888743 11111111100 1124688999999986
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEe
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
. .+..+ ...+|++||+||.... ...+...+++|+.+ +||++|
T Consensus 65 ~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 138 (245)
T PRK12824 65 E------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINIS 138 (245)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEC
Confidence 5 33333 2368999999996531 12344556677766 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.... + ....|..+|...+.+++.
T Consensus 139 s~~~~~~~----------~--~~~~Y~~sK~a~~~~~~~ 165 (245)
T PRK12824 139 SVNGLKGQ----------F--GQTNYSAAKAGMIGFTKA 165 (245)
T ss_pred ChhhccCC----------C--CChHHHHHHHHHHHHHHH
Confidence 97554221 1 123466777766665554
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-11 Score=118.15 Aligned_cols=133 Identities=19% Similarity=0.143 Sum_probs=90.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||++++++|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv~ 374 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAE---VVASDIDEAA---AERTAELIR------------AAGAVAHAYRVDVS 374 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEcCCC
Confidence 46789999999999999999999999876 8888886421 122222111 11246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ ..+|++|||||..... ..+...+++|+.| +||
T Consensus 375 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv 448 (582)
T PRK05855 375 DAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIV 448 (582)
T ss_pred CHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 875 343333 3589999999975321 3445567788776 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... . ....|..+|+..+.+.+.
T Consensus 449 ~~sS~~~~~~~---------~---~~~~Y~~sKaa~~~~~~~ 478 (582)
T PRK05855 449 NVASAAAYAPS---------R---SLPAYATSKAAVLMLSEC 478 (582)
T ss_pred EECChhhccCC---------C---CCcHHHHHHHHHHHHHHH
Confidence 99998664321 1 234566677766665543
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.5e-10 Score=104.26 Aligned_cols=112 Identities=14% Similarity=0.103 Sum_probs=67.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc---cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG---KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~---~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
+.+|+++||||+++||+++++.|++.|.+ |+++.|.... ....+++.+.... +. ....++.++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~---vii~~~~~~~~~~~~~~~~~~~~~~~-----l~----~~~~~~~~~~~ 71 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSASGGSAAQAVVDE-----IV----AAGGEAVANGD 71 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeeCCccccccccchhHHHHHHHH-----HH----hcCCceEEEeC
Confidence 46899999999999999999999999876 7766664310 0001122211110 00 11246778899
Q ss_pred CCCCCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc
Q psy14522 204 DVSLPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG 250 (298)
Q Consensus 204 Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g 250 (298)
|+++.+- .-..+...+...++|++|||||.... ...+...+++|+.|
T Consensus 72 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g 126 (286)
T PRK07791 72 DIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKG 126 (286)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHH
Confidence 9998650 00001112223578999999997431 13455567777765
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.4e-11 Score=105.56 Aligned_cols=134 Identities=10% Similarity=0.136 Sum_probs=87.6
Q ss_pred hhcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 126 FYRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 126 ~~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
.+.+|+++||||+ +.||.++++.|+++|++ |++..|... ..+++++.... . ....++.+
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~---V~l~~r~~~---~~~~~~~l~~~------------~-~~~~~~~~ 67 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAE---LAFTYQGDA---LKKRVEPLAAE------------L-GAFVAGHC 67 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCchH---HHHHHHHHHHh------------c-CCceEEec
Confidence 4568999999997 89999999999999876 776666421 12233322111 0 23456889
Q ss_pred CCCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----------cccHHHHhhccccc---------------
Q psy14522 204 DVSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g--------------- 250 (298)
|++++. .++.+ ...+|++|||||.... ...+...+++|+.+
T Consensus 68 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 141 (272)
T PRK08159 68 DVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG 141 (272)
T ss_pred CCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999865 33333 2468999999996531 12456677888877
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||+.+.. +...|..|..+|+.-+.+.+.+
T Consensus 142 g~Iv~iss~~~~~------------~~p~~~~Y~asKaal~~l~~~l 176 (272)
T PRK08159 142 GSILTLTYYGAEK------------VMPHYNVMGVAKAALEASVKYL 176 (272)
T ss_pred ceEEEEecccccc------------CCCcchhhhhHHHHHHHHHHHH
Confidence 788998864321 1123556777777766665543
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=104.17 Aligned_cols=132 Identities=15% Similarity=0.174 Sum_probs=84.6
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|+++||||++ .||+++++.|+++|++ |++..|+.. ..+.+++... . .....++.+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~---vil~~r~~~---~~~~~~~~~~------------~-~~~~~~~~~D 64 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAA------------Q-LGSDIVLPCD 64 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE---EEEEecchh---HHHHHHHHHh------------c-cCCceEeecC
Confidence 5689999999985 9999999999999876 766666521 1112221111 0 1345678899
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc------------cccHHHHhhccccc---------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF------------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g--------------- 250 (298)
+++++ .++.++ .++|++|||||.... ...|...+++|+.|
T Consensus 65 l~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 138 (262)
T PRK07984 65 VAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 138 (262)
T ss_pred CCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence 99865 343332 468999999996421 12344556778776
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+.. +...+..|..+|..-+.+.+.
T Consensus 139 g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~ 172 (262)
T PRK07984 139 SALLTLSYLGAER------------AIPNYNVMGLAKASLEANVRY 172 (262)
T ss_pred cEEEEEecCCCCC------------CCCCcchhHHHHHHHHHHHHH
Confidence 789999875421 111234566677766666554
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.9e-11 Score=102.27 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=86.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++++++||||+|+||.++++.|+++|++ |+++.|+... .+.+.+.+.. .....+.++.+|++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~D~~ 66 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGAT---VILVARHQKK---LEKVYDAIVE-----------AGHPEPFAIRFDLM 66 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCE---EEEEeCChHH---HHHHHHHHHH-----------cCCCCcceEEeeec
Confidence 46789999999999999999999999876 8888887431 1111111110 01134567788887
Q ss_pred CCCC-CC--CHHHHHHHh-cCccEEEEcCcccCc----c----ccHHHHhhccccc------------------eEEEEe
Q psy14522 207 LPGL-GL--SAADRAVLR-RNVTVVFHGAATVRF----D----ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 207 ~~~~-gl--~~~~~~~l~-~~vd~Vih~A~~~~~----~----~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+... .+ ....+.... ..+|+||||||.... . ..+...+++|+.| +++++|
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 146 (239)
T PRK08703 67 SAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVG 146 (239)
T ss_pred ccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5320 00 011122222 468999999996321 1 2334456788877 889998
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|..+.. |......|..+|+..+.+++.
T Consensus 147 s~~~~~------------~~~~~~~Y~~sKaa~~~~~~~ 173 (239)
T PRK08703 147 ESHGET------------PKAYWGGFGASKAALNYLCKV 173 (239)
T ss_pred cccccc------------CCCCccchHHhHHHHHHHHHH
Confidence 865432 111234577777777777654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2e-10 Score=101.65 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=81.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|+++|++ |+++.|+... .+...+.+. . ..++.++.+|+++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~-~~~~~~~~~Dv~d~~ 61 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGAR---VVISSRNEEN---LEKALKELK------------E-YGEVYAVKADLSDKD 61 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------h-cCCceEEEcCCCCHH
Confidence 57999999999999999999999876 8888886321 111111111 0 135778999999865
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccCc------c---ccHHHHhhccccc-------------------eEEE
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVRF------D---ENIKVAIAINIFG-------------------SFVH 254 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~~------~---~~~~~~~~~Nv~g-------------------~~v~ 254 (298)
.+.+++ .++|++|||||.... . ..+...+.+|+.+ +||+
T Consensus 62 ------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~ 135 (259)
T PRK08340 62 ------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY 135 (259)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 333333 469999999996421 1 1222334445433 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+... ...+..|..+|+..+.+.+.
T Consensus 136 isS~~~~~~------------~~~~~~y~~sKaa~~~~~~~ 164 (259)
T PRK08340 136 LSSVSVKEP------------MPPLVLADVTRAGLVQLAKG 164 (259)
T ss_pred EeCcccCCC------------CCCchHHHHHHHHHHHHHHH
Confidence 999865321 11233566667766666554
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=101.39 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=84.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|+... ..+.+ .. .++.++.+|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~----~~--------------~~~~~~~~D~~~~ 58 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP---VIVSYRTHYP--AIDGL----RQ--------------AGAQCIQADFSTN 58 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchh--HHHHH----HH--------------cCCEEEEcCCCCH
Confidence 578999999999999999999999876 8888886431 11111 10 2367889999986
Q ss_pred CC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc--------------------eEEEEeCCcc
Q psy14522 209 GL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG--------------------SFVHVSTAYT 260 (298)
Q Consensus 209 ~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------------~~v~iSS~~~ 260 (298)
+- .-..........++|++|||||.... ...++..+++|+.+ ++|++||..+
T Consensus 59 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~ 138 (236)
T PRK06483 59 AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV 138 (236)
T ss_pred HHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh
Confidence 51 00001112223458999999996421 13455567777776 5788887643
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. +...+..|..+|..-+.+.+..
T Consensus 139 ~~------------~~~~~~~Y~asKaal~~l~~~~ 162 (236)
T PRK06483 139 EK------------GSDKHIAYAASKAALDNMTLSF 162 (236)
T ss_pred cc------------CCCCCccHHHHHHHHHHHHHHH
Confidence 21 1112346777778777776643
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=105.04 Aligned_cols=134 Identities=17% Similarity=0.110 Sum_probs=85.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|.+ |++..|.... ..+.+.+.+. ....++.++.+|++
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~---Vv~~~~~~~~--~~~~~~~~i~------------~~g~~~~~~~~Dv~ 72 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGAT---VVVNDVASAL--DASDVLDEIR------------AAGAKAVAVAGDIS 72 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCchh--HHHHHHHHHH------------hcCCeEEEEeCCCC
Confidence 56899999999999999999999999876 7777764321 1112211111 11246888999999
Q ss_pred CCCCCCCHHHHHHH------hcCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------------
Q psy14522 207 LPGLGLSAADRAVL------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------------- 250 (298)
+++ .+..+ ..++|++|||||..... ..+...+++|+.|
T Consensus 73 d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~ 146 (306)
T PRK07792 73 QRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPV 146 (306)
T ss_pred CHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCC
Confidence 865 33333 35799999999975321 2344455666544
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||..+.... + ....|..+|...+.+.+.
T Consensus 147 ~g~iv~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~ 181 (306)
T PRK07792 147 YGRIVNTSSEAGLVGP----------V--GQANYGAAKAGITALTLS 181 (306)
T ss_pred CcEEEEECCcccccCC----------C--CCchHHHHHHHHHHHHHH
Confidence 57888887543211 1 122466677766666543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.6e-11 Score=114.38 Aligned_cols=132 Identities=13% Similarity=0.139 Sum_probs=90.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...+|+++||||+|+||.++++.|+++|++ |+++.|+.. ++++... ....++..+.+|+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~ 324 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDR---LLIIDRDAE------GAKKLAE------------ALGDEHLSVQADI 324 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceeEEEccC
Confidence 346899999999999999999999999876 888888632 2222111 0114567789999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVH 254 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~ 254 (298)
+++. .+..++ ..+|++|||||.... ...+...+++|+.| +||+
T Consensus 325 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~ 398 (520)
T PRK06484 325 TDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN 398 (520)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence 9875 333332 468999999997521 12456678889887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... ..+..|..+|+..+.+.+.+
T Consensus 399 isS~~~~~~~------------~~~~~Y~asKaal~~l~~~l 428 (520)
T PRK06484 399 LGSIASLLAL------------PPRNAYCASKAAVTMLSRSL 428 (520)
T ss_pred ECchhhcCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 9998654321 12345667777777666543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.3e-11 Score=104.08 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=75.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
..+++|+||||+|+||.+++++|+++| ++ |+++.|+.+. ..+.+.+.+.. ....+++++.+|+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~---V~~~~r~~~~--~~~~~~~~l~~-----------~~~~~v~~~~~D~ 69 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPAR---VVLAALPDDP--RRDAAVAQMKA-----------AGASSVEVIDFDA 69 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCe---EEEEeCCcch--hHHHHHHHHHh-----------cCCCceEEEEecC
Confidence 357899999999999999999999985 55 8888887542 01111111110 0113688999999
Q ss_pred CCCCCCCCHHHHHHHh--cCccEEEEcCcccCcc----ccH---HHHhhccccc------------------eEEEEeCC
Q psy14522 206 SLPGLGLSAADRAVLR--RNVTVVFHGAATVRFD----ENI---KVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~----~~~---~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
++..- -...++.+. .++|++|||+|..... ... .+.+++|+.+ +|+++||.
T Consensus 70 ~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~ 147 (253)
T PRK07904 70 LDTDS--HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSV 147 (253)
T ss_pred CChHH--HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEech
Confidence 98651 001122222 3799999999875321 111 2346777776 89999998
Q ss_pred cc
Q psy14522 259 YT 260 (298)
Q Consensus 259 ~~ 260 (298)
.+
T Consensus 148 ~g 149 (253)
T PRK07904 148 AG 149 (253)
T ss_pred hh
Confidence 65
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-10 Score=104.40 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=75.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+++++||||+++||.++++.|+++| ++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~---V~l~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~ 63 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWH---VIMACRDFLK---AEQAAKSLG------------MPKDSYTIMHLDLG 63 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCE---EEEEeCCHHH---HHHHHHHhc------------CCCCeEEEEEcCCC
Confidence 36899999999999999999999998 65 8888886321 111111110 11246778899999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCc--------cccHHHHhhccccc--------------------eEEEEeC
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRF--------DENIKVAIAINIFG--------------------SFVHVST 257 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g--------------------~~v~iSS 257 (298)
+..- .-..+.+.....++|++|||||.... ...+...+++|+.| +||++||
T Consensus 64 ~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS 143 (314)
T TIGR01289 64 SLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS 143 (314)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 8650 00011111223469999999996421 12345567888866 7999999
Q ss_pred Cccc
Q psy14522 258 AYTH 261 (298)
Q Consensus 258 ~~~~ 261 (298)
+.+.
T Consensus 144 ~~~~ 147 (314)
T TIGR01289 144 ITGN 147 (314)
T ss_pred Cccc
Confidence 8553
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=102.55 Aligned_cols=129 Identities=18% Similarity=0.219 Sum_probs=85.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|+++|++ |+++.|... +++.+... ....+++++.+|+++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~---V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~~~ 61 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH---VISISRTEN-----KELTKLAE------------QYNSNLTFHSLDLQDVH 61 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE---EEEEeCCch-----HHHHHHHh------------ccCCceEEEEecCCCHH
Confidence 58999999999999999999999876 888888642 12222111 11257888999999875
Q ss_pred CCCCHHHHHHHhcC---------c--cEEEEcCcccCcc--------ccHHHHhhccccc-------------------e
Q psy14522 210 LGLSAADRAVLRRN---------V--TVVFHGAATVRFD--------ENIKVAIAINIFG-------------------S 251 (298)
Q Consensus 210 ~gl~~~~~~~l~~~---------v--d~Vih~A~~~~~~--------~~~~~~~~~Nv~g-------------------~ 251 (298)
.+..+++. . .++|||||..... ..+...+++|+.+ +
T Consensus 62 ------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 135 (251)
T PRK06924 62 ------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKR 135 (251)
T ss_pred ------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCce
Confidence 44444331 1 2799999874321 2344456677665 6
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||..+.. +...+..|..+|...+.+.+.+
T Consensus 136 iv~~sS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~l 168 (251)
T PRK06924 136 VINISSGAAKN------------PYFGWSAYCSSKAGLDMFTQTV 168 (251)
T ss_pred EEEecchhhcC------------CCCCcHHHhHHHHHHHHHHHHH
Confidence 89999975421 2223556777888777776543
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.9e-10 Score=101.97 Aligned_cols=109 Identities=24% Similarity=0.411 Sum_probs=76.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++++++||||+|+||.+++++|+++|++ |++++|+.. ++.+.... + ....++.++.+|+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~D~~d 64 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR---LLLVGRNAE------KLEALAAR-----L-----PYPGRHRWVVADLTS 64 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----H-----hcCCceEEEEccCCC
Confidence 5789999999999999999999999876 888888632 12111110 0 012478899999998
Q ss_pred CCCCCCHHHHHHH------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 208 PGLGLSAADRAVL------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+. .+..+ ...+|++||+||..... ..+...+++|+.| +++++|
T Consensus 65 ~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~is 138 (263)
T PRK09072 65 EA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVG 138 (263)
T ss_pred HH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 65 33333 24689999999975421 2334566788777 689998
Q ss_pred CCccc
Q psy14522 257 TAYTH 261 (298)
Q Consensus 257 S~~~~ 261 (298)
|+++.
T Consensus 139 S~~~~ 143 (263)
T PRK09072 139 STFGS 143 (263)
T ss_pred ChhhC
Confidence 87543
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-10 Score=99.93 Aligned_cols=109 Identities=21% Similarity=0.227 Sum_probs=72.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|++|||||+|+||+++++.|++.|+. |+++.|... ...+.+..... ....++.++.+|++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~ 63 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR---VAANCGPNE--ERAEAWLQEQG------------ALGFDFRVVEGDVSSFE 63 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hhCCceEEEEecCCCHH
Confidence 57999999999999999999999876 777777321 11111111111 01247889999999865
Q ss_pred CCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeC
Q psy14522 210 LGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVST 257 (298)
Q Consensus 210 ~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS 257 (298)
.+..+ ...+|+||||||.... ...+...+++|+.+ +++++||
T Consensus 64 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss 137 (242)
T TIGR01829 64 ------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS 137 (242)
T ss_pred ------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 33332 3468999999986431 12334455666665 7999999
Q ss_pred Cccc
Q psy14522 258 AYTH 261 (298)
Q Consensus 258 ~~~~ 261 (298)
.++.
T Consensus 138 ~~~~ 141 (242)
T TIGR01829 138 VNGQ 141 (242)
T ss_pred hhhc
Confidence 7543
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.2e-11 Score=107.49 Aligned_cols=141 Identities=17% Similarity=0.167 Sum_probs=86.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++++||||+|+||.+++++|+++|.+ |+++.|+... .+.+.+.+.. .. ...++..+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~---Vil~~R~~~~---l~~~~~~l~~--------~~--~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN---LVLVARNPDK---LKDVSDSIQS--------KY--SKTQIKTVVVDFSG 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC---EEEEECCHHH---HHHHHHHHHH--------HC--CCcEEEEEEEECCC
Confidence 4789999999999999999999999877 8888886421 1222221111 00 01356778889974
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCcccCc-----c----ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 208 PGLGLSAADRAVLRRN--VTVVFHGAATVRF-----D----ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~-----~----~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
. ..-..+.+.+...+ +|++|||||.... . ..+...+++|+.| ++|++||.
T Consensus 116 ~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~ 194 (320)
T PLN02780 116 D-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSG 194 (320)
T ss_pred C-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEech
Confidence 2 10011223333343 5699999997421 1 2344577889887 89999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+.... ..| .++.|..+|...+.+.+.
T Consensus 195 a~~~~~--------~~p--~~~~Y~aSKaal~~~~~~ 221 (320)
T PLN02780 195 AAIVIP--------SDP--LYAVYAATKAYIDQFSRC 221 (320)
T ss_pred hhccCC--------CCc--cchHHHHHHHHHHHHHHH
Confidence 653210 011 245566777766665543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=104.36 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=75.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++|||+ |+||+++++.|. .|.+ |+++.|+... .+.+.+.+. ....++.++.+|++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~---Vv~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dv~d~ 61 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKK---VLLADYNEEN---LEAAAKTLR------------EAGFDVSTQEVDVSSR 61 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEeecCCH
Confidence 578999998 799999999996 6765 8888886321 111111111 1124678899999986
Q ss_pred CCCCCHHHHHHHh------cCccEEEEcCcccCccccHHHHhhccccc----------------eEEEEeCCccc
Q psy14522 209 GLGLSAADRAVLR------RNVTVVFHGAATVRFDENIKVAIAINIFG----------------SFVHVSTAYTH 261 (298)
Q Consensus 209 ~~gl~~~~~~~l~------~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g----------------~~v~iSS~~~~ 261 (298)
+ .+..++ .++|++|||||.......+...+++|+.| ++|++||+.+.
T Consensus 62 ~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~ 130 (275)
T PRK06940 62 E------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGH 130 (275)
T ss_pred H------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccc
Confidence 5 333332 46999999999765556778888999888 67888887543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=103.57 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=82.6
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|+++|||| +++||+++++.|+++|.+ |++..|... ..+.+++... . ......+.+|
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---v~~~~~~~~---~~~~~~~~~~------------~-~~~~~~~~~D 64 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAE---LAFTYVVDK---LEERVRKMAA------------E-LDSELVFRCD 64 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCcHH---HHHHHHHHHh------------c-cCCceEEECC
Confidence 56899999997 679999999999999876 776666421 1122222211 0 0234578899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc--------c----ccHHHHhhccccc---------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF--------D----ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~--------~----~~~~~~~~~Nv~g--------------- 250 (298)
+++++ +++.+ ..++|++|||||.... . ..+...+++|+.+
T Consensus 65 v~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~ 138 (261)
T PRK08690 65 VASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR 138 (261)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc
Confidence 99875 34333 3469999999997531 1 1234456778766
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++|++||..+... ...|..|..+|+.-+.+.+
T Consensus 139 ~g~Iv~iss~~~~~~------------~~~~~~Y~asKaal~~l~~ 172 (261)
T PRK08690 139 NSAIVALSYLGAVRA------------IPNYNVMGMAKASLEAGIR 172 (261)
T ss_pred CcEEEEEcccccccC------------CCCcccchhHHHHHHHHHH
Confidence 7889988754321 1123456666666555544
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=103.18 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=87.1
Q ss_pred hhcCceeeecCCCC-CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 126 FYRGASVFVTGGTG-FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 126 ~~~~k~vLVTGatG-~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.+.+++++||||+| .||+++++.|+++|++ |++..|.... .+...+.+... + ...++.++.+|
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~---V~~~~~~~~~---~~~~~~~~~~~----~------~~~~~~~~~~D 77 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR---VVISDIHERR---LGETADELAAE----L------GLGRVEAVVCD 77 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHHh----c------CCceEEEEEcc
Confidence 35679999999997 7999999999999876 7877775321 11111111100 0 01367889999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------e
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------S 251 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~ 251 (298)
+++++ .+..++ ..+|++|||||.... ...+...+++|+.+ +
T Consensus 78 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ 151 (262)
T PRK07831 78 VTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGV 151 (262)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 99865 344333 468999999996421 12344456667666 6
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++++||+.+... ...+..|..+|+.-+.+.+.+
T Consensus 152 iv~~ss~~~~~~------------~~~~~~Y~~sKaal~~~~~~l 184 (262)
T PRK07831 152 IVNNASVLGWRA------------QHGQAHYAAAKAGVMALTRCS 184 (262)
T ss_pred EEEeCchhhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 788888754321 112345677778777776643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.4e-10 Score=100.25 Aligned_cols=133 Identities=16% Similarity=0.132 Sum_probs=82.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+++||||+|+||.++++.|++.|++ |+++.+... ...+.+...+. ....++.++.+|++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~---v~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 64 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWS---VGINYARDA--AAAEETADAVR------------AAGGRACVVAGDVANE 64 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hcCCcEEEEEeccCCH
Confidence 468999999999999999999999876 555443321 11111111111 1124788999999986
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc---------------------eE
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG---------------------SF 252 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g---------------------~~ 252 (298)
. .+..+ ...+|++|||||..... ..+...+++|+.+ +|
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~i 138 (248)
T PRK06947 65 A------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAI 138 (248)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 5 33332 24699999999964211 2334456777776 29
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+.... + ..+..|..+|+..+.+.+.
T Consensus 139 i~~sS~~~~~~~----------~-~~~~~Y~~sK~~~~~~~~~ 170 (248)
T PRK06947 139 VNVSSIASRLGS----------P-NEYVDYAGSKGAVDTLTLG 170 (248)
T ss_pred EEECchhhcCCC----------C-CCCcccHhhHHHHHHHHHH
Confidence 999997543211 0 0123466677776666554
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-10 Score=101.70 Aligned_cols=129 Identities=16% Similarity=0.145 Sum_probs=83.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++++||||+|+||.++++.|+++|++ |++++|+... .+.+.+.+ ...++.++.+|+.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~---v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~D~~~~ 61 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR---VLALDIDAAA---LAAFADAL--------------GDARFVPVACDLTDA 61 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHh--------------cCCceEEEEecCCCH
Confidence 578999999999999999999999866 8888886421 11111111 014688899999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+ .+..++ .++|+|||+||..... ..+...+.+|+.+ +|+++|
T Consensus 62 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (257)
T PRK07074 62 A------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIG 135 (257)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 5 444333 3589999999964321 1223345566665 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+.... . ...|..+|+..+.+++.+
T Consensus 136 S~~~~~~~----------~---~~~y~~sK~a~~~~~~~~ 162 (257)
T PRK07074 136 SVNGMAAL----------G---HPAYSAAKAGLIHYTKLL 162 (257)
T ss_pred chhhcCCC----------C---CcccHHHHHHHHHHHHHH
Confidence 97543211 0 114566677777666543
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-10 Score=101.73 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=90.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++|||++|+||.++++.|++.|.+ |+++.|.... .+.+.+.+.. ....++.++.+|++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~D~~ 67 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCH---LHLVARDADA---LEALAADLRA-----------AHGVDVAVHALDLS 67 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHh-----------hcCCceEEEEecCC
Confidence 35799999999999999999999999865 8888886421 1122111110 11246788999999
Q ss_pred CCCCCCCHHHHHHH---hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVL---RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l---~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
++. .+..+ ...+|++|||||.... ...+...+++|+.+ ++|++||.
T Consensus 68 ~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 141 (259)
T PRK06125 68 SPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGA 141 (259)
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCc
Confidence 865 44433 3469999999996421 13455667888887 68999887
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+.. |...|..|..+|..-+.+.+.
T Consensus 142 ~~~~------------~~~~~~~y~ask~al~~~~~~ 166 (259)
T PRK06125 142 AGEN------------PDADYICGSAGNAALMAFTRA 166 (259)
T ss_pred cccC------------CCCCchHhHHHHHHHHHHHHH
Confidence 4421 222356677777776666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-10 Score=102.04 Aligned_cols=132 Identities=15% Similarity=0.164 Sum_probs=84.1
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++|||| ++.||.++++.|++.|++ |++..|.... .+++.+.... . ....++.+|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~---~~~~~~~~~~------------~-~~~~~~~~D 64 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRF---KDRITEFAAE------------F-GSDLVFPCD 64 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe---EEEEccchHH---HHHHHHHHHh------------c-CCcceeecc
Confidence 46799999996 679999999999999877 7766554211 1222222110 0 123467899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc------------cccHHHHhhccccc---------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF------------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g--------------- 250 (298)
+++++ .+..+ +.++|++|||||.... ...|...+++|+.|
T Consensus 65 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~ 138 (260)
T PRK06997 65 VASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD 138 (260)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 99875 33333 3469999999997421 12445567888887
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+... ...+..|..+|+.-+.+.+.
T Consensus 139 g~Ii~iss~~~~~~------------~~~~~~Y~asKaal~~l~~~ 172 (260)
T PRK06997 139 ASLLTLSYLGAERV------------VPNYNTMGLAKASLEASVRY 172 (260)
T ss_pred ceEEEEeccccccC------------CCCcchHHHHHHHHHHHHHH
Confidence 7999998754311 11233466667666655543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.3e-11 Score=117.26 Aligned_cols=134 Identities=17% Similarity=0.138 Sum_probs=90.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||.++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv~ 430 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGAT---VFLVARNGEA---LDELVAEIR------------AKGGTAHAYTCDLT 430 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH------------hcCCcEEEEEecCC
Confidence 45789999999999999999999999876 8888886421 111111111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc---------cccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF---------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g------------------~~ 252 (298)
+.. .+..++ .++|++|||||.... ...+...+++|+.| +|
T Consensus 431 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 504 (657)
T PRK07201 431 DSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHV 504 (657)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEE
Confidence 865 444433 368999999996421 12345567778776 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+.... ..++.|..+|+..+.+.+.+
T Consensus 505 v~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 536 (657)
T PRK07201 505 VNVSSIGVQTNA------------PRFSAYVASKAALDAFSDVA 536 (657)
T ss_pred EEECChhhcCCC------------CCcchHHHHHHHHHHHHHHH
Confidence 999998654321 12345777888877776543
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.8e-10 Score=99.74 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=83.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++++||||+|+||++++++|++.|+. |++..+... ...+.+...+. ....++.++.+|+++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~---vv~~~~~~~--~~~~~~~~~l~------------~~~~~~~~~~~Dl~~~ 64 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA---VCLNYLRNR--DAAEAVVQAIR------------RQGGEALAVAADVADE 64 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe---EEEecCCCH--HHHHHHHHHHH------------hCCCcEEEEEeccCCH
Confidence 478999999999999999999999866 555543321 11111111111 1124677899999986
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc---------------------eE
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG---------------------SF 252 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g---------------------~~ 252 (298)
. .+..++ ..+|+|||||+..... ..+...+++|+.+ ++
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~i 138 (248)
T PRK06123 65 A------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAI 138 (248)
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence 5 444433 3689999999975321 2334556777776 28
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++||..+.... +. .+..|..+|...|.+++.+
T Consensus 139 v~~sS~~~~~~~----------~~-~~~~Y~~sKaa~~~~~~~l 171 (248)
T PRK06123 139 VNVSSMAARLGS----------PG-EYIDYAASKGAIDTMTIGL 171 (248)
T ss_pred EEECchhhcCCC----------CC-CccchHHHHHHHHHHHHHH
Confidence 999997543211 10 1123777777777766543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.9e-10 Score=99.70 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=55.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||++++++|++.|.+ |+++.|... ...+.+.+.+.. ....++.++.+|+++..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~---V~~~~~~~~--~~~~~~~~~l~~-----------~~~~~~~~~~~Dv~d~~ 65 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR---VVLHYHRSA--AAASTLAAELNA-----------RRPNSAVTCQADLSNSA 65 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe---EEEEcCCcH--HHHHHHHHHHHh-----------ccCCceEEEEccCCCch
Confidence 57999999999999999999999877 777765432 111122111110 11235667899999875
Q ss_pred CCC-C-HHHHHH---HhcCccEEEEcCccc
Q psy14522 210 LGL-S-AADRAV---LRRNVTVVFHGAATV 234 (298)
Q Consensus 210 ~gl-~-~~~~~~---l~~~vd~Vih~A~~~ 234 (298)
--. . ...++. ...++|+||||||..
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 66 TLFSRCEAIIDACFRAFGRCDVLVNNASAF 95 (267)
T ss_pred hhHHHHHHHHHHHHHccCCceEEEECCccC
Confidence 100 0 011111 224699999999964
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-10 Score=117.06 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=89.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|++.|++ |+++.|+... .+.+.+.+... ....++..+.+|++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~---Vvi~~r~~~~---~~~~~~~l~~~----------~~~~~~~~v~~Dvt 475 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAH---VVLADLNLEA---AEAVAAEINGQ----------FGAGRAVALKMDVT 475 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEeCCHHH---HHHHHHHHHhh----------cCCCcEEEEECCCC
Confidence 56899999999999999999999999876 8888886321 11111111100 01135778899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|++|||||..... ..+...+++|+.+ +||
T Consensus 476 d~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV 549 (676)
T TIGR02632 476 DEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIV 549 (676)
T ss_pred CHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 865 4444433 689999999974321 2344455666554 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ......|..+|...+.+++.+
T Consensus 550 ~iSS~~a~~~------------~~~~~aY~aSKaA~~~l~r~l 580 (676)
T TIGR02632 550 FIASKNAVYA------------GKNASAYSAAKAAEAHLARCL 580 (676)
T ss_pred EEeChhhcCC------------CCCCHHHHHHHHHHHHHHHHH
Confidence 9999754321 112456888888888887654
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.6e-11 Score=100.03 Aligned_cols=117 Identities=19% Similarity=0.273 Sum_probs=83.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++++||+.|+||+.+.++|++.|.. .+.+..|-+ ..++..+|++... ...+.++++|++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik--~~~i~~~~E-n~~a~akL~ai~p--------------~~~v~F~~~DVt 65 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIK--VLVIDDSEE-NPEAIAKLQAINP--------------SVSVIFIKCDVT 65 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCch--heeehhhhh-CHHHHHHHhccCC--------------CceEEEEEeccc
Confidence 36899999999999999999999999844 344444433 3344444443321 257889999999
Q ss_pred CCCCCCC--HHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------------eEEEEeCCcccC
Q psy14522 207 LPGLGLS--AADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------------SFVHVSTAYTHC 262 (298)
Q Consensus 207 ~~~~gl~--~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------------~~v~iSS~~~~~ 262 (298)
+.. ++. .+..-..+..+|++||+||..+ ..+++..+.+|+.| -+|++||++|..
T Consensus 66 ~~~-~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~ 142 (261)
T KOG4169|consen 66 NRG-DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD 142 (261)
T ss_pred cHH-HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC
Confidence 843 110 1122222347899999999866 66788889999988 789999998753
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2e-10 Score=101.97 Aligned_cols=132 Identities=15% Similarity=0.172 Sum_probs=82.8
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||++ +||.++++.|+++|++ |++..|+.. ..+.+.+... .. ....++.+|
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~---v~~~~r~~~---~~~~~~~l~~------------~~-g~~~~~~~D 66 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAE---LWFTYQSEV---LEKRVKPLAE------------EI-GCNFVSELD 66 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCE---EEEEeCchH---HHHHHHHHHH------------hc-CCceEEEcc
Confidence 4678999999997 8999999999999876 776666421 1122222211 00 122357899
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
++++. .++.+ +.++|++||||+.... ...|...+++|+.+
T Consensus 67 v~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G 140 (260)
T PRK06603 67 VTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG 140 (260)
T ss_pred CCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 99875 33333 3469999999986421 12455567788776
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||..+... ...+..|..+|+.-+.+.+.
T Consensus 141 ~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~ 173 (260)
T PRK06603 141 SIVTLTYYGAEKV------------IPNYNVMGVAKAALEASVKY 173 (260)
T ss_pred eEEEEecCccccC------------CCcccchhhHHHHHHHHHHH
Confidence 8999998754311 11234466666665555443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=101.35 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=81.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||.++++.|+++|++ |+++.|+.. +++.... .++..+.+|+++..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~---v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~~ 58 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR---VLAACRKPD------DVARMNS---------------LGFTGILLDLDDPE 58 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCHH
Confidence 68999999999999999999999865 888888642 1211110 24677889998754
Q ss_pred CCCCHHHHHHHh--------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 210 LGLSAADRAVLR--------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l~--------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
.+..++ ..+|.++|+||..... ..+...+++|+.| +++++|
T Consensus 59 ------~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~s 132 (256)
T PRK08017 59 ------SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTS 132 (256)
T ss_pred ------HHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEc
Confidence 222221 4579999999964311 2344566777765 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
|.++.... ..+..|..+|...|.+.+
T Consensus 133 s~~~~~~~------------~~~~~Y~~sK~~~~~~~~ 158 (256)
T PRK08017 133 SVMGLIST------------PGRGAYAASKYALEAWSD 158 (256)
T ss_pred CcccccCC------------CCccHHHHHHHHHHHHHH
Confidence 98654221 123456777777776654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.9e-10 Score=96.39 Aligned_cols=127 Identities=22% Similarity=0.275 Sum_probs=88.5
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+|+||||++|++++++|+++|++ |++++|++... .+ ..+++++.+|+.++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~---V~~~~R~~~~~------~~-----------------~~~~~~~~~d~~d~~-- 52 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHE---VTALVRSPSKA------ED-----------------SPGVEIIQGDLFDPD-- 52 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSE---EEEEESSGGGH------HH-----------------CTTEEEEESCTTCHH--
T ss_pred eEEECCCChHHHHHHHHHHHCCCE---EEEEecCchhc------cc-----------------ccccccceeeehhhh--
Confidence 799999999999999999999866 99999985421 11 268999999998875
Q ss_pred CCHHHHHHHhcCccEEEEcCcccCcccc-HHH----HhhccccceEEEEeCCcccCCCCC-ccCcCCCCCCChHHHHHHH
Q psy14522 212 LSAADRAVLRRNVTVVFHGAATVRFDEN-IKV----AIAINIFGSFVHVSTAYTHCPRQE-IDEVFYPPPYDYKDFMELV 285 (298)
Q Consensus 212 l~~~~~~~l~~~vd~Vih~A~~~~~~~~-~~~----~~~~Nv~g~~v~iSS~~~~~~~~~-~~E~~~~~p~~~y~~yk~s 285 (298)
.+...+.++|+|||+++....... ... +.+.++. +++++||......... ... .....+..|...
T Consensus 53 ----~~~~al~~~d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~-~~v~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~ 123 (183)
T PF13460_consen 53 ----SVKAALKGADAVIHAAGPPPKDVDAAKNIIEAAKKAGVK-RVVYLSSAGVYRDPPGLFSD----EDKPIFPEYARD 123 (183)
T ss_dssp ----HHHHHHTTSSEEEECCHSTTTHHHHHHHHHHHHHHTTSS-EEEEEEETTGTTTCTSEEEG----GTCGGGHHHHHH
T ss_pred ----hhhhhhhhcchhhhhhhhhcccccccccccccccccccc-cceeeeccccCCCCCccccc----ccccchhhhHHH
Confidence 788889999999999986433211 111 1122322 9999999866543211 111 111223567788
Q ss_pred HHHHHHHHhh
Q psy14522 286 MSRSDDNLEE 295 (298)
Q Consensus 286 K~~aE~~l~~ 295 (298)
|..+|+.+++
T Consensus 124 ~~~~e~~~~~ 133 (183)
T PF13460_consen 124 KREAEEALRE 133 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888764
|
... |
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=98.21 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=83.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||+++++.|++.|.+ |+++.|.... .+++. . ..+.++.+|+++..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~---v~~~~r~~~~---~~~~~---~---------------~~~~~~~~D~~~~~ 57 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR---VIATARDAAA---LAALQ---A---------------LGAEALALDVADPA 57 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE---EEEEECCHHH---HHHHH---h---------------ccceEEEecCCCHH
Confidence 58999999999999999999999866 8888886321 11111 0 23567899999875
Q ss_pred CCCCHHHHHHH---hc--CccEEEEcCcccCc---------cccHHHHhhccccc-----------------eEEEEeCC
Q psy14522 210 LGLSAADRAVL---RR--NVTVVFHGAATVRF---------DENIKVAIAINIFG-----------------SFVHVSTA 258 (298)
Q Consensus 210 ~gl~~~~~~~l---~~--~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g-----------------~~v~iSS~ 258 (298)
.+..+ +. ++|++||+||.... ...+...+++|+.+ +++++||.
T Consensus 58 ------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~ 131 (222)
T PRK06953 58 ------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSR 131 (222)
T ss_pred ------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCc
Confidence 34443 22 58999999997521 12345567777775 68899886
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..... +..+...|..+|...+.+++..
T Consensus 132 ~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~~ 160 (222)
T PRK06953 132 MGSIGDA---------TGTTGWLYRASKAALNDALRAA 160 (222)
T ss_pred ccccccc---------cCCCccccHHhHHHHHHHHHHH
Confidence 4422110 1111124677777777776543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-10 Score=101.28 Aligned_cols=113 Identities=20% Similarity=0.228 Sum_probs=69.0
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|||||||||||+++++.|++.|++ |++++|+....... ....+ .++.. .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~-----------------------~~~~~--~~~~~-~-- 49 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHE---VTILTRSPPAGANT-----------------------KWEGY--KPWAP-L-- 49 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCE---EEEEeCCCCCCCcc-----------------------cceee--ecccc-c--
Confidence 689999999999999999999876 99999975432100 00001 11111 1
Q ss_pred CCHHHHHHHhcCccEEEEcCcccCccc-----cHHHHhhccccc----------------eEEEEeCC--cccCCCCCcc
Q psy14522 212 LSAADRAVLRRNVTVVFHGAATVRFDE-----NIKVAIAINIFG----------------SFVHVSTA--YTHCPRQEID 268 (298)
Q Consensus 212 l~~~~~~~l~~~vd~Vih~A~~~~~~~-----~~~~~~~~Nv~g----------------~~v~iSS~--~~~~~~~~~~ 268 (298)
.+...+.++|+|||+|+...... ....++++|+.+ .|++.||+ |+.....++.
T Consensus 50 ----~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~ 125 (292)
T TIGR01777 50 ----AESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFT 125 (292)
T ss_pred ----chhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcC
Confidence 23445578999999999754321 223456677766 34555554 3433344677
Q ss_pred CcCCCCCCChH
Q psy14522 269 EVFYPPPYDYK 279 (298)
Q Consensus 269 E~~~~~p~~~y 279 (298)
|+.+..+.+.+
T Consensus 126 E~~~~~~~~~~ 136 (292)
T TIGR01777 126 EEDSPAGDDFL 136 (292)
T ss_pred cccCCCCCChH
Confidence 87644444433
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=99.62 Aligned_cols=117 Identities=18% Similarity=0.223 Sum_probs=81.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++||||||.++||+.++.+++++|.. +.+.+....... +-.+ ..+ .. .++..+.+|++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~---~vl~Din~~~~~--etv~-~~~------------~~-g~~~~y~cdis 96 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAK---LVLWDINKQGNE--ETVK-EIR------------KI-GEAKAYTCDIS 96 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCe---EEEEeccccchH--HHHH-HHH------------hc-CceeEEEecCC
Confidence 46899999999999999999999999754 777776643221 1111 111 01 36889999999
Q ss_pred CCC-CCCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 207 LPG-LGLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 207 ~~~-~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
+++ +-....++++-.+.+|++|||||.+... +..+..+++|+.| ++|.++|+.|
T Consensus 97 ~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG 176 (300)
T KOG1201|consen 97 DREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAG 176 (300)
T ss_pred CHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhc
Confidence 875 1111223333344799999999987532 3345678899988 9999999976
Q ss_pred cC
Q psy14522 261 HC 262 (298)
Q Consensus 261 ~~ 262 (298)
..
T Consensus 177 ~~ 178 (300)
T KOG1201|consen 177 LF 178 (300)
T ss_pred cc
Confidence 53
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.2e-10 Score=97.38 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=82.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+||||+|+||++++++|+++|+. ..|....|..... ....++.++.+|+++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~-~~v~~~~~~~~~~-----------------------~~~~~~~~~~~Dls~~~ 56 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPD-ATVHATYRHHKPD-----------------------FQHDNVQWHALDVTDEA 56 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCC-CEEEEEccCCccc-----------------------cccCceEEEEecCCCHH
Confidence 57999999999999999999999654 2355555543210 00147788999999865
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCcc-------------ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFD-------------ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------------~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
....+.+.++++|++|||||..... ..+...+.+|+.+ +++++||.
T Consensus 57 ---~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~ 133 (235)
T PRK09009 57 ---EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAK 133 (235)
T ss_pred ---HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeec
Confidence 1112333445799999999976321 1233456777766 78888875
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+.... . +...+..|..+|...+.+.+.
T Consensus 134 ~~~~~~-----~----~~~~~~~Y~asK~a~~~~~~~ 161 (235)
T PRK09009 134 VGSISD-----N----RLGGWYSYRASKAALNMFLKT 161 (235)
T ss_pred cccccc-----C----CCCCcchhhhhHHHHHHHHHH
Confidence 432111 0 111234566667766666553
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.2e-10 Score=97.57 Aligned_cols=127 Identities=16% Similarity=0.130 Sum_probs=85.9
Q ss_pred eecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCC
Q psy14522 133 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGL 212 (298)
Q Consensus 133 LVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl 212 (298)
+||||+|+||++++++|+++|++ |+++.|+.. ++...... + ....+++++.+|++++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~---v~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~Dl~~~~--- 58 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR---VTIASRSRD------RLAAAARA-----L-----GGGAPVRTAALDITDEA--- 58 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----H-----hcCCceEEEEccCCCHH---
Confidence 69999999999999999999876 888888632 11111110 0 01246888999999876
Q ss_pred CHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCCcccCCCCCcc
Q psy14522 213 SAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEID 268 (298)
Q Consensus 213 ~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~ 268 (298)
.+..+++ ++|++||+||..... ..+...+++|+.+ ++|++||..+...
T Consensus 59 ---~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~----- 130 (230)
T PRK07041 59 ---AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP----- 130 (230)
T ss_pred ---HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----
Confidence 5555544 589999999974321 2345566777665 8999998865422
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
......|..+|+..+.+.+..
T Consensus 131 -------~~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 131 -------SASGVLQGAINAALEALARGL 151 (230)
T ss_pred -------CCcchHHHHHHHHHHHHHHHH
Confidence 112345777888887776654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4e-10 Score=97.81 Aligned_cols=101 Identities=18% Similarity=0.267 Sum_probs=71.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||+++++.|+++|++ |+++.|+.. ++.+.... .++.++.+|++++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~---v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~~~~ 57 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHK---VTLVGARRD------DLEVAAKE--------------LDVDAIVCDNTDPA 57 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh--------------ccCcEEecCCCCHH
Confidence 46999999999999999999999876 888887532 22221110 13567889999865
Q ss_pred CCCCHHHHHHHhc----CccEEEEcCcccC---------c---cccHHHHhhccccc----------------eEEEEeC
Q psy14522 210 LGLSAADRAVLRR----NVTVVFHGAATVR---------F---DENIKVAIAINIFG----------------SFVHVST 257 (298)
Q Consensus 210 ~gl~~~~~~~l~~----~vd~Vih~A~~~~---------~---~~~~~~~~~~Nv~g----------------~~v~iSS 257 (298)
.+..+++ .+|++||||+... + ...+...+++|+.+ ++|++||
T Consensus 58 ------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS 131 (223)
T PRK05884 58 ------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVP 131 (223)
T ss_pred ------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEec
Confidence 4444443 6899999997421 1 13456678888887 8999988
Q ss_pred Cc
Q psy14522 258 AY 259 (298)
Q Consensus 258 ~~ 259 (298)
..
T Consensus 132 ~~ 133 (223)
T PRK05884 132 EN 133 (223)
T ss_pred CC
Confidence 64
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.1e-10 Score=98.11 Aligned_cols=132 Identities=16% Similarity=0.104 Sum_probs=84.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+||||+|+||.++++.|++.|++ |+++.|+... .+.+.+... ...++.++.+|+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~-------------~~~~~~~~~~Dl~~ 64 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ---VCINSRNENK---LKRMKKTLS-------------KYGNIHYVVGDVSS 64 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH-------------hcCCeEEEECCCCC
Confidence 5789999999999999999999999876 8888886321 112211111 01367889999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-----ccHHHHhhccccc----------------eEEEEeCCc
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-----ENIKVAIAINIFG----------------SFVHVSTAY 259 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-----~~~~~~~~~Nv~g----------------~~v~iSS~~ 259 (298)
+. .+..+ ...+|.+||+++..... ..+...++.|+.+ ++|++||..
T Consensus 65 ~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 65 TE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 65 33332 34579999999854211 2233445666664 699999875
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+... +......|..+|+..+.+++.
T Consensus 139 ~~~~-----------~~~~~~~Y~~sK~~~~~~~~~ 163 (238)
T PRK05786 139 GIYK-----------ASPDQLSYAVAKAGLAKAVEI 163 (238)
T ss_pred hccc-----------CCCCchHHHHHHHHHHHHHHH
Confidence 4211 111233567777776666554
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.5e-10 Score=99.23 Aligned_cols=134 Identities=16% Similarity=0.154 Sum_probs=86.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||+++++.|++.|.+ +|+++.|.... .....+.+. ....++.++.+|++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 66 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEK---GEAQAAELE------------ALGAKAVFVQADLS 66 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHH---HHHHHHHHH------------hcCCeEEEEEccCC
Confidence 46789999999999999999999999854 37888886321 111111111 11246788899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+.+++ .++|++||+||.... ...+...+++|+.+ ++|
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 140 (260)
T PRK06198 67 DVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIV 140 (260)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 865 343332 368999999996431 12234455666655 599
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||..+.... ...+.|..+|...|.+.+.
T Consensus 141 ~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 170 (260)
T PRK06198 141 NIGSMSAHGGQ------------PFLAAYCASKGALATLTRN 170 (260)
T ss_pred EECCcccccCC------------CCcchhHHHHHHHHHHHHH
Confidence 99997654221 1134567777777766654
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.8e-10 Score=100.68 Aligned_cols=113 Identities=18% Similarity=0.204 Sum_probs=74.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-------chhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-------TVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|+++||||+++||.++++.|++.|.+ |+++.|+.... +..+.+.+.+. ....++.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~ 70 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGAT---VYVTGRSTRARRSEYDRPETIEETAELVT------------AAGGRGI 70 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecccccccccccccchHHHHHHHHH------------hcCCceE
Confidence 46899999999999999999999999876 88888864211 11111211111 1124577
Q ss_pred EEecCCCCCCCCCCHHHHHHH-------hcCccEEEEcC-ccc------C-c----cccHHHHhhccccc----------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVL-------RRNVTVVFHGA-ATV------R-F----DENIKVAIAINIFG---------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l-------~~~vd~Vih~A-~~~------~-~----~~~~~~~~~~Nv~g---------- 250 (298)
++.+|++++. .+..+ +.++|++|||| +.. . + ...+...+++|+.+
T Consensus 71 ~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp 144 (305)
T PRK08303 71 AVQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALP 144 (305)
T ss_pred EEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999865 33333 34689999999 632 1 1 12234456777766
Q ss_pred --------eEEEEeCCcc
Q psy14522 251 --------SFVHVSTAYT 260 (298)
Q Consensus 251 --------~~v~iSS~~~ 260 (298)
+||++||..+
T Consensus 145 ~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 145 LLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HhhhCCCcEEEEECCccc
Confidence 8999998643
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-10 Score=91.52 Aligned_cols=134 Identities=20% Similarity=0.164 Sum_probs=85.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++++||||+|+||.++++.|+++|.. .|+++.|+.............+. ....++.++.+|++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~ 66 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR--HLVLLSRSGPDAPGAAELLAELE------------ALGAEVTVVACDVADRA 66 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC--eEEEEeCCCCCCccHHHHHHHHH------------hcCCeEEEEECCCCCHH
Confidence 57999999999999999999998753 37777776433221111001111 11246778899998754
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~~~~ 261 (298)
.+..++ ..+|.+||+||..... ..+...+++|+.+ +++++||..+.
T Consensus 67 ------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~ 140 (180)
T smart00822 67 ------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGV 140 (180)
T ss_pred ------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHh
Confidence 333332 3579999999965321 2345567777766 78999987543
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.. ...+..|..+|...+.+++.
T Consensus 141 ~~------------~~~~~~y~~sk~~~~~~~~~ 162 (180)
T smart00822 141 LG------------NPGQANYAAANAFLDALAAH 162 (180)
T ss_pred cC------------CCCchhhHHHHHHHHHHHHH
Confidence 21 11234567778877777643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.4e-10 Score=98.99 Aligned_cols=131 Identities=18% Similarity=0.167 Sum_probs=81.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
++++||||+|+||++++++|++.|++ |+++ .|+.. ..+.....+. ....++.++.+|++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~---v~~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~d~ 63 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYT---VAVNYQQNLH---AAQEVVNLIT------------QAGGKAFVLQADISDE 63 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCChH---HHHHHHHHHH------------hCCCeEEEEEccCCCH
Confidence 57999999999999999999999876 6553 44321 1111111111 1124578899999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc---------------------eE
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG---------------------SF 252 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g---------------------~~ 252 (298)
+ .+..++ ..+|+|||+|+..... ..+...+++|+.+ +|
T Consensus 64 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 64 N------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 5 344433 3579999999964211 2334556777776 39
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+.... | ..+..|..+|...+.+++.
T Consensus 138 v~~sS~~~~~~~----------~-~~~~~Y~~sK~~~~~~~~~ 169 (247)
T PRK09730 138 VNVSSAASRLGA----------P-GEYVDYAASKGAIDTLTTG 169 (247)
T ss_pred EEECchhhccCC----------C-CcccchHhHHHHHHHHHHH
Confidence 999997543211 1 0112366666666666553
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-10 Score=105.30 Aligned_cols=139 Identities=21% Similarity=0.213 Sum_probs=83.3
Q ss_pred cCceeeec----CCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHH-HHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 128 RGASVFVT----GGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDE-LFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 128 ~~k~vLVT----GatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~-~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
..++|||| |||||||++|++.|+++|++ |++++|+..... .+.. .+. .+..+ ...+++++.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~---V~~l~R~~~~~~---~~~~~~~~--~~~~l------~~~~v~~v~ 116 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE---VTLFTRGKEPSQ---KMKKEPFS--RFSEL------SSAGVKTVW 116 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCE---EEEEecCCcchh---hhccCchh--hhhHh------hhcCceEEE
Confidence 45789999 99999999999999999877 999999754211 1100 000 00000 013588899
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcccC-ccccHHH-HhhccccceEEEEeCCcccC--CCCCccCcCCCCCCCh
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKV-AIAINIFGSFVHVSTAYTHC--PRQEIDEVFYPPPYDY 278 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~-~~~~Nv~g~~v~iSS~~~~~--~~~~~~E~~~~~p~~~ 278 (298)
+|+.+.. ... ...++|+|||+++... .....-+ ..+.++. +|||+||.++++ ...+..|+.+..|..
T Consensus 117 ~D~~d~~------~~~-~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvk-r~V~~SS~~vyg~~~~~p~~E~~~~~p~~- 187 (378)
T PLN00016 117 GDPADVK------SKV-AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLK-QFLFCSSAGVYKKSDEPPHVEGDAVKPKA- 187 (378)
T ss_pred ecHHHHH------hhh-ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCC-EEEEEccHhhcCCCCCCCCCCCCcCCCcc-
Confidence 9987521 111 1247999999987421 0111111 1122222 999999975543 333556655444332
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy14522 279 KDFMELVMSRSDDNLEE 295 (298)
Q Consensus 279 y~~yk~sK~~aE~~l~~ 295 (298)
+|+.+|+++++
T Consensus 188 ------sK~~~E~~l~~ 198 (378)
T PLN00016 188 ------GHLEVEAYLQK 198 (378)
T ss_pred ------hHHHHHHHHHH
Confidence 68999988764
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.3e-10 Score=115.89 Aligned_cols=90 Identities=26% Similarity=0.288 Sum_probs=69.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||++++++|+++|++ |++++|..... ...++.++.+|+.+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~---Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~~ 53 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHE---VVGIARHRPDS------------------------WPSSADFIAADIRDAT 53 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCchhh------------------------cccCceEEEeeCCCHH
Confidence 57999999999999999999999876 88888863210 0135778999999876
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
.+..+++++|+|||+||.... .+++|+.| +|||+||.
T Consensus 54 ------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 54 ------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred ------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 678888899999999986432 12334433 89999996
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-10 Score=99.11 Aligned_cols=132 Identities=13% Similarity=0.132 Sum_probs=83.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++|||++|+||.++++.|+++|.. |+++.|+... .+...+.+. ....++.++.+|++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~---vi~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 64 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAK---LALIDLNQEK---LEEAVAECG------------ALGTEVRGYAANVT 64 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 35789999999999999999999999865 8888876421 111111111 11246788999998
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc----------------cccHHHHhhccccc-------------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF----------------DENIKVAIAINIFG------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~----------------~~~~~~~~~~Nv~g------------- 250 (298)
+.. .+..+ ..++|+|||+||.... ...+...+++|+.|
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~ 138 (253)
T PRK08217 65 DEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMI 138 (253)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 864 23222 2358999999995321 02234456677765
Q ss_pred ------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+++++||....+. .+ ...|..+|...+.+++.
T Consensus 139 ~~~~~~~iv~~ss~~~~~~----------~~---~~~Y~~sK~a~~~l~~~ 176 (253)
T PRK08217 139 ESGSKGVIINISSIARAGN----------MG---QTNYSASKAGVAAMTVT 176 (253)
T ss_pred hcCCCeEEEEEccccccCC----------CC---CchhHHHHHHHHHHHHH
Confidence 5888888643221 12 23466677766666554
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=96.16 Aligned_cols=110 Identities=18% Similarity=0.277 Sum_probs=71.9
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+++||||+|+||.++++.|+++|++ |+++.|... ...+.+.+.+.. . .....+..+.+|++++.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~---v~~~~r~~~--~~~~~~~~~~~~--------~--~~~~~~~~~~~D~~~~~- 64 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAK---VFLTDINDA--AGLDAFAAEINA--------A--HGEGVAFAAVQDVTDEA- 64 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCcc--hHHHHHHHHHHh--------c--CCCceEEEEEeecCCHH-
Confidence 3899999999999999999999876 888888632 112222221110 0 00123456788998865
Q ss_pred CCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 211 GLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 211 gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
.+..+ ..++|++|||||..... ..+...+++|+.+ +|+++||.
T Consensus 65 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~ 139 (251)
T PRK07069 65 -----QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSV 139 (251)
T ss_pred -----HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecCh
Confidence 33333 34689999999975421 2344556777764 89999998
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
.+.
T Consensus 140 ~~~ 142 (251)
T PRK07069 140 AAF 142 (251)
T ss_pred hhc
Confidence 654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.1e-10 Score=101.26 Aligned_cols=114 Identities=20% Similarity=0.156 Sum_probs=70.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||.++++.|++.|++ |+++.|+.. ..+.+.+.+.. .....+.++.+|++++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~---vv~~~r~~~---~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~ 63 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE---LFLTDRDAD---GLAQTVADARA-----------LGGTVPEHRALDISDYD 63 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHh-----------cCCCcceEEEeeCCCHH
Confidence 57999999999999999999999865 888887532 11111111110 01123456789998865
Q ss_pred CCC-CHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEeCCcc
Q psy14522 210 LGL-SAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVSTAYT 260 (298)
Q Consensus 210 ~gl-~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iSS~~~ 260 (298)
.-. ..+.......++|++|||||..... ..+...+++|+.| +||++||..+
T Consensus 64 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~ 141 (272)
T PRK07832 64 AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG 141 (272)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc
Confidence 100 0011222234689999999964321 2334456667665 7999999754
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.8e-10 Score=96.49 Aligned_cols=129 Identities=18% Similarity=0.194 Sum_probs=81.8
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
++|||++|+||+++++.|+++|++ |+++.|.... ..+.+...+. ....++.++.+|++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~---v~~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~~~~-- 61 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK---VIITYRSSEE--GAEEVVEELK------------AYGVKALGVVCDVSDRE-- 61 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCchh--HHHHHHHHHH------------hcCCceEEEEecCCCHH--
Confidence 689999999999999999999876 8888886421 1111111111 11246788999999865
Q ss_pred CCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCc
Q psy14522 212 LSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAY 259 (298)
Q Consensus 212 l~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~ 259 (298)
.+..++ ..+|+|||+||..... ..+...+++|+.+ +|+++||..
T Consensus 62 ----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 62 ----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVV 137 (239)
T ss_pred ----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 444433 3579999999975321 2334455666665 699999975
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+.... .+ ...|..+|...+.+.+.
T Consensus 138 ~~~g~---------~~---~~~y~~~k~a~~~~~~~ 161 (239)
T TIGR01830 138 GLMGN---------AG---QANYAASKAGVIGFTKS 161 (239)
T ss_pred ccCCC---------CC---CchhHHHHHHHHHHHHH
Confidence 43211 11 23466666666655543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.2e-10 Score=94.23 Aligned_cols=111 Identities=22% Similarity=0.300 Sum_probs=76.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||.+++++|.++ .+ |+++.|+.. .+.+|+++.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~---vi~~~r~~~--------------------------------~~~~D~~~~~ 44 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HE---VITAGRSSG--------------------------------DVQVDITDPA 44 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-Cc---EEEEecCCC--------------------------------ceEecCCChH
Confidence 47999999999999999999888 55 888877521 3567888765
Q ss_pred CCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcccCC
Q psy14522 210 LGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYTHCP 263 (298)
Q Consensus 210 ~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~ 263 (298)
.++.+++ ++|++|||||..... ..+...+++|+.+ +|+++||+.+...
T Consensus 45 ------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~ 118 (199)
T PRK07578 45 ------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP 118 (199)
T ss_pred ------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC
Confidence 4544443 799999999964321 2345556778776 6899998765321
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
...+..|..+|..-+.+.+
T Consensus 119 ------------~~~~~~Y~~sK~a~~~~~~ 137 (199)
T PRK07578 119 ------------IPGGASAATVNGALEGFVK 137 (199)
T ss_pred ------------CCCchHHHHHHHHHHHHHH
Confidence 1123445566665555544
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.2e-10 Score=111.03 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=89.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|.+ |++++|+... .+.+...+. .. .++.++.+|++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~---Vvl~~r~~~~---~~~~~~~l~------------~~-~~v~~v~~Dvt 480 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGAC---VVLADLDEEA---AEAAAAELG------------GP-DRALGVACDVT 480 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEeCCHHH---HHHHHHHHh------------cc-CcEEEEEecCC
Confidence 46799999999999999999999999865 8888886421 111111111 00 47889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+.. .+..++ .++|+||||||..... ..+...+++|+.| +||
T Consensus 481 d~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV 554 (681)
T PRK08324 481 DEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIV 554 (681)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 343333 3789999999964321 2334445566555 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...++.|..+|...+.+++.+
T Consensus 555 ~vsS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 585 (681)
T PRK08324 555 FIASKNAVNP------------GPNFGAYGAAKAAELHLVRQL 585 (681)
T ss_pred EECCccccCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 9999754321 122456888888888887654
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=96.59 Aligned_cols=96 Identities=20% Similarity=0.185 Sum_probs=69.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+++++||||+|+||+++++.|++.|.+ |+++.|+... ...... . .....+.+|+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~---Vi~~~r~~~~-----~~~~~~-------------~--~~~~~~~~D~ 67 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAK---VIGLTHSKIN-----NSESND-------------E--SPNEWIKWEC 67 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEECCchh-----hhhhhc-------------c--CCCeEEEeeC
Confidence 356899999999999999999999999876 8888886421 111000 0 1125678899
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc----cccHHHHhhccccc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF----DENIKVAIAINIFG 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g 250 (298)
++.. .+...+.++|++|||||.... ...+...+++|+.|
T Consensus 68 ~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g 110 (245)
T PRK12367 68 GKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALS 110 (245)
T ss_pred CCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHH
Confidence 8765 667777889999999997432 23456677888887
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.5e-10 Score=96.21 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=70.3
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+||||+|+||.++++.|+++|.+ |+++.|.... ..+.+.+.+. ....++.++.+|+++..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~~~~~l~------------~~~~~~~~~~~Dl~~~~-- 61 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE---ICVHYHSGRS--DAESVVSAIQ------------AQGGNARLLQFDVADRV-- 61 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHH------------HcCCeEEEEEccCCCHH--
Confidence 689999999999999999999876 7777765321 1111111111 11246889999999875
Q ss_pred CCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEEeCC
Q psy14522 212 LSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHVSTA 258 (298)
Q Consensus 212 l~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~iSS~ 258 (298)
++..+ ...+|++|||||.... ...+...+++|+.| +||++||.
T Consensus 62 ----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~ 137 (239)
T TIGR01831 62 ----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASV 137 (239)
T ss_pred ----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcch
Confidence 33333 2368999999996431 12344456666655 68999997
Q ss_pred cc
Q psy14522 259 YT 260 (298)
Q Consensus 259 ~~ 260 (298)
.+
T Consensus 138 ~~ 139 (239)
T TIGR01831 138 SG 139 (239)
T ss_pred hh
Confidence 54
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.1e-10 Score=106.62 Aligned_cols=108 Identities=25% Similarity=0.339 Sum_probs=74.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++||||+|+||..+++.|+++|.+ |+++.|.... +.+.+.... -+..++.+|++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~---vi~~~~~~~~----~~l~~~~~~--------------~~~~~~~~Dv~ 266 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAH---VVCLDVPAAG----EALAAVANR--------------VGGTALALDIT 266 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCccH----HHHHHHHHH--------------cCCeEEEEeCC
Confidence 46799999999999999999999999866 8888775321 222222110 12357788998
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ .++|+||||||.... ...+...+++|+.| +||+
T Consensus 267 ~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~ 340 (450)
T PRK08261 267 APD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVG 340 (450)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 865 333332 368999999997532 13455567777766 7999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+.+.
T Consensus 341 ~SS~~~~ 347 (450)
T PRK08261 341 VSSISGI 347 (450)
T ss_pred ECChhhc
Confidence 9997553
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=97.14 Aligned_cols=131 Identities=17% Similarity=0.162 Sum_probs=84.3
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++|||| ++.||.++++.|++.|.+ |++..|+... +..+.+.+. ...++.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~---v~l~~r~~~~-~~~~~~~~~---------------~~~~~~~~~~D 65 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAE---VVLTGFGRAL-RLTERIAKR---------------LPEPAPVLELD 65 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCE---EEEecCccch-hHHHHHHHh---------------cCCCCcEEeCC
Confidence 45789999999 899999999999999876 8888775321 111111111 11356788999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------c----ccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------D----ENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~----~~~~~~~~~Nv~g---------------- 250 (298)
+++++ .+..+ ..++|++|||||.... . ..+...+++|+.|
T Consensus 66 v~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g 139 (256)
T PRK07889 66 VTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGG 139 (256)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Confidence 99865 33332 3469999999997521 1 2334457888887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+++++|+... .+...|..|..+|+.-+.+.+.
T Consensus 140 ~Iv~is~~~~-------------~~~~~~~~Y~asKaal~~l~~~ 171 (256)
T PRK07889 140 SIVGLDFDAT-------------VAWPAYDWMGVAKAALESTNRY 171 (256)
T ss_pred eEEEEeeccc-------------ccCCccchhHHHHHHHHHHHHH
Confidence 6777764311 1112355677777776666554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.4e-10 Score=107.82 Aligned_cols=129 Identities=19% Similarity=0.172 Sum_probs=86.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+++||||+++||.++++.|+++|++ |+++.|+.. ++.+... +...++.++.+|+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~ 62 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ---VVVADRNVE------RARERAD------------SLGPDHHALAMDVSD 62 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceeEEEeccCC
Confidence 5789999999999999999999999876 888888632 2222111 112456788999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc---------cccHHHHhhccccc-------------------eE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF---------DENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g-------------------~~ 252 (298)
++ .+..++ .++|++|||||.... ...+...+++|+.+ ++
T Consensus 63 ~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~i 136 (520)
T PRK06484 63 EA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAI 136 (520)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeE
Confidence 75 333332 468999999986311 13355667788776 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+.... | .+..|..+|+..+.+.+.
T Consensus 137 v~isS~~~~~~~----------~--~~~~Y~asKaal~~l~~~ 167 (520)
T PRK06484 137 VNVASGAGLVAL----------P--KRTAYSASKAAVISLTRS 167 (520)
T ss_pred EEECCcccCCCC----------C--CCchHHHHHHHHHHHHHH
Confidence 999997554221 1 123466666766666543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.8e-10 Score=98.19 Aligned_cols=131 Identities=16% Similarity=0.173 Sum_probs=82.5
Q ss_pred eeeecCCCCCCchhHHHHHHH----hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLR----ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~----~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++||||+++||.+++++|++ .|.+ |+++.|+... .+.+.+.+.. . ....++.++.+|++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~---V~~~~r~~~~---~~~~~~~l~~--------~--~~~~~v~~~~~Dl~ 65 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSV---LVLSARNDEA---LRQLKAEIGA--------E--RSGLRVVRVSLDLG 65 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcE---EEEEEcCHHH---HHHHHHHHHh--------c--CCCceEEEEEeccC
Confidence 689999999999999999997 5655 8888886321 1122111110 0 01236788999999
Q ss_pred CCCCCCCHHHHHHHhc-----------CccEEEEcCcccCc-----c-----ccHHHHhhccccc---------------
Q psy14522 207 LPGLGLSAADRAVLRR-----------NVTVVFHGAATVRF-----D-----ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-----------~vd~Vih~A~~~~~-----~-----~~~~~~~~~Nv~g--------------- 250 (298)
++. .+..+++ +.|++|||||.... . ..+...+++|+.|
T Consensus 66 ~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~ 139 (256)
T TIGR01500 66 AEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS 139 (256)
T ss_pred CHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence 865 3433332 12699999996421 1 2345577888877
Q ss_pred -----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+++++||..+... ...+..|..+|...+.+.+.
T Consensus 140 ~~~~~~iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~ 177 (256)
T TIGR01500 140 PGLNRTVVNISSLCAIQP------------FKGWALYCAGKAARDMLFQV 177 (256)
T ss_pred CCCCCEEEEECCHHhCCC------------CCCchHHHHHHHHHHHHHHH
Confidence 5889999754321 11244577777777666554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=90.64 Aligned_cols=106 Identities=17% Similarity=0.244 Sum_probs=71.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.+.|+||||+.+||..|+++|+.. ..+..++...|+... +.+.++... ....|+++++.|+++.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~--a~~~l~~k~-------------~~d~rvHii~Ldvt~d 66 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEK--AATELALKS-------------KSDSRVHIIQLDVTCD 66 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHH--hhHHHHHhh-------------ccCCceEEEEEecccH
Confidence 467999999999999999999987 666666666665432 122222111 1237999999999875
Q ss_pred C-CCCCHHHHHHH--hcCccEEEEcCcccC-cc-------ccHHHHhhccccc
Q psy14522 209 G-LGLSAADRAVL--RRNVTVVFHGAATVR-FD-------ENIKVAIAINIFG 250 (298)
Q Consensus 209 ~-~gl~~~~~~~l--~~~vd~Vih~A~~~~-~~-------~~~~~~~~~Nv~g 250 (298)
+ ..-...+++.+ .++++++|+|||... +. ..+.+.+++|+.|
T Consensus 67 eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~ 119 (249)
T KOG1611|consen 67 ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVG 119 (249)
T ss_pred HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchh
Confidence 4 11122344444 346899999999752 11 2345677899888
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=101.65 Aligned_cols=97 Identities=20% Similarity=0.260 Sum_probs=70.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||++++++|+++|.+ |+++.|+.. ++..... .....+..+.+|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~---Vi~l~r~~~------~l~~~~~------------~~~~~v~~v~~Dvs 234 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAK---VVALTSNSD------KITLEIN------------GEDLPVKTLHWQVG 234 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHh------------hcCCCeEEEEeeCC
Confidence 46889999999999999999999999866 888887532 1111111 00124667889998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc----ccHHHHhhccccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD----ENIKVAIAINIFG 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~----~~~~~~~~~Nv~g 250 (298)
+.+ .+...++++|++|||||..... +.+...+++|+.|
T Consensus 235 d~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g 276 (406)
T PRK07424 235 QEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFS 276 (406)
T ss_pred CHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 865 6777788999999999964321 2445677888887
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.6e-09 Score=88.00 Aligned_cols=111 Identities=23% Similarity=0.343 Sum_probs=77.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+.+||||||+.+||..+++++.+.|.. |++..|+. +++.+... ....+....+|+.|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~---VIi~gR~e------~~L~e~~~-------------~~p~~~t~v~Dv~d 61 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNT---VIICGRNE------ERLAEAKA-------------ENPEIHTEVCDVAD 61 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCE---EEEecCcH------HHHHHHHh-------------cCcchheeeecccc
Confidence 5779999999999999999999999866 88888863 45555432 12567778899988
Q ss_pred CCCCCCHHHHHHHh---cCccEEEEcCcccC---cc------ccHHHHhhccccc------------------eEEEEeC
Q psy14522 208 PGLGLSAADRAVLR---RNVTVVFHGAATVR---FD------ENIKVAIAINIFG------------------SFVHVST 257 (298)
Q Consensus 208 ~~~gl~~~~~~~l~---~~vd~Vih~A~~~~---~~------~~~~~~~~~Nv~g------------------~~v~iSS 257 (298)
.+. -.+-++.+. ..++++|||||... +. ....+-+.+|+.+ .+|.+||
T Consensus 62 ~~~--~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSS 139 (245)
T COG3967 62 RDS--RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS 139 (245)
T ss_pred hhh--HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecc
Confidence 651 001122222 25899999999863 22 1234456788887 8999999
Q ss_pred CcccC
Q psy14522 258 AYTHC 262 (298)
Q Consensus 258 ~~~~~ 262 (298)
.-++.
T Consensus 140 GLafv 144 (245)
T COG3967 140 GLAFV 144 (245)
T ss_pred ccccC
Confidence 75543
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.3e-09 Score=93.45 Aligned_cols=83 Identities=10% Similarity=0.087 Sum_probs=57.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||++.||.++++.|++.|.+ |++..|..+. .+.+.+.+. ....++..+.+|++
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~---V~~~~r~~~~---l~~~~~~i~------------~~~~~~~~~~~D~~ 64 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGAT---LILCDQDQSA---LKDTYEQCS------------ALTDNVYSFQLKDF 64 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHHHHHH------------hcCCCeEEEEccCC
Confidence 35789999999999999999999999876 8888886421 112111111 11245677889998
Q ss_pred CCCCCCCHHHHHHH-------hc-CccEEEEcCcc
Q psy14522 207 LPGLGLSAADRAVL-------RR-NVTVVFHGAAT 233 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~-~vd~Vih~A~~ 233 (298)
+++ ++..+ +. ++|++|||||.
T Consensus 65 ~~~------~~~~~~~~~~~~~g~~iD~li~nag~ 93 (227)
T PRK08862 65 SQE------SIRHLFDAIEQQFNRAPDVLVNNWTS 93 (227)
T ss_pred CHH------HHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 765 33322 24 79999999974
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=7e-10 Score=110.20 Aligned_cols=93 Identities=22% Similarity=0.265 Sum_probs=68.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||+++++.|+++|++ |++++|..... ...+++++.+|+.++.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~---Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~~ 53 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHT---VSGIAQHPHDA------------------------LDPRVDYVCASLRNPV 53 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCChhhc------------------------ccCCceEEEccCCCHH
Confidence 47999999999999999999999876 89998853210 0146788999998763
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc-------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG-------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g-------------~~v~iSS~~~~ 261 (298)
+..++.++|+|||+|+..... .. .+|+.| ++||+||.++.
T Consensus 54 -------l~~al~~~D~VIHLAa~~~~~-~~----~vNv~Gt~nLleAA~~~GvRiV~~SS~~G~ 106 (699)
T PRK12320 54 -------LQELAGEADAVIHLAPVDTSA-PG----GVGITGLAHVANAAARAGARLLFVSQAAGR 106 (699)
T ss_pred -------HHHHhcCCCEEEEcCccCccc-hh----hHHHHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 556677899999999864211 11 123332 89999998653
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.7e-09 Score=94.46 Aligned_cols=145 Identities=19% Similarity=0.156 Sum_probs=93.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++|||++..||++++..|++.|.+ |++..|..... +.....+.. . .....++..+.+|+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~---v~i~~r~~~~~---~~~~~~~~~--------~-~~~~~~~~~~~~Dv 69 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAK---VVITGRSEERL---EETAQELGG--------L-GYTGGKVLAIVCDV 69 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHHh--------c-CCCCCeeEEEECcC
Confidence 357899999999999999999999999866 88888864321 111111110 0 01135788999999
Q ss_pred CCCCC--CCCHHHHHHHhcCccEEEEcCcccCcc--------ccHHHHhhccccc-------------------eEEEEe
Q psy14522 206 SLPGL--GLSAADRAVLRRNVTVVFHGAATVRFD--------ENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 206 ~~~~~--gl~~~~~~~l~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
++..- .+-.......+.++|++|||||..... +.|+..+++|+.| .++++|
T Consensus 70 ~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~s 149 (270)
T KOG0725|consen 70 SKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNIS 149 (270)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 87540 011112222245799999999976422 4566788999996 788888
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+.... .+. + ..|..+|..-+++.+.+
T Consensus 150 s~~~~~~~---------~~~-~-~~Y~~sK~al~~ltr~l 178 (270)
T KOG0725|consen 150 SVAGVGPG---------PGS-G-VAYGVSKAALLQLTRSL 178 (270)
T ss_pred ccccccCC---------CCC-c-ccchhHHHHHHHHHHHH
Confidence 88554321 011 1 35666777777666543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.9e-09 Score=94.82 Aligned_cols=87 Identities=14% Similarity=0.142 Sum_probs=55.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+++||.+++++|. +|.+ |+++.|+... .+.+.+.+.. ....++.++.+|+++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~---Vil~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~Dv~d~~ 62 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGED---VVLAARRPEA---AQGLASDLRQ-----------RGATSVHVLSFDAQDLD 62 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCE---EEEEeCCHHH---HHHHHHHHHh-----------ccCCceEEEEcccCCHH
Confidence 579999999999999999998 4765 8888886431 1122221111 01135788999999875
Q ss_pred CCC-CHHHHHHHhcCccEEEEcCccc
Q psy14522 210 LGL-SAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 210 ~gl-~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
--- ..+.+.+...++|++|||||..
T Consensus 63 ~v~~~~~~~~~~~g~id~lv~nag~~ 88 (246)
T PRK05599 63 THRELVKQTQELAGEISLAVVAFGIL 88 (246)
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCcC
Confidence 100 0112222234799999999975
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.9e-09 Score=96.09 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=70.9
Q ss_pred eecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 133 FVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 133 LVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
+||||+++||.+++++|+++| +. |++..|+... .+.+.+.+. ....++.++.+|+++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~d~~-- 60 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH---VVMACRDFLK---AERAAKSAG------------MPKDSYTVMHLDLASLD-- 60 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE---EEEEeCCHHH---HHHHHHHhc------------CCCCeEEEEEecCCCHH--
Confidence 699999999999999999998 55 8888876321 111111110 11246788899999865
Q ss_pred CCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc--------------------eEEEEe
Q psy14522 212 LSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG--------------------SFVHVS 256 (298)
Q Consensus 212 l~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g--------------------~~v~iS 256 (298)
.+..++ .++|++|||||.... ...+...+++|+.| ++|++|
T Consensus 61 ----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vs 136 (308)
T PLN00015 61 ----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVG 136 (308)
T ss_pred ----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 333332 368999999997421 12445667788776 699999
Q ss_pred CCccc
Q psy14522 257 TAYTH 261 (298)
Q Consensus 257 S~~~~ 261 (298)
|+.+.
T Consensus 137 S~~~~ 141 (308)
T PLN00015 137 SITGN 141 (308)
T ss_pred ccccc
Confidence 98653
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.2e-09 Score=92.90 Aligned_cols=122 Identities=19% Similarity=0.217 Sum_probs=72.7
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+|||||||||++|+..|.+.|++ |++++|++.... .+ ....+..+ +
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~---v~iltR~~~~~~--~~-------------------~~~~v~~~-------~-- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQ---VTILTRRPPKAS--QN-------------------LHPNVTLW-------E-- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCe---EEEEEcCCcchh--hh-------------------cCcccccc-------c--
Confidence 689999999999999999999887 999999865321 00 00111100 0
Q ss_pred CCHHHHHHHhc-CccEEEEcCcccCccccHHH-----Hhhccccc----------------eEEEEeCC--cccCCCCCc
Q psy14522 212 LSAADRAVLRR-NVTVVFHGAATVRFDENIKV-----AIAINIFG----------------SFVHVSTA--YTHCPRQEI 267 (298)
Q Consensus 212 l~~~~~~~l~~-~vd~Vih~A~~~~~~~~~~~-----~~~~Nv~g----------------~~v~iSS~--~~~~~~~~~ 267 (298)
.+..... ++|+|||+||..-+...|.. +++.-+.. .+|.-|.+ |+......+
T Consensus 48 ----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~ 123 (297)
T COG1090 48 ----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV 123 (297)
T ss_pred ----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee
Confidence 2333333 79999999997544333321 22221111 34444443 677767788
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHH
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDN 292 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~ 292 (298)
+|+. ++.+.+..--+-.|..|..
T Consensus 124 tE~~--~~g~~Fla~lc~~WE~~a~ 146 (297)
T COG1090 124 TEES--PPGDDFLAQLCQDWEEEAL 146 (297)
T ss_pred ecCC--CCCCChHHHHHHHHHHHHh
Confidence 8884 3444455555556665544
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.6e-08 Score=87.49 Aligned_cols=120 Identities=19% Similarity=0.274 Sum_probs=76.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||++.||..+++.|++.|.. |++..|..... ..+.+.+.... ... ..+.+...|++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~~~----------~~~-~~~~~~~~Dvs 67 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGAR---VVVAARRSEEE-AAEALAAAIKE----------AGG-GRAAAVAADVS 67 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEcCCCchh-hHHHHHHHHHh----------cCC-CcEEEEEecCC
Confidence 45789999999999999999999988876 77777664321 11111111100 000 35777889999
Q ss_pred C-CC-CCCCHHHHHHHhcCccEEEEcCcccCc--------cccHHHHhhccccc---------------eEEEEeCCccc
Q psy14522 207 L-PG-LGLSAADRAVLRRNVTVVFHGAATVRF--------DENIKVAIAINIFG---------------SFVHVSTAYTH 261 (298)
Q Consensus 207 ~-~~-~gl~~~~~~~l~~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g---------------~~v~iSS~~~~ 261 (298)
+ .. ..-..+.......++|++|||||.... ...++..+++|+.| ++|++||+.+.
T Consensus 68 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 68 DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL 147 (251)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc
Confidence 7 33 000011222223459999999997532 13556678888887 58999998654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=92.24 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=82.5
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCcc-ccCCeEEEec
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPH-FRSKISVVTG 203 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~-~~~~v~~v~~ 203 (298)
+++|++||||| +.+||.++++.|.+.|.+ |++ .|.... .+++.......-.......... .......+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~---Vv~-~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAE---ILV-GTWVPA---LNIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEE-EeCcch---hhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 67999999999 799999999999999876 666 554221 1222211110000000000000 0112356778
Q ss_pred CC--CCCC-CC-----------CCHHHHHHH-------hcCccEEEEcCcccC-----c----cccHHHHhhccccc---
Q psy14522 204 DV--SLPG-LG-----------LSAADRAVL-------RRNVTVVFHGAATVR-----F----DENIKVAIAINIFG--- 250 (298)
Q Consensus 204 Dl--~~~~-~g-----------l~~~~~~~l-------~~~vd~Vih~A~~~~-----~----~~~~~~~~~~Nv~g--- 250 (298)
|+ +++. +. ...+.+..+ +.++|++|||||... + ...|...+++|+.+
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3222 00 001122222 346899999997421 1 13556678889888
Q ss_pred -------------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -------------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -------------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+... .|. ..+.|..+|..-+.+.+.
T Consensus 160 l~~~~~p~m~~~G~II~isS~a~~~~----------~p~-~~~~Y~asKaAl~~l~~~ 206 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLTYIASERI----------IPG-YGGGMSSAKAALESDTRV 206 (303)
T ss_pred HHHHHHHHHhcCCEEEEEechhhcCC----------CCC-CchhhHHHHHHHHHHHHH
Confidence 8999999755321 111 012466667666665543
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.8e-08 Score=90.46 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=67.8
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|+||||||++|++++++|++.|++ |.+++|+..... ..+++.+.+|+.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~---V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~~- 52 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP---FLVASRSSSSSA------------------------GPNEKHVKFDWLDED- 52 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc---EEEEeCCCcccc------------------------CCCCccccccCCCHH-
Confidence 4899999999999999999999877 999999864211 135566788998876
Q ss_pred CCCHHHHHHHh------cC-ccEEEEcCcccCcc-ccH----HHHhhccccceEEEEeCCc
Q psy14522 211 GLSAADRAVLR------RN-VTVVFHGAATVRFD-ENI----KVAIAINIFGSFVHVSTAY 259 (298)
Q Consensus 211 gl~~~~~~~l~------~~-vd~Vih~A~~~~~~-~~~----~~~~~~Nv~g~~v~iSS~~ 259 (298)
.+...+ ++ +|.++|+++..... ... +...+.++. +||++||..
T Consensus 53 -----~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~-~~V~~Ss~~ 107 (285)
T TIGR03649 53 -----TWDNPFSSDDGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVR-RFVLLSASI 107 (285)
T ss_pred -----HHHHHHhcccCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCC-EEEEeeccc
Confidence 677776 56 99999998753211 111 112223333 999999864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.1e-08 Score=87.47 Aligned_cols=108 Identities=20% Similarity=0.276 Sum_probs=78.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+|.|+|||+-.++|..++++|.+.|.. |++-.-.+.+ .+.+.... ..+++..+..|++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~---V~Agcl~~~g---ae~L~~~~--------------~s~rl~t~~LDVT 86 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFR---VFAGCLTEEG---AESLRGET--------------KSPRLRTLQLDVT 86 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCE---EEEEeecCch---HHHHhhhh--------------cCCcceeEeeccC
Confidence 45789999999999999999999999977 7665533222 22222111 0378889999999
Q ss_pred CCCCCCCHHHHHHHhc---------CccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eE
Q psy14522 207 LPGLGLSAADRAVLRR---------NVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~---------~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~ 252 (298)
+++ .+.+..+ +.=.+|||||+..+. .++...+++|+.| |+
T Consensus 87 ~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRv 160 (322)
T KOG1610|consen 87 KPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRV 160 (322)
T ss_pred CHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeE
Confidence 986 4444433 356899999965322 4567788999999 99
Q ss_pred EEEeCCcc
Q psy14522 253 VHVSTAYT 260 (298)
Q Consensus 253 v~iSS~~~ 260 (298)
|++||+.|
T Consensus 161 VnvsS~~G 168 (322)
T KOG1610|consen 161 VNVSSVLG 168 (322)
T ss_pred EEeccccc
Confidence 99999976
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.4e-07 Score=79.65 Aligned_cols=105 Identities=21% Similarity=0.330 Sum_probs=75.7
Q ss_pred cCceeeecCC-CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGG-TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGa-tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+.|+|||+ .|+||.+|++++.+.|+. |+...|+-. +..++-. ..++.....|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~---V~AtaR~~e------~M~~L~~--------------~~gl~~~kLDV~ 62 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYL---VYATARRLE------PMAQLAI--------------QFGLKPYKLDVS 62 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeE---EEEEccccc------hHhhHHH--------------hhCCeeEEeccC
Confidence 3578999985 689999999999999977 898888643 1221111 146889999999
Q ss_pred CCCCCCCHHHHHHH--------hcCccEEEEcCcccC-c------cccHHHHhhccccc-----------------eEEE
Q psy14522 207 LPGLGLSAADRAVL--------RRNVTVVFHGAATVR-F------DENIKVAIAINIFG-----------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l--------~~~vd~Vih~A~~~~-~------~~~~~~~~~~Nv~g-----------------~~v~ 254 (298)
+++ .+... ...+|+++||||..- + ....++.+++|+.| .+|+
T Consensus 63 ~~~------~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVn 136 (289)
T KOG1209|consen 63 KPE------EVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVN 136 (289)
T ss_pred ChH------HHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEE
Confidence 876 22222 225899999999742 1 13456678999999 8999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+.|+.+.
T Consensus 137 vgSl~~~ 143 (289)
T KOG1209|consen 137 VGSLAGV 143 (289)
T ss_pred ecceeEE
Confidence 9998554
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.7e-08 Score=81.26 Aligned_cols=109 Identities=23% Similarity=0.307 Sum_probs=66.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC-CccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK-KGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
+++|||++|.||..+++.|+++| ..+|+++.|+. ......+.+.+... ...++.++.+|+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~--~~~~il~~r~~~~~~~~~~~i~~l~~-------------~g~~v~~~~~Dv~d~~ 66 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG--ARRLILLGRSGAPSAEAEAAIRELES-------------AGARVEYVQCDVTDPE 66 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHH-------------TT-EEEEEE--TTSHH
T ss_pred EEEEECCccHHHHHHHHHHHHcC--CCEEEEeccCCCccHHHHHHHHHHHh-------------CCCceeeeccCccCHH
Confidence 68999999999999999999997 35799999983 22222223322211 2358899999999876
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCCcc
Q psy14522 210 LGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTAYT 260 (298)
Q Consensus 210 ~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~~~ 260 (298)
++.+++. .++.|||+|+..... ..+...+...+.| .||.+||+.+
T Consensus 67 ------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~ 139 (181)
T PF08659_consen 67 ------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISS 139 (181)
T ss_dssp ------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHH
T ss_pred ------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhH
Confidence 5666643 578999999975311 1223334444444 7899999854
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.2e-08 Score=83.00 Aligned_cols=141 Identities=20% Similarity=0.191 Sum_probs=98.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
...|+.||||-||.=|++|++.|+..|++ |..++|..+.- ...|++.+.... ............||++
T Consensus 26 r~rkvALITGItGQDGSYLaEfLL~KgYe---VHGiiRRsSsF-NT~RIeHlY~nP--------~~h~~~~mkLHYgDmT 93 (376)
T KOG1372|consen 26 RPRKVALITGITGQDGSYLAEFLLSKGYE---VHGIIRRSSSF-NTARIEHLYSNP--------HTHNGASMKLHYGDMT 93 (376)
T ss_pred ccceEEEEecccCCCchHHHHHHHhCCce---eeEEEeecccc-chhhhhhhhcCc--------hhcccceeEEeecccc
Confidence 34578999999999999999999999988 88888876532 245666554321 1122356788899999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCcccc--HHH-Hhhccccc-----------------eEEEEeCC--cccC
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFDEN--IKV-AIAINIFG-----------------SFVHVSTA--YTHC 262 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~--~~~-~~~~Nv~g-----------------~~v~iSS~--~~~~ 262 (298)
|.. .+..++. .++-|+|+|+..+..-+ +.+ .-++...| ||-..||. ||..
T Consensus 94 Dss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv 167 (376)
T KOG1372|consen 94 DSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKV 167 (376)
T ss_pred chH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccc
Confidence 977 5666666 57899999997542211 100 00111111 88888885 7766
Q ss_pred CCCCccCcCCCCCCChHHHHHHH
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELV 285 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~s 285 (298)
...|..|..|..|-+||+..|+.
T Consensus 168 ~e~PQsE~TPFyPRSPYa~aKmy 190 (376)
T KOG1372|consen 168 QEIPQSETTPFYPRSPYAAAKMY 190 (376)
T ss_pred cCCCcccCCCCCCCChhHHhhhh
Confidence 67788999999999999887753
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=3e-07 Score=81.97 Aligned_cols=114 Identities=17% Similarity=0.254 Sum_probs=77.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
++-.+|||||.+||+..+++|+++|.+ |+++.|..+. .+++.+.+.+ ...-.++++..|++++
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~n---vvLIsRt~~K---L~~v~kEI~~-----------~~~vev~~i~~Dft~~ 111 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFN---VVLISRTQEK---LEAVAKEIEE-----------KYKVEVRIIAIDFTKG 111 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHH-----------HhCcEEEEEEEecCCC
Confidence 478999999999999999999999988 9999997432 2333333221 1124578899999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccC-cc--------ccHHHHhhccccc------------------eEEEEeCCc
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVR-FD--------ENIKVAIAINIFG------------------SFVHVSTAY 259 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~-~~--------~~~~~~~~~Nv~g------------------~~v~iSS~~ 259 (298)
+- ..+.+...+. .+.++|||+|... .. ....+.+.+|+.+ -++++||..
T Consensus 112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~a 189 (312)
T KOG1014|consen 112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFA 189 (312)
T ss_pred ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccc
Confidence 62 1223333334 3669999999864 11 1223456667766 788898876
Q ss_pred cc
Q psy14522 260 TH 261 (298)
Q Consensus 260 ~~ 261 (298)
+.
T Consensus 190 g~ 191 (312)
T KOG1014|consen 190 GL 191 (312)
T ss_pred cc
Confidence 54
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.4e-08 Score=94.27 Aligned_cols=77 Identities=45% Similarity=0.765 Sum_probs=66.4
Q ss_pred CccccccCCeEEEecCcccchHHHHHHHHhhCCChHHhHHhhccCCCCchhhhhhhhhhhhhh---------hcCceeee
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREF---------YRGASVFV 134 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~~~~~~~~~rl~~~~~~~~~---------~~~k~vLV 134 (298)
++.+|+.+.++|.||||||+|+++++++|+.+|.+++||+++|+++|.++.+|+..+..-+.| ...|.+.|
T Consensus 5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi 84 (467)
T KOG1221|consen 5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPI 84 (467)
T ss_pred cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceec
Confidence 388999999999999999999999999999999999999999999999999999766432221 34678889
Q ss_pred cCCCCC
Q psy14522 135 TGGTGF 140 (298)
Q Consensus 135 TGatG~ 140 (298)
.|...-
T Consensus 85 ~GDi~~ 90 (467)
T KOG1221|consen 85 AGDISE 90 (467)
T ss_pred cccccC
Confidence 998763
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-07 Score=78.37 Aligned_cols=115 Identities=19% Similarity=0.172 Sum_probs=78.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.++.+.++||||+..||++++..|.+.|.. |.+.+++....++..+ .+ +.+ ..-..+.+|+
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Gar---v~v~dl~~~~A~ata~---~L------------~g~-~~h~aF~~DV 71 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGAR---VAVADLDSAAAEATAG---DL------------GGY-GDHSAFSCDV 71 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcE---EEEeecchhhHHHHHh---hc------------CCC-Cccceeeecc
Confidence 356789999999999999999999999876 6666665432221111 11 111 2345678999
Q ss_pred CCCCCC-CCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc--------------------eEEEEeC
Q psy14522 206 SLPGLG-LSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG--------------------SFVHVST 257 (298)
Q Consensus 206 ~~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------------~~v~iSS 257 (298)
++++-- -..++...-...+++++||||+... ...|.+.+.+|+.| ++|++||
T Consensus 72 S~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsS 151 (256)
T KOG1200|consen 72 SKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSS 151 (256)
T ss_pred CcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehh
Confidence 986510 0012233334479999999998742 26788889999998 8999999
Q ss_pred Cc
Q psy14522 258 AY 259 (298)
Q Consensus 258 ~~ 259 (298)
+-
T Consensus 152 IV 153 (256)
T KOG1200|consen 152 IV 153 (256)
T ss_pred hh
Confidence 83
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-07 Score=80.62 Aligned_cols=120 Identities=23% Similarity=0.186 Sum_probs=77.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|||||++|.+|++|.+.+..+|.+-..-+ +.-++ .+||++..
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wv-f~~sk-----------------------------------d~DLt~~a 45 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWV-FIGSK-----------------------------------DADLTNLA 45 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceE-Eeccc-----------------------------------cccccchH
Confidence 6899999999999999999999876322222 22111 24666644
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCc---c-ccHHHHhhccccc--------------eEEEEeCC--cccCCCCCc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRF---D-ENIKVAIAINIFG--------------SFVHVSTA--YTHCPRQEI 267 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~---~-~~~~~~~~~Nv~g--------------~~v~iSS~--~~~~~~~~~ 267 (298)
+.+.+++ .+.+|||+|+.++- + ....+|+..|+.- +++++.|. |......|+
T Consensus 46 ------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPI 119 (315)
T KOG1431|consen 46 ------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPI 119 (315)
T ss_pred ------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCC
Confidence 5666665 58999999998741 1 1122344444332 77777665 444445688
Q ss_pred cCcCCC--CCCChHHHHHHHHHHHHH
Q psy14522 268 DEVFYP--PPYDYKDFMELVMSRSDD 291 (298)
Q Consensus 268 ~E~~~~--~p~~~y~~yk~sK~~aE~ 291 (298)
+|+... +|....-+|..+|.+.+-
T Consensus 120 dEtmvh~gpphpsN~gYsyAKr~idv 145 (315)
T KOG1431|consen 120 DETMVHNGPPHPSNFGYSYAKRMIDV 145 (315)
T ss_pred CHHHhccCCCCCCchHHHHHHHHHHH
Confidence 898653 344445578888877654
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-07 Score=82.34 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=87.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+-++-|.|||||+|++++.+|.+.|.+ |++--|........-+ . . .....+.+...|+.|
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~GSQ---viiPyR~d~~~~r~lk---v-----m--------GdLGQvl~~~fd~~D 120 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMGSQ---VIIPYRGDEYDPRHLK---V-----M--------GDLGQVLFMKFDLRD 120 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcCCe---EEEeccCCccchhhee---e-----c--------ccccceeeeccCCCC
Confidence 4567788999999999999999999876 8888887543211000 0 0 112567788889888
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYP 273 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~ 273 (298)
++ .+....+..++|||+.|.--.+.++ .+.++|+.+ |||++|+....
T Consensus 121 ed------SIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan------------ 181 (391)
T KOG2865|consen 121 ED------SIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEAGVERFIHVSCLGAN------------ 181 (391)
T ss_pred HH------HHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhhChhheeehhhcccc------------
Confidence 76 8888889999999999963222322 245667666 99999987422
Q ss_pred CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 274 PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 274 ~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
....+-+-.+|.++|..++++
T Consensus 182 --v~s~Sr~LrsK~~gE~aVrda 202 (391)
T KOG2865|consen 182 --VKSPSRMLRSKAAGEEAVRDA 202 (391)
T ss_pred --ccChHHHHHhhhhhHHHHHhh
Confidence 112334555666666666554
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=76.86 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=58.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++++++||||+|+||..+++.|++.|++ |++..|+... .+...+.+. ....+..++.+|++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~---V~l~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~ 75 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAK---VIVTDIDQES---GQATVEEIT------------NLGGEALFVSYDME 75 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46899999999999999999999999866 8888876321 111111111 11235667899998
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccC
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVR 235 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~ 235 (298)
+.. ++..+ +.++|++|||||...
T Consensus 76 ~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 76 KQG------DWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 764 33332 347999999999643
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.8e-07 Score=103.01 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=79.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc--------hhHHHHHHHH-----------------
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT--------VSERLDELFE----------------- 180 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~--------~~~rl~~~~~----------------- 180 (298)
+..++++|||||+++||..+++.|++++ -.+|+++.|+..... ....+.....
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~--ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQC--QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhc--CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 3468899999999999999999999983 134888888721000 0000100000
Q ss_pred --------HHHHhhhhhcCccccCCeEEEecCCCCCCCCCCHHHHHHHh------cCccEEEEcCcccCc-------ccc
Q psy14522 181 --------DRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLR------RNVTVVFHGAATVRF-------DEN 239 (298)
Q Consensus 181 --------~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~-------~~~ 239 (298)
......+... .....++.++.+|+++.. .+..++ .++|.||||||.... ...
T Consensus 2072 ~~~~~~~~~ei~~~la~l-~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~ 2144 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAF-KAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEE 2144 (2582)
T ss_pred cccccchhHHHHHHHHHH-HhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHH
Confidence 0000001100 122357889999999865 333332 258999999997531 145
Q ss_pred HHHHhhccccc--------------eEEEEeCCccc
Q psy14522 240 IKVAIAINIFG--------------SFVHVSTAYTH 261 (298)
Q Consensus 240 ~~~~~~~Nv~g--------------~~v~iSS~~~~ 261 (298)
+...+++|+.| +||++||+.+.
T Consensus 2145 f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~ 2180 (2582)
T TIGR02813 2145 FNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGF 2180 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhc
Confidence 66778999998 79999998654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-07 Score=77.85 Aligned_cols=127 Identities=21% Similarity=0.209 Sum_probs=86.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
++.+++|++||+.-+||+.++..|.+.|.. |+.+.|.+. .+.+..+ +....+..+.+|+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~---ViAvaR~~a------~L~sLV~------------e~p~~I~Pi~~Dl 62 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ---VIAVARNEA------NLLSLVK------------ETPSLIIPIVGDL 62 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCE---EEEEecCHH------HHHHHHh------------hCCcceeeeEecc
Confidence 457899999999999999999999999866 999999743 2333222 2224588999999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCcccC---c----cccHHHHhhccccc-------------------eEEEEe
Q psy14522 206 SLPGLGLSAADRAVLRR---NVTVVFHGAATVR---F----DENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~---~----~~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
+..+ .+.+++. .+|.++||||..- | .++++..+++|+.+ .++++|
T Consensus 63 s~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvS 136 (245)
T KOG1207|consen 63 SAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVS 136 (245)
T ss_pred cHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEec
Confidence 8754 4444443 4799999999642 1 13445567788877 789999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHH
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSR 288 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~ 288 (298)
|.....+ ...+..|+.+|.+--+
T Consensus 137 Sqas~R~---------~~nHtvYcatKaALDm 159 (245)
T KOG1207|consen 137 SQASIRP---------LDNHTVYCATKAALDM 159 (245)
T ss_pred chhcccc---------cCCceEEeecHHHHHH
Confidence 8754321 1234456666655433
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.3e-07 Score=80.47 Aligned_cols=119 Identities=21% Similarity=0.232 Sum_probs=82.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+||||||++|++++++|++.|++ |..++|+...... .. ..+.+..+|+.++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~---v~~~~r~~~~~~~---------------------~~-~~v~~~~~d~~~~~ 55 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHE---VRAAVRNPEAAAA---------------------LA-GGVEVVLGDLRDPK 55 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCE---EEEEEeCHHHHHh---------------------hc-CCcEEEEeccCCHh
Confidence 47999999999999999999999876 9999997542110 01 47889999999987
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCcccc-H-----H----HHhhccccc--eEEEEeCCcccCCCCCccCcCCCCCCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDEN-I-----K----VAIAINIFG--SFVHVSTAYTHCPRQEIDEVFYPPPYD 277 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~-~-----~----~~~~~Nv~g--~~v~iSS~~~~~~~~~~~E~~~~~p~~ 277 (298)
.+...+++++.++++.+... ... . . ...+.. .+ +++++|...+.. .
T Consensus 56 ------~l~~a~~G~~~~~~i~~~~~-~~~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~--------------~ 113 (275)
T COG0702 56 ------SLVAGAKGVDGVLLISGLLD-GSDAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA--------------A 113 (275)
T ss_pred ------HHHHHhccccEEEEEecccc-cccchhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC--------------C
Confidence 78888899999999988654 211 0 0 011111 11 566666654321 1
Q ss_pred hHHHHHHHHHHHHHHHhh
Q psy14522 278 YKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 278 ~y~~yk~sK~~aE~~l~~ 295 (298)
....|..+|+.+|+++..
T Consensus 114 ~~~~~~~~~~~~e~~l~~ 131 (275)
T COG0702 114 SPSALARAKAAVEAALRS 131 (275)
T ss_pred CccHHHHHHHHHHHHHHh
Confidence 234577778888888764
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.51 E-value=3e-07 Score=80.46 Aligned_cols=130 Identities=15% Similarity=0.194 Sum_probs=82.8
Q ss_pred CCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC-CC
Q psy14522 136 GGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL-GL 212 (298)
Q Consensus 136 Gat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~-gl 212 (298)
|++ +.||+++++.|+++|.+ |++..|+... ..+.+++.... ....++.+|++++.- .-
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~---V~~~~~~~~~--~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~ 61 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGAN---VILTDRNEEK--LADALEELAKE--------------YGAEVIQCDLSDEESVEA 61 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEE---EEEEESSHHH--HHHHHHHHHHH--------------TTSEEEESCTTSHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCE---EEEEeCChHH--HHHHHHHHHHH--------------cCCceEeecCcchHHHHH
Confidence 566 99999999999999876 8888887431 12223322221 123369999998651 00
Q ss_pred CHHHHHHHh-cCccEEEEcCcccCc---c--------ccHHHHhhccccc----------------eEEEEeCCcccCCC
Q psy14522 213 SAADRAVLR-RNVTVVFHGAATVRF---D--------ENIKVAIAINIFG----------------SFVHVSTAYTHCPR 264 (298)
Q Consensus 213 ~~~~~~~l~-~~vd~Vih~A~~~~~---~--------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~~ 264 (298)
-.+...+.. .++|++|||++.... . ..+...+++|+.+ ++|++||+.+..
T Consensus 62 ~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-- 139 (241)
T PF13561_consen 62 LFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-- 139 (241)
T ss_dssp HHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS--
T ss_pred HHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc--
Confidence 011222335 679999999987543 1 2345567777777 999999985432
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+...|..|..+|+.-+.+.+.+
T Consensus 140 ----------~~~~~~~y~~sKaal~~l~r~l 161 (241)
T PF13561_consen 140 ----------PMPGYSAYSASKAALEGLTRSL 161 (241)
T ss_dssp ----------BSTTTHHHHHHHHHHHHHHHHH
T ss_pred ----------cCccchhhHHHHHHHHHHHHHH
Confidence 2234557777888777776654
|
... |
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.1e-07 Score=77.21 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=61.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCC--cceEEEecCCCCc-cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPH--LERVYLLVRPKKG-KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~--v~~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..|.++|||++.+||.+|+.+|++...+ +-++++..|.-+. ++...++.+. .|...-+++++..|
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f------------~p~~~i~~~yvlvD 69 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAF------------HPKSTIEVTYVLVD 69 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHh------------CCCceeEEEEEEEe
Confidence 3578999999999999999999987322 1244555565332 2233333222 23333578899999
Q ss_pred CCCCCCCC-CHHHHHHHhcCccEEEEcCcccC
Q psy14522 205 VSLPGLGL-SAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 205 l~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
+++...-+ ...++.+-++++|.|+-|||.+.
T Consensus 70 ~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~ 101 (341)
T KOG1478|consen 70 VSNMQSVFRASKDIKQRFQRLDYIYLNAGIMP 101 (341)
T ss_pred hhhHHHHHHHHHHHHHHhhhccEEEEccccCC
Confidence 99854111 12344455668999999999863
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.6e-07 Score=83.87 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=29.8
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+|+++|||++ .+||+++++.|.++|.+ |++..|
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~---Vvv~~~ 42 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGAT---ILVGTW 42 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE---EEEEec
Confidence 468999999995 89999999999999977 666543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.2e-06 Score=74.58 Aligned_cols=75 Identities=28% Similarity=0.369 Sum_probs=57.4
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+|+||||.+|+++++.|++.++. |.++.|+.+. .+..+ ++. ..++++.+|+.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~---V~~l~R~~~~----~~~~~-l~~--------------~g~~vv~~d~~~~~-- 56 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS---VRALVRDPSS----DRAQQ-LQA--------------LGAEVVEADYDDPE-- 56 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC---EEEEESSSHH----HHHHH-HHH--------------TTTEEEES-TT-HH--
T ss_pred CEEECCccHHHHHHHHHHHhCCCC---cEEEEeccch----hhhhh-hhc--------------ccceEeecccCCHH--
Confidence 799999999999999999998766 9999998631 11111 111 46678899998766
Q ss_pred CCHHHHHHHhcCccEEEEcCccc
Q psy14522 212 LSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 212 l~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.+...++++|.||.+-+..
T Consensus 57 ----~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 57 ----SLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp ----HHHHHHTTCSEEEEESSCS
T ss_pred ----HHHHHHcCCceEEeecCcc
Confidence 8999999999999988854
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.9e-07 Score=79.68 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=72.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+|||++..||..++..+..+|.+ |.++.|+........+.-+.. .....+.+..+|+.+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~---Vti~ar~~~kl~~a~~~l~l~-------------~~~~~v~~~S~d~~~Y~ 97 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGAD---VTITARSGKKLLEAKAELELL-------------TQVEDVSYKSVDVIDYD 97 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCc---eEEEeccHHHHHHHHhhhhhh-------------hccceeeEeccccccHH
Confidence 68999999999999999999999988 999999754321111111110 01133678889996654
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcccC--cc-----ccHHHHhhccccc-------------------eEEEEe
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAATVR--FD-----ENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~~~--~~-----~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
+....+ ..+|.+|||||..- .. ...+..+++|..| +|+.+|
T Consensus 98 ------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs 171 (331)
T KOG1210|consen 98 ------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS 171 (331)
T ss_pred ------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh
Confidence 333333 35799999999632 11 2345568888888 788888
Q ss_pred CCc
Q psy14522 257 TAY 259 (298)
Q Consensus 257 S~~ 259 (298)
|..
T Consensus 172 S~~ 174 (331)
T KOG1210|consen 172 SQL 174 (331)
T ss_pred hhh
Confidence 863
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.4e-06 Score=76.28 Aligned_cols=116 Identities=14% Similarity=0.085 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCCCHHHHHHHhc--
Q psy14522 145 LTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRR-- 222 (298)
Q Consensus 145 l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~-- 222 (298)
+++.|+++|++ |++++|+.... ....++.+|+++.+ .+..+++
T Consensus 1 ~a~~l~~~G~~---Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~~------~v~~~~~~~ 45 (241)
T PRK12428 1 TARLLRFLGAR---VIGVDRREPGM--------------------------TLDGFIQADLGDPA------SIDAAVAAL 45 (241)
T ss_pred ChHHHHhCCCE---EEEEeCCcchh--------------------------hhhHhhcccCCCHH------HHHHHHHHh
Confidence 46788888876 88888864321 01235678998765 4554443
Q ss_pred --CccEEEEcCcccCccccHHHHhhccccc----------------eEEEEeCCcccCC--CCCccCcC----------C
Q psy14522 223 --NVTVVFHGAATVRFDENIKVAIAINIFG----------------SFVHVSTAYTHCP--RQEIDEVF----------Y 272 (298)
Q Consensus 223 --~vd~Vih~A~~~~~~~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~--~~~~~E~~----------~ 272 (298)
++|++|||||... ..++...+++|+.| +||++||..+... ..+..|.. .
T Consensus 46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T PRK12428 46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAA 124 (241)
T ss_pred cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHH
Confidence 6899999999753 35677778888877 8999999855431 11111100 0
Q ss_pred ---CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 273 ---PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 273 ---~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..|......|..+|+..+.+.+.+
T Consensus 125 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 125 WLAAHPVALATGYQLSKEALILWTMRQ 151 (241)
T ss_pred hhhccCCCcccHHHHHHHHHHHHHHHH
Confidence 013333456778888777766543
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.8e-06 Score=70.62 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=78.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.++.+||||++.+||..++..+...+.+ ..++...|.... .+.+.+..||...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e-~~r~g~~r~~a~--------------------------~~~L~v~~gd~~v 57 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDE-ALRYGVARLLAE--------------------------LEGLKVAYGDDFV 57 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchH-HHHHhhhccccc--------------------------ccceEEEecCCcc
Confidence 4678999999999999999988888544 223333332211 1345555554433
Q ss_pred CCCCCC--HHHHHHHhc-------CccEEEEcCcccCc----------cccHHHHhhccccc------------------
Q psy14522 208 PGLGLS--AADRAVLRR-------NVTVVFHGAATVRF----------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 208 ~~~gl~--~~~~~~l~~-------~vd~Vih~A~~~~~----------~~~~~~~~~~Nv~g------------------ 250 (298)
...|.- ...+..+.+ +.|+||||||.... ...|+.+++.|+.+
T Consensus 58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~ 137 (253)
T KOG1204|consen 58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN 137 (253)
T ss_pred eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc
Confidence 222211 112222222 47999999997531 13566778888877
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
-+|++||.... .|.+..+.|..+|.+-+.+.+.
T Consensus 138 ~~vVnvSS~aav------------~p~~~wa~yc~~KaAr~m~f~~ 171 (253)
T KOG1204|consen 138 GNVVNVSSLAAV------------RPFSSWAAYCSSKAARNMYFMV 171 (253)
T ss_pred CeEEEecchhhh------------ccccHHHHhhhhHHHHHHHHHH
Confidence 57888886433 3566677777777776666543
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.1e-06 Score=72.44 Aligned_cols=80 Identities=23% Similarity=0.331 Sum_probs=51.1
Q ss_pred cCceeeecCCC----------------CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcC
Q psy14522 128 RGASVFVTGGT----------------GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191 (298)
Q Consensus 128 ~~k~vLVTGat----------------G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~ 191 (298)
.+|+||||+|. ||+|++|++.|+.+|++ |+++.+....... . .
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~---V~li~g~~~~~~~--~----------------~ 60 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH---VIYLHGYFAEKPN--D----------------I 60 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe---EEEEeCCCcCCCc--c----------------c
Confidence 58899999775 99999999999999987 7766653211000 0 0
Q ss_pred ccccCCeEEEec--CCCCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc
Q psy14522 192 PHFRSKISVVTG--DVSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD 237 (298)
Q Consensus 192 ~~~~~~v~~v~~--Dl~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~ 237 (298)
+ ....+..+.+ |+. +.+.+++. ++|+|||+||..+|.
T Consensus 61 ~-~~~~~~~V~s~~d~~--------~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 61 N-NQLELHPFEGIIDLQ--------DKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred C-CceeEEEEecHHHHH--------HHHHHHhcccCCCEEEECcccccee
Confidence 0 0012333444 322 14555563 689999999987654
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.4e-06 Score=80.82 Aligned_cols=100 Identities=32% Similarity=0.547 Sum_probs=74.8
Q ss_pred CCCCccccccCCeEEEecCcccchHHHHHHHHhhCCChHHhHHhhccCCCCchhhhhh-hhhhhh--------------h
Q psy14522 61 VGSPIQEFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD-ELFEDR--------------E 125 (298)
Q Consensus 61 ~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~~~~~~~~~rl~-~~~~~~--------------~ 125 (298)
.+..+.+|+.+..+|.||||||+|+.|+++|++.+|.++++++++|.+++..+.+|++ ++...+ .
T Consensus 109 ~~~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~ 188 (605)
T PLN02503 109 DGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQS 188 (605)
T ss_pred CCcchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccc
Confidence 3667999999999999999999999999999999999999999999998888888884 332211 1
Q ss_pred hhcCceeeecCCCCCC--c--hhHHHHHHHhCCCcceEEEec
Q psy14522 126 FYRGASVFVTGGTGFM--G--KTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 126 ~~~~k~vLVTGatG~i--G--~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+...|.++|.|.-... | ....+.|.+. .+ .|+.+.
T Consensus 189 ~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~-vD--iVIH~A 227 (605)
T PLN02503 189 FMLSKLVPVVGNVCESNLGLEPDLADEIAKE-VD--VIINSA 227 (605)
T ss_pred cccccEEEEEeeCCCcccCCCHHHHHHHHhc-CC--EEEECc
Confidence 1246788898877643 3 3344555544 33 355444
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.4e-05 Score=64.12 Aligned_cols=102 Identities=22% Similarity=0.320 Sum_probs=67.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++-+.+|||+...+|...++.|..+|.. |.+++-..+.-... .+ +...++.+...|+++
T Consensus 8 kglvalvtggasglg~ataerlakqgas---v~lldlp~skg~~v---ak---------------elg~~~vf~padvts 66 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGAS---VALLDLPQSKGADV---AK---------------ELGGKVVFTPADVTS 66 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCce---EEEEeCCcccchHH---HH---------------HhCCceEEeccccCc
Confidence 5678899999999999999999999977 77777654332111 11 234788999999987
Q ss_pred CC-CCCCHHHHHHHhcCccEEEEcCcccC------cc-------ccHHHHhhccccc
Q psy14522 208 PG-LGLSAADRAVLRRNVTVVFHGAATVR------FD-------ENIKVAIAINIFG 250 (298)
Q Consensus 208 ~~-~gl~~~~~~~l~~~vd~Vih~A~~~~------~~-------~~~~~~~~~Nv~g 250 (298)
.. ..-.....+.-+.++|..+||||..- +. +++...+++|+.|
T Consensus 67 ekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~g 123 (260)
T KOG1199|consen 67 EKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLG 123 (260)
T ss_pred HHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeee
Confidence 54 10001112222447999999999741 11 2344557788888
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.7e-06 Score=79.33 Aligned_cols=98 Identities=29% Similarity=0.514 Sum_probs=73.1
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHHHhhCCChHHhHHhhccCCCCchhhhhh-hhhhhh--------------hhh
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD-ELFEDR--------------EFY 127 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~~~~~~~~~rl~-~~~~~~--------------~~~ 127 (298)
+++.+|+.+..+|.||||||+|+.|+++|++.+|.++++++++|++++.+..+|+. ++...+ .+.
T Consensus 3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~ 82 (491)
T PLN02996 3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLI 82 (491)
T ss_pred ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhh
Confidence 47899999999999999999999999999999999999999999998888888874 332211 122
Q ss_pred cCceeeecCCCC--CCch---hHHHHHHHhCCCcceEEEec
Q psy14522 128 RGASVFVTGGTG--FMGK---TLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 128 ~~k~vLVTGatG--~iG~---~l~~~Ll~~g~~v~~V~~l~ 163 (298)
..+..+|.|.-. .+|. ...+.+.+. .+ .|+.+.
T Consensus 83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~-vD--~ViH~A 120 (491)
T PLN02996 83 SEKVTPVPGDISYDDLGVKDSNLREEMWKE-ID--IVVNLA 120 (491)
T ss_pred hcCEEEEecccCCcCCCCChHHHHHHHHhC-CC--EEEECc
Confidence 367889999876 3342 234455554 33 455544
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.3e-05 Score=64.47 Aligned_cols=80 Identities=26% Similarity=0.346 Sum_probs=62.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.++..+|.||||-.|+.+++.+++. +...+|+++.|.+.... .....+.....|..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~----------------------at~k~v~q~~vDf~ 72 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDP----------------------ATDKVVAQVEVDFS 72 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCc----------------------cccceeeeEEechH
Confidence 56789999999999999999999999 56789999999743211 12246667778877
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
..+ ++....+++|+.+++-|...
T Consensus 73 Kl~------~~a~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 73 KLS------QLATNEQGPDVLFCALGTTR 95 (238)
T ss_pred HHH------HHHhhhcCCceEEEeecccc
Confidence 654 67777789999999988764
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.8e-05 Score=61.84 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=60.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|.|.||||.+|++|+++.+++|++ |.+++|++....+ ...+.+++.|+.++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHe---VTAivRn~~K~~~-----------------------~~~~~i~q~Difd~~ 54 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHE---VTAIVRNASKLAA-----------------------RQGVTILQKDIFDLT 54 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCe---eEEEEeChHhccc-----------------------cccceeecccccChh
Confidence 57999999999999999999999988 9999998653211 156788999998876
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.+...+.+.|+||..-+..
T Consensus 55 ------~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 55 ------SLASDLAGHDAVISAFGAG 73 (211)
T ss_pred ------hhHhhhcCCceEEEeccCC
Confidence 6677788999999876654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=3e-05 Score=67.71 Aligned_cols=77 Identities=22% Similarity=0.236 Sum_probs=48.6
Q ss_pred eeeec-CCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 131 SVFVT-GGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 131 ~vLVT-GatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
+-.|| .+|||+|++|++.|+++|++ |+++.|..... +....++.++.++.....
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~---V~li~r~~~~~----------------------~~~~~~v~~i~v~s~~~m 71 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHE---VTLVTTKTAVK----------------------PEPHPNLSIIEIENVDDL 71 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCE---EEEEECccccc----------------------CCCCCCeEEEEEecHHHH
Confidence 34555 57899999999999999977 88777643210 000135555554322110
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~ 236 (298)
.+.+...++++|+|||+||...+
T Consensus 72 ----~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 72 ----LETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred ----HHHHHHHhcCCCEEEeCCccCCc
Confidence 12344556689999999998754
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.81 E-value=4.1e-05 Score=70.32 Aligned_cols=98 Identities=19% Similarity=0.115 Sum_probs=55.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCC----CcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACP----HLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+|+||||+|++|++++..|+..+. ....|+++++......+...-.+ ..+-.....+|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D----------------l~d~~~~~~~~~ 66 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME----------------LQDCAFPLLKSV 66 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee----------------hhhccccccCCc
Confidence 4799999999999999999988642 01258888885431100000000 000000111232
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhcccc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIF 249 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~ 249 (298)
.... .+.+.++++|+|||+||.... ..+..++++.|+.
T Consensus 67 ~~~~------~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~ 105 (325)
T cd01336 67 VATT------DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVK 105 (325)
T ss_pred eecC------CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHH
Confidence 2221 455566899999999998643 3344555555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=8.8e-05 Score=69.00 Aligned_cols=92 Identities=15% Similarity=0.069 Sum_probs=56.3
Q ss_pred hcCceeeecCCCCCCchh--HHHHHHHhCCCcceEEEecCCCCccc---------hhHHHHHHHHHHHHhhhhhcCcccc
Q psy14522 127 YRGASVFVTGGTGFMGKT--LTEKLLRACPHLERVYLLVRPKKGKT---------VSERLDELFEDRLFSRLKAEVPHFR 195 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~--l~~~Ll~~g~~v~~V~~l~R~~~~~~---------~~~rl~~~~~~~~~~~l~~~~~~~~ 195 (298)
..+|++||||+++.+|.+ +++.| +.|.+ |+++.+...... ..+.+.+... ...
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~---Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~------------~~G 102 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD---TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK------------AAG 102 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe---EEEEecCcchhhhcccccccchHHHHHHHHH------------hcC
Confidence 457999999999999999 89999 88876 666664321100 0111222211 112
Q ss_pred CCeEEEecCCCCCCC-CCCHHHHHHHhcCccEEEEcCccc
Q psy14522 196 SKISVVTGDVSLPGL-GLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
..+..+.+|+++++- .-..+.+.+.+.++|++|||+|..
T Consensus 103 ~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 103 LYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 346678999998651 000112222334799999999975
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=97.69 E-value=3.2e-05 Score=66.49 Aligned_cols=133 Identities=17% Similarity=0.127 Sum_probs=77.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+..+|||||+-|.+|..++..|..+ +--..|+..+-.+..+. ..+.=-++..|+-
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~-----------------------V~~~GPyIy~DIL 97 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPAN-----------------------VTDVGPYIYLDIL 97 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchh-----------------------hcccCCchhhhhh
Confidence 34568999999999999999888765 32234555443222110 0112234556666
Q ss_pred CCCCCCCHHHHHHHh--cCccEEEEcCcccCcc--ccHHHHhhccccc-------------eEEEEeCCcccCCCCCc--
Q psy14522 207 LPGLGLSAADRAVLR--RNVTVVFHGAATVRFD--ENIKVAIAINIFG-------------SFVHVSTAYTHCPRQEI-- 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~~~~~-- 267 (298)
+.. .++++. .++|.+||..+..+.. .+..-..++|+.| ++..-|++.++++..|-
T Consensus 98 D~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNP 171 (366)
T KOG2774|consen 98 DQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNP 171 (366)
T ss_pred ccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCC
Confidence 544 344443 3689999998865422 2223345778887 66677888777655432
Q ss_pred -cCcCCCCCCChHHHHHHHHHHHHHH
Q psy14522 268 -DEVFYPPPYDYKDFMELVMSRSDDN 292 (298)
Q Consensus 268 -~E~~~~~p~~~y~~yk~sK~~aE~~ 292 (298)
+.-....|- ..|+.+|..||-+
T Consensus 172 TPdltIQRPR---TIYGVSKVHAEL~ 194 (366)
T KOG2774|consen 172 TPDLTIQRPR---TIYGVSKVHAELL 194 (366)
T ss_pred CCCeeeecCc---eeechhHHHHHHH
Confidence 222233344 4455556666644
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00015 Score=67.76 Aligned_cols=139 Identities=19% Similarity=0.152 Sum_probs=78.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+..+|+|+||||.+|+-+++.|+++|.. |.+++|+..... .+... .........+..+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~---vra~VRd~~~a~---~~~~~-------------~~~d~~~~~v~~~~~ 137 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFS---VRALVRDEQKAE---DLLGV-------------FFVDLGLQNVEADVV 137 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCe---eeeeccChhhhh---hhhcc-------------cccccccceeeeccc
Confidence 45678999999999999999999999977 999999854221 11000 000123334444433
Q ss_pred CCCCCCCHHHHHHHhc----CccEEEEcCcccCcc--------ccHHHHhh---c-cccc--eEEEEeCCcccCCCCCcc
Q psy14522 207 LPGLGLSAADRAVLRR----NVTVVFHGAATVRFD--------ENIKVAIA---I-NIFG--SFVHVSTAYTHCPRQEID 268 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~----~vd~Vih~A~~~~~~--------~~~~~~~~---~-Nv~g--~~v~iSS~~~~~~~~~~~ 268 (298)
... +....+.+ ...+++-+++..+-. -+|+...+ . -..| +++++||+.+.....
T Consensus 138 ~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~--- 209 (411)
T KOG1203|consen 138 TAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ--- 209 (411)
T ss_pred ccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC---
Confidence 321 12233333 345666666643322 12222211 1 1112 999999986543221
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+.+.....+.+..+|.++|+.+++
T Consensus 210 ---~~~~~~~~~~~~~~k~~~e~~~~~ 233 (411)
T KOG1203|consen 210 ---PPNILLLNGLVLKAKLKAEKFLQD 233 (411)
T ss_pred ---CchhhhhhhhhhHHHHhHHHHHHh
Confidence 111222245777888999998764
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=8.4e-05 Score=62.25 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=50.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++|||||||+|. +++.|++.|++ |.++.|+... .+.+...+. ...++.++.+|+.++.
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~---V~v~~R~~~~---~~~l~~~l~-------------~~~~i~~~~~Dv~d~~ 60 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFH---VSVIARREVK---LENVKREST-------------TPESITPLPLDYHDDD 60 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCE---EEEEECCHHH---HHHHHHHhh-------------cCCcEEEEEccCCCHH
Confidence 57999999998876 99999999877 7777775321 111111110 1246788899999865
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCcc
Q psy14522 210 LGLSAADRAVLR-------RNVTVVFHGAAT 233 (298)
Q Consensus 210 ~gl~~~~~~~l~-------~~vd~Vih~A~~ 233 (298)
.+..++ ..+|.+|+.+-.
T Consensus 61 ------sv~~~i~~~l~~~g~id~lv~~vh~ 85 (177)
T PRK08309 61 ------ALKLAIKSTIEKNGPFDLAVAWIHS 85 (177)
T ss_pred ------HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 333333 357788766543
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00022 Score=65.31 Aligned_cols=108 Identities=14% Similarity=0.020 Sum_probs=68.8
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
...+.++|.|+|++|.+|+.++..|...+. ..++.++++......+. .+.+ .... ....+
T Consensus 4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~-~~elvL~Di~~~~g~a~-Dl~~----------------~~~~--~~v~~ 63 (321)
T PTZ00325 4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPH-VSELSLYDIVGAPGVAA-DLSH----------------IDTP--AKVTG 63 (321)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEecCCCccccc-chhh----------------cCcC--ceEEE
Confidence 345667999999999999999998886642 35688888732111111 1110 0011 22334
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc--------------eEEEEeCC
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
.+++. .+.+.++++|+||++||.... ..++.+++..|+.. ++++++|-
T Consensus 64 ~td~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SN 126 (321)
T PTZ00325 64 YADGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSN 126 (321)
T ss_pred ecCCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44433 334566899999999997543 35666777777665 89999995
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00012 Score=68.94 Aligned_cols=80 Identities=20% Similarity=0.189 Sum_probs=53.3
Q ss_pred hhcCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhh
Q psy14522 126 FYRGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKA 189 (298)
Q Consensus 126 ~~~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~ 189 (298)
.+.+|+|+|||| +|.+|.++++.|..+|.+ |+++.+.....
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~---V~~v~~~~~~~-------------------- 241 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD---VTLVSGPVNLP-------------------- 241 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE---EEEeCCCcccc--------------------
Confidence 367899999999 889999999999999977 88777653210
Q ss_pred cCccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCc
Q psy14522 190 EVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 190 ~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~ 236 (298)
....+ ...|+++..- -...+...+..+|++||+||..++
T Consensus 242 ----~~~~~--~~~dv~~~~~--~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 242 ----TPAGV--KRIDVESAQE--MLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred ----CCCCc--EEEccCCHHH--HHHHHHHhcCCCCEEEEccccccc
Confidence 00122 3456665430 011222334579999999998643
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0003 Score=64.47 Aligned_cols=104 Identities=13% Similarity=0.060 Sum_probs=66.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|.|+|++|.+|+.++..|...+. ..++.++++......+. .+.+ ..... ...+++..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~el~L~Di~~~~g~a~-Dl~~----------------~~~~~--~i~~~~~~ 77 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPL-VSELHLYDIANTPGVAA-DVSH----------------INTPA--QVRGFLGD 77 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-CCEEEEEecCCCCeeEc-hhhh----------------CCcCc--eEEEEeCC
Confidence 56899999999999999999987643 35688888765111111 1100 00111 11232222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc--------------eEEEEeCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
. ++...+.++|+|||+||.... ..++.+.+..|+.. ++++++|-
T Consensus 78 ~------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN 136 (323)
T PLN00106 78 D------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN 136 (323)
T ss_pred C------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 2 355677899999999997543 45667777777665 77888774
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=6.9e-05 Score=68.87 Aligned_cols=77 Identities=22% Similarity=0.230 Sum_probs=51.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+++|+||||+|+||+.++++|+.. ..+.+++++.|... ++..... . +..+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~~~------rl~~La~----------------e--l~~~~i 206 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQQE------RLQELQA----------------E--LGGGKI 206 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCCHH------HHHHHHH----------------H--hccccH
Confidence 367899999999999999999999865 22456888888632 2221110 0 001222
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~ 236 (298)
. .+...+.++|+|||+++....
T Consensus 207 ~---------~l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 207 L---------SLEEALPEADIVVWVASMPKG 228 (340)
T ss_pred H---------hHHHHHccCCEEEECCcCCcC
Confidence 1 345667789999999997554
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00033 Score=65.33 Aligned_cols=78 Identities=22% Similarity=0.323 Sum_probs=61.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+|.|+ |++|+.++..|+++|. .+|++.+|+... ..++... ...+++....|+.+..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~---~~~i~~~---------------~~~~v~~~~vD~~d~~ 60 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEK---CARIAEL---------------IGGKVEALQVDAADVD 60 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHH---HHHHHhh---------------ccccceeEEecccChH
Confidence 67999998 9999999999999962 459999997432 2232221 1248999999999876
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.+.+++++.|+|||++...
T Consensus 61 ------al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 61 ------ALVALIKDFDLVINAAPPF 79 (389)
T ss_pred ------HHHHHHhcCCEEEEeCCch
Confidence 7888999999999999864
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00047 Score=62.34 Aligned_cols=86 Identities=9% Similarity=0.037 Sum_probs=54.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++++|+|| |++|++++..|.+.|. .+|++++|.....+..+.+.+.+.. ....+.+...|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~l~~------------~~~~~~~~~~d~~ 188 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEKIKQ------------EVPECIVNVYDLN 188 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHHHhh------------cCCCceeEEechh
Confidence 45789999999 8999999999999984 4688888874211111222222110 1123444556776
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+.. .+...+..+|+|||+-..
T Consensus 189 ~~~------~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 189 DTE------KLKAEIASSDILVNATLV 209 (289)
T ss_pred hhh------HHHhhhccCCEEEEeCCC
Confidence 543 455666778999997754
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00051 Score=58.20 Aligned_cols=83 Identities=24% Similarity=0.274 Sum_probs=54.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++++++|+||+|.+|+.+++.|++.|.+ |+++.|... ..+.+.+.+.. . .......+|..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~---V~l~~R~~~---~~~~l~~~l~~-----------~--~~~~~~~~~~~ 86 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGAR---VVLVGRDLE---RAQKAADSLRA-----------R--FGEGVGAVETS 86 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHHh-----------h--cCCcEEEeeCC
Confidence 45789999999999999999999988754 888888632 11122111110 0 12334445555
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
+.. .+...+.++|+||++....
T Consensus 87 ~~~------~~~~~~~~~diVi~at~~g 108 (194)
T cd01078 87 DDA------ARAAAIKGADVVFAAGAAG 108 (194)
T ss_pred CHH------HHHHHHhcCCEEEECCCCC
Confidence 433 5667778999999977643
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00033 Score=65.81 Aligned_cols=78 Identities=27% Similarity=0.367 Sum_probs=54.6
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+|.|+ |++|+.+++.|++.+ ...+|++.+|+.. ++++.... ....++.++..|+.+..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~------~~~~~~~~-----------~~~~~~~~~~~d~~~~~-- 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE------KAERLAEK-----------LLGDRVEAVQVDVNDPE-- 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH------HHHHHHT-------------TTTTEEEEE--TTTHH--
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH------HHHHHHhh-----------ccccceeEEEEecCCHH--
Confidence 789999 999999999999984 3346899998732 22222110 02368999999999876
Q ss_pred CCHHHHHHHhcCccEEEEcCccc
Q psy14522 212 LSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 212 l~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.+.+++++.|+|||+++..
T Consensus 60 ----~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 60 ----SLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp ----HHHHHHTTSSEEEE-SSGG
T ss_pred ----HHHHHHhcCCEEEECCccc
Confidence 7999999999999999875
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1178|consensus | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0007 Score=70.10 Aligned_cols=180 Identities=21% Similarity=0.203 Sum_probs=113.6
Q ss_pred cccccCCeEEEecCcccchHHHHHHHHh------------hCCChHHhHH-hhccCCCCchh-------------hhhh-
Q psy14522 66 QEFYRGASVFVTGGTGFMGKTLTEKLLR------------ACPHLERVYL-LVRPKKGKTVS-------------ERLD- 118 (298)
Q Consensus 66 ~~~~~~~~ff~~Gg~sl~~~~l~~~ll~------------~~ptv~~l~~-~i~~~~~~~~~-------------~rl~- 118 (298)
....++++||.+||||+.+.++.-.+.. ..+++..++. .++.+...... .|.+
T Consensus 614 ~~~s~d~~fF~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1032)
T KOG1178|consen 614 AIVSPDSSFFQLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIRIKSQEKSSSKLNHKIELKNLKDRTQL 693 (1032)
T ss_pred cccCCCcchhhhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhhhhhhccchhhhhhhhhhccccchhhH
Confidence 3578899999999999999876554432 2456666653 23332211110 0000
Q ss_pred -----hhhhhhh-------hhcCce--eeecCCCCCCchhHHHHHHHhCC--CcceEEEecCCCCccchhHHHHHHHHHH
Q psy14522 119 -----ELFEDRE-------FYRGAS--VFVTGGTGFMGKTLTEKLLRACP--HLERVYLLVRPKKGKTVSERLDELFEDR 182 (298)
Q Consensus 119 -----~~~~~~~-------~~~~k~--vLVTGatG~iG~~l~~~Ll~~g~--~v~~V~~l~R~~~~~~~~~rl~~~~~~~ 182 (298)
.....+. ...+++ +++||.+|++|......+..... ....+.++.|..+..+...+.......
T Consensus 694 ~~~i~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~l~~~~~~~~~~~~i~~~~~~~a~~e~a~~~~~~~~i~~- 772 (1032)
T KOG1178|consen 694 SDTIPKSSPLPLNLSIEVKKSELLTAYVFLTGYTGYLGRRKLSNLVKLSNFFYIILVFALVRASSEEASGGRLQDAIQI- 772 (1032)
T ss_pred hhhccccccCCCCCccccccccccccceeeeeccceehhhhhhhhhhhhhhhheeeeEEEeccCCchhhccchhchhhh-
Confidence 0001110 112233 79999999999999888776621 123467777876665655565554432
Q ss_pred HHhhhhhcCccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc
Q psy14522 183 LFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG 250 (298)
Q Consensus 183 ~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g 250 (298)
+..+.++..-++..+.+++....++++...+..+...++.++|+++.++...++......|+.+
T Consensus 773 ----~~~~~e~~~i~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~ 836 (1032)
T KOG1178|consen 773 ----YGVLNEELLINIIVHLIDLSKSLFGLEDTLWNKLQEPVSIVIHNGALVHEVLRYTELRYPNVIG 836 (1032)
T ss_pred ----hhhccccccceeeeehhhhhhhhhcccchhhhccccCcceecccccceeeechhhccCCceeee
Confidence 1112233334667778888888888988889988889999999999888777776666666665
|
|
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0031 Score=57.54 Aligned_cols=90 Identities=18% Similarity=0.269 Sum_probs=60.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
-++|-||+||-|.+++++++..+ .+--.+-+..|+. ++|++.++.-.. .........+ ++.+|.+++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~------~KL~~vL~~~~~----k~~~~ls~~~-i~i~D~~n~~ 75 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE------KKLQEVLEKVGE----KTGTDLSSSV-ILIADSANEA 75 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH------HHHHHHHHHHhh----ccCCCcccce-EEEecCCCHH
Confidence 47899999999999999999832 1111255556653 344444432110 0111222344 8889999987
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCcc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFD 237 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~ 237 (298)
.+.++++.+.+|+||+|+..+.
T Consensus 76 ------Sl~emak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 76 ------SLDEMAKQARVIVNCVGPYRFH 97 (423)
T ss_pred ------HHHHHHhhhEEEEeccccceec
Confidence 8999999999999999987543
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=58.87 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=27.6
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcc-----eEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLE-----RVYLLVRPK 166 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~-----~V~~l~R~~ 166 (298)
+|.|+||+|++|+.++..|+..+. +. .+.++++..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCC
Confidence 689999999999999998887652 22 377777754
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.001 Score=57.99 Aligned_cols=30 Identities=37% Similarity=0.492 Sum_probs=23.8
Q ss_pred eeecC-CCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 132 VFVTG-GTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 132 vLVTG-atG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
-.||. ++|+||+++++.|+++|++ |+++.|
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~---Vvlv~~ 47 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHE---VTLVTT 47 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCE---EEEEcC
Confidence 35554 5889999999999999987 666654
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0018 Score=55.70 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=97.8
Q ss_pred EecCcccchHHHHHHHHhhCCChHHhHHhhcc-CCCCc-hhhhhhhhhhhhhhhcCceeeecCCCCCCchhHHHHHHHhC
Q psy14522 76 VTGGTGFMGKTLTEKLLRACPHLERVYLLVRP-KKGKT-VSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 76 ~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~-~~~~~-~~~rl~~~~~~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
..||.||++..+...++..- +.+... .++.+ .+..++...++ .-...++.|+.||.|+++++.-...+
T Consensus 7 vfgg~gflg~~ic~~a~~sg------y~vvsvsrsgas~~snkid~~~dv----e~e~tlvlggnpfsgs~vlk~A~~vv 76 (283)
T KOG4288|consen 7 VFGGNGFLGKRICQEAVTSG------YQVVSVSRSGASPHSNKIDDKQDV----EVEWTLVLGGNPFSGSEVLKNATNVV 76 (283)
T ss_pred eecccccchhhhhHHHHhcC------ceEEEeccccCCCcCCCCcchhhh----hHHHHhhhcCCCcchHHHHHHHHhhc
Confidence 46999999998766655431 111111 12222 12233332222 12457899999999999999999997
Q ss_pred CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 154 PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 154 ~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
++ |-.+.|+.... + ...+...+.++.+|.-..+ -+.....++..++-+++.
T Consensus 77 ~s---vgilsen~~k~-----~---------------l~sw~~~vswh~gnsfssn------~~k~~l~g~t~v~e~~gg 127 (283)
T KOG4288|consen 77 HS---VGILSENENKQ-----T---------------LSSWPTYVSWHRGNSFSSN------PNKLKLSGPTFVYEMMGG 127 (283)
T ss_pred ee---eeEeecccCcc-----h---------------hhCCCcccchhhccccccC------cchhhhcCCcccHHHhcC
Confidence 76 77787764321 1 1234567888888876544 244455677777777775
Q ss_pred cCccccHHHH-hhccccc----------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 234 VRFDENIKVA-IAINIFG----------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 234 ~~~~~~~~~~-~~~Nv~g----------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
......+..+ -..|+.. +|+|||...... .|.-+. +|-..|..+|.-|..
T Consensus 128 fgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~-----------~~~i~r-GY~~gKR~AE~Ell~ 188 (283)
T KOG4288|consen 128 FGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGL-----------PPLIPR-GYIEGKREAEAELLK 188 (283)
T ss_pred ccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCC-----------CCccch-hhhccchHHHHHHHH
Confidence 4322111111 0112211 999999752211 122233 788889999887654
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0021 Score=60.40 Aligned_cols=75 Identities=24% Similarity=0.337 Sum_probs=51.1
Q ss_pred hcCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhc
Q psy14522 127 YRGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190 (298)
Q Consensus 127 ~~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~ 190 (298)
+.+++|+|||| +|.+|.++++.|..+|.+ |+++.+.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~---V~~~~g~~~~~--------------------- 238 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD---VTLITGPVSLL--------------------- 238 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE---EEEeCCCCccC---------------------
Confidence 67899999998 367999999999999977 77766543210
Q ss_pred CccccCCeEEEecCCCCCCCCCCHHHH-H----HHhcCccEEEEcCcccCc
Q psy14522 191 VPHFRSKISVVTGDVSLPGLGLSAADR-A----VLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 191 ~~~~~~~v~~v~~Dl~~~~~gl~~~~~-~----~l~~~vd~Vih~A~~~~~ 236 (298)
....+ ...|+++.. ++ + ....++|++||+||..++
T Consensus 239 ---~~~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 239 ---TPPGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred ---CCCCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEccccccc
Confidence 00122 335665543 33 3 233568999999998765
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0035 Score=67.72 Aligned_cols=74 Identities=15% Similarity=0.214 Sum_probs=56.5
Q ss_pred hcCCCCchhcccCCCCCCCcccCCCCC-----------------CCCccccccCCeEEEecCcccchHHHHHHH------
Q psy14522 35 AQYPIDPFELLGENSFGKPRVVPPDEV-----------------GSPIQEFYRGASVFVTGGTGFMGKTLTEKL------ 91 (298)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------ 91 (298)
...|.+..+|++.+..+.|........ .+++..+..+++||.+||||+++.++..++
T Consensus 946 ~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~e~~l~~~~~~~l~~~~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~ 1025 (1296)
T PRK10252 946 DQLPLSANGKLDRKALPLPELKAQVPGRAPKTGTETIIAAAFSSLLGCDVVDADADFFALGGHSLLAMKLAAQLSRQFAR 1025 (1296)
T ss_pred cCCCCCCCcChhHHhcCCCcccccccCCCCCCHHHHHHHHHHHHHhCCCCCCCCcCHHHcCCChHHHHHHHHHHHHHhCC
Confidence 345788889999988887764321111 234668899999999999999998887655
Q ss_pred ------HhhCCChHHhHHhhccC
Q psy14522 92 ------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 92 ------l~~~ptv~~l~~~i~~~ 108 (298)
++.+||+++++.++...
T Consensus 1026 ~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 1026 QVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred CCCHHHHhcCCCHHHHHHHHhcc
Confidence 56789999999998764
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0024 Score=53.79 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=45.1
Q ss_pred cCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcC
Q psy14522 128 RGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191 (298)
Q Consensus 128 ~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~ 191 (298)
.+|+||||+| ||-.|.+|++.+..+|++ |+++.....-
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~---V~li~g~~~~----------------------- 55 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE---VTLIHGPSSL----------------------- 55 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E---EEEEE-TTS------------------------
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE---EEEEecCccc-----------------------
Confidence 4677777754 577899999999999987 6666554220
Q ss_pred ccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCcc
Q psy14522 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFD 237 (298)
Q Consensus 192 ~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~ 237 (298)
.....+..+...-...- .+.+...+.+.|++||+|+..+|.
T Consensus 56 -~~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 56 -PPPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp ----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SEE
T ss_pred -cccccceEEEecchhhh----hhhhccccCcceeEEEecchhhee
Confidence 00146666665432211 124445556789999999998765
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.00096 Score=46.08 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=34.5
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhh
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLV 105 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i 105 (298)
.+..++.++++||.+|+||+.+..+...+ ++.+||+..++.++
T Consensus 13 ~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 13 VDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp SSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred cCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 56788999999999999999998876554 45678888887653
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.017 Score=46.06 Aligned_cols=79 Identities=18% Similarity=0.250 Sum_probs=52.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++++++|.|+ |..|+.++..|...| +.+|++++|... ..+.+.+.+. ...+.++..+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g--~~~i~i~nRt~~---ra~~l~~~~~--------------~~~~~~~~~~-- 67 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALG--AKEITIVNRTPE---RAEALAEEFG--------------GVNIEAIPLE-- 67 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTT--SSEEEEEESSHH---HHHHHHHHHT--------------GCSEEEEEGG--
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcC--CCEEEEEECCHH---HHHHHHHHcC--------------ccccceeeHH--
Confidence 57899999997 889999999999997 457999999632 1122222210 1344444332
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~ 236 (298)
++.......|+||++.+....
T Consensus 68 ---------~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 68 ---------DLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp ---------GHCHHHHTESEEEE-SSTTST
T ss_pred ---------HHHHHHhhCCeEEEecCCCCc
Confidence 344556789999999876543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0068 Score=55.69 Aligned_cols=35 Identities=34% Similarity=0.397 Sum_probs=27.0
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcc-----eEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLE-----RVYLLVRPK 166 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~-----~V~~l~R~~ 166 (298)
+|.|+|++|.+|++++..|+..+. +. .++++++.+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~ 40 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPP 40 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCC
Confidence 589999999999999999987642 11 377777754
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=53.87 Aligned_cols=37 Identities=24% Similarity=0.217 Sum_probs=27.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|+|.||+|.+|++++..|.........+.+++|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~ 37 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP 37 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence 5899999999999999998865322234577777753
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0046 Score=54.81 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=29.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
|+|||+||||. |+.+++.|.+.|++ |+...+...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~---v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIE---ILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCe---EEEEEccCC
Confidence 57999999999 99999999999876 787877654
|
This enzyme was found to be a monomer by gel filtration. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0041 Score=54.78 Aligned_cols=84 Identities=26% Similarity=0.364 Sum_probs=52.6
Q ss_pred EecCcccchHHHHHHHHhhCCChHHhHHhhccCCCCchhhhhhhh-h--hhhh----hhcCceeeecCCCCCC----chh
Q psy14522 76 VTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDEL-F--EDRE----FYRGASVFVTGGTGFM----GKT 144 (298)
Q Consensus 76 ~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~~~~~~~~~rl~~~-~--~~~~----~~~~k~vLVTGatG~i----G~~ 144 (298)
.||+|||+|..|+.+|+...+.+ ++++++|.++.....+|+.+. . .++. ....|..+|.|.-.-- ...
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 58999999999999999998877 999999987776777777443 2 1221 2368889999987742 333
Q ss_pred HHHHHHHhCCCcceEEEec
Q psy14522 145 LTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 145 l~~~Ll~~g~~v~~V~~l~ 163 (298)
-...|.+. +..|+...
T Consensus 80 ~~~~L~~~---v~~IiH~A 95 (249)
T PF07993_consen 80 DYQELAEE---VDVIIHCA 95 (249)
T ss_dssp HHHHHHHH-----EEEE--
T ss_pred Hhhccccc---cceeeecc
Confidence 34556565 34455443
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0026 Score=49.66 Aligned_cols=35 Identities=31% Similarity=0.570 Sum_probs=30.2
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+|.|.||||++|+.|++.|.+. ++...+.++.|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5899999999999999999996 7777777777765
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.007 Score=55.87 Aligned_cols=72 Identities=29% Similarity=0.403 Sum_probs=57.5
Q ss_pred CeEEEecCcccchHHHHHHHHhhCCChHHhHHhhccCCCCchhhhhhhhhhh----hhhhcCceeeecCCCCCCchhH
Q psy14522 72 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFED----REFYRGASVFVTGGTGFMGKTL 145 (298)
Q Consensus 72 ~~ff~~Gg~sl~~~~l~~~ll~~~ptv~~l~~~i~~~~~~~~~~rl~~~~~~----~~~~~~k~vLVTGatG~iG~~l 145 (298)
.++|.||+|||+|..|+..++..-+ .++++++|++..+.+.+|+++.... .+....+..+|.|.-+-++..|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL 76 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL 76 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence 3689999999999999999999866 8999999998888788888776542 3456788899999888444333
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.009 Score=71.30 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=58.0
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCC------------------CCCCccccccCCeEEEecCcccchHHHHHHH----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDE------------------VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL---- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l---- 91 (298)
.+..|.++.+|++++..+.|....... ..+++..++.++|||.+||||++++++..++
T Consensus 2063 l~~lP~t~~GKidr~~L~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~g 2142 (3956)
T PRK12467 2063 LARMPLTPNGKLDRKALPAPDASELQQAYVAPQSELEQRLAAIWQDVLGLEQVGLHDNFFELGGDSIISIQVVSRARQAG 2142 (3956)
T ss_pred hhcCCCCCCCCcchhhCCCCccccccccccCCCCHHHHHHHHHHHHHhCCCccCCCCChhhcCCchHHHHHHHHHHHHcC
Confidence 456799999999999998775422111 1345678999999999999999999887654
Q ss_pred -------HhhCCChHHhHHhhcc
Q psy14522 92 -------LRACPHLERVYLLVRP 107 (298)
Q Consensus 92 -------l~~~ptv~~l~~~i~~ 107 (298)
++++|||+.|+.++..
T Consensus 2143 ~~l~~~~if~~~ti~~la~~~~~ 2165 (3956)
T PRK12467 2143 IRFTPKDLFQHQTVQSLAAVAQE 2165 (3956)
T ss_pred CCCCHHHHhcCCCHHHHHHHHhh
Confidence 6789999999987754
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.0056 Score=73.50 Aligned_cols=74 Identities=9% Similarity=0.204 Sum_probs=57.8
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCC-------------------CCCCCccccccCCeEEEecCcccchHHHHHHH---
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPD-------------------EVGSPIQEFYRGASVFVTGGTGFMGKTLTEKL--- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l--- 91 (298)
.+..|.+..+|+|++..+.|..-... ...+++.+++.+|+||.+|||||.++++..++
T Consensus 4206 ~~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~ 4285 (4334)
T PRK05691 4206 LDRLPLNANGKLDRKALPALDIGQLQSQAYLAPRNELEQTLATIWADVLKVERVGVHDNFFELGGHSLLATQIASRVQKA 4285 (4334)
T ss_pred cccCCCCCCCcccHhhcCCCccccccccccCCCCCHHHHHHHHHHHHHhCCCcCCCCCchhhcCCcHHHHHHHHHHHHHH
Confidence 45679999999999999877431110 11345778999999999999999999886554
Q ss_pred ---------HhhCCChHHhHHhhcc
Q psy14522 92 ---------LRACPHLERVYLLVRP 107 (298)
Q Consensus 92 ---------l~~~ptv~~l~~~i~~ 107 (298)
++++||+..++.++..
T Consensus 4286 ~~~~~~~~~~f~~~t~~~la~~~~~ 4310 (4334)
T PRK05691 4286 LQRNVPLRAMFECSTVEELAEYIEG 4310 (4334)
T ss_pred hCCCccHHHHhcCCCHHHHHHHHhh
Confidence 5789999999998875
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.062 Score=46.48 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=57.4
Q ss_pred hhcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 126 FYRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 126 ~~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
++.+|++||+|-. ..|+..|++.|.++|.+ +......+ ...+|+++..+. . ..-.++++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe---L~fTy~~e---~l~krv~~la~~------------~-~s~~v~~c 63 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAE---LAFTYQGE---RLEKRVEELAEE------------L-GSDLVLPC 63 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCE---EEEEeccH---HHHHHHHHHHhh------------c-cCCeEEec
Confidence 4679999999954 48999999999999976 44333321 233444433221 1 23457899
Q ss_pred CCCCCC-CCCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 204 DVSLPG-LGLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 204 Dl~~~~-~gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
|+++.. +.-..+.+.+....+|.++|+-+..+
T Consensus 64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAP 96 (259)
T ss_pred CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence 999865 10011233333346899999999764
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.042 Score=52.66 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=51.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+|+|+|+.+ +|..+++.|++.|++ |++.++.... ...+.+.+ +.. .++.++.+|..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~---V~~~d~~~~~-~~~~~~~~-l~~--------------~~~~~~~~~~~ 62 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAK---VILTDEKEED-QLKEALEE-LGE--------------LGIELVLGEYP 62 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCE---EEEEeCCchH-HHHHHHHH-HHh--------------cCCEEEeCCcc
Confidence 4578999999888 999999999999987 7777775321 11111111 110 24566666665
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
+ ....++|+||++++..
T Consensus 63 ~-----------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 63 E-----------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred h-----------hHhhcCCEEEECCCCC
Confidence 4 2335789999999864
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.018 Score=53.11 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=30.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|+|.||||++|..+++.|.++++.+.++..+.+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 5899999999999999999999876655677776653
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.013 Score=69.90 Aligned_cols=74 Identities=14% Similarity=0.227 Sum_probs=58.2
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCCC-----------------CCCccccccCCeEEEecCcccchHHHHHHH-----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDEV-----------------GSPIQEFYRGASVFVTGGTGFMGKTLTEKL----- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l----- 91 (298)
.+..|.+..+|++++..+.|........ .+++..+..+++||++||||+++++|..++
T Consensus 3572 l~~lP~t~~GKidR~~L~~~~~~~~~~~~~p~~~~e~~l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g 3651 (3956)
T PRK12467 3572 LAAMPLGPNGKVDRKALPDPDAKGSREYVAPRSEVEQQLAAIWADVLGVEQVGVTDNFFELGGDSLLALQVLSRIRQSLG 3651 (3956)
T ss_pred eccCCCCCCCccchhhcCCCCccccccccCCCCHHHHHHHHHHHHHhCCCCCCCCcchhcccchHHHHHHHHHHHHHHhC
Confidence 4556899999999999998765421111 244678999999999999999999887654
Q ss_pred -------HhhCCChHHhHHhhcc
Q psy14522 92 -------LRACPHLERVYLLVRP 107 (298)
Q Consensus 92 -------l~~~ptv~~l~~~i~~ 107 (298)
++++||++.++.++..
T Consensus 3652 ~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3652 LKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred CCCCHHHHHhCCCHHHHHHHHhh
Confidence 6679999999988865
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.015 Score=70.87 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=56.7
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCC------------------CCCCccccccCCeEEEecCcccchHHHHHHH----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDE------------------VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL---- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l---- 91 (298)
.+..|.++.+|++++..+.|....... ..+++..+..+++||.+||||+.+++++.++
T Consensus 3522 ~~~lP~t~~GKvdr~~L~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~g 3601 (5163)
T PRK12316 3522 LERMPLTPNGKLDRKALPRPDAALLQQDYVAPVNELERRLAAIWADVLKLEQVGLTDNFFELGGDSIISLQVVSRARQAG 3601 (5163)
T ss_pred HhhcCCCCCcchhHHhcCCCccccccccccCCCCHHHHHHHHHHHHHhCCCCCCCCCCchhcCCccHHHHHHHHHHHHcC
Confidence 455689999999999988765422111 0234678999999999999999999987765
Q ss_pred -------HhhCCChHHhHHhhcc
Q psy14522 92 -------LRACPHLERVYLLVRP 107 (298)
Q Consensus 92 -------l~~~ptv~~l~~~i~~ 107 (298)
++++||++.|+..++.
T Consensus 3602 ~~~~~~~~f~~~ti~~la~~~~~ 3624 (5163)
T PRK12316 3602 IRFTPKDLFQHQTIQGLARVARV 3624 (5163)
T ss_pred CCCCHHHHhcCCCHHHHHHHHhh
Confidence 5679999999987654
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.037 Score=51.15 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=55.4
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHH---------------HHHHHHHHHHhhhhh
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSER---------------LDELFEDRLFSRLKA 189 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~r---------------l~~~~~~~~~~~l~~ 189 (298)
..+++++|+|.|+ |.+|+++++.|...| |.++.+++++.-......| .+.. . ..+..
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa-~----~~l~~ 91 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAA-K----EHLRK 91 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCcccccccCccccccHHHccCCccHHHHH-H----HHHHH
Confidence 3456789999996 779999999999998 5568888876411110000 0000 0 11111
Q ss_pred cCccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCc
Q psy14522 190 EVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232 (298)
Q Consensus 190 ~~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~ 232 (298)
..+ .-+++.+..|++.. .+..+++++|+||.+..
T Consensus 92 inp--~v~i~~~~~~~~~~-------~~~~~~~~~DlVid~~D 125 (338)
T PRK12475 92 INS--EVEIVPVVTDVTVE-------ELEELVKEVDLIIDATD 125 (338)
T ss_pred HCC--CcEEEEEeccCCHH-------HHHHHhcCCCEEEEcCC
Confidence 111 12455666666432 56777889999998874
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.041 Score=50.87 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=31.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+...+|+|.|+ |++|++++..|...| |.+|.+++++
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 456789999997 999999999999998 5678888875
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.055 Score=50.83 Aligned_cols=36 Identities=19% Similarity=0.445 Sum_probs=29.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..++|.|.||||++|..|++.|..+ +. .+|..+.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEECh
Confidence 4568999999999999999998888 54 457776664
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.061 Score=46.33 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=31.3
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..++..+|+|.| .|.+|++++..|...| +.++++++.+
T Consensus 24 ~~L~~~~V~ViG-~GglGs~ia~~La~~G--vg~i~lvD~D 61 (212)
T PRK08644 24 EKLKKAKVGIAG-AGGLGSNIAVALARSG--VGNLKLVDFD 61 (212)
T ss_pred HHHhCCCEEEEC-cCHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 345678899999 5899999999999998 5678888776
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.015 Score=70.00 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=56.4
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCC------------------CCCCccccccCCeEEEecCcccchHHHHHHH----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDE------------------VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL---- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l---- 91 (298)
.+..|.+..+|++++..+.|....... ..+++.++..++|||.+||||+++++|+.++
T Consensus 2675 v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~~~Ff~lGGdSl~a~~l~~~~~~~g 2754 (4334)
T PRK05691 2675 LDSLPLTANGKLDRRALPAPDPELNRQAYQAPRSELEQQLAQIWREVLNVERVGLGDNFFELGGDSILSIQVVSRARQLG 2754 (4334)
T ss_pred ecccCCCCCCcccHHhhcCccccccccCcCCCCChHHHHHHHHHHHHhCCCccCCCcCHHhcCCchHHHHHHHHHHHHcC
Confidence 345688999999999888764321111 1235678999999999999999999987654
Q ss_pred -------HhhCCChHHhHHhhcc
Q psy14522 92 -------LRACPHLERVYLLVRP 107 (298)
Q Consensus 92 -------l~~~ptv~~l~~~i~~ 107 (298)
++++|||++|+.++..
T Consensus 2755 ~~l~~~~lf~~~ti~~la~~~~~ 2777 (4334)
T PRK05691 2755 IHFSPRDLFQHQTVQTLAAVATH 2777 (4334)
T ss_pred CCCCHHHHhcCCCHHHHHHHHhh
Confidence 6679999999988764
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.09 Score=47.99 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=30.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|+|+||.+|..++..|+..|.. ..|++++|..
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcc
Confidence 57999999999999999999998642 4688888843
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.084 Score=48.04 Aligned_cols=78 Identities=18% Similarity=0.247 Sum_probs=51.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
...++|-|||||.|..++++|..+|.. -.+-.|+. ....++...+. .....+ ++..
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~---~kl~~l~~~LG---------------~~~~~~--p~~~- 61 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSS---AKLDALRASLG---------------PEAAVF--PLGV- 61 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCc---hhhccCCH---HHHHHHHHhcC---------------cccccc--CCCC-
Confidence 456899999999999999999999855 34445542 22223222221 111111 2222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
+..++.++.+.++|+||+|+..
T Consensus 62 -----p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 62 -----PAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred -----HHHHHHHHhcceEEEecccccc
Confidence 3478888899999999999864
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.027 Score=68.83 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=56.9
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCC------------------CCCCccccccCCeEEEecCcccchHHHHHHH----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDE------------------VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL---- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l---- 91 (298)
.+..|.+..+|++++..+.+....... ..+++..++.+++||.+||||+.+++|..++
T Consensus 5038 ~~~lP~t~~GKvdR~~L~~~~~~~~~~~~~~~~~~~e~~l~~i~~~vL~~~~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~ 5117 (5163)
T PRK12316 5038 LARMPLTPNGKLDRKALPQPDASLLQQAYVAPRSELEQQVAAIWAEVLQLERVGLDDNFFELGGHSLLAIQVTSRIQLEL 5117 (5163)
T ss_pred cccCCCCCCcccChhhcCCccccccccccCCCCcHHHHHHHHHHHHHhCCCCCCCCCChhhccchHHHHHHHHHHHHHHc
Confidence 445688999999998887764321111 0234678999999999999999999887655
Q ss_pred --------HhhCCChHHhHHhhccC
Q psy14522 92 --------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 92 --------l~~~ptv~~l~~~i~~~ 108 (298)
++++||+++|+.++...
T Consensus 5118 g~~l~~~~lf~~pti~~la~~~~~~ 5142 (5163)
T PRK12316 5118 GLELPLRELFQTPTLAAFVELAAAA 5142 (5163)
T ss_pred CCCCCHHHHHcCCCHHHHHHHHHhc
Confidence 56799999999888653
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.26 Score=39.49 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=30.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|.|++|.+|++++..|...+. +.+++++++..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~ 36 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINE 36 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCc
Confidence 5799999999999999999999853 57799888864
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.11 Score=47.64 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=29.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcc-----eEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLE-----RVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~-----~V~~l~R~~ 166 (298)
.++|.|+|++|++|+.++..|+..|. .. .+.+++...
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~ 43 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQ 43 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCC
Confidence 46899999999999999999987753 23 588887753
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.16 Score=48.55 Aligned_cols=73 Identities=22% Similarity=0.313 Sum_probs=49.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|.|+ |.+|.++++.|.+.|++ |+++.++.. +...... ...+.++.||.++..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~---v~vid~~~~------~~~~~~~--------------~~~~~~~~gd~~~~~ 56 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENND---VTVIDTDEE------RLRRLQD--------------RLDVRTVVGNGSSPD 56 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCc---EEEEECCHH------HHHHHHh--------------hcCEEEEEeCCCCHH
Confidence 57899997 99999999999998877 777877532 1111110 025677888877654
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+..+ ++++|.||-+..
T Consensus 57 ------~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 57 ------VLREAGAEDADLLIAVTD 74 (453)
T ss_pred ------HHHHcCCCcCCEEEEecC
Confidence 55555 567777776654
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.1 Score=48.45 Aligned_cols=34 Identities=32% Similarity=0.594 Sum_probs=25.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
++|.|.||||++|..+++.|.+. +.+..+.++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s 34 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSS 34 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEecc
Confidence 47999999999999999999876 55333324343
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.097 Score=44.68 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=31.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.| .|.+|+++++.|...| +.++.+++++
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCC
Confidence 45678999999 6899999999999998 5678888876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.16 Score=46.52 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=27.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
..+|.|.||+|+.|..|++.|..+ +++. +++...
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss 35 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISS 35 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeec
Confidence 368999999999999999999998 7766 554443
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.088 Score=48.70 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=28.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+|.|.||||++|..|++.|.++++.+.++..+.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~ 35 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASD 35 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecc
Confidence 47899999999999999998877665556555554
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.15 Score=47.83 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=31.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.|+ |.+|++++..|...| |.++.++++.
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 467888999975 889999999999998 5678888876
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.3 Score=46.68 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=30.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+|+|+|||+.| +|...++.|++.|.. |++.++..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~---V~~~d~~~ 38 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGAN---VTVNDGKP 38 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCE---EEEEcCCC
Confidence 578999999987 999999999999876 77777653
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.24 Score=45.86 Aligned_cols=33 Identities=24% Similarity=0.474 Sum_probs=25.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
++|.|.||||++|..+++.|.+. +.+ ++.++.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 68999999999999999999876 443 3544444
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.52 Score=40.17 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=31.7
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+..++|+|.|+ |.+|+.++..|...| +.+|++++++
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D 54 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFD 54 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCC
Confidence 3456789999996 789999999999998 4568888877
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.41 Score=42.17 Aligned_cols=39 Identities=26% Similarity=0.238 Sum_probs=32.5
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|+|.|+ |.+|+.+++.|...| |.++.+++...
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ 66 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDT 66 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCE
Confidence 3456789999997 999999999999998 66788887653
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.17 Score=43.96 Aligned_cols=37 Identities=27% Similarity=0.325 Sum_probs=30.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.| .|.+|+++++.|...| +.++++++..
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D 54 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDD 54 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCC
Confidence 45678999999 6899999999999998 5677777654
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.31 Score=38.76 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=46.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+++++++.|. | -|.+++..|.+.|++ |++++.++.. .+.... ..+.++.+|+.+
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~---ViaIDi~~~a------V~~a~~---------------~~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFD---VIVIDINEKA------VEKAKK---------------LGLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCE---EEEEECCHHH------HHHHHH---------------hCCeEEECcCCC
Confidence 4578999984 5 788899999999877 9999887431 111111 357889999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHG 230 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~ 230 (298)
+++ .+-+++|.|+-.
T Consensus 70 p~~--------~~y~~a~liysi 84 (134)
T PRK04148 70 PNL--------EIYKNAKLIYSI 84 (134)
T ss_pred CCH--------HHHhcCCEEEEe
Confidence 874 223455666543
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.48 Score=49.97 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=31.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..|..+|+||-|+.|..|+..|+++|. .+++...|+.
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsG 1803 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSG 1803 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCc--eEEEEecccc
Confidence 468899999999999999999999984 4577777764
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.21 Score=45.91 Aligned_cols=37 Identities=27% Similarity=0.291 Sum_probs=29.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcc-----eEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLE-----RVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~-----~V~~l~R~~ 166 (298)
.-+|.|+|++|++|++++..|+..+. .. .+++++...
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPP 44 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCC
Confidence 35799999999999999999988753 24 588887754
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.4 Score=41.67 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=52.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++|.| .|-+|+.+++.|.+.|++ |..+.+... +..+... .......+.+|-+++.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~---Vv~Id~d~~------~~~~~~~-------------~~~~~~~v~gd~t~~~ 57 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHN---VVLIDRDEE------RVEEFLA-------------DELDTHVVIGDATDED 57 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCc---eEEEEcCHH------HHHHHhh-------------hhcceEEEEecCCCHH
Confidence 4677777 588999999999999988 888877632 2222111 0135678889988876
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
.+.++ +.++|+++-.-+.
T Consensus 58 ------~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 58 ------VLEEAGIDDADAVVAATGN 76 (225)
T ss_pred ------HHHhcCCCcCCEEEEeeCC
Confidence 56666 5678888866553
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.22 Score=46.36 Aligned_cols=38 Identities=21% Similarity=0.160 Sum_probs=31.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++.+|+|.|+ |.+|++++..|...| |.++.+++...
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ 62 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDT 62 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCE
Confidence 456789999986 899999999999998 66788887763
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.28 Score=40.62 Aligned_cols=37 Identities=27% Similarity=0.321 Sum_probs=30.5
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.|+.+.+|..+++.|.+.|.+ |++..|.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~---V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNAT---VTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCE---EEEEECC
Confidence 367999999999777899999999998754 7777764
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.31 Score=44.85 Aligned_cols=37 Identities=30% Similarity=0.316 Sum_probs=29.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcc-----eEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLE-----RVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~-----~V~~l~R~~ 166 (298)
.++|.|+|++|.+|+.++..|+..+. .. .+.++++.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPP 45 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCC
Confidence 46899999999999999999887653 23 577777753
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.2 Score=48.29 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=28.4
Q ss_pred hhcCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 126 FYRGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 126 ~~~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
.+.+|+||||+| ||-.|.+|++.+..+|.+ |+++.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~---VtlI~ 303 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE---VTLIS 303 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc---EEEEe
Confidence 378999999976 456899999999999988 55553
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.24 Score=44.66 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=30.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+|+|+|.|++|.+|+.++..|++.|. +|+++.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence 5789999999999999999999998874 4776655
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.46 Score=42.95 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=30.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+++++|.|+ |+.+++++..|...| +.+|++++|...
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 36789999996 666999999998887 457999999743
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.29 Score=43.39 Aligned_cols=36 Identities=39% Similarity=0.489 Sum_probs=26.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|+|++|.+|+.+++.+.+. +++.-|.++++..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 57999999999999999888765 4444455555543
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.5 Score=42.56 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=54.9
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHH----HHH----HHHHHhhhhhcCccccC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD----ELF----EDRLFSRLKAEVPHFRS 196 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~----~~~~~~~l~~~~~~~~~ 196 (298)
..+++.+|+|.| .|.+|+.++..|...| |.++.+++.+.-...-..|-. +.. ....-..+....+. -
T Consensus 23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~--v 97 (287)
T PRK08223 23 QRLRNSRVAIAG-LGGVGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPE--L 97 (287)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCC--C
Confidence 345678999998 4889999999999998 667887776532211111100 000 00001112211121 2
Q ss_pred CeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCc
Q psy14522 197 KISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232 (298)
Q Consensus 197 ~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~ 232 (298)
+++.+...++.. ...++++++|+||.+.-
T Consensus 98 ~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~D 126 (287)
T PRK08223 98 EIRAFPEGIGKE-------NADAFLDGVDVYVDGLD 126 (287)
T ss_pred EEEEEecccCcc-------CHHHHHhCCCEEEECCC
Confidence 455555555543 46677889999996653
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.3 Score=45.33 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=28.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
...+|.|.||||++|..|++.|.++++.+..+..+.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~la 41 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLA 41 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEE
Confidence 356899999999999999999988665444554443
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.39 Score=50.64 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=53.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcc------------eEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCcccc
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLE------------RVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFR 195 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~------------~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~ 195 (298)
+.++|+|.|+ |++|+..++.|.+. +++. .|.+.++... ..+++.+. .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~~----------------~ 626 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLK---DAKETVEG----------------I 626 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHH---HHHHHHHh----------------c
Confidence 3678999996 99999999999876 3322 3555555421 11121111 1
Q ss_pred CCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 196 SKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
.++..+..|+.+.+ ++..+++++|+||.+...
T Consensus 627 ~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 627 ENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred CCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence 35677888888765 677777889999999875
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.83 Score=38.84 Aligned_cols=37 Identities=19% Similarity=0.406 Sum_probs=30.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++.+|+|.|+.| +|+++++.|+..| |.++++++..
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d 52 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHR 52 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECC
Confidence 35578899999766 9999999999998 6678888765
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.44 Score=42.90 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=30.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
.+.+++|+|.|.++.+|..++..|...|.. |+++.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gat---Vtv~~s 190 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNAS---VTILHS 190 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 367999999999999999999999988755 666554
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.35 Score=40.25 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=27.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+|+|.| .|.+|+++++.|...| +.++++++.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~G--vg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSG--VGNLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcC--CCeEEEEeCCE
Confidence 478888 5899999999999998 55688887764
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.4 Score=39.97 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=31.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+++|.|.| .|.||+.+++.|..-|.+ |+..+|...
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~---V~~~d~~~~ 70 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMR---VIGYDRSPK 70 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT-E---EEEEESSCH
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCce---eEEecccCC
Confidence 35789999998 599999999999988765 898988754
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.46 Score=38.15 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=30.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++++|+|+ |.+|..+++.|.+.| ...|++.+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 45788999997 999999999999885 24588888863
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.19 Score=46.19 Aligned_cols=102 Identities=19% Similarity=0.258 Sum_probs=56.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+.+|||+||+|.+|+..++-....|.. ++....++. +.+ ..+. . ..-..+ |..+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~---~v~~~~s~~------k~~-~~~~------------l-GAd~vi--~y~~ 196 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGAT---VVAVVSSSE------KLE-LLKE------------L-GADHVI--NYRE 196 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCc---EEEEecCHH------HHH-HHHh------------c-CCCEEE--cCCc
Confidence 3889999999999999888877777643 444443321 111 1110 0 010111 2222
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHHhhccccceEEEEeCCcc
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVAIAINIFGSFVHVSTAYT 260 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~~~~Nv~g~~v~iSS~~~ 260 (298)
.++ .+...++.. ++|+|+...|...+......+ .. .|+++.+....+
T Consensus 197 ~~~---~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l-~~--~G~lv~ig~~~g 245 (326)
T COG0604 197 EDF---VEQVRELTGGKGVDVVLDTVGGDTFAASLAAL-AP--GGRLVSIGALSG 245 (326)
T ss_pred ccH---HHHHHHHcCCCCceEEEECCCHHHHHHHHHHh-cc--CCEEEEEecCCC
Confidence 221 224555554 599999999865444433322 22 258888877653
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.1 Score=52.84 Aligned_cols=42 Identities=12% Similarity=-0.006 Sum_probs=35.7
Q ss_pred cccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 66 QEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 66 ~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
..+.++++||++|+||+++..+..++ ++++||+..++.++..
T Consensus 564 ~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~ 617 (705)
T PRK06060 564 WSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEA 617 (705)
T ss_pred hhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHH
Confidence 35889999999999999999987765 5679999999987764
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.45 Score=42.95 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=31.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+++++|.|. |.+|..+++.|...|.+ |++..|..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~---V~v~~R~~ 184 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGAR---VFVGARSS 184 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 356899999997 88999999999998854 88888863
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.56 Score=42.81 Aligned_cols=35 Identities=23% Similarity=0.161 Sum_probs=28.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
++|.|+|++|.+|++++..|+..+. +.++.+++..
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC
Confidence 4799999999999999999887753 3567877765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.74 Score=39.28 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=30.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.|| |-+|...++.|++.|.+ |+++.+.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~---V~VIs~~ 42 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAH---IVVISPE 42 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEcCC
Confidence 367899999997 99999999999999866 7777653
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.67 Score=41.70 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|.|+ |..|+.++..|.+.| +.+|++++|..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCH
Confidence 35788999986 889999999999987 45799999973
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.44 Score=41.54 Aligned_cols=38 Identities=26% Similarity=0.318 Sum_probs=31.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+.+|+|.| .|.+|++++..|...| |.++++++...
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~~G--vg~i~lvD~D~ 61 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAAAG--VGRILLIDEQT 61 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCc
Confidence 45678899998 5889999999999998 66788887653
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.31 Score=43.98 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+.+++|+|++|.+|..+++.+...|.+ |+++.+..
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~---v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALGAR---VIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCe---EEEEeCCH
Confidence 35778999999999999999999888765 78777653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >KOG1494|consensus | Back alignment and domain information |
|---|
Probab=90.68 E-value=1.1 Score=40.07 Aligned_cols=89 Identities=25% Similarity=0.247 Sum_probs=56.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++.+|.|.||.|+||+-|.-.| +..+.|....+.+-... .-+..|++.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~-------------------------------~GVaaDlSH 74 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANT-------------------------------PGVAADLSH 74 (345)
T ss_pred CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccC-------------------------------Ccccccccc
Confidence 4568999999999999875544 45577666555443211 111222221
Q ss_pred -----CCCCCC-HHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccc
Q psy14522 208 -----PGLGLS-AADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINI 248 (298)
Q Consensus 208 -----~~~gl~-~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv 248 (298)
.-.|.. .+.++..+.+.|+|+--||... .....++++++|.
T Consensus 75 I~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NA 122 (345)
T KOG1494|consen 75 INTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINA 122 (345)
T ss_pred cCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcch
Confidence 112222 4578889999999999999653 4456667777764
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=90.60 E-value=0.44 Score=44.26 Aligned_cols=28 Identities=32% Similarity=0.468 Sum_probs=23.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
...++.|||.||+|.+|++.++-....|
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~ 182 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG 182 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence 3467899999999999998888776665
|
|
| >KOG0023|consensus | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.85 Score=41.53 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=56.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc-cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG-KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
..++++-|+|+.| ||.-=++.-.+-|.+ |++++++... +++.++| ..+.+..-.
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~r---V~vis~~~~kkeea~~~L---------------------GAd~fv~~~ 234 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMR---VTVISTSSKKKEEAIKSL---------------------GADVFVDST 234 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcE---EEEEeCCchhHHHHHHhc---------------------CcceeEEec
Confidence 3689999999988 997556655566665 9999988532 2222111 122222222
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccc--CccccHHHHhhccccceEEEEeC
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATV--RFDENIKVAIAINIFGSFVHVST 257 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~--~~~~~~~~~~~~Nv~g~~v~iSS 257 (298)
.+++ ..+.+.+..|.++|.+... ....++-.+++.| |++|+++-
T Consensus 235 ~d~d------~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~--Gt~V~vg~ 280 (360)
T KOG0023|consen 235 EDPD------IMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVN--GTLVLVGL 280 (360)
T ss_pred CCHH------HHHHHHHhhcCcceeeeeccccchHHHHHHhhcC--CEEEEEeC
Confidence 2444 6777777778888877633 1223333344433 36666654
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=90.41 E-value=0.47 Score=44.46 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=30.9
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++.+|+|.|+ |.+|++++..|...| |.++++++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~G--vg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAG--VGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEeCC
Confidence 456788999985 889999999999998 5678888776
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.34 E-value=0.28 Score=45.33 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=28.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
.+|.|+||||++|..+++.|.++++.+.++..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 58999999999999999999976665555555543
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=90.21 E-value=1.2 Score=39.68 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=31.3
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+.+|+|.| .|.+|+++++.|+..| |.++++++..
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~G--Vg~itLiD~D 63 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTG--IGAITLIDMD 63 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCC
Confidence 345678899998 5889999999999998 5678887765
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.99 E-value=1.2 Score=40.90 Aligned_cols=86 Identities=20% Similarity=0.267 Sum_probs=55.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccch-------hHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTV-------SERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~-------~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|++-|.| .|.||+++++.+..-|.+ |++.++-...... ...+++.+.. ..+.
T Consensus 140 l~gkTvGIiG-~G~IG~~va~~l~afgm~---v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~--------------sDiv 201 (324)
T COG0111 140 LAGKTVGIIG-LGRIGRAVAKRLKAFGMK---VIGYDPYSPRERAGVDGVVGVDSLDELLAE--------------ADIL 201 (324)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHhCCCe---EEEECCCCchhhhccccceecccHHHHHhh--------------CCEE
Confidence 5689999999 699999999999999876 8888883222111 1224443332 4666
Q ss_pred EEecCCCCCCCCCC-HHHHHHHhcCccEEEEcC
Q psy14522 200 VVTGDVSLPGLGLS-AADRAVLRRNVTVVFHGA 231 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~-~~~~~~l~~~vd~Vih~A 231 (298)
.+..-+++..-|+- .+.+..+..+. ++||+|
T Consensus 202 ~lh~PlT~eT~g~i~~~~~a~MK~ga-ilIN~a 233 (324)
T COG0111 202 TLHLPLTPETRGLINAEELAKMKPGA-ILINAA 233 (324)
T ss_pred EEcCCCCcchhcccCHHHHhhCCCCe-EEEECC
Confidence 66777776655543 44444443444 666665
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.93 Score=34.43 Aligned_cols=70 Identities=24% Similarity=0.321 Sum_probs=45.8
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|+|.|. |-+|..+++.|.+.+.+ |+++.+++. +.+.... ..+.++.||.+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~---vvvid~d~~------~~~~~~~---------------~~~~~i~gd~~~~~-- 53 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGID---VVVIDRDPE------RVEELRE---------------EGVEVIYGDATDPE-- 53 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSE---EEEEESSHH------HHHHHHH---------------TTSEEEES-TTSHH--
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCE---EEEEECCcH------HHHHHHh---------------cccccccccchhhh--
Confidence 567775 68999999999997534 777777532 2222211 45789999999876
Q ss_pred CCHHHHHHH-hcCccEEEEcCc
Q psy14522 212 LSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 212 l~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+.++ +++++.++-+..
T Consensus 54 ----~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 54 ----VLERAGIEKADAVVILTD 71 (116)
T ss_dssp ----HHHHTTGGCESEEEEESS
T ss_pred ----HHhhcCccccCEEEEccC
Confidence 45554 346787776654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=89.88 E-value=0.78 Score=41.94 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=28.6
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+|.|+|++|.+|++++..|+..+. +..+.++++..
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCC
Confidence 588999999999999999888753 45688888764
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.87 Score=41.02 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|.|+ |+.|++++..|...| +.+|++++|..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCH
Confidence 35689999996 779999999999987 45699999974
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=89.77 E-value=1.1 Score=42.60 Aligned_cols=80 Identities=14% Similarity=0.290 Sum_probs=52.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++|+|.|+ |.+|+.++..|...|. ..|++.+|.... .+.+.+.+ ....++
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~~r---a~~La~~~----------------~~~~~~----- 231 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTIEK---AQKITSAF----------------RNASAH----- 231 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCHHH---HHHHHHHh----------------cCCeEe-----
Confidence 57899999997 9999999999998873 469999986321 11221110 011111
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDEN 239 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~ 239 (298)
..+++...+...|+||++-+...+.-.
T Consensus 232 ------~~~~l~~~l~~aDiVI~aT~a~~~vi~ 258 (414)
T PRK13940 232 ------YLSELPQLIKKADIIIAAVNVLEYIVT 258 (414)
T ss_pred ------cHHHHHHHhccCCEEEECcCCCCeeEC
Confidence 112556667789999999987654433
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=89.53 E-value=1.1 Score=36.78 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=25.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.++.+|+.++..|.++|.. |...
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~at---Vt~~ 66 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGAT---VTIC 66 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-E---EEEE
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCe---EEec
Confidence 67999999999999999999999998644 6554
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=89.41 E-value=0.29 Score=42.24 Aligned_cols=34 Identities=32% Similarity=0.389 Sum_probs=29.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.||+|.+|..++..|.+.|++ |.+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~---V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNK---IIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCE---EEEEEcCH
Confidence 47999999999999999999999866 77777764
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=0.9 Score=41.21 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=31.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+|.|.|.+|.+|..++..|++.|+. |+++.|.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gat---Vtv~~~~ 192 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCS---VTVVHSR 192 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEECCC
Confidence 57999999999999999999999999866 7777554
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.23 E-value=1.5 Score=40.09 Aligned_cols=38 Identities=16% Similarity=0.275 Sum_probs=30.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+++|.|+|+ |.+|+.++..|+..|. +.++.++++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~ 42 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKE 42 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCc
Confidence 3679999998 9999999999988853 356888888543
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.34 Score=44.98 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=27.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+|.|+||||++|+.+++.|.+. +. .++..+.++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~-~el~~~~~s 37 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PW-FEVTALAAS 37 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEcC
Confidence 468999999999999999998876 44 356665444
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=88.72 E-value=2.5 Score=36.93 Aligned_cols=36 Identities=31% Similarity=0.336 Sum_probs=30.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+.+|+|.| .|.+|+++++.|+..| |.++++++..
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCC
Confidence 4577899998 5889999999999998 6678888765
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.67 E-value=1.1 Score=40.37 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=31.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|.|+ |+.|++++..|.+.| +.+|++++|..
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g--~~~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHG--VQKLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 34789999996 889999999999987 45799999863
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=88.55 E-value=1.3 Score=35.25 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=26.6
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+|+|.|+ |.+|+++++.|...| +.++.+++..
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~G--v~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSG--VGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCC--CCEEEEEcCC
Confidence 4788885 999999999999998 4568877765
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=88.50 E-value=1.1 Score=39.22 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=31.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++.+|+|.| .|.+|+.++..|...| |.++++++++.
T Consensus 21 ~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ 58 (240)
T TIGR02355 21 ALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDT 58 (240)
T ss_pred HHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCc
Confidence 45678899998 5889999999999998 66788887763
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.49 E-value=0.44 Score=42.72 Aligned_cols=37 Identities=16% Similarity=0.347 Sum_probs=31.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|+|+ |.+|+.++..|...| +.+|+++.|..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 46789999997 999999999999887 34599999974
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.93 Score=42.52 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=32.0
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++.+|+|.| .|++|++++..|.+.| |.++++++.+
T Consensus 172 ~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D 209 (393)
T PRK06153 172 AKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGD 209 (393)
T ss_pred HHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCC
Confidence 456788999999 5889999999999998 6778887765
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=88.07 E-value=1.5 Score=39.89 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=28.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
++|.|.|+ |.+|+.++..|+..|.. .+|++++|...
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~ 36 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEE 36 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcc
Confidence 36889995 99999999999988731 35888888654
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.79 E-value=0.99 Score=41.40 Aligned_cols=35 Identities=34% Similarity=0.383 Sum_probs=27.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
++|-|.||||.+|+.+++.|.++.+.+..+..+..
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS 36 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLAS 36 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEec
Confidence 57999999999999999999986566655554443
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=87.55 E-value=2.1 Score=39.19 Aligned_cols=92 Identities=15% Similarity=0.167 Sum_probs=50.9
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHH-----H---HHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERL-----D---ELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~---~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+|+|.|+ |++|.++++.|+..| +.++.+++.+.-......|. . +.........+....+ .-++..+.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp--~v~V~~~~ 75 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP--NVKIVAYH 75 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC--CCeEEEEe
Confidence 4788885 999999999999998 56788877653211111000 0 0000000111211111 12455666
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
.++.+.. .....+++.|+||.+.-.
T Consensus 76 ~~i~~~~------~~~~f~~~~DvVv~a~Dn 100 (312)
T cd01489 76 ANIKDPD------FNVEFFKQFDLVFNALDN 100 (312)
T ss_pred ccCCCcc------chHHHHhcCCEEEECCCC
Confidence 6666532 233556789999988654
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=87.18 E-value=1.4 Score=41.67 Aligned_cols=96 Identities=19% Similarity=0.191 Sum_probs=55.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHH--H--HHHH----HHHHHhhhhhcCccccCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSER--L--DELF----EDRLFSRLKAEVPHFRSK 197 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l--~~~~----~~~~~~~l~~~~~~~~~~ 197 (298)
.++..+|+|.| .|.+|++++..|...| |.++.+++.+.-...-..| + .+.. ....-..++...+. -+
T Consensus 35 ~L~~~~VlivG-~GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~--v~ 109 (390)
T PRK07411 35 RLKAASVLCIG-TGGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPY--CQ 109 (390)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCC--Ce
Confidence 45678999998 5789999999999998 6678887765321111111 0 0000 00011112221121 24
Q ss_pred eEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 198 ISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 198 v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
++.+...++.. ....++.++|+||.+...
T Consensus 110 v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d~ 138 (390)
T PRK07411 110 VDLYETRLSSE-------NALDILAPYDVVVDGTDN 138 (390)
T ss_pred EEEEecccCHH-------hHHHHHhCCCEEEECCCC
Confidence 55555555432 456677899999998764
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.15 E-value=1.7 Score=39.13 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=28.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+++|.|.+..+|.-++..|+.+|.. |+.+.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~at---Vtv~h 190 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCT---VTVCH 190 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCe---EEEEE
Confidence 57999999999999999999999888654 66543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=87.14 E-value=1.8 Score=39.61 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=29.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.++|.|.|| |.+|+.++..++..|. ..|.++++...
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~ 40 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKG 40 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCc
Confidence 4578999997 9999999998887762 45888888654
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=87.12 E-value=1.4 Score=44.93 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=56.5
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHH---HH-H---HHHhhhhhcCccccCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDEL---FE-D---RLFSRLKAEVPHFRSK 197 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~---~~-~---~~~~~l~~~~~~~~~~ 197 (298)
..+++.+|+|.|. | +|++++..|...|- +.++++++.+.-......|.... +. . ..-..+....+ .-+
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp--~i~ 177 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP--YLP 177 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC--CCE
Confidence 4567899999999 7 99999999999982 15677777653222222332000 00 0 00011111111 124
Q ss_pred eEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 198 ISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 198 v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
++.+...++ .+.+..+++++|+|+.+.-.
T Consensus 178 v~~~~~~i~-------~~n~~~~l~~~DlVvD~~D~ 206 (722)
T PRK07877 178 VEVFTDGLT-------EDNVDAFLDGLDVVVEECDS 206 (722)
T ss_pred EEEEeccCC-------HHHHHHHhcCCCEEEECCCC
Confidence 555555444 33688888999999998753
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=86.97 E-value=1.8 Score=41.55 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=30.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHh-------CCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRA-------CPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~-------g~~v~~V~~l~R~~~ 167 (298)
+.-+|.|+|++|.+|.+++..|+.. +. +.+++.+++...
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~ 144 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQ 144 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcc
Confidence 3458999999999999999998877 42 235777777654
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=86.96 E-value=1.1 Score=40.66 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=30.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|.|. |.+|..++..|...|.+ |++.+|+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~---V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGAN---VTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 46899999996 88999999999988754 88888863
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=86.67 E-value=3.4 Score=36.26 Aligned_cols=36 Identities=31% Similarity=0.373 Sum_probs=28.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+++.+|+|.| -|++|++.++.|.+.| +.++.+++-.
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsG--ig~itlID~D 63 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSG--IGRITLIDMD 63 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcC--CCeEEEEecc
Confidence 4577899998 4889999999999998 5567666544
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.39 E-value=3.1 Score=37.96 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=28.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|+|+ |++|+.++..|+.++.. ..+++++...
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~ 35 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINE 35 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEccc
Confidence 47999999 99999999999777531 3688888873
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=86.32 E-value=2.8 Score=38.29 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=30.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|++.|.| .|.||+.+++.+..-|.+ |++.+|.
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~---V~~~d~~ 177 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAK---VVYYSTS 177 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhcCCE---EEEECCC
Confidence 36799999999 699999999999877655 8888875
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=86.31 E-value=3.2 Score=41.25 Aligned_cols=90 Identities=17% Similarity=0.110 Sum_probs=57.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+..+|+|.| .|.+|++++..|+..|. .++.+++-+.- .....|+.+..+.. .+..+.+.+-..+.+
T Consensus 127 qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e~A---------~~~n~~v~v~~i~~~ 193 (637)
T TIGR03693 127 SRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAEIA---------EETDDALLVQEIDFA 193 (637)
T ss_pred hhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHHHH---------HHhCCCCceEeccCC
Confidence 4677899999 57779999999999993 45666644332 23344444432210 012345555555554
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
..+ .+...+++.|+|++.+-...
T Consensus 194 ~~~------dl~ev~~~~DiVi~vsDdy~ 216 (637)
T TIGR03693 194 EDQ------HLHEAFEPADWVLYVSDNGD 216 (637)
T ss_pred cch------hHHHhhcCCcEEEEECCCCC
Confidence 443 78888899999999987543
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=86.29 E-value=2 Score=38.72 Aligned_cols=33 Identities=33% Similarity=0.491 Sum_probs=28.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+++|+|.|.++.+|+-++..|+++|.. |+++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~at---Vt~~ 188 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGAT---VTIC 188 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEe
Confidence 57999999999999999999999988654 6543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.6 Score=41.78 Aligned_cols=77 Identities=22% Similarity=0.161 Sum_probs=50.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
...++++|.|+ |.+|..+++.|.+.|++ |+++.+++. +++.... ....+.++.||.+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~---v~vid~~~~------~~~~~~~-------------~~~~~~~i~gd~~ 285 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYS---VKLIERDPE------RAEELAE-------------ELPNTLVLHGDGT 285 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHH-------------HCCCCeEEECCCC
Confidence 34688999998 99999999999988776 777776532 2211111 0135677888888
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 207 LPGLGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
++. .+.++ ++++|.||-+..
T Consensus 286 ~~~------~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 286 DQE------LLEEEGIDEADAFIALTN 306 (453)
T ss_pred CHH------HHHhcCCccCCEEEECCC
Confidence 765 44332 346777775443
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.95 E-value=1.9 Score=38.82 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=31.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+++++|.|| |+.+++++..|++.| +.+|+++.|...
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g--~~~i~V~NRt~~ 161 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAG--AKRITVVNRTRE 161 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence 5789999996 778999999999998 457999999743
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.69 E-value=2.3 Score=38.27 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=29.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+|.|.|.+|.+|.-++..|+++|.. |++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gat---Vtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNAT---VTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCE---EEEE
Confidence 57999999999999999999999999866 6554
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=85.48 E-value=6.5 Score=37.83 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=20.5
Q ss_pred CceeeecCCCCCCchhHHHHHHH
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLR 151 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~ 151 (298)
.-+|+||||+|.||.+|+-.++.
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~ 145 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLAS 145 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhC
Confidence 45799999999999999998876
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.33 E-value=1.9 Score=39.05 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=30.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+|+|.|.++.+|..++..|++.|+. |++..
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~t---Vtv~~ 189 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANAT---VTIAH 189 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCE---EEEEC
Confidence 57999999999999999999999999876 76663
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=84.95 E-value=0.76 Score=45.22 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=30.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+++|+|+ |++|++++..|.+.|.+ |+++.|.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~---V~i~nR~ 411 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGAR---VVIANRT 411 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 45789999998 89999999999999854 8888885
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.89 E-value=1.6 Score=40.50 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=27.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVR 164 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R 164 (298)
+.+|.|.||||++|..+++.|..+ ...+.++..+..
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 468999999999999999988854 334455555543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=84.80 E-value=0.85 Score=38.83 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=29.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+++|.|. |.+|+++++.|.+.|.+ |++.+++
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~---Vvv~D~~ 60 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAK---LIVADIN 60 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 57899999997 78999999999999876 7777665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=84.77 E-value=3.5 Score=29.13 Aligned_cols=33 Identities=36% Similarity=0.550 Sum_probs=26.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+|+|.| .|++|..++..|.+.|.+ |+++.|.+.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~---vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKE---VTLIERSDR 33 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSE---EEEEESSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcE---EEEEeccch
Confidence 366776 599999999999998755 888888754
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=84.76 E-value=0.89 Score=35.49 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=29.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|.|++|.+|+.+++.+.+. +...-+-.++|..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999996 4444566677765
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=84.75 E-value=2.5 Score=39.95 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=30.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++.+|+|.| .|.+|+.++..|...| |.++.+++..
T Consensus 39 ~L~~~~VlviG-~GGlGs~va~~La~~G--vg~i~lvD~D 75 (392)
T PRK07878 39 RLKNARVLVIG-AGGLGSPTLLYLAAAG--VGTLGIVEFD 75 (392)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCC
Confidence 35678899998 5889999999999998 6678877765
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=84.60 E-value=2.5 Score=33.90 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=29.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+|+|+|.|.+.-+|..++..|.++|.. |....+
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~gat---V~~~~~ 60 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGAT---VYSCDW 60 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeCC
Confidence 57999999999999999999999988755 665544
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.58 E-value=2.5 Score=38.05 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=27.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+++++|.|.+..+|.-++..|+.+|.. |.++
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~at---Vtv~ 194 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNAT---VSVC 194 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCE---EEEE
Confidence 57999999999999999999999988644 5544
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=84.48 E-value=3.5 Score=38.03 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=31.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+|+|.|.|- |.||+.+++.|...|.+ |+..+|..
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~---V~~~d~~~ 183 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMR---ILYYSRTR 183 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCE---EEEECCCC
Confidence 357899999995 99999999999988765 88888754
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=84.41 E-value=1.4 Score=41.28 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=28.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..++|+|.|+ |-+|...++.+...|.+ |++++|.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~---V~v~d~~ 199 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGAT---VTILDIN 199 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCe---EEEEECC
Confidence 4567888886 89999999999998854 8888875
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=84.35 E-value=4.3 Score=38.26 Aligned_cols=25 Identities=24% Similarity=0.304 Sum_probs=22.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
.-+|.|+|++|.+|++++..|+..+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~ 68 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGE 68 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcc
Confidence 4589999999999999999998876
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.19 E-value=3.3 Score=37.92 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=29.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|++.|.| .|.||+.+++.|..-|.+ |++..|.
T Consensus 146 l~gktvgIiG-~G~IG~~vA~~l~~fgm~---V~~~~~~ 180 (317)
T PRK06487 146 LEGKTLGLLG-HGELGGAVARLAEAFGMR---VLIGQLP 180 (317)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHhhCCCE---EEEECCC
Confidence 6789999999 599999999999877755 8888775
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.19 E-value=2.8 Score=37.82 Aligned_cols=34 Identities=35% Similarity=0.462 Sum_probs=28.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+++|.|.+..+|.-++..|+++|.. |+++.
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~aT---Vtich 186 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDAT---VTLAH 186 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEeC
Confidence 57999999999999999999999988644 66543
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.10 E-value=2.8 Score=37.68 Aligned_cols=34 Identities=29% Similarity=0.367 Sum_probs=28.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+|+|.|.+..+|+-++..|+++|.. |.++.
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~AT---Vt~ch 189 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCH 189 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEEc
Confidence 57999999999999999999999988644 65543
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=83.69 E-value=3.6 Score=37.35 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=26.2
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+|+|.| .|.+|+++++.|+..| |.++.+++.+
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aG--Vg~ItlvD~D 32 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWG--VRHITFVDSG 32 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCC
Confidence 478887 4889999999999998 6678777654
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.66 E-value=3.1 Score=37.49 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=28.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+++|.|.+..+|+-++..|+++|.. |+.+.
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~at---Vt~ch 190 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNAT---VTLCH 190 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeC
Confidence 57999999999999999999999988643 66543
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.57 E-value=3 Score=37.38 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=28.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+++|.|.+..+|.-++..|+++|.. |+.+.
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~At---Vt~ch 189 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENAT---VTICH 189 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCE---EEEeC
Confidence 57999999999999999999999888643 65543
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=83.45 E-value=2.2 Score=37.79 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=28.4
Q ss_pred eeecCCCCCCchhHHHHHHHhCC-CcceEEEecCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACP-HLERVYLLVRPKK 167 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~-~v~~V~~l~R~~~ 167 (298)
|.|.||.|.+|..++..|+..|. .+.+|+++++...
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~ 37 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEE 37 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcc
Confidence 56899999999999999998861 2356888887653
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=83.44 E-value=3.7 Score=41.67 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=55.4
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHH-H----HHH---HHHHHHhhhhhcCccccC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSER-L----DEL---FEDRLFSRLKAEVPHFRS 196 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~r-l----~~~---~~~~~~~~l~~~~~~~~~ 196 (298)
..+++.+|+|.| .|++|+.++..|...| |.++++++.+.-......| + .+. .-.-.-..+....+ .-
T Consensus 39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~G--VG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP--~~ 113 (679)
T PRK14851 39 ERLAEAKVAIPG-MGGVGGVHLITMVRTG--IGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP--FL 113 (679)
T ss_pred HHHhcCeEEEEC-cCHHHHHHHHHHHHhC--CCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--CC
Confidence 346788999999 6899999999999998 5667777654211111111 0 000 00000011111111 13
Q ss_pred CeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCc
Q psy14522 197 KISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232 (298)
Q Consensus 197 ~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~ 232 (298)
+++.+...++. +.+..+++++|+||.+.-
T Consensus 114 ~I~~~~~~i~~-------~n~~~~l~~~DvVid~~D 142 (679)
T PRK14851 114 EITPFPAGINA-------DNMDAFLDGVDVVLDGLD 142 (679)
T ss_pred eEEEEecCCCh-------HHHHHHHhCCCEEEECCC
Confidence 55566555543 356778889999997764
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=83.26 E-value=5.7 Score=37.85 Aligned_cols=37 Identities=24% Similarity=0.508 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.|+ |.+|..+++.|...| +.+|++.+|..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G--~~~V~v~~rs~ 214 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKG--VGKILIANRTY 214 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCC--CCEEEEEeCCH
Confidence 56789999996 999999999998887 34588888864
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=83.12 E-value=3.8 Score=40.20 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=31.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.|+ |.+|..+++.|...|. .+|+++.|..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence 45789999998 9999999999998873 4588888864
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.00 E-value=3.7 Score=37.58 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=29.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|++.|.| .|.||+.+++.+..-|.+ |++..|.
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~~---V~~~~~~ 179 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALGMK---VLYAEHK 179 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCCCE---EEEECCC
Confidence 36789999999 599999999998777654 7777664
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=82.94 E-value=4.3 Score=37.70 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=31.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|++.|.| .|.||+.+++.|...|.+ |++..|.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~---V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGVK---LLATRRS 191 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCCE---EEEECCC
Confidence 46789999999 599999999999988765 8888875
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.91 E-value=3.5 Score=37.40 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=28.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+|+|.|.+..+|+-++..|+++|.. |+++
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~at---Vtv~ 188 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANAT---VTIA 188 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCE---EEEe
Confidence 57899999999999999999999988644 6544
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=82.89 E-value=1.1 Score=41.45 Aligned_cols=23 Identities=30% Similarity=0.524 Sum_probs=20.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHh
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA 152 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~ 152 (298)
++|.|+|+||++|++|++.|..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~ 23 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH 23 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 36899999999999999988776
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=82.82 E-value=4 Score=31.38 Aligned_cols=22 Identities=32% Similarity=0.585 Sum_probs=19.8
Q ss_pred eeeecCCCCCCchhHHHHHHHh
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRA 152 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~ 152 (298)
++.|.|++|.+|..++..|...
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~ 22 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH 22 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC
Confidence 4789999999999999999885
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=82.80 E-value=1.3 Score=34.85 Aligned_cols=88 Identities=14% Similarity=0.287 Sum_probs=51.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccch-------------hHHHHHHHHHHHHhhhhhcCcccc
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTV-------------SERLDELFEDRLFSRLKAEVPHFR 195 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~-------------~~rl~~~~~~~~~~~l~~~~~~~~ 195 (298)
+++|+|.| .|.+|+.+++.|...| +.++.+++...-...- ..+.+ .... .+....| .
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~G--v~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~-~~~~----~l~~~np--~ 71 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSG--VGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAE-AAKE----RLQEINP--D 71 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHT--TSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHH-HHHH----HHHHHST--T
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhC--CCceeecCCcceeecccccccccccccchhHHHH-HHHH----HHHHhcC--c
Confidence 57899998 5889999999999998 5567777664211000 00111 1111 1111111 1
Q ss_pred CCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 196 SKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
-++..+..++. .+....+++++|+||.+...
T Consensus 72 ~~v~~~~~~~~-------~~~~~~~~~~~d~vi~~~d~ 102 (135)
T PF00899_consen 72 VEVEAIPEKID-------EENIEELLKDYDIVIDCVDS 102 (135)
T ss_dssp SEEEEEESHCS-------HHHHHHHHHTSSEEEEESSS
T ss_pred eeeeeeecccc-------cccccccccCCCEEEEecCC
Confidence 34555655552 23577777899999998764
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=82.63 E-value=4.6 Score=34.50 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=28.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+++|+|.|| |-+|..-++.|++.|.+ |+++...
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~---VtVvsp~ 41 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQ---LRVIAEE 41 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 56889999995 88899999999999866 7776654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=82.60 E-value=0.9 Score=35.78 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=22.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPH 155 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~ 155 (298)
...+|-|.|+ |-+|.+|.+.|.+.|+.
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~ 35 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHE 35 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSE
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCe
Confidence 3568999997 99999999999999876
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.54 E-value=1.4 Score=41.35 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=31.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..++|.|.||+|.+|..++..|.+.|+. |++.+|..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~---V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQ---VRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCe---EEEeCCCc
Confidence 3478999999999999999999999877 88888753
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=82.48 E-value=1.3 Score=37.61 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=30.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++++|+|.|+.| +|+++++.|...| |.++.+++..
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECC
Confidence 35678999998655 9999999999998 6678887765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.27 E-value=1.2 Score=41.79 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=30.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..|+|||||+...+|..+++.|.+.|++ |++++...
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~---Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHT---VILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCc
Confidence 4689999999999999999999999876 77766653
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.24 E-value=3.7 Score=37.15 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=28.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|+++|.|.+..+|.-++..|+++|.. |+++.
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~aT---Vt~ch 191 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENCT---VTTVH 191 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCCE---EEEeC
Confidence 67999999999999999999999988644 66543
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=82.20 E-value=1.8 Score=42.85 Aligned_cols=70 Identities=24% Similarity=0.273 Sum_probs=47.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
.+++|.| .|-+|+++++.|.++|++ |+++++++. +.+...+ .....+.||.++++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~---vvvId~d~~------~~~~~~~---------------~g~~~i~GD~~~~~ 472 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIP---LVVIETSRT------RVDELRE---------------RGIRAVLGNAANEE 472 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHH---------------CCCeEEEcCCCCHH
Confidence 4678887 588999999999999877 777776532 2222211 46789999999876
Q ss_pred CCCCHHHHHHH-hcCccEEEEc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHG 230 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~ 230 (298)
.+++. .+++|.++-+
T Consensus 473 ------~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 473 ------IMQLAHLDCARWLLLT 488 (558)
T ss_pred ------HHHhcCccccCEEEEE
Confidence 45443 2467766543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.08 E-value=5.2 Score=36.39 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=29.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|.|.| .|.||+.+++.|...|.+ |++.+|.
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~afG~~---V~~~~r~ 154 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKAFGMN---IYAYTRS 154 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 36789999998 699999999977766765 8888875
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.86 E-value=4 Score=36.68 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=27.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.+..+|+-++..|+.+|.. |++.
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~at---Vtic 186 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDAT---VTIA 186 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCE---EEEE
Confidence 57899999999999999999999988644 6544
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.80 E-value=4.1 Score=36.64 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=27.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.+..+|+-++..|+++|.. |+++
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~at---Vtic 187 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNENAT---VTIA 187 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEe
Confidence 57999999999999999999999888644 6544
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=81.74 E-value=2 Score=40.05 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=27.3
Q ss_pred ceeeecCCCCCCchhHHHHHH-HhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLL-RACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll-~~g~~v~~V~~l~R~ 165 (298)
++|.|.||||.+|+.+++.|. +....+.+++.+...
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~ 37 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS 37 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch
Confidence 468999999999999999998 444444556666543
|
|
| >KOG2013|consensus | Back alignment and domain information |
|---|
Probab=81.73 E-value=3.5 Score=39.57 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=27.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|||.|| |+||..|++.|+..|.+ .|.+++-.
T Consensus 11 ~~~riLvVGa-GGIGCELLKnLal~gf~--~IhiIDlD 45 (603)
T KOG2013|consen 11 KSGRILVVGA-GGIGCELLKNLALTGFE--EIHIIDLD 45 (603)
T ss_pred ccCeEEEEec-CcccHHHHHHHHHhcCC--eeEEEecc
Confidence 5678999995 88999999999999854 46555443
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.65 E-value=4.1 Score=36.63 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=27.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.+..+|+-++..|++++.. |+.+
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~at---Vt~c 187 (282)
T PRK14166 155 LEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVC 187 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEe
Confidence 57999999999999999999999887644 6544
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=81.57 E-value=1.3 Score=39.42 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=29.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++++|+|+ |.+|+.++..|++.|.+ |+++.|..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~---v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCN---VIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 4789999998 89999999999998754 88888863
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.50 E-value=3.6 Score=37.10 Aligned_cols=29 Identities=28% Similarity=0.510 Sum_probs=26.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPH 155 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~ 155 (298)
+.+|+|+|.|.+..+|..++..|+++|..
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAt 183 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGAS 183 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCE
Confidence 57999999999999999999999988755
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=81.39 E-value=8.1 Score=37.30 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=28.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+++|+|.|+ |.+|..+++.|.+.|.+ |.++.+.
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~---V~~~d~~ 48 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGAR---VTVVDDG 48 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 45788999996 88999999999999876 7777654
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.33 E-value=1.6 Score=40.34 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=28.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+..+|.|.||||++|..+++.|.++.+.+.++..+..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 4678999999999999999999885333455555543
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.31 E-value=2.8 Score=38.45 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=27.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+|+|+|+ |.+|...++.+...|. .+|++.++++
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~--~~Vi~~~~~~ 204 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGA--AEIVCADVSP 204 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeCCH
Confidence 4789999986 9999988877766663 3588777753
|
|
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=81.19 E-value=0.91 Score=31.57 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=28.1
Q ss_pred cccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhc
Q psy14522 68 FYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVR 106 (298)
Q Consensus 68 ~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~ 106 (298)
+..+.+||..|+||+.+..+...+ ++.+|++..++.++.
T Consensus 33 ~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~ 83 (86)
T smart00823 33 IDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLA 83 (86)
T ss_pred CCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHH
Confidence 367889999999999987765443 445677777765543
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.15 E-value=1.2 Score=42.74 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=29.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.||+|.+|..+++.|.+.|++ |++++|+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~---V~v~~r~~ 34 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFE---VIVTGRDP 34 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCE---EEEEECCh
Confidence 47999999999999999999998866 88888864
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=81.12 E-value=5 Score=33.08 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=25.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCc
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHL 156 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v 156 (298)
-.+|+|-|+-|-+|+++++.+..+++-|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV 30 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWV 30 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEE
Confidence 4689999999999999999999998773
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.04 E-value=4.3 Score=36.56 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=28.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.+..+|+-++..|+++|.. |+++
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~at---Vt~c 188 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENAT---VTYC 188 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEE
Confidence 57999999999999999999999988644 6544
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=80.85 E-value=2.1 Score=40.91 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=30.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.|+ |.+|..+++.|...|. .+|++..|..
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 56789999986 9999999999988874 3588888863
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.82 E-value=4.3 Score=37.46 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=29.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG 168 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~ 168 (298)
..+++|+|+|+. .+|..-++.....|.+ |+.++|+.+.
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~---Via~~~~~~K 202 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAE---VIAITRSEEK 202 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCe---EEEEeCChHH
Confidence 358899999976 8887777766667754 9999998653
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=80.58 E-value=2.5 Score=38.49 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=30.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.|+ |.+|..+++.|...| +..|++++|..
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g--~~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKG--VAEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 46899999997 999999999998865 34588888864
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.57 E-value=4.9 Score=36.25 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=27.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
+.+|+++|.|.+..+|+-++..|+++|.. |+++
T Consensus 157 l~GK~vvViGrS~iVGkPla~lL~~~~AT---Vtic 189 (288)
T PRK14171 157 LTGKNVVIIGRSNIVGKPLSALLLKENCS---VTIC 189 (288)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEe
Confidence 57899999999999999999999888644 5543
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=80.35 E-value=3 Score=40.19 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=42.7
Q ss_pred CceeeecCC-CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGG-TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGa-tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+++|++.|| +|-|....++...+.+. ..+|+++-.++. +..-+++.... ..+.++|+++.+|+.+
T Consensus 187 ~~vVldVGAGrGpL~~~al~A~~~~~~-a~~VyAVEkn~~---A~~~l~~~v~~----------n~w~~~V~vi~~d~r~ 252 (448)
T PF05185_consen 187 DKVVLDVGAGRGPLSMFALQAGARAGG-AVKVYAVEKNPN---AVVTLQKRVNA----------NGWGDKVTVIHGDMRE 252 (448)
T ss_dssp T-EEEEES-TTSHHHHHHHHTTHHHCC-ESEEEEEESSTH---HHHHHHHHHHH----------TTTTTTEEEEES-TTT
T ss_pred ceEEEEeCCCccHHHHHHHHHHHHhCC-CeEEEEEcCCHh---HHHHHHHHHHh----------cCCCCeEEEEeCcccC
Confidence 578999995 45555444555555542 357998876542 22222222121 1344789999999988
Q ss_pred CCCCCCHHHHHHHhcCccEEEE
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFH 229 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih 229 (298)
.. +...+|+||.
T Consensus 253 v~----------lpekvDIIVS 264 (448)
T PF05185_consen 253 VE----------LPEKVDIIVS 264 (448)
T ss_dssp SC----------HSS-EEEEEE
T ss_pred CC----------CCCceeEEEE
Confidence 65 2237788775
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=80.31 E-value=8.4 Score=35.19 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=28.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++|.|.|+ |.+|+.++..|+..+. ...+++++...
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-~~el~LiD~~~ 38 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-ADELVLVDVVE 38 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCc
Confidence 458999996 9999999999888753 45688887754
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=80.28 E-value=7.2 Score=36.67 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=29.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+|.|.| .|.||+.+++.|...|.+ |+..++.
T Consensus 114 L~gktvGIIG-~G~IG~~vA~~l~a~G~~---V~~~dp~ 148 (378)
T PRK15438 114 LHDRTVGIVG-VGNVGRRLQARLEALGIK---TLLCDPP 148 (378)
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHHCCCE---EEEECCc
Confidence 5789999999 599999999999998866 7777653
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.16 E-value=4.7 Score=36.22 Aligned_cols=29 Identities=31% Similarity=0.529 Sum_probs=25.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPH 155 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~ 155 (298)
+.+|+++|.|.+..+|.-++..|+++|..
T Consensus 155 l~Gk~vvViGrS~~VG~Pla~lL~~~~At 183 (281)
T PRK14183 155 VKGKDVCVVGASNIVGKPMAALLLNANAT 183 (281)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCE
Confidence 57999999999999999999999988644
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=80.02 E-value=4.3 Score=36.78 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=28.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
++|.|.|+ |.+|..++..++..|. . .|+++++.+.
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~-~-ev~L~D~~~~ 37 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL-G-DVVLFDIVEG 37 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-e-EEEEEECCCc
Confidence 68999998 9999999999988753 1 5888888543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 298 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 1e-05 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 5e-38
Identities = 42/171 (24%), Positives = 63/171 (36%), Gaps = 21/171 (12%)
Query: 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRL 187
+V +TG TGF+G+ L +LLR R+ LVR + + RL++ F+ L
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELL 131
Query: 188 KAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAIN 247
+ ++ VV GD S P LGL L V ++ AA V + N
Sbjct: 132 RHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHE-LFGPN 190
Query: 248 IFG--------------SFVHVSTAYTHCPRQ------EIDEVFYPPPYDY 278
+ G F +VSTA + + D P
Sbjct: 191 VAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTV 241
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 8e-11
Identities = 42/335 (12%), Positives = 89/335 (26%), Gaps = 108/335 (32%)
Query: 29 MSEIVTAQYPIDP------FELLGENSFGKPRVVPPDEVGSP---------IQEFYRGAS 73
MS I P + + + +V V + E +
Sbjct: 95 MSPI--KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 74 VFVTGGTGFMGKT-LTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRGASV 132
V + G G GKT + + S ++ + + F+
Sbjct: 153 VLIDGVLGS-GKTWVALDVCL--------------------SYKVQCKMDFKIFW----- 186
Query: 133 FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVP 192
+ +T+ E L + ++ + R + R+ + + L RL P
Sbjct: 187 -LNLKNCNSPETVLEMLQKLLYQIDPNW-TSRSDHSSNIKLRIHSI-QAEL-RRLLKSKP 242
Query: 193 H--------------------FRSKISVVTGDVSLPGLGLSAADR--AVLRRNVTVVFHG 230
+ KI + T + D A ++++ H
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-------TDFLSAATTTHISLD-HH 294
Query: 231 AATVRFDE---------NIKVA-----------IAINIFGSFVHVSTA------YTHCPR 264
+ T+ DE + + ++I + A + +C +
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 265 -QEIDEVFYP--PPYDYKD-FMELVMSRSDDNLEE 295
I E P +Y+ F L + ++
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT 389
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-09
Identities = 22/167 (13%), Positives = 40/167 (23%), Gaps = 54/167 (32%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V G TG +G + A + L+ RP S ++ L
Sbjct: 16 YAVLGATGLLGHHAARAIRAAG---HDLVLIHRP------SSQIQRLAYLE--------- 57
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRR---NVTVVFHGAATVRFD-ENIKVAIAIN 247
++ D A L R + V A + +A
Sbjct: 58 ------PECRVAEML---------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASA 102
Query: 248 IFGS--------------FVHVST--AYTHCPRQE-IDEVFYPPPYD 277
+ + ++V + A P+ E +
Sbjct: 103 LGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 13/62 (20%), Positives = 18/62 (29%), Gaps = 8/62 (12%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLD-ELFE----DREFYR 128
V G TG +G + A + L+ RP L+ E D
Sbjct: 16 YAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLE 72
Query: 129 GA 130
A
Sbjct: 73 RA 74
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 50/163 (30%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ VTG +G +G L L + + +
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD------------------------ 37
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA--TVRFDENIKVAIAINIF 249
I +T DVS DRAV + ++ +FH A + + +++ +A +N+
Sbjct: 38 ---TGGIKFITLDVSNR----DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMN 90
Query: 250 GS--------------FVHVSTA---YTHCPRQEIDEVFYPPP 275
G+ V ST P+ ++ + P
Sbjct: 91 GTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRP 133
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
+ + G TG++G+ + + L +LLVR + SE+ L +
Sbjct: 6 RILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLLESFK-------- 54
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLR---RNVTVVFHGAATVRFDENIKVAIAIN 247
S ++V G + D A L +NV VV +++ + + + AI
Sbjct: 55 ----ASGANIVHGSID---------DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIK 101
Query: 248 IFGSFVHVSTA-YTHCPRQEIDEVFYPPPYDYK 279
G+ + + + ++ K
Sbjct: 102 EVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVK 134
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 5e-04
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 73 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRGASV 132
+ + G TG++G+ + + L +LLVR + SE+ L + GA++
Sbjct: 6 RILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLLESFKA--SGANI 60
Query: 133 FV 134
Sbjct: 61 VH 62
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 28/134 (20%), Positives = 42/134 (31%), Gaps = 30/134 (22%)
Query: 123 DREFYRGASVFVTGGTGFMGKTLTEKLLR--ACPHLERVYLLVRPKKGKTVSERLDELFE 180
+ F++G VFVTG TGF G L+ L A V
Sbjct: 3 NNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-----TVKGYSLTAPTV----------- 46
Query: 181 DRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA--TVRFD- 237
LF + + GD+ + ++ +VFH AA VR
Sbjct: 47 PSLFETAR-----VADGMQSEIGDIR----DQNKLLESIREFQPEIVFHMAAQPLVRLSY 97
Query: 238 ENIKVAIAINIFGS 251
+ N+ G+
Sbjct: 98 SEPVETYSTNVMGT 111
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 31/127 (24%), Positives = 43/127 (33%), Gaps = 34/127 (26%)
Query: 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR-----PKKGKTVSERLDELFEDR 182
G+ V VTG GF+ + E+L LE Y VR K + +R D + R
Sbjct: 10 EGSLVLVTGANGFVASHVVEQL------LEHGY-KVRGTARSASKLANLQKRWDAKYPGR 62
Query: 183 LFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKV 242
A V D+ G A D + + V H A+ V F
Sbjct: 63 F---ETAVVE-----------DMLKQG----AYDEVI--KGAAGVAHIASVVSFSNKYDE 102
Query: 243 AI--AIN 247
+ AI
Sbjct: 103 VVTPAIG 109
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 32/135 (23%)
Query: 124 REFYRGASVFVTGGTGFMGKTLTEKLLRA----CPHLERVYLLVRPKKGKTVSERLDELF 179
+++G + + G G +G+ LT++L++ +E+ L+
Sbjct: 9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI----------------- 51
Query: 180 EDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA--TVRFD 237
D A + D+S P ++ V+FH AA + +
Sbjct: 52 -DVFQPEAPAGFSG---AVDARAADLSAP-----GEAEKLVEARPDVIFHLAAIVSGEAE 102
Query: 238 ENIKVAIAINIFGSF 252
+ IN+ G+
Sbjct: 103 LDFDKGYRINLDGTR 117
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 5e-04
Identities = 31/152 (20%), Positives = 49/152 (32%), Gaps = 29/152 (19%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ + G G + + LT LL + L R K + E +D
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKTRIPPEIIDH-------------- 51
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA-TVRFDENIKVAIAINIFG 250
+++V+ G P ++AV N VVF GA + +I A++
Sbjct: 52 ----ERVTVIEGSFQNP----GXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIR 101
Query: 251 SFVHVSTA--YTHCPRQEIDEVFYPPPYDYKD 280
+ VS A P F P Y
Sbjct: 102 RVIGVSMAGLSGEFPVALEKWTFDNLPISYVQ 133
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 28/182 (15%), Positives = 46/182 (25%), Gaps = 61/182 (33%)
Query: 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDR 182
+ +V V GG GF+G L ++LL + +V+++ D
Sbjct: 26 NASKLANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVV------------------DN 65
Query: 183 LFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADRAVLRR---NVTVVFHGAA---TVRF 236
L S K VP + + D A+L VFH A
Sbjct: 66 LLSAEKINVPD-HPAVRFSETSI---------TDDALLASLQDEYDYVFHLATYHGNQSS 115
Query: 237 DENIKVAIAINIFGS---------------FVHVSTAYTHCPRQEIDEVFYPPPYDYKDF 281
+ N + V+ + +D
Sbjct: 116 IHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA----------GCSIAEKTFDDAKA 165
Query: 282 ME 283
E
Sbjct: 166 TE 167
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 5e-04
Identities = 18/159 (11%), Positives = 38/159 (23%), Gaps = 36/159 (22%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V + G G + + + +L + L R ++ + +
Sbjct: 26 VLILGAGGQIARHVINQLADKQTI--KQTLFARQP------AKIHKPYPTN--------- 68
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAI---NI 248
++ GDV A +A+ + +V+ D IA
Sbjct: 69 ------SQIIMGDVLNHA----ALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACD 116
Query: 249 FGSFVHVSTAYT----HCPRQEIDEVFYPPPYDYKDFME 283
+ V + E + P
Sbjct: 117 VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA 155
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 9e-04
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 8/70 (11%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V + G TG G+ L +++L P L +V R + RLD + L
Sbjct: 8 VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAE--HPRLDNPVGP--LAELLP-- 60
Query: 192 PHFRSKISVV 201
I
Sbjct: 61 -QLDGSIDTA 69
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.79 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.74 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.74 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.74 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.73 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.73 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.72 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.72 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.71 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.71 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.7 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.7 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.7 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.69 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.68 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.68 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.68 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.68 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.67 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.67 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.67 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.67 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.67 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.67 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.66 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.66 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.66 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.66 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.66 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.66 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.66 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.66 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.65 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.65 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.64 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.64 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.64 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.64 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.64 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.64 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.63 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.63 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.63 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.63 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.62 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.62 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.62 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.62 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.62 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.61 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.61 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.61 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.61 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.61 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.61 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.6 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.6 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.6 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.6 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.59 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.58 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.58 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.57 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.57 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.57 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.57 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.56 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.56 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.55 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.55 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.55 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.55 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.55 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.54 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.54 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.54 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.54 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.54 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.54 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.53 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.53 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.53 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.53 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.53 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.53 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.53 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.53 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.53 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.53 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.53 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.52 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.52 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.52 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.52 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.52 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.52 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.52 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.52 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.52 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.52 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.52 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.52 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.52 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.52 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.52 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.52 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.52 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.52 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.52 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.52 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.52 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.51 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.51 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.51 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.51 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.51 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.51 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.51 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.51 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.51 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.51 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.51 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.51 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.51 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.51 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.51 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.51 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.51 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.51 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.51 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.51 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.5 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.5 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.5 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.5 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.5 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.5 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.5 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.5 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.5 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.5 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.5 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.5 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.5 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.5 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.5 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.5 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.5 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.5 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.5 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.49 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.49 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.49 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.49 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.49 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.49 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.49 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.49 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.49 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.49 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.49 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.49 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.49 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.49 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.49 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.49 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.49 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.49 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.49 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.49 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.49 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.49 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.49 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.49 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.49 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.49 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.49 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.48 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.48 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.48 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.48 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.48 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.48 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.48 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.48 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.48 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.48 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.48 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.48 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.48 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.48 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.48 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.48 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.48 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.48 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.48 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.48 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.48 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.48 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.48 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.47 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.47 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.47 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.47 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.47 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.47 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.47 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.47 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.47 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.47 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.47 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.47 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.47 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.46 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.46 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.46 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.46 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.46 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.46 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.46 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.46 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.46 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.46 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.46 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.46 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.46 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.46 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.45 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.45 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.45 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.45 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.45 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.45 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.45 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.45 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.45 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.45 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.45 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.44 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.44 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.44 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.44 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.44 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.44 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.44 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.43 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.43 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.43 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.43 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.43 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.43 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.43 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.43 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.42 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.42 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.42 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.42 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.42 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.41 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.41 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.41 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.41 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.4 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.4 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.4 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.39 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.38 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.38 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.37 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.37 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.37 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.37 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.37 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.36 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.36 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.36 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.35 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.35 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.35 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.35 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.35 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.33 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.33 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.33 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.31 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.31 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.3 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.3 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.29 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.29 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.28 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.27 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.27 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.27 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.27 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.24 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.2 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.11 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.03 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.98 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.98 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.95 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.93 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.91 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.9 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.89 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.88 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.87 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.87 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.85 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.84 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.71 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.45 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.35 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.16 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.01 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 97.84 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 97.81 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 97.8 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.75 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.75 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.71 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.7 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.69 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.55 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.55 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.54 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 97.53 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.45 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.41 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.38 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.33 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.31 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.23 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 96.99 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.98 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 96.98 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.89 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 96.8 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 96.78 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 96.75 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.73 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.69 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.6 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 96.6 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.59 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.42 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.34 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 96.31 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 96.22 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.1 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 96.07 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 95.99 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.96 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 95.96 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 95.86 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 95.81 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.81 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.72 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.57 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 95.55 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 95.52 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.48 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.47 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 95.38 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 95.35 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.35 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 95.29 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.28 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 95.28 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 95.22 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 95.18 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 95.02 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 94.89 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 94.89 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 94.87 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 94.85 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 94.84 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 94.64 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.52 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 94.45 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 94.39 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 94.33 | |
| 2cnr_A | 82 | FAS, ACP, acyl carrier protein; polykdetide, phosp | 94.23 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 94.22 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 94.04 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 94.01 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 93.92 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 93.9 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 93.82 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 93.81 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 93.79 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 93.68 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 93.65 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 93.6 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 93.57 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 93.35 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 93.25 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 93.23 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 93.13 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 93.11 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 92.79 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 92.65 | |
| 1f80_D | 81 | Acyl carrier protein; transferase; HET: PN2; 2.30A | 92.65 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 92.61 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 92.6 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 92.55 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 92.43 | |
| 3gzm_A | 81 | Acyl carrier protein; helix bundle, phosphopanteth | 92.28 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 92.22 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 92.13 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 91.84 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 91.82 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 91.68 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 91.59 | |
| 1nq4_A | 95 | Oxytetracycline polyketide synthase acyl carrier p | 91.52 | |
| 2l3v_A | 79 | ACP, acyl carrier protein; structural genomi seatt | 91.5 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 91.36 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 91.33 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 91.31 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 91.26 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 91.21 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 91.16 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 91.16 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 91.15 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 91.11 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 91.08 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 91.04 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 90.97 | |
| 2fq1_A | 287 | Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy | 90.9 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 90.88 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 90.85 | |
| 2kjs_A | 87 | Putative acyl carrier protein; alpha, ACP, PNS, st | 90.78 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 90.61 | |
| 3ejb_A | 97 | Acyl carrier protein; protein-protein complex, cyt | 90.49 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 90.25 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 90.23 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 90.2 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 90.13 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 90.11 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 90.08 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 90.03 | |
| 2qnw_A | 82 | Acyl carrier protein; malaria, SGC, structural gen | 89.65 | |
| 1klp_A | 115 | ACP, ACPM, meromycolate extension acyl carrier pro | 89.27 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 89.19 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 89.03 | |
| 1af8_A | 86 | Actinorhodin polyketide synthase acyl carrier Pro; | 89.01 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 88.97 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 88.59 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 88.36 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 88.14 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 87.92 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 87.65 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 87.63 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 87.47 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 87.46 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 87.32 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 87.18 | |
| 2lte_A | 103 | Specialized acyl carrier protein; APO protein, tra | 87.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 87.03 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 86.84 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 86.74 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 86.67 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 86.62 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 86.62 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 86.45 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 86.31 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 86.3 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 86.19 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 86.04 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 86.04 | |
| 2kwl_A | 84 | ACP, acyl carrier protein; structural genomics, se | 86.03 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 85.87 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 85.81 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 85.78 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 85.7 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 85.61 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 85.47 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 85.46 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 85.41 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 85.38 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 85.35 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 85.3 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 85.26 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 85.0 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 84.94 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 84.89 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 84.87 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 84.78 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 84.65 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 84.63 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 84.57 | |
| 2jq4_A | 105 | AGR_C_4658P, hypothetical protein ATU2571; ATC2521 | 84.52 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 84.48 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 84.4 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 84.37 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 83.82 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 83.75 |
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-27 Score=226.36 Aligned_cols=223 Identities=16% Similarity=0.150 Sum_probs=112.3
Q ss_pred CCCCCCccccccCCeEEEecCcccchHHHHHHH-----------HhhCCChHHhHHhhccCCCCc--hhh---hhhhhh-
Q psy14522 59 DEVGSPIQEFYRGASVFVTGGTGFMGKTLTEKL-----------LRACPHLERVYLLVRPKKGKT--VSE---RLDELF- 121 (298)
Q Consensus 59 ~~~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l-----------l~~~ptv~~l~~~i~~~~~~~--~~~---rl~~~~- 121 (298)
-...+++.++..++|||.+|||||++.+|..++ ++++|||+.|+.+++...... ..+ .++.+.
T Consensus 54 w~~~l~~~~i~~~~~ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~~~~t~~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (508)
T 4f6l_B 54 FGEVLKQNDVGVDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTLYQYKTVRQIVNYMYQNQQSLVALPDNLSELQKIVM 133 (508)
T ss_dssp -----------------------------------------------------------------CCCCSTHHHHHHHHH
T ss_pred HHHHhCCCCCCCCCChHHcCchHHHHHHHHHHHHHcCCCccHHHHhcCCcHHHHHHHHHhhccccccchhhhHHHHHHhh
Confidence 334567779999999999999999998876554 567899999999988643311 111 111110
Q ss_pred ---h------hhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCc
Q psy14522 122 ---E------DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVP 192 (298)
Q Consensus 122 ---~------~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~ 192 (298)
. .+.....|+|||||||||||++|+++|++.|++ |+|++|+.....+..++.+.+...+...+. .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~VLVTGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~---~ 207 (508)
T 4f6l_B 134 SRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGYSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETV---E 207 (508)
T ss_dssp HHHTTCCCSTTSCBCCCEEEEESCTTSHHHHHHHHHTBTTEEE---EEEEEESSSHHHHHHHHHHHHHHHSCHHHH---H
T ss_pred hcccccccccccccCCCCeEEEECCccchHHHHHHHHHhcCCE---EEEEECCCChHHHHHHHHHHHHHhcccccc---h
Confidence 0 011223579999999999999999999777654 999999877655666766655432110000 1
Q ss_pred cccCCeEEEecCCCC-CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc-------------eEEEEeCC
Q psy14522 193 HFRSKISVVTGDVSL-PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG-------------SFVHVSTA 258 (298)
Q Consensus 193 ~~~~~v~~v~~Dl~~-~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g-------------~~v~iSS~ 258 (298)
....+++++.+|+++ ..++ +..++|+|||+||.+++..++..++++|+.| +|||+||+
T Consensus 208 ~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~ 279 (508)
T 4f6l_B 208 MMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTI 279 (508)
T ss_dssp HHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEES
T ss_pred hccCceEEEecCCcccccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCCh
Confidence 123689999999999 4443 5678999999999987777777777778777 99999998
Q ss_pred cccC-------CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHC-------PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~-------~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++ + ...+++|+.+..+..+.+.|..+||.+|+++..+
T Consensus 280 ~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 323 (508)
T 4f6l_B 280 SV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEA 323 (508)
T ss_dssp CT-TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHH
T ss_pred hh-ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHH
Confidence 76 2 2346778776544556778999999999999875
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-20 Score=180.39 Aligned_cols=166 Identities=26% Similarity=0.255 Sum_probs=121.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHh---CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRA---CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~---g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
..+|+|||||||||||++++++|++. |+ +|++++|+.....+.+++.+.+..+....+..+.+....++.++.+
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~---~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG---RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC---EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC---EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 46899999999999999999999999 54 4999999877555555554433210000000001112368999999
Q ss_pred CCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 204 DVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
|++++.+|++.+.+..+++++|+|||+||..++ .++...+++|+.| +|||+||.+++. ...++
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~ 226 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTC
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCc
Confidence 999999999999999999999999999998876 5555666777777 899999975543 34466
Q ss_pred cCcCCCCCCC--------hHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYD--------YKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~--------~y~~yk~sK~~aE~~l~~~ 296 (298)
.|+....|.+ ..+.|..+||.+|++++.+
T Consensus 227 ~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHH
T ss_pred CCcccccccCcccccccccccchHHHHHHHHHHHHHH
Confidence 7765432222 1355899999999999875
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-18 Score=150.42 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=105.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+||||||+||||+++++.|++.|++ |++++|...... ..++.++.+|+++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dl~d 54 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEI---LRLADLSPLDPA------------------------GPNEECVQCDLAD 54 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEE---EEEEESSCCCCC------------------------CTTEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCE---EEEEecCCcccc------------------------CCCCEEEEcCCCC
Confidence 3578999999999999999999999865 999999754311 2578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccC---CCCCccCc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHC---PRQEIDEV 270 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~---~~~~~~E~ 270 (298)
+. .+..+++++|+||||||.. ...+++..+++|+.| +|||+||+.+.+ ...++.|+
T Consensus 55 ~~------~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~ 127 (267)
T 3rft_A 55 AN------AVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD 127 (267)
T ss_dssp HH------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT
T ss_pred HH------HHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC
Confidence 76 8899999999999999984 456778888999988 999999975543 33467777
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.+ .|..+|+..|.+++.+
T Consensus 128 ~~~~~~~---~Y~~sK~~~e~~~~~~ 150 (267)
T 3rft_A 128 VPARPDG---LYGVSKCFGENLARMY 150 (267)
T ss_dssp SCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCC---hHHHHHHHHHHHHHHH
Confidence 6555544 5777888999887643
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=152.57 Aligned_cols=149 Identities=23% Similarity=0.211 Sum_probs=109.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+|||||||||||+++++.|+++|++ |++++|...... ..+...... .......+++++.+|+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~Dl 88 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQV---VIGLDNFSTGHQ--YNLDEVKTL--------VSTEQWSRFCFIEGDI 88 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCH--HHHHHHHHT--------SCHHHHTTEEEEECCT
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCCCch--hhhhhhhhc--------cccccCCceEEEEccC
Confidence 356899999999999999999999999876 999999764321 112111100 0000115899999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCccc--CCCCC
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQE 266 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~ 266 (298)
+++. .+..+++++|+|||+||..... .++...+++|+.| +|||+||.+++ ....+
T Consensus 89 ~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~ 162 (351)
T 3ruf_A 89 RDLT------TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALP 162 (351)
T ss_dssp TCHH------HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS
T ss_pred CCHH------HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCC
Confidence 9876 7889999999999999975432 3445567788877 99999997544 44567
Q ss_pred ccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 163 ~~E~~~~~p~~---~Y~~sK~~~E~~~~~~ 189 (351)
T 3ruf_A 163 KVEENIGNPLS---PYAVTKYVNEIYAQVY 189 (351)
T ss_dssp BCTTCCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 88888766655 5677889999998754
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=152.76 Aligned_cols=131 Identities=18% Similarity=0.121 Sum_probs=102.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+|||||||||||+++++.|+++|++ |++++|.... .++.++.+|++
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~---------------------------~~~~~~~~Dl~ 66 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRT---VRGFDLRPSG---------------------------TGGEEVVGSLE 66 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCC---EEEEESSCCS---------------------------SCCSEEESCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCC---------------------------CCccEEecCcC
Confidence 46789999999999999999999999977 9999987542 46788999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc-ccHHHHhhccccc--------------eEEEEeCCcccC----CCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD-ENIKVAIAINIFG--------------SFVHVSTAYTHC----PRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-~~~~~~~~~Nv~g--------------~~v~iSS~~~~~----~~~~~ 267 (298)
+.. .+..+++++|+|||+|+..... ..+...+++|+.| +|||+||.++++ ...++
T Consensus 67 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~ 140 (347)
T 4id9_A 67 DGQ------ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPV 140 (347)
T ss_dssp CHH------HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred CHH------HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCc
Confidence 876 7888889999999999987644 3346677888877 999999975543 34568
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|+.+..|.+ .|..+|+.+|++++.+
T Consensus 141 ~E~~~~~~~~---~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 141 TEDHPLCPNS---PYGLTKLLGEELVRFH 166 (347)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC---hHHHHHHHHHHHHHHH
Confidence 8887665554 5677899999998754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-18 Score=153.95 Aligned_cols=150 Identities=19% Similarity=0.222 Sum_probs=108.9
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEE-e
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVV-T 202 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v-~ 202 (298)
+..+.+|+||||||+||||++++++|+++|++ |++++|+... .+++...+.. ....+++++ .
T Consensus 6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~ 68 (342)
T 1y1p_A 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASK---LANLQKRWDA-----------KYPGRFETAVV 68 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH-----------HSTTTEEEEEC
T ss_pred ccCCCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCccc---HHHHHHHhhc-----------cCCCceEEEEe
Confidence 44567899999999999999999999999876 9999986321 1222221110 011478888 8
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCcccCC--C-
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAYTHCP--R- 264 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~--~- 264 (298)
+|++++. .+..+++++|+|||+|+......++...+++|+.| +|||+||.+++.. .
T Consensus 69 ~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~ 142 (342)
T 1y1p_A 69 EDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN 142 (342)
T ss_dssp SCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTT
T ss_pred cCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCC
Confidence 9999876 56677779999999999876655666677777766 8999999755421 1
Q ss_pred ---CCccCcCCC-------------CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 ---QEIDEVFYP-------------PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ---~~~~E~~~~-------------~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+. .|..+...|..+|+.+|+++...
T Consensus 143 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 190 (342)
T 1y1p_A 143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190 (342)
T ss_dssp CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 456776531 13456788999999999998764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-18 Score=164.17 Aligned_cols=157 Identities=20% Similarity=0.172 Sum_probs=109.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+|+|||||||||||++++++|++.|++ |++++|+.....+.+++.+.+...+...+. .....++.++.+|++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~---~~~~~~v~~v~~Dl~ 140 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETV---EMMLSNIEVIVGDFE 140 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEE---EEEEEECSSHHHHHHHHHHHHHHHSCHHHH---HHHHTTEEEEEECC-
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCE---EEEEECCCChHHHHHHHHHHHHHhcccccc---ccccCceEEEeCCCC
Confidence 34679999999999999999999887655 999999877555666666655432100000 012368999999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc-------------eEEEEeCCccc------CCCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG-------------SFVHVSTAYTH------CPRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g-------------~~v~iSS~~~~------~~~~~~ 267 (298)
++. .+. ...++|+|||+||..+...++...+++|+.| +|||+||+++. ....++
T Consensus 141 d~~------~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 141 CMD------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTF 213 (427)
T ss_dssp --C------CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGGGSEECSSCSCCEE
T ss_pred Ccc------cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHhCCCccCCCCCccc
Confidence 844 122 5678999999999887667777777888877 99999998761 123467
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|+.+..+..+.+.|..+||.+|++++.+
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 242 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEA 242 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHH
Confidence 88877555556778999999999998864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-17 Score=152.31 Aligned_cols=141 Identities=13% Similarity=0.141 Sum_probs=106.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+..|+|||||||||||++|++.|+++ |++ |++++|........ ....+++++.+|+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~--------------------~~~~~v~~~~~Dl 78 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWE---VFGMDMQTDRLGDL--------------------VKHERMHFFEGDI 78 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCE---EEEEESCCTTTGGG--------------------GGSTTEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCE---EEEEeCChhhhhhh--------------------ccCCCeEEEeCcc
Confidence 56789999999999999999999999 766 99999975432110 0125899999999
Q ss_pred C-CCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCccc--CCCCC
Q psy14522 206 S-LPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTH--CPRQE 266 (298)
Q Consensus 206 ~-~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~--~~~~~ 266 (298)
+ +.. .+..+++++|+|||+||..... .+....+++|+.| +|||+||.+++ ....+
T Consensus 79 ~~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~ 152 (372)
T 3slg_A 79 TINKE------WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQ 152 (372)
T ss_dssp TTCHH------HHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSS
T ss_pred CCCHH------HHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCC
Confidence 9 654 7888888999999999976532 3455667888877 99999997444 34456
Q ss_pred ccCcCCC---CCC-ChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYP---PPY-DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~---~p~-~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.|+... .|. .+...|..+|+.+|+++...
T Consensus 153 ~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 186 (372)
T 3slg_A 153 FDPDASALTYGPINKPRWIYACSKQLMDRVIWGY 186 (372)
T ss_dssp BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 7776543 122 45668899999999998865
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=153.62 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=107.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHH--hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLR--ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~--~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+|||||||||||+++++.|++ .|++ |++++|.........+..+. +.........++.++.+|
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~D 76 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAK---VVVLDKFRSNTLFSNNRPSS--------LGHFKNLIGFKGEVIAAD 76 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSE---EEEEECCCCC-------CCC--------CCCGGGGTTCCSEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCe---EEEEECCCccccccccchhh--------hhhhhhccccCceEEECC
Confidence 4678999999999999999999999 7766 99999875421110000000 000001112467899999
Q ss_pred CCCCCCCCCHHHHHHH-hcCccEEEEcCcccCc-cccHHHHhhccccc-------------eEEEEeCCcccCC-CCCcc
Q psy14522 205 VSLPGLGLSAADRAVL-RRNVTVVFHGAATVRF-DENIKVAIAINIFG-------------SFVHVSTAYTHCP-RQEID 268 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~-~~~~~ 268 (298)
++++. .+..+ ..++|+|||+||.... ...+...+++|+.| +|||+||.++++. ..+++
T Consensus 77 l~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~ 150 (362)
T 3sxp_A 77 INNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNV 150 (362)
T ss_dssp TTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBC
T ss_pred CCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCC
Confidence 99876 77777 7799999999997654 36677888999888 8999999644432 22788
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
|+.+..|.+ .|..+|+.+|++++.+.
T Consensus 151 E~~~~~p~~---~Y~~sK~~~E~~~~~~~ 176 (362)
T 3sxp_A 151 VGKNESPEN---VYGFSKLCMDEFVLSHS 176 (362)
T ss_dssp TTSCCCCSS---HHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCC---hhHHHHHHHHHHHHHHh
Confidence 887666654 57778999999988754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=148.47 Aligned_cols=142 Identities=20% Similarity=0.170 Sum_probs=104.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+|+||||||+||||+++++.|+++|++ |++++|...... ..+++... ...++.++.+|++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLVNSKREAIARIEKI---------------TGKTPAFHETDVS 65 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSSCTHHHHHHHHH---------------HSCCCEEECCCTT
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCCcchHHHHHHHHhh---------------cCCCceEEEeecC
Confidence 4679999999999999999999999876 899998754322 12222111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCccc--CCCC
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQ 265 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~ 265 (298)
++. .+..+++ ++|+|||+||..... ......+++|+.+ +|||+||+.++ ....
T Consensus 66 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~ 139 (341)
T 3enk_A 66 DER------ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERS 139 (341)
T ss_dssp CHH------HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSS
T ss_pred CHH------HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCC
Confidence 876 7888877 899999999976432 3334566777766 99999997444 3445
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 140 ~~~e~~~~~~~~---~Y~~sK~~~e~~~~~~ 167 (341)
T 3enk_A 140 PIDETFPLSATN---PYGQTKLMAEQILRDV 167 (341)
T ss_dssp SBCTTSCCBCSS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 688877665544 5778889999998764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=149.07 Aligned_cols=130 Identities=21% Similarity=0.144 Sum_probs=100.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||+++++.|+++|++ |++++|..... . ..+++++.+|++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-----------------------~-~~~~~~~~~Dl~-~ 53 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNT---PIILTRSIGNK-----------------------A-INDYEYRVSDYT-L 53 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCC-----------------------------CCEEEECCCC-H
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCCcc-----------------------c-CCceEEEEcccc-H
Confidence 478999999999999999999999876 99999983211 0 137889999998 6
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccC--CCCCccCcCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEIDEVFY 272 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~~E~~~ 272 (298)
. .+.++++++|+|||+|+..... ++...+++|+.+ +|||+||.++++ ...+++|+.+
T Consensus 54 ~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~ 126 (311)
T 3m2p_A 54 E------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKEL 126 (311)
T ss_dssp H------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSC
T ss_pred H------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCC
Confidence 5 7888999999999999987654 444455666665 799999975543 3457888876
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..|.+ .|..+|+.+|+++..+
T Consensus 127 ~~p~~---~Y~~sK~~~E~~~~~~ 147 (311)
T 3m2p_A 127 PLPDL---MYGVSKLACEHIGNIY 147 (311)
T ss_dssp CCCSS---HHHHHHHHHHHHHHHH
T ss_pred CCCCc---hhHHHHHHHHHHHHHH
Confidence 66654 5778889999998764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-17 Score=148.44 Aligned_cols=142 Identities=18% Similarity=0.092 Sum_probs=102.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|||||||||||++++++|+++|++ |++++|....... .++... ....+++++.+|+++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~~~--------------~~~~~~~~~~~Dl~d 63 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYE---VYGADRRSGEFAS-WRLKEL--------------GIENDVKIIHMDLLE 63 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCCSTTTT-HHHHHT--------------TCTTTEEECCCCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCccccc-ccHhhc--------------cccCceeEEECCCCC
Confidence 4789999999999999999999999876 9999997643211 122110 011478899999998
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc---------------eEEEEeCCcccC--CCC
Q psy14522 208 PGLGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG---------------SFVHVSTAYTHC--PRQ 265 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~--~~~ 265 (298)
+. .+..++++ +|+|||+||.... ..++...+++|+.| +|||+||.++++ ...
T Consensus 64 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~ 137 (345)
T 2z1m_A 64 FS------NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEI 137 (345)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSS
T ss_pred HH------HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC
Confidence 65 67777764 6999999997643 24556667777766 899999985443 344
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++.|+.+..|.+ .|..+|+.+|++++.+
T Consensus 138 ~~~e~~~~~~~~---~Y~~sK~~~e~~~~~~ 165 (345)
T 2z1m_A 138 PQTEKTPFYPRS---PYAVAKLFGHWITVNY 165 (345)
T ss_dssp SBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 677776655544 5777889999988754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-17 Score=148.08 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=103.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc-------cchhHHHHHHHHHHHHhhhhhcCccccCCeEEE
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG-------KTVSERLDELFEDRLFSRLKAEVPHFRSKISVV 201 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~-------~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v 201 (298)
+|+|||||||||||++++++|++.|++ |++++|.... ....+++... ...++.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~r~~~~~~~~~~~l~~~---------------~~~~~~~~ 63 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQEL---------------TGRSVEFE 63 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHHHH---------------HTCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCcccccccccHHHHHHHHhc---------------cCCceEEE
Confidence 578999999999999999999999877 8888886432 1111222111 01478899
Q ss_pred ecCCCCCCCCCCHHHHHHHhc--CccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCcccC
Q psy14522 202 TGDVSLPGLGLSAADRAVLRR--NVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTHC 262 (298)
Q Consensus 202 ~~Dl~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~ 262 (298)
.+|++++. .+..+++ ++|+|||+||.... ...+...+++|+.| +|||+||.++++
T Consensus 64 ~~D~~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 64 EMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp ECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred ECCCCCHH------HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 99999865 6777777 89999999997643 23455677778777 899999975543
Q ss_pred --CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 --PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 --~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...+++|+.+..|. ...|..+|+.+|+++..+
T Consensus 138 ~~~~~~~~E~~~~~p~--~~~Y~~sK~~~e~~~~~~ 171 (348)
T 1ek6_A 138 NPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDL 171 (348)
T ss_dssp SCSSSSBCTTSCCCCC--SSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCCCC--CCchHHHHHHHHHHHHHH
Confidence 34578887765551 345778899999998764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-17 Score=150.80 Aligned_cols=145 Identities=18% Similarity=0.196 Sum_probs=102.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|||||||||||++|+++|+++|+. .+|++++|...... ..++... ....+++++.+|++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~~~~~~~~-~~~l~~~--------------~~~~~~~~~~~Dl~ 85 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYET-YKIINFDALTYSGN-LNNVKSI--------------QDHPNYYFVKGEIQ 85 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTT-EEEEEEECCCTTCC-GGGGTTT--------------TTCTTEEEEECCTT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCC-cEEEEEeccccccc-hhhhhhh--------------ccCCCeEEEEcCCC
Confidence 46789999999999999999999999855 45788877642211 1111100 11258999999999
Q ss_pred CCCCCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccCC---C
Q psy14522 207 LPGLGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHCP---R 264 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~---~ 264 (298)
++. .+..++++ +|+|||+|+..... ..+...+++|+.| +|||+||.++++. .
T Consensus 86 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~ 159 (346)
T 4egb_A 86 NGE------LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKT 159 (346)
T ss_dssp CHH------HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSS
T ss_pred CHH------HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcC
Confidence 876 78888776 99999999986543 4455677888877 7999999855443 3
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|.+ .|..+|+.+|+++..+
T Consensus 160 ~~~~E~~~~~p~~---~Y~~sK~~~E~~~~~~ 188 (346)
T 4egb_A 160 GRFTEETPLAPNS---PYSSSKASADMIALAY 188 (346)
T ss_dssp CCBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 5788887766655 4677889999998764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=145.37 Aligned_cols=148 Identities=24% Similarity=0.204 Sum_probs=107.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|||||||||||+++++.|++.|++ |++++|..... .+++...... + ......++.++.+|++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~--~~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~ 91 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGH--QRNLDEVRSL-----V---SEKQWSNFKFIQGDIR 91 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCC--HHHHHHHHHH-----S---CHHHHTTEEEEECCTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCccc--hhhHHHHhhh-----c---ccccCCceEEEECCCC
Confidence 56789999999999999999999999876 99999875421 1222221110 0 0000257899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
+.. .+..+++++|+|||+||..... .++...+++|+.| +|||+||.++++ ...++
T Consensus 92 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~ 165 (352)
T 1sb8_A 92 NLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPK 165 (352)
T ss_dssp SHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSB
T ss_pred CHH------HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCC
Confidence 865 7888889999999999976432 4556677888877 899999986554 33477
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.+ .|..+|+.+|++++.+
T Consensus 166 ~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 166 VEDTIGKPLS---PYAVTKYVNELYADVF 191 (352)
T ss_dssp CTTCCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 8887665554 5677889999998654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.4e-17 Score=144.96 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=100.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+.++|||||||||||+++++.|+++|++ |++++|.... . . -++.++.+|++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~-~----------------------~--l~~~~~~~Dl~ 61 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVE---VFGTSRNNEA-K----------------------L--PNVEMISLDIM 61 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCTTC-C----------------------C--TTEEEEECCTT
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcc-c----------------------c--ceeeEEECCCC
Confidence 45789999999999999999999999876 9999987542 1 0 15788999999
Q ss_pred CCCCCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc---------------eEEEEeCCcccC----
Q psy14522 207 LPGLGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG---------------SFVHVSTAYTHC---- 262 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~---- 262 (298)
++. .+..++++ +|+|||+||.... ...+...+++|+.| +|||+||.++++
T Consensus 62 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~ 135 (321)
T 2pk3_A 62 DSQ------RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILP 135 (321)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCG
T ss_pred CHH------HHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCC
Confidence 865 67777765 9999999997653 23556667777766 899999985543
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...+++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 136 ~~~~~~E~~~~~~~~---~Y~~sK~~~E~~~~~~ 166 (321)
T 2pk3_A 136 EESPVSEENQLRPMS---PYGVSKASVGMLARQY 166 (321)
T ss_dssp GGCSBCTTSCCBCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHH
Confidence 345678877655544 5677899999998764
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=144.95 Aligned_cols=144 Identities=25% Similarity=0.263 Sum_probs=102.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|||||||||||++++++|+++|+. .+|++++|....... +.+.. . ....++.++.+|+++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~~------------~--~~~~~~~~~~~Dl~d 65 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLKD------------L--EDDPRYTFVKGDVAD 65 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGTT------------T--TTCTTEEEEECCTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHhh------------h--ccCCceEEEEcCCCC
Confidence 4678999999999999999999999732 348999886421110 11100 0 012578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccC--CCCCc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~--~~~~~ 267 (298)
+. .+..++.++|+|||+||..... .++..++++|+.| +|||+||.++++ ...++
T Consensus 66 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~ 139 (336)
T 2hun_A 66 YE------LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSF 139 (336)
T ss_dssp HH------HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCB
T ss_pred HH------HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCc
Confidence 65 7888888999999999976422 3445566777766 899999975443 34567
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.+ .|..+|+.+|++++.+
T Consensus 140 ~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 165 (336)
T 2hun_A 140 TENDRLMPSS---PYSATKAASDMLVLGW 165 (336)
T ss_dssp CTTBCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC---ccHHHHHHHHHHHHHH
Confidence 8877655544 5777889999988764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-17 Score=146.37 Aligned_cols=138 Identities=17% Similarity=0.103 Sum_probs=95.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||++++++|+++|++ |++++|+..... ++ ...+++++.+|++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~---~l------------------~~~~~~~~~~Dl~d~ 68 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHD---LVLIHRPSSQIQ---RL------------------AYLEPECRVAEMLDH 68 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECTTSCGG---GG------------------GGGCCEEEECCTTCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecChHhhh---hh------------------ccCCeEEEEecCCCH
Confidence 468999999999999999999999866 999999754311 10 013688999999986
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc--------------eEEEEeCCcccCCCC---CccCc
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG--------------SFVHVSTAYTHCPRQ---EIDEV 270 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~---~~~E~ 270 (298)
. .+..+++++|+|||+|+.... ..++...+++|+.| +|||+||.++++... ..+|+
T Consensus 69 ~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~ 142 (342)
T 2x4g_A 69 A------GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEG 142 (342)
T ss_dssp H------HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTT
T ss_pred H------HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCC
Confidence 5 788888999999999997643 23445566777766 999999986554221 23676
Q ss_pred CCCCCCC-hHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYD-YKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~-~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.. ....|..+|+.+|++++.+
T Consensus 143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 143 LFYDSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp CCCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccChHHHHHHHHHHHHHHH
Confidence 6555510 0346788899999998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.4e-17 Score=145.69 Aligned_cols=137 Identities=21% Similarity=0.184 Sum_probs=101.2
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
+..+.+|+||||||+||||++++++|++.|++ |++++|....... . . ....++.++.+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~--~----------------~-~~l~~v~~~~~ 72 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHE---ILVIDNFATGKRE--V----------------L-PPVAGLSVIEG 72 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE---EEEEECCSSSCGG--G----------------S-CSCTTEEEEEC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCccchh--h----------------h-hccCCceEEEe
Confidence 45577899999999999999999999999866 9999996432110 0 0 01147889999
Q ss_pred CCCCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc--ccHHHHhhccccc--------------eEEEEeCCcccCCC-
Q psy14522 204 DVSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD--ENIKVAIAINIFG--------------SFVHVSTAYTHCPR- 264 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~- 264 (298)
|++++. .+..+++ ++|+|||+||..... ..+. +++|+.| +|||+||.++++..
T Consensus 73 Dl~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~ 144 (330)
T 2pzm_A 73 SVTDAG------LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPA 144 (330)
T ss_dssp CTTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCS
T ss_pred eCCCHH------HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCc
Confidence 999865 7888888 899999999976541 2222 5777776 99999998665432
Q ss_pred -C--CccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 265 -Q--EIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 265 -~--~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
. +++|+. .| ...|..+|+.+|++++.
T Consensus 145 ~~~~~~~E~~--~~---~~~Y~~sK~~~e~~~~~ 173 (330)
T 2pzm_A 145 TVPIPIDSPT--AP---FTSYGISKTAGEAFLMM 173 (330)
T ss_dssp SSSBCTTCCC--CC---CSHHHHHHHHHHHHHHT
T ss_pred cCCCCcCCCC--CC---CChHHHHHHHHHHHHHH
Confidence 1 566665 33 34677889999999875
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8.6e-17 Score=148.86 Aligned_cols=138 Identities=17% Similarity=0.086 Sum_probs=103.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+|||||||||||++++++|+++|++ |++++|....... ....+++++.+|+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---------------------~~~~~v~~~~~Dl~d 83 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHMT---------------------EDMFCDEFHLVDLRV 83 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSSC---------------------GGGTCSEEEECCTTS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCe---EEEEECCCccchh---------------------hccCCceEEECCCCC
Confidence 4579999999999999999999999866 9999997543211 011478899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc----cccHHHHhhccccc--------------eEEEEeCCcccCCC-----
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF----DENIKVAIAINIFG--------------SFVHVSTAYTHCPR----- 264 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~----- 264 (298)
+. .+..+++++|+|||+|+.... ..++...+++|+.| +|||+||.++++..
T Consensus 84 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~ 157 (379)
T 2c5a_A 84 ME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLET 157 (379)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSS
T ss_pred HH------HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCc
Confidence 65 788888999999999997653 35566777888877 99999997554321
Q ss_pred --CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 --QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 --~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+... +..+...|..+|+.+|++++.+
T Consensus 158 ~~~~~~E~~~~-~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 158 TNVSLKESDAW-PAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp SSCEECGGGGS-SBCCSSHHHHHHHHHHHHHHHH
T ss_pred cCCCcCcccCC-CCCCCChhHHHHHHHHHHHHHH
Confidence 246666521 2223446778899999988654
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=145.14 Aligned_cols=143 Identities=21% Similarity=0.156 Sum_probs=103.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+|||||||||||++++++|++.|++ |++++|....... +...+ ....++.++.+|+
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---~~~~~-------------~~~~~~~~~~~Dl 66 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPS---LFETA-------------RVADGMQSEIGDI 66 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSC---HHHHT-------------TTTTTSEEEECCT
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEeCCCcccch---hhHhh-------------ccCCceEEEEccc
Confidence 356789999999999999999999999876 9999997543221 11100 0125788999999
Q ss_pred CCCCCCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc---------------eEEEEeCCcccCCC-
Q psy14522 206 SLPGLGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG---------------SFVHVSTAYTHCPR- 264 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~~- 264 (298)
+++. .+..++++ +|+|||+||.... ...+...+++|+.| +|||+||.++++..
T Consensus 67 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~ 140 (357)
T 1rkx_A 67 RDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE 140 (357)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC
T ss_pred cCHH------HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC
Confidence 9865 67777765 8999999996432 23455667777766 89999998655432
Q ss_pred --CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 --QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 --~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.++.|+.+..|. ..|..+|+.+|++++..
T Consensus 141 ~~~~~~E~~~~~~~---~~Y~~sK~~~e~~~~~~ 171 (357)
T 1rkx_A 141 WIWGYRENEAMGGY---DPYSNSKGCAELVTSSY 171 (357)
T ss_dssp SSSCBCTTSCBCCS---SHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCC---CccHHHHHHHHHHHHHH
Confidence 256676554444 45778899999988764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=143.82 Aligned_cols=142 Identities=22% Similarity=0.098 Sum_probs=102.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|||||||||||+++++.|++.|++ |++++|...... ..++... ....++.++.+|+++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~d 74 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLREL--------------GIEGDIQYEDGDMAD 74 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHHT--------------TCGGGEEEEECCTTC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCCcccc-ccchhhc--------------cccCceEEEECCCCC
Confidence 4789999999999999999999999866 999999754321 1121110 012478899999998
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc---------------eEEEEeCCcccC--CCC
Q psy14522 208 PGLGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG---------------SFVHVSTAYTHC--PRQ 265 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~--~~~ 265 (298)
+. .+..++++ +|+|||+||.... ..++...+++|+.| +|||+||.++++ ...
T Consensus 75 ~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~ 148 (335)
T 1rpn_A 75 AC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAE 148 (335)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSS
T ss_pred HH------HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCC
Confidence 65 67777764 7999999997653 24556666777766 899999975544 334
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+..|.+ .|..+|+.+|+++..+
T Consensus 149 ~~~E~~~~~p~~---~Y~~sK~~~e~~~~~~ 176 (335)
T 1rpn_A 149 RQDENTPFYPRS---PYGVAKLYGHWITVNY 176 (335)
T ss_dssp SBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCC---hhHHHHHHHHHHHHHH
Confidence 678887666654 5677889999998764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=142.26 Aligned_cols=132 Identities=19% Similarity=0.196 Sum_probs=98.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||+++++.|+++|++ |++++|....... ....+++++.+|+.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---------------------~~~~~~~~~~~Dl~d~~ 56 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE---VVVVDNLSSGRRE---------------------FVNPSAELHVRDLKDYS 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSCCGG---------------------GSCTTSEEECCCTTSTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCCchh---------------------hcCCCceEEECccccHH
Confidence 58999999999999999999999876 9999987543211 11257889999999865
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCccc--CCCCCccCc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEIDEV 270 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~~E~ 270 (298)
+...+++ |+|||+|+.... ...+...+++|+.| +|||+||.+++ ....+++|+
T Consensus 57 -------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~ 128 (312)
T 3ko8_A 57 -------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE 128 (312)
T ss_dssp -------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred -------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC
Confidence 3334455 999999996432 24556677788877 89999997544 344578888
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.+ .|..+|+.+|++++.+
T Consensus 129 ~~~~p~~---~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 129 EPYKPIS---VYGAAKAAGEVMCATY 151 (312)
T ss_dssp SCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCC---hHHHHHHHHHHHHHHH
Confidence 7666555 5677889999988764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=142.87 Aligned_cols=134 Identities=21% Similarity=0.234 Sum_probs=101.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++++++|++.|++ |++++|...... + ....+++++.+|++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~-------------------~~~~~~~~~~~D~~~~~ 57 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLS---VVVVDNLQTGHE--D-------------------AITEGAKFYNGDLRDKA 57 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--G-------------------GSCTTSEEEECCTTCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCcCch--h-------------------hcCCCcEEEECCCCCHH
Confidence 68999999999999999999999866 888888653211 0 01136889999999865
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCcc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEID 268 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~~ 268 (298)
.+..+++ ++|+|||+|+..... .++...+++|+.| +|||+||.++++ ...+++
T Consensus 58 ------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~ 131 (330)
T 2c20_A 58 ------FLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLIT 131 (330)
T ss_dssp ------HHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBC
T ss_pred ------HHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCC
Confidence 6777777 899999999976432 3555677778776 899999975543 345788
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+..|.+ .|..+|+.+|+++..+
T Consensus 132 E~~~~~~~~---~Y~~sK~~~e~~~~~~ 156 (330)
T 2c20_A 132 EETMTNPTN---TYGETKLAIEKMLHWY 156 (330)
T ss_dssp TTSCCCCSS---HHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCC---hHHHHHHHHHHHHHHH
Confidence 887665544 5777899999998764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=142.78 Aligned_cols=139 Identities=22% Similarity=0.270 Sum_probs=101.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
|+||||||+||||++++++|+++ |++ |++++|...... .+.+. . ....++.++.+|+++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~-~~~~~------------~---~~~~~~~~~~~Dl~d 65 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH---VTVLDKLTYAGN-KANLE------------A---ILGDRVELVVGDIAD 65 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCE---EEEEECCCTTCC-GGGTG------------G---GCSSSEEEEECCTTC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCE---EEEEeCCCCCCC-hhHHh------------h---hccCCeEEEECCCCC
Confidence 68999999999999999999999 555 999998643111 01100 0 012578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCCC-------
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCPR------- 264 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~~------- 264 (298)
+. .+..+++++|+|||+||..... .++...+++|+.| +|||+||.++++..
T Consensus 66 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~ 139 (348)
T 1oc2_A 66 AE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLP 139 (348)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGST
T ss_pred HH------HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCccccccc
Confidence 75 7888899999999999976432 3445677888877 89999997544321
Q ss_pred -------CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 -------QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 -------~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 140 ~~~~~~~~~~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 175 (348)
T 1oc2_A 140 GHGEGPGEKFTAETNYNPSS---PYSSTKAASDLIVKAW 175 (348)
T ss_dssp TTTCSTTSSBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcCCCCCCCCCC---ccHHHHHHHHHHHHHH
Confidence 4677776555544 5778889999988764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=146.89 Aligned_cols=142 Identities=14% Similarity=0.102 Sum_probs=98.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+|||||||||||+++++.|++.| ++ |++++|...... +.+ ....+++++.+|+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~--~~l-----------------~~~~~v~~~~~Dl 87 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQ---VHVVDNLLSAEK--INV-----------------PDHPAVRFSETSI 87 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSE---EEEECCCTTCCG--GGS-----------------CCCTTEEEECSCT
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCce---EEEEECCCCCch--hhc-----------------cCCCceEEEECCC
Confidence 567899999999999999999999998 65 999999754311 000 0125789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccC--CCC
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHC--PRQ 265 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~--~~~ 265 (298)
+++. .+..+++++|+|||+|+..... .++...+++|+.| +|||+||.++++ ...
T Consensus 88 ~d~~------~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~ 161 (377)
T 2q1s_A 88 TDDA------LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD 161 (377)
T ss_dssp TCHH------HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC---------
T ss_pred CCHH------HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCC
Confidence 9865 7888888999999999976532 3455566666665 899999975543 233
Q ss_pred Ccc--CcCCCCCC-ChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EID--EVFYPPPY-DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~--E~~~~~p~-~~y~~yk~sK~~aE~~l~~~ 296 (298)
++. |+....|. .+...|..+|+.+|+++..+
T Consensus 162 ~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 195 (377)
T 2q1s_A 162 DAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYY 195 (377)
T ss_dssp -----CCCCCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred CcCcccccccccccCCCCchHHHHHHHHHHHHHH
Confidence 566 76521122 33445788899999998764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=143.90 Aligned_cols=143 Identities=24% Similarity=0.258 Sum_probs=101.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHh---CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA---CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~---g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
|+|||||||||||++++++|+++ |....+|++++|...... .+++.. + ....++.++.+|++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~-~~~~~~---------~-----~~~~~~~~~~~Dl~ 65 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN-RANLAP---------V-----DADPRLRFVHGDIR 65 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC-GGGGGG---------G-----TTCTTEEEEECCTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc-hhhhhh---------c-----ccCCCeEEEEcCCC
Confidence 57999999999999999999996 500034999998642111 011100 0 01257899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
++. .+..++.++|+|||+||..... .++...+++|+.| +|||+||.++++ ...++
T Consensus 66 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~ 139 (337)
T 1r6d_A 66 DAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSW 139 (337)
T ss_dssp CHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCB
T ss_pred CHH------HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCC
Confidence 875 7888889999999999976432 3445677888877 999999975443 33567
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.+ .|..+|+.+|++++.+
T Consensus 140 ~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 165 (337)
T 1r6d_A 140 TESSPLEPNS---PYAASKAGSDLVARAY 165 (337)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC---chHHHHHHHHHHHHHH
Confidence 7876655544 5778889999988754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=144.85 Aligned_cols=140 Identities=21% Similarity=0.266 Sum_probs=99.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||+++++.|++.|++ |++++|..... ....+.. +. ...++.++.+|++++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-~~~~~~~-l~-------------~~~~~~~~~~Dl~d~~ 63 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRKG-ATDNLHW-LS-------------SLGNFEFVHGDIRNKN 63 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSTT-HHHHHHH-HH-------------TTCCCEEEECCTTCHH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCE---EEEEeCCCccC-chhhhhh-hc-------------cCCceEEEEcCCCCHH
Confidence 58999999999999999999999876 89998853211 1111111 11 0146889999999865
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc---------------eEEEEeCCcccCC--CCC-
Q psy14522 210 LGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG---------------SFVHVSTAYTHCP--RQE- 266 (298)
Q Consensus 210 ~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~--~~~- 266 (298)
.+..++++ +|+|||+||.... ..++...+++|+.| +|||+||.++++. ..+
T Consensus 64 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~ 137 (347)
T 1orr_A 64 ------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKY 137 (347)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCE
T ss_pred ------HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCc
Confidence 77888777 9999999997653 23556677788777 6999999755432 222
Q ss_pred ---------------ccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 ---------------IDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ---------------~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+. .+...|..+|+.+|+++..+
T Consensus 138 ~e~~~~~~~~~~~~~~~e~~~~---~~~~~Y~~sK~~~E~~~~~~ 179 (347)
T 1orr_A 138 NETETRYTCVDKPNGYDESTQL---DFHSPYGCSKGAADQYMLDY 179 (347)
T ss_dssp EECSSCEEETTCTTCBCTTSCC---CCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccccCCC---CCCCchHHHHHHHHHHHHHH
Confidence 3344332 34567888999999998764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-16 Score=142.55 Aligned_cols=140 Identities=21% Similarity=0.330 Sum_probs=101.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCC----cceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPH----LERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~----v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+.+|+||||||+||||+++++.|+++|+. +.+|++++|....... ....++.++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------~~~~~~~~~~ 70 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------GFSGAVDARA 70 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------TCCSEEEEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------ccCCceeEEE
Confidence 56889999999999999999999999820 0248999987542110 0124688999
Q ss_pred cCCCCCCCCCCHHHHHHHh-cCccEEEEcCcccCc--cccHHHHhhccccc-------------------eEEEEeCCcc
Q psy14522 203 GDVSLPGLGLSAADRAVLR-RNVTVVFHGAATVRF--DENIKVAIAINIFG-------------------SFVHVSTAYT 260 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~-~~vd~Vih~A~~~~~--~~~~~~~~~~Nv~g-------------------~~v~iSS~~~ 260 (298)
+|++++. .+..++ .++|+|||+||.... ..++...+++|+.| +|||+||+.+
T Consensus 71 ~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~ 144 (342)
T 2hrz_A 71 ADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV 144 (342)
T ss_dssp CCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG
T ss_pred cCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh
Confidence 9999887 677777 489999999997542 23445555666544 6999999855
Q ss_pred cCC--CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCP--RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~--~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++. ..+++|+.+..|.+ .|..+|+.+|+++..+
T Consensus 145 ~~~~~~~~~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 179 (342)
T 2hrz_A 145 FGAPLPYPIPDEFHTTPLT---SYGTQKAICELLLSDY 179 (342)
T ss_dssp CCSSCCSSBCTTCCCCCSS---HHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCcCCCCCCCCcc---hHHHHHHHHHHHHHHH
Confidence 543 35788887665554 5777889999988764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-16 Score=140.55 Aligned_cols=132 Identities=20% Similarity=0.267 Sum_probs=97.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||+++++.|+++| . ++++.+....... ....++.++.+|+++ .
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~---~v~~~~~~~~~~~---------------------~~~~~~~~~~~Dl~~-~ 55 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-E---IVVIDNLSSGNEE---------------------FVNEAARLVKADLAA-D 55 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-C---EEEECCCSSCCGG---------------------GSCTTEEEECCCTTT-S
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-C---EEEEEcCCCCChh---------------------hcCCCcEEEECcCCh-H
Confidence 589999999999999999999997 4 5555554321110 112578999999998 5
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCccc--CCCCCccCc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEIDEV 270 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~~E~ 270 (298)
.+..+++++|+|||+|+.... ...+...+++|+.| +|||+||..++ ....+++|+
T Consensus 56 ------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~ 129 (313)
T 3ehe_A 56 ------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED 129 (313)
T ss_dssp ------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT
T ss_pred ------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC
Confidence 467778899999999996432 35667778888887 89999997544 444577887
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.+ .|..+|+.+|++++.+
T Consensus 130 ~~~~~~~---~Y~~sK~~~e~~~~~~ 152 (313)
T 3ehe_A 130 YPTHPIS---LYGASKLACEALIESY 152 (313)
T ss_dssp SCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCC---HHHHHHHHHHHHHHHH
Confidence 7655554 5677889999998764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.66 E-value=9e-17 Score=144.05 Aligned_cols=133 Identities=15% Similarity=0.135 Sum_probs=100.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+|+|||||||||||++++++|+++ |++ |++++|...... +. .++.++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~----~~-------------------~~~~~~~~D~~ 55 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN---VIASDIRKLNTD----VV-------------------NSGPFEVVNAL 55 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG---EEEEESCCCSCH----HH-------------------HSSCEEECCTT
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE---EEEEcCCCcccc----cc-------------------CCCceEEecCC
Confidence 478999999999999999999998 766 899998754311 10 25678899999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCc--cccHHHHhhccccc--------------eEEEEeCCcccCC---CC
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRF--DENIKVAIAINIFG--------------SFVHVSTAYTHCP---RQ 265 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~--~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~---~~ 265 (298)
++. .+..+++ ++|+|||+|+.... ..++...+++|+.| +|||+||.++++. ..
T Consensus 56 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~ 129 (312)
T 2yy7_A 56 DFN------QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKE 129 (312)
T ss_dssp CHH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSS
T ss_pred CHH------HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCC
Confidence 865 7777777 89999999997543 24455667778776 8999999865543 23
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+|+.+..|.+ .|..+|+.+|++++..
T Consensus 130 ~~~e~~~~~~~~---~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 130 NTPQYTIMEPST---VYGISKQAGERWCEYY 157 (312)
T ss_dssp SBCSSCBCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CccccCcCCCCc---hhHHHHHHHHHHHHHH
Confidence 566766555544 5778889999988754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=145.05 Aligned_cols=147 Identities=22% Similarity=0.263 Sum_probs=97.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+||||||+||||++++++|+++|++ |++++|+.... .++..... + +....+++++.+|+++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~---~~~~~~~~------~----~~~~~~~~~~~~Dl~d 67 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPTNV---KKVKHLLD------L----PKAETHLTLWKADLAD 67 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCTTCH---HHHHHHHT------S----TTHHHHEEEEECCTTS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEECCcchh---HHHHHHHh------c----ccCCCeEEEEEcCCCC
Confidence 4689999999999999999999999876 88888875421 11111100 0 0001357889999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc-c-cHHHHhhccccc---------------eEEEEeCCccc---C-CCCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD-E-NIKVAIAINIFG---------------SFVHVSTAYTH---C-PRQE 266 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-~-~~~~~~~~Nv~g---------------~~v~iSS~~~~---~-~~~~ 266 (298)
+. .+..+++++|+|||+|+...+. . .....+++|+.| +|||+||+.+. . ...+
T Consensus 68 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~ 141 (337)
T 2c29_D 68 EG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPV 141 (337)
T ss_dssp TT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSE
T ss_pred HH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcc
Confidence 76 6778888999999999976432 2 223466777766 89999997432 1 1234
Q ss_pred ccCcCCCCC------CChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPPP------YDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~p------~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+... ..+...|..+|+.+|+++...
T Consensus 142 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 142 YDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred cCcccCCchhhhcccCCccchHHHHHHHHHHHHHHH
Confidence 566643211 012346889999999987653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=142.13 Aligned_cols=139 Identities=21% Similarity=0.199 Sum_probs=101.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+|||||||||||++++++|++. |++ |++++|...... .+ ....+++++.+|+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~---~~-----------------~~~~~~~~~~~D~~~~ 57 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAIS---RF-----------------LNHPHFHFVEGDISIH 57 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCE---EEEEESCCGGGG---GG-----------------TTCTTEEEEECCTTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCE---EEEEeCCcchHH---Hh-----------------hcCCCeEEEeccccCc
Confidence 57999999999999999999998 666 999999753211 00 0125789999999975
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccCc
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDEV 270 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E~ 270 (298)
. +.+..+++++|+|||+||.... ..++...+++|+.| +|||+||.++++ ...+++|+
T Consensus 58 ~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~ 132 (345)
T 2bll_A 58 S-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDED 132 (345)
T ss_dssp S-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTT
T ss_pred H-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCc
Confidence 3 1467777899999999997542 23455667777766 899999975543 33467777
Q ss_pred CCCC---CC-ChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPP---PY-DYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~---p~-~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.. |. .+...|..+|+.+|+++..+
T Consensus 133 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 162 (345)
T 2bll_A 133 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (345)
T ss_dssp TCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred ccccccCcccCcccccHHHHHHHHHHHHHH
Confidence 6431 22 45668999999999998754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=141.72 Aligned_cols=125 Identities=18% Similarity=0.137 Sum_probs=93.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+||||| +||||++|++.|+++|++ |++++|.... ...+++++.+|+++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~---V~~~~r~~~~-------------------------~~~~~~~~~~Dl~d 52 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHE---VTGLRRSAQP-------------------------MPAGVQTLIADVTR 52 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECTTSC-------------------------CCTTCCEEECCTTC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCccc-------------------------cccCCceEEccCCC
Confidence 467899999 599999999999999887 9999997542 12578899999998
Q ss_pred CCCCCCHHHHHHHhcC-ccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCccc--CCCCCccCc
Q psy14522 208 PGLGLSAADRAVLRRN-VTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEIDEV 270 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~-vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~~E~ 270 (298)
+. .+..++++ +|+|||+|+... .+....+++|+.+ +|||+||.+++ ....+++|+
T Consensus 53 ~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~ 124 (286)
T 3gpi_A 53 PD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED 124 (286)
T ss_dssp GG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT
T ss_pred hH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC
Confidence 76 56666666 999999999743 3334455666655 89999997544 344567888
Q ss_pred CCCCCCChHHHHHHHHHHHHHH
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDN 292 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~ 292 (298)
.+..|.+ .|..+|+.+|++
T Consensus 125 ~~~~p~~---~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 125 TPPIAKD---FSGKRMLEAEAL 143 (286)
T ss_dssp SCCCCCS---HHHHHHHHHHHH
T ss_pred CCCCCCC---hhhHHHHHHHHH
Confidence 7766655 467788999998
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.65 E-value=4e-16 Score=134.77 Aligned_cols=127 Identities=20% Similarity=0.261 Sum_probs=95.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCe-EEEecC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKI-SVVTGD 204 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v-~~v~~D 204 (298)
.+.+|+|+|||||||||++++++|+++|++ |++++|+... +.... ..++ +++.+|
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~---V~~~~R~~~~------~~~~~---------------~~~~~~~~~~D 73 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHE---PVAMVRNEEQ------GPELR---------------ERGASDIVVAN 73 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSGGG------HHHHH---------------HTTCSEEEECC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCe---EEEEECChHH------HHHHH---------------hCCCceEEEcc
Confidence 357899999999999999999999999876 9999997432 11111 1477 899999
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCc
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEV 270 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~ 270 (298)
++ . .+.+.++++|+|||+||.... ..+...+++|+.+ +|||+||..+... +.
T Consensus 74 l~-~-------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-----~~ 139 (236)
T 3e8x_A 74 LE-E-------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-----DQ 139 (236)
T ss_dssp TT-S-------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-----GG
T ss_pred cH-H-------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-----CC
Confidence 98 2 456677899999999997643 5677778888877 8999999543321 11
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
.+ .+...|..+|+.+|++++
T Consensus 140 ~~----~~~~~Y~~sK~~~e~~~~ 159 (236)
T 3e8x_A 140 GP----MNMRHYLVAKRLADDELK 159 (236)
T ss_dssp SC----GGGHHHHHHHHHHHHHHH
T ss_pred Ch----hhhhhHHHHHHHHHHHHH
Confidence 11 456789999999999886
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=139.19 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=101.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++++++|++.|++ |++++|...... ..++.++.+|++++.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dl~d~~ 55 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHE---VRLSDIVDLGAA------------------------EAHEEIVACDLADAQ 55 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEE---EEECCSSCCCCC------------------------CTTEEECCCCTTCHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCCCcccc------------------------CCCccEEEccCCCHH
Confidence 68999999999999999999999765 999999754210 136788999999865
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccC---CCCCccCcCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHC---PRQEIDEVFY 272 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~---~~~~~~E~~~ 272 (298)
.+..+++++|+|||+||... ...+...+++|+.+ +|||+||..+++ ...+++|+.+
T Consensus 56 ------~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~ 128 (267)
T 3ay3_A 56 ------AVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVP 128 (267)
T ss_dssp ------HHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSC
T ss_pred ------HHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCC
Confidence 78888899999999999763 45566677778776 899999985543 2346888876
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..|.+ .|..+|+.+|++++.+
T Consensus 129 ~~~~~---~Y~~sK~~~e~~~~~~ 149 (267)
T 3ay3_A 129 RRPDS---LYGLSKCFGEDLASLY 149 (267)
T ss_dssp CCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCC---hHHHHHHHHHHHHHHH
Confidence 65554 5677889999987653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-16 Score=136.78 Aligned_cols=128 Identities=19% Similarity=0.139 Sum_probs=96.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||++++++|+++|+. .+|++++|+....... ...++.++.+|++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------~~~~~~~~~~D~~ 73 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------AYKNVNQEVVDFE 73 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------GGGGCEEEECCGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------ccCCceEEecCcC
Confidence 46789999999999999999999999871 1399999975432110 0136788999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFY 272 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~ 272 (298)
++. .+..+++++|+||||||.......+...+++|+.+ +||++||.++...
T Consensus 74 d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--------- 138 (242)
T 2bka_A 74 KLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------- 138 (242)
T ss_dssp GGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT---------
T ss_pred CHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC---------
Confidence 876 67788889999999999764444456667777766 8999999866531
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+. ..|..+|+..|++++..
T Consensus 139 --~~---~~Y~~sK~~~e~~~~~~ 157 (242)
T 2bka_A 139 --SN---FLYLQVKGEVEAKVEEL 157 (242)
T ss_dssp --CS---SHHHHHHHHHHHHHHTT
T ss_pred --Cc---chHHHHHHHHHHHHHhc
Confidence 22 24778899999998754
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-16 Score=143.58 Aligned_cols=146 Identities=23% Similarity=0.292 Sum_probs=93.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC-CCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR-PKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R-~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+|+|||||||||||+++++.|+++|++ |++++| +.........+.. + +....++.++.+|+++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~Dl~d 64 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS---VNTTIRADPERKRDVSFLTN---------L----PGASEKLHFFNADLSN 64 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCCC----CCCHHHHT---------S----TTHHHHEEECCCCTTC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE---EEEEEeCCccchhHHHHHHh---------h----hccCCceEEEecCCCC
Confidence 578999999999999999999999876 888888 4321111111110 0 0001357889999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcc--ccHHHHhhccccc---------------eEEEEeCCcccC---C-CCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFD--ENIKVAIAINIFG---------------SFVHVSTAYTHC---P-RQE 266 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~--~~~~~~~~~Nv~g---------------~~v~iSS~~~~~---~-~~~ 266 (298)
+. .+..+++++|+|||+|+.+.+. ..+..++++|+.| +|||+||.++.. . ..+
T Consensus 65 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~ 138 (322)
T 2p4h_X 65 PD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDV 138 (322)
T ss_dssp GG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSE
T ss_pred HH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCee
Confidence 76 7888889999999999865332 1123356667665 899999975321 1 234
Q ss_pred ccCcCCCCC-----CChH-HHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPPP-----YDYK-DFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~p-----~~~y-~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+..+ ..+. ..|..+|+++|+++.+.
T Consensus 139 ~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 174 (322)
T 2p4h_X 139 LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEF 174 (322)
T ss_dssp ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred cCCccccchhhhcccCcccccHHHHHHHHHHHHHHH
Confidence 566543211 0111 15889999999987653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6e-16 Score=143.51 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=103.4
Q ss_pred CceeeecCCCCCCchhHHHHHH-HhCCCcceEEEecCCCCcc------chhHHHHHHHHHHHHhhhhhcCccc-cCC---
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLL-RACPHLERVYLLVRPKKGK------TVSERLDELFEDRLFSRLKAEVPHF-RSK--- 197 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll-~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~l~~~~~~~-~~~--- 197 (298)
+|+||||||+||||++++++|+ +.|++ |++++|..... ...+.+.+.+.. + .... ..+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~ 70 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---VVIVDSLVGTHGKSDHVETRENVARKLQQ-----S---DGPKPPWADRY 70 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE---EEEEECCTTTTTCCTTSCCHHHHHHHHHH-----S---CSSCCTTTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCE---EEEEecCCcccccccccchHHHHHHHHHH-----h---hccccccCCce
Confidence 5789999999999999999999 88866 89998875421 002222221111 0 0000 124
Q ss_pred eEEEecCCCCCCCCCCHHHHHHHhc--C-ccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeC
Q psy14522 198 ISVVTGDVSLPGLGLSAADRAVLRR--N-VTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVST 257 (298)
Q Consensus 198 v~~v~~Dl~~~~~gl~~~~~~~l~~--~-vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS 257 (298)
+.++.+|++++. .+..+++ + +|+|||+||..... .++..++++|+.| +|||+||
T Consensus 71 ~~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 71 AALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp CEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 889999999875 6777766 5 99999999976532 4556677888877 8999999
Q ss_pred CcccC--C-------CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHC--P-------RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~--~-------~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.++++ . ..+++|+.+..|. ..|..+|+.+|+++..+
T Consensus 145 ~~v~g~~~~~~~~~~~~~~~E~~~~~p~---~~Y~~sK~~~e~~~~~~ 189 (397)
T 1gy8_A 145 AAIFGNPTMGSVSTNAEPIDINAKKSPE---SPYGESKLIAERMIRDC 189 (397)
T ss_dssp GGGTBSCCC-----CCCCBCTTSCCBCS---SHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcccccccccCcCccCCCCCC---CchHHHHHHHHHHHHHH
Confidence 75443 2 3567787765444 45778899999998764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-16 Score=137.00 Aligned_cols=123 Identities=19% Similarity=0.265 Sum_probs=93.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC-C
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL-P 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~-~ 208 (298)
|+|+|||||||||+++++.|+++|++ |++++|+..... ...+++++.+|+++ +
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~-----------------------~~~~~~~~~~D~~d~~ 54 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQ---IYAGARKVEQVP-----------------------QYNNVKAVHFDVDWTP 54 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCE---EEEEESSGGGSC-----------------------CCTTEEEEECCTTSCH
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCccchh-----------------------hcCCceEEEecccCCH
Confidence 57999999999999999999999866 999999753211 11578999999998 5
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYPP 274 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~~ 274 (298)
+ .+..+++++|+|||+||..... .+++|+.+ +|||+||+++.... +..| .
T Consensus 55 ~------~~~~~~~~~d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~-~~~e----~ 118 (219)
T 3dqp_A 55 E------EMAKQLHGMDAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE-KWIG----A 118 (219)
T ss_dssp H------HHHTTTTTCSEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG-GCCS----H
T ss_pred H------HHHHHHcCCCEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC-cccc----c
Confidence 4 7888889999999999976421 23334333 99999998765432 3334 2
Q ss_pred CCChHHHHHHHHHHHHHHHh
Q psy14522 275 PYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 275 p~~~y~~yk~sK~~aE~~l~ 294 (298)
+..+...|..+|+.+|++++
T Consensus 119 ~~~~~~~Y~~sK~~~e~~~~ 138 (219)
T 3dqp_A 119 GFDALKDYYIAKHFADLYLT 138 (219)
T ss_dssp HHHHTHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHH
Confidence 33456789999999999984
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3e-16 Score=141.08 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=76.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|||||||||||++++++|+++|++ |++++|+... .+ ++.+|++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~---------------------------~~--~~~~Dl~d~ 49 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH---AVGCGFRRAR---------------------------PK--FEQVNLLDS 49 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe---EEEEccCCCC---------------------------CC--eEEecCCCH
Confidence 578999999999999999999999866 9999885321 12 567899886
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC-CCCCccC
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC-PRQEIDE 269 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~-~~~~~~E 269 (298)
. .+..+++ ++|+|||+||.... ..++...+++|+.| +|||+||.++++ ...+++|
T Consensus 50 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E 123 (315)
T 2ydy_A 50 N------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYRE 123 (315)
T ss_dssp --------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCT
T ss_pred H------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCC
Confidence 5 4566655 48999999997643 24455677888877 999999986544 3456788
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+..|.+ .|..+|+.+|++++..
T Consensus 124 ~~~~~~~~---~Y~~sK~~~e~~~~~~ 147 (315)
T 2ydy_A 124 EDIPAPLN---LYGKTKLDGEKAVLEN 147 (315)
T ss_dssp TSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCcC---HHHHHHHHHHHHHHHh
Confidence 87665544 5777899999998764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-16 Score=135.23 Aligned_cols=132 Identities=15% Similarity=0.044 Sum_probs=93.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|+|||||||||+++++.|++.|++ |++++|+..... ....++.++.+|++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~----------------------~~~~~~~~~~~Dl~d~ 58 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHPEKIK----------------------IENEHLKVKKADVSSL 58 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCGGGCC----------------------CCCTTEEEECCCTTCH
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCcccch----------------------hccCceEEEEecCCCH
Confidence 378999999999999999999999866 999999754211 1126889999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccC-CCCCccCcCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHC-PRQEIDEVFYP 273 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~-~~~~~~E~~~~ 273 (298)
. .+..+++++|+|||+|+..... ..++++|+.+ +|||+||..+.. ......|+.+.
T Consensus 59 ~------~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 129 (227)
T 3dhn_A 59 D------EVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGE 129 (227)
T ss_dssp H------HHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTC
T ss_pred H------HHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCc
Confidence 6 7889999999999999865211 1134445444 999999975432 12223344333
Q ss_pred CCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 274 PPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 274 ~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
. +...|..+|+.+|++++.+.
T Consensus 130 ~---p~~~Y~~sK~~~e~~~~~~~ 150 (227)
T 3dhn_A 130 V---PENILPGVKALGEFYLNFLM 150 (227)
T ss_dssp S---CGGGHHHHHHHHHHHHHTGG
T ss_pred c---hHHHHHHHHHHHHHHHHHHh
Confidence 3 34567888999997776553
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.8e-16 Score=139.34 Aligned_cols=141 Identities=20% Similarity=0.213 Sum_probs=98.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc-cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG-KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+||||||+||||++++++|+++|++ |+++.|.... ....+++... ...++.++.+|++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~~~ 62 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERL---------------GGKHPTFVEGDIRNE 62 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHH---------------HTSCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCCcchhHHHHHHhh---------------cCCcceEEEccCCCH
Confidence 57999999999999999999999876 8888764322 1112222111 014678899999986
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
. .+..+++ ++|+|||+||..... ......+++|+.| +|||+||.++++ ...++
T Consensus 63 ~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~ 136 (338)
T 1udb_A 63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPY 136 (338)
T ss_dssp H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSB
T ss_pred H------HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCc
Confidence 5 6666665 599999999975422 3345566777776 899999975543 33467
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..| +...|..+|+.+|++++.+
T Consensus 137 ~e~~~~~~--~~~~Y~~sK~~~e~~~~~~ 163 (338)
T 1udb_A 137 VESFPTGT--PQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp CTTSCCCC--CSSHHHHHHHHHHHHHHHH
T ss_pred CcccCCCC--CCChHHHHHHHHHHHHHHH
Confidence 77765433 1335778899999988764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.1e-16 Score=143.46 Aligned_cols=145 Identities=21% Similarity=0.199 Sum_probs=94.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|||||||||||++|+++|+++|++ |++++|+.........+... . ...+++++.+|++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~---V~~~~r~~~~~~~~~~~~~~-~-------------~~~~~~~~~~Dl~d~ 71 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA---VNTTVRDPDNQKKVSHLLEL-Q-------------ELGDLKIFRADLTDE 71 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE---EEEEESCTTCTTTTHHHHHH-G-------------GGSCEEEEECCTTTS
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCcchhhhHHHHHhc-C-------------CCCcEEEEecCCCCh
Confidence 689999999999999999999999877 88888865432211111111 0 114788999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCcc-cc-HHHHhhccccc---------------eEEEEeCCcc---cC---CCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFD-EN-IKVAIAINIFG---------------SFVHVSTAYT---HC---PRQ 265 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-~~-~~~~~~~Nv~g---------------~~v~iSS~~~---~~---~~~ 265 (298)
. .+..+++++|+|||+|+...+. .+ ..+++++|+.| +|||+||..+ .. ...
T Consensus 72 ~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~ 145 (338)
T 2rh8_A 72 L------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGL 145 (338)
T ss_dssp S------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCC
T ss_pred H------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCc
Confidence 6 5777888999999999976432 11 22356666665 8999999642 11 112
Q ss_pred CccCcCCCC-----CCChHH-HHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPP-----PYDYKD-FMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~-----p~~~y~-~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+.. |..+.. .|..+|+.+|+++..+
T Consensus 146 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 182 (338)
T 2rh8_A 146 VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKF 182 (338)
T ss_dssp CCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHH
T ss_pred ccChhhccchhhccccCCccchHHHHHHHHHHHHHHH
Confidence 567765322 111111 4777889999887653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.4e-16 Score=139.94 Aligned_cols=136 Identities=24% Similarity=0.216 Sum_probs=97.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+|||||||||||++++++|+++|++ |++++|...... +. + .. ..++.++.+|+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~------------l----~~-~~~~~~~~~Dl 75 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDK---VVGIDNFATGRR--EH------------L----KD-HPNLTFVEGSI 75 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GG------------S----CC-CTTEEEEECCT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCCccch--hh------------H----hh-cCCceEEEEeC
Confidence 356789999999999999999999999866 999998753211 00 0 00 14788999999
Q ss_pred CCCCCCCCHHHHHHHhcC--ccEEEEcCcccCcc--ccHHHHhhccccc--------------eEEEEeCCcccC----C
Q psy14522 206 SLPGLGLSAADRAVLRRN--VTVVFHGAATVRFD--ENIKVAIAINIFG--------------SFVHVSTAYTHC----P 263 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~--~~~~~~~~~Nv~g--------------~~v~iSS~~~~~----~ 263 (298)
+++. .+..++++ +|+|||+||..... .++. +++|+.| +|||+||.++++ .
T Consensus 76 ~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~ 147 (333)
T 2q1w_A 76 ADHA------LVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQ 147 (333)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCS
T ss_pred CCHH------HHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCccc
Confidence 9865 67777776 99999999976542 2222 5677766 999999975543 2
Q ss_pred -CCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 264 -RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 264 -~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+++|+. .|. ...|..+|+.+|++++.
T Consensus 148 ~~~~~~E~~--~p~--~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 148 QPVRLDHPR--NPA--NSSYAISKSANEDYLEY 176 (333)
T ss_dssp SSBCTTSCC--CCT--TCHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCC--CCC--CCchHHHHHHHHHHHHh
Confidence 12566665 333 14577889999999876
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.8e-16 Score=138.01 Aligned_cols=128 Identities=19% Similarity=0.229 Sum_probs=95.9
Q ss_pred eeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|||||||||||++++++|++. |++ |++++|..... .++.++.+|++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~--------------------------~~~~~~~~D~~d~ 51 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN---VIASDIVQRDT--------------------------GGIKFITLDVSNR 51 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG---EEEEESSCCCC--------------------------TTCCEEECCTTCH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE---EEEecCCCccc--------------------------cCceEEEecCCCH
Confidence 4899999999999999999998 666 88888864321 1456889999986
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCc--cccHHHHhhccccc--------------eEEEEeCCcccCC---CCCc
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRF--DENIKVAIAINIFG--------------SFVHVSTAYTHCP---RQEI 267 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~--~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~---~~~~ 267 (298)
. .+..+++ ++|+|||+|+.... ...+...+++|+.| +|||+||.++++. ..+.
T Consensus 52 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~ 125 (317)
T 3ajr_A 52 D------EIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKV 125 (317)
T ss_dssp H------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSB
T ss_pred H------HHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCc
Confidence 5 6777776 89999999997542 23455667778776 9999999866543 2356
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.+ .|..+|+.+|++++.+
T Consensus 126 ~e~~~~~p~~---~Y~~sK~~~e~~~~~~ 151 (317)
T 3ajr_A 126 PSITITRPRT---MFGVTKIAAELLGQYY 151 (317)
T ss_dssp CSSSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred cccccCCCCc---hHHHHHHHHHHHHHHH
Confidence 6666555544 5677889999988654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-16 Score=146.76 Aligned_cols=149 Identities=18% Similarity=0.162 Sum_probs=97.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccch--------------hHHHHHHHHHHHHhhhhhcCc
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTV--------------SERLDELFEDRLFSRLKAEVP 192 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~--------------~~rl~~~~~~~~~~~l~~~~~ 192 (298)
..+++|||||||||||++++++|+++|++ |++++|....... .+++.....
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------ 73 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA------------ 73 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH------------
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCe---EEEEEecCccccccccccccccccchhhhhhhhHhh------------
Confidence 45789999999999999999999999876 8888875221000 011111100
Q ss_pred cccCCeEEEecCCCCCCCCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccH---HHHhhccccc--------------
Q psy14522 193 HFRSKISVVTGDVSLPGLGLSAADRAVLRRN--VTVVFHGAATVRFD---ENI---KVAIAINIFG-------------- 250 (298)
Q Consensus 193 ~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~---~~~~~~Nv~g-------------- 250 (298)
....++.++.+|++++. .+..++++ +|+|||+||..... .+. ...+++|+.|
T Consensus 74 ~~~~~v~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~ 147 (404)
T 1i24_A 74 LTGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE 147 (404)
T ss_dssp HHCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCCceEEEECCCCCHH------HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCC
Confidence 01257889999999865 67777776 99999999976422 122 2356777776
Q ss_pred -eEEEEeCCcccCCC-CCccCcCC-----------CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPR-QEIDEVFY-----------PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~-~~~~E~~~-----------~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|||+||.++++.. .++.|+.. ..+..+...|..+|+.+|+++..+
T Consensus 148 ~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 206 (404)
T 1i24_A 148 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 206 (404)
T ss_dssp CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHH
Confidence 79999998554422 34555411 012233446788899999987654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.9e-16 Score=138.02 Aligned_cols=123 Identities=22% Similarity=0.222 Sum_probs=95.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||+++++.|+ +|++ |++++|... ++.+|+.++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~---V~~~~r~~~--------------------------------~~~~D~~d~~ 44 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGN---LIALDVHSK--------------------------------EFCGDFSNPK 44 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSE---EEEECTTCS--------------------------------SSCCCTTCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCe---EEEeccccc--------------------------------cccccCCCHH
Confidence 579999999999999999999 8766 999988631 2467888765
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccC
Q psy14522 210 LGLSAADRAVLRRN--VTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~~--vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E 269 (298)
.+..++++ +|+|||+|+.... ..++...+++|+.| +|||+||.++++ ...++.|
T Consensus 45 ------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E 118 (299)
T 1n2s_A 45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQE 118 (299)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCT
T ss_pred ------HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCC
Confidence 67777765 9999999997653 34566677888877 899999985544 3346788
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+.+..|.+ .|..+|+.+|++++...
T Consensus 119 ~~~~~p~~---~Y~~sK~~~E~~~~~~~ 143 (299)
T 1n2s_A 119 TDATSPLN---VYGKTKLAGEKALQDNC 143 (299)
T ss_dssp TSCCCCSS---HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCcc---HHHHHHHHHHHHHHHhC
Confidence 87665554 57788999999987653
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.2e-16 Score=137.69 Aligned_cols=120 Identities=23% Similarity=0.345 Sum_probs=94.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||+++++.|+++|++ |++++|. .+|+++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~------------------------------------~~D~~d~~ 46 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYD---IYPFDKK------------------------------------LLDITNIS 46 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEE---EEEECTT------------------------------------TSCTTCHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCE---EEEeccc------------------------------------ccCCCCHH
Confidence 48999999999999999999999866 9999882 25777654
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E 269 (298)
.+..+++ ++|+|||+|+..... .++...+++|+.| +|||+||.++++ ...+++|
T Consensus 47 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E 120 (287)
T 3sc6_A 47 ------QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDE 120 (287)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCT
T ss_pred ------HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCC
Confidence 6777776 699999999987533 4667778888877 999999985543 3467888
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+.+..|.+ .|..+|+.+|++++...
T Consensus 121 ~~~~~p~~---~Y~~sK~~~E~~~~~~~ 145 (287)
T 3sc6_A 121 FHNPAPIN---IYGASKYAGEQFVKELH 145 (287)
T ss_dssp TSCCCCCS---HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCC---HHHHHHHHHHHHHHHhC
Confidence 88766655 57778899999988653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=140.01 Aligned_cols=135 Identities=21% Similarity=0.306 Sum_probs=99.4
Q ss_pred hhhhhcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEE
Q psy14522 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVV 201 (298)
Q Consensus 123 ~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v 201 (298)
+..++++|+|||||||||||++++++|++. |+ .+|++++|+... ...+.+.+. ..++.++
T Consensus 15 ~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~~~~~--------------~~~v~~~ 75 (344)
T 2gn4_A 15 HQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMAMEFN--------------DPRMRFF 75 (344)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHHHHHC--------------CTTEEEE
T ss_pred HHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHHHHhc--------------CCCEEEE
Confidence 334567899999999999999999999999 85 249999996321 111111110 1578999
Q ss_pred ecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCcccCCC
Q psy14522 202 TGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTHCPR 264 (298)
Q Consensus 202 ~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~ 264 (298)
.+|+++.. .+..+++++|+|||+||.... .....+.+++|+.| +||++||..+.
T Consensus 76 ~~Dl~d~~------~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--- 146 (344)
T 2gn4_A 76 IGDVRDLE------RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--- 146 (344)
T ss_dssp ECCTTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---
T ss_pred ECCCCCHH------HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---
Confidence 99999875 788889999999999997642 23445677888887 99999996432
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
.|. ..|..+|+.+|+++..+.
T Consensus 147 ---------~p~---~~Y~~sK~~~E~~~~~~~ 167 (344)
T 2gn4_A 147 ---------NPI---NLYGATKLCSDKLFVSAN 167 (344)
T ss_dssp ---------SCC---SHHHHHHHHHHHHHHHGG
T ss_pred ---------CCc---cHHHHHHHHHHHHHHHHH
Confidence 123 357788999999987653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=8.1e-16 Score=136.74 Aligned_cols=122 Identities=20% Similarity=0.229 Sum_probs=94.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..++|||||||||||+++++.|+++|++ |++++|. .+|+++
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~------------------------------------~~Dl~d 51 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVE---VIPTDVQ------------------------------------DLDITN 51 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEE---EEEECTT------------------------------------TCCTTC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCe---EEeccCc------------------------------------cCCCCC
Confidence 4689999999999999999999999865 8988874 257776
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccC--CCCCc
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~ 267 (298)
+. .+..+++ ++|+|||+||..... .++...+++|+.| +|||+||.++++ ...++
T Consensus 52 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~ 125 (292)
T 1vl0_A 52 VL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPI 125 (292)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCB
T ss_pred HH------HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCC
Confidence 54 6777776 799999999976532 4566677888877 899999985544 33478
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
+|+.+..|.+ .|..+|+.+|++++...
T Consensus 126 ~E~~~~~~~~---~Y~~sK~~~E~~~~~~~ 152 (292)
T 1vl0_A 126 TEFDEVNPQS---AYGKTKLEGENFVKALN 152 (292)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCcc---HHHHHHHHHHHHHHhhC
Confidence 8887665554 57788999999987653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=136.86 Aligned_cols=134 Identities=25% Similarity=0.307 Sum_probs=98.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||++++++|+++|++ |++++|...... + ....++.++.+|++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~--~-------------------~~~~~~~~~~~Dl~~~~ 56 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLE---VAVLDNLATGKR--E-------------------NVPKGVPFFRVDLRDKE 56 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEECCCSSCCG--G-------------------GSCTTCCEECCCTTCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCCcCch--h-------------------hcccCeEEEECCCCCHH
Confidence 57999999999999999999999876 888888532210 0 01136778899999865
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCC-cccC---CCCC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTA-YTHC---PRQE 266 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~-~~~~---~~~~ 266 (298)
.+..+++ ++|+|||+|+..... .++...+++|+.| +|||+||. ..++ ...+
T Consensus 57 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~ 130 (311)
T 2p5y_A 57 ------GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER 130 (311)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCC
T ss_pred ------HHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCC
Confidence 6777776 799999999975432 3455677888877 99999997 4332 2346
Q ss_pred ccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 131 ~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 131 AEETWPPRPKS---PYAASKAAFEHYLSVY 157 (311)
T ss_dssp BCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCC---hHHHHHHHHHHHHHHH
Confidence 77776655544 5777889999988654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-15 Score=139.66 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=99.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||+++++.|+++|++ |++++|...... ..++...... . ......++.++.+|++++.
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~l~~~-----~---~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFN-TGRIEHLYKN-----P---QAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTGGGC-----------------CEEEEECCTTCHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCccccc-hhhHHHHhhh-----h---ccccCCCceEEEccCCCHH
Confidence 68999999999999999999999866 999998754211 0011000000 0 0001247889999999865
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-----------------eEEEEeCCcccC--CCC
Q psy14522 210 LGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-----------------SFVHVSTAYTHC--PRQ 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------~~v~iSS~~~~~--~~~ 265 (298)
.+..++++ +|+|||+||..... .++...+++|+.| +|||+||.++++ ...
T Consensus 93 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~ 166 (375)
T 1t2a_A 93 ------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEI 166 (375)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSS
T ss_pred ------HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCC
Confidence 67777764 79999999976532 3445556666655 799999975544 334
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 167 ~~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 194 (375)
T 1t2a_A 167 PQKETTPFYPRS---PYGAAKLYAYWIVVNF 194 (375)
T ss_dssp SBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 778887665544 5777889999988754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=137.35 Aligned_cols=125 Identities=13% Similarity=0.095 Sum_probs=94.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|||||||||||++++++|++.|++ |+++.|.. .+|+++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~-----------------------------------~~D~~d 43 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD-----------------------------------ELNLLD 43 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT-----------------------------------TCCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCc-----------------------------------cCCccC
Confidence 4689999999999999999999999866 78777641 257776
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCc----cccHHHHhhccccc--------------eEEEEeCCcccC--CCC
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRF----DENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQ 265 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~ 265 (298)
.. .+..+++ ++|+|||+|+.... ..+....+++|+.+ +|||+||.++++ ...
T Consensus 44 ~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~ 117 (321)
T 1e6u_A 44 SR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQ 117 (321)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCS
T ss_pred HH------HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCC
Confidence 54 6777777 89999999997642 23455667778776 999999975543 345
Q ss_pred CccCcCCCC-CCCh-HHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPP-PYDY-KDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~-p~~~-y~~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+.. +..+ ...|..+|+.+|++++.+
T Consensus 118 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 150 (321)
T 1e6u_A 118 PMAESELLQGTLEPTNEPYAIAKIAGIKLCESY 150 (321)
T ss_dssp SBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CcCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 677776422 3334 358999999999998764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-15 Score=139.95 Aligned_cols=145 Identities=15% Similarity=0.098 Sum_probs=98.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccC-CeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRS-KISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~-~v~~v~~Dl~~~ 208 (298)
|+||||||+||||+++++.|++.|++ |++++|...... ..++..... ....... ++.++.+|++++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~Dl~d~ 95 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFN-TQRINHIYI---------DPHNVNKALMKLHYADLTDA 95 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTTTTC-----------------CCEEEEECCTTCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE---EEEEecCCcccc-chhhhhhhh---------ccccccccceEEEECCCCCH
Confidence 68999999999999999999999866 999998754210 000000000 0000012 788999999986
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-------------------eEEEEeCCcccCCC
Q psy14522 209 GLGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-------------------SFVHVSTAYTHCPR 264 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------------~~v~iSS~~~~~~~ 264 (298)
. .+..++++ +|+|||+||..... ..+...+++|+.| +|||+||.++++..
T Consensus 96 ~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~ 169 (381)
T 1n7h_A 96 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST 169 (381)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS
T ss_pred H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCC
Confidence 5 67777764 69999999976532 3445556666655 69999997554321
Q ss_pred -CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 -QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 -~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|.+ .|..+|+.+|+++..+
T Consensus 170 ~~~~~E~~~~~~~~---~Y~~sK~~~E~~~~~~ 199 (381)
T 1n7h_A 170 PPPQSETTPFHPRS---PYAASKCAAHWYTVNY 199 (381)
T ss_dssp CSSBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCC---chHHHHHHHHHHHHHH
Confidence 2777877655544 5777889999988754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=140.15 Aligned_cols=137 Identities=18% Similarity=0.231 Sum_probs=97.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+|||||||||||++++++|++.| ++ |+++.|....... .. ..++. +.+|+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~--------------------~~~~~-~~~d~ 98 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VN--------------------LVDLN-IADYM 98 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGGG-GG--------------------TTTSC-CSEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcchh-hc--------------------ccCce-Eeeec
Confidence 356899999999999999999999998 66 8899887542110 00 01223 66788
Q ss_pred CCCCCCCCHHHHHHHhc-----CccEEEEcCcccCc-cccHHHHhhccccc-------------eEEEEeCCcccC--CC
Q psy14522 206 SLPGLGLSAADRAVLRR-----NVTVVFHGAATVRF-DENIKVAIAINIFG-------------SFVHVSTAYTHC--PR 264 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-----~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~ 264 (298)
++.. .+..+++ ++|+|||+|+.... ..++...+++|+.| +|||+||.++++ ..
T Consensus 99 ~~~~------~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~ 172 (357)
T 2x6t_A 99 DKED------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTS 172 (357)
T ss_dssp EHHH------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSS
T ss_pred CcHH------HHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCC
Confidence 7654 6777766 59999999997653 35567777888877 899999985543 33
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
.+++|+.+..|.+ .|..+|+.+|+++..+.
T Consensus 173 ~~~~E~~~~~p~~---~Y~~sK~~~E~~~~~~~ 202 (357)
T 2x6t_A 173 DFIESREYEKPLN---VFGYSKFLFDEYVRQIL 202 (357)
T ss_dssp CCCSSGGGCCCSS---HHHHHHHHHHHHHHHHG
T ss_pred CCcCCcCCCCCCC---hhHHHHHHHHHHHHHHH
Confidence 4678877655544 57788999999987653
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-15 Score=138.96 Aligned_cols=140 Identities=19% Similarity=0.240 Sum_probs=96.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+||||||+||||+++++.|++. |++ |++++|...... .+.+.+ . ....++.++.+|++++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~-~~~~~~------------~--~~~~~~~~~~~Dl~d~ 62 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDT---VVNIDKLTYAGN-LESLSD------------I--SESNRYNFEHADICDS 62 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE---EEEEECCCTTCC-GGGGTT------------T--TTCTTEEEEECCTTCH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCe---EEEEecCCCCCc-hhhhhh------------h--hcCCCeEEEECCCCCH
Confidence 47999999999999999999998 555 899988642111 011100 0 0125789999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-----------------------eEEEEeCCcc
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-----------------------SFVHVSTAYT 260 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------------~~v~iSS~~~ 260 (298)
. .+..+++ ++|+|||+||..... .++..++++|+.| +|||+||.++
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v 136 (361)
T 1kew_A 63 A------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV 136 (361)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred H------HHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHH
Confidence 5 7777777 899999999976421 2333444444433 6999999755
Q ss_pred cCCCC------------CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCPRQ------------EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~~~------------~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++... +++|+.+..|.+ .|..+|+.+|++++.+
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 181 (361)
T 1kew_A 137 YGDLPHPDEVENSVTLPLFTETTAYAPSS---PYSASKASSDHLVRAW 181 (361)
T ss_dssp GCCCCCGGGSCTTSCCCCBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred hCCCcccccccccccCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHH
Confidence 43321 677776555544 5778889999988764
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=137.05 Aligned_cols=140 Identities=18% Similarity=0.212 Sum_probs=99.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|||||||||||++++++|++.|++ |++++|...... ..+.. . ....++.++.+|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~------------~--~~~~~~~~~~~D~~ 85 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNVEH------------W--IGHENFELINHDVV 85 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GGTGG------------G--TTCTTEEEEECCTT
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCE---EEEEeCCCccch--hhhhh------------h--ccCCceEEEeCccC
Confidence 46789999999999999999999999876 899998643211 01000 0 01247889999998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEID 268 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~ 268 (298)
+.. +.++|+|||+|+.... ..++...+++|+.| +|||+||.++++ ...+++
T Consensus 86 ~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~ 154 (343)
T 2b69_A 86 EPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQS 154 (343)
T ss_dssp SCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBC
T ss_pred Chh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCc
Confidence 764 2579999999997642 24556667788777 999999975543 334677
Q ss_pred CcCCC--CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYP--PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~--~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+. .|..+...|..+|+.+|+++..+
T Consensus 155 E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 155 EDYWGHVNPIGPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp TTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence 76432 24455678999999999998654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.4e-16 Score=138.09 Aligned_cols=127 Identities=19% Similarity=0.145 Sum_probs=93.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+|||||||||||+++++.|+++|+ +... ....+.++.+|++
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~--------------------------~~~~~~~~~~D~~ 48 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE--------------------------DWVFVSSKDADLT 48 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC--------------------------EEEECCTTTCCTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc--------------------------cccccCceecccC
Confidence 5678999999999999999999999975 1110 0123445578988
Q ss_pred CCCCCCCHHHHHHHhcC--ccEEEEcCcccCc----cccHHHHhhccccc--------------eEEEEeCCccc--CCC
Q psy14522 207 LPGLGLSAADRAVLRRN--VTVVFHGAATVRF----DENIKVAIAINIFG--------------SFVHVSTAYTH--CPR 264 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~ 264 (298)
++. .+..++++ +|+|||+|+.... ..+....+++|+.| +|||+||.+++ ...
T Consensus 49 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~ 122 (319)
T 4b8w_A 49 DTA------QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTT 122 (319)
T ss_dssp SHH------HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCC
T ss_pred CHH------HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCC
Confidence 765 67777776 9999999998642 24556677888877 89999997554 344
Q ss_pred CCccCcC----CCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVF----YPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~----~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+. +..|.. ..|..+|+.+|++++..
T Consensus 123 ~~~~E~~~~~~~~~p~~--~~Y~~sK~~~E~~~~~~ 156 (319)
T 4b8w_A 123 YPIDETMIHNGPPHNSN--FGYSYAKRMIDVQNRAY 156 (319)
T ss_dssp SSBCGGGGGBSCCCSSS--HHHHHHHHHHHHHHHHH
T ss_pred CCccccccccCCCCCCc--chHHHHHHHHHHHHHHH
Confidence 5788876 333322 35889999999998764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=137.71 Aligned_cols=146 Identities=20% Similarity=0.170 Sum_probs=96.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+||||||+||||++++++|+++|++ |++++|...... .+++...... ......++.++.+|++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~ 67 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFN-TERVDHIYQD---------PHTCNPKFHLHYGDLSDT 67 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------CCEEECCCCSSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCcccc-hHHHHHHhhc---------cccCCCceEEEECCCCCH
Confidence 368999999999999999999999866 999998754210 1112111000 000125788999999986
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-----------------eEEEEeCCcccC--CC
Q psy14522 209 GLGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-----------------SFVHVSTAYTHC--PR 264 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------~~v~iSS~~~~~--~~ 264 (298)
. .+..++++ +|+|||+||..... ..+...+++|+.| +|||+||.++++ ..
T Consensus 68 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~ 141 (372)
T 1db3_A 68 S------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE 141 (372)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS
T ss_pred H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCC
Confidence 5 67777664 79999999975432 3444555666555 799999975544 33
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|.+ .|..+|+.+|++++..
T Consensus 142 ~~~~E~~~~~~~~---~Y~~sK~~~e~~~~~~ 170 (372)
T 1db3_A 142 IPQKETTPFYPRS---PYAVAKLYAYWITVNY 170 (372)
T ss_dssp SSBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCCCCC---hHHHHHHHHHHHHHHH
Confidence 4678877665554 5777889999988754
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.7e-15 Score=131.38 Aligned_cols=143 Identities=15% Similarity=0.164 Sum_probs=103.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |++++|+.. +.++... ....++.++.+|++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl~ 72 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGAT---VIMAVRDTR------KGEAAAR------------TMAGQVEVRELDLQ 72 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHT------------TSSSEEEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhcCCeeEEEcCCC
Confidence 56899999999999999999999999866 888888632 2222111 12357899999999
Q ss_pred CCCCCCCHHHHHHHhc---CccEEEEcCcccCc-----cccHHHHhhccccc--------------eEEEEeCCcccCCC
Q psy14522 207 LPGLGLSAADRAVLRR---NVTVVFHGAATVRF-----DENIKVAIAINIFG--------------SFVHVSTAYTHCPR 264 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~-----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~ 264 (298)
+.. .+..+++ ++|++|||||.... ...++..+++|+.| +||++||..+....
T Consensus 73 d~~------~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~ 146 (291)
T 3rd5_A 73 DLS------SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGR 146 (291)
T ss_dssp CHH------HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCC
T ss_pred CHH------HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCC
Confidence 876 6666665 67999999997542 24566788999988 99999998654322
Q ss_pred CCccCc-CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEV-FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~-~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
....+. ....+..++..|..+|...+.+.+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 179 (291)
T 3rd5_A 147 INLEDLNWRSRRYSPWLAYSQSKLANLLFTSEL 179 (291)
T ss_dssp CCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccccCCCCcchHHHHHHHHHHHHHHH
Confidence 111111 11134567788999999888876654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=5.4e-15 Score=147.31 Aligned_cols=143 Identities=19% Similarity=0.154 Sum_probs=102.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+||||||+||||++++++|+++|++ |++++|...... ..+++... ...++.++.+|+
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~l~~~---------------~~~~v~~v~~Dl 70 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLEVL---------------TKHHIPFYEVDL 70 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHHHH---------------HTSCCCEEECCT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCcchHHHHHHHhhc---------------cCCceEEEEcCC
Confidence 46789999999999999999999999866 899988754321 11222111 015788999999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccCC---
Q psy14522 206 SLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHCP--- 263 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~--- 263 (298)
+++. .+..+++ ++|+|||+||..... ......+++|+.| +|||+||+++++.
T Consensus 71 ~d~~------~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~ 144 (699)
T 1z45_A 71 CDRK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATR 144 (699)
T ss_dssp TCHH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGG
T ss_pred CCHH------HHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCcc
Confidence 9865 6777777 899999999976532 2334567778776 8999999865542
Q ss_pred ---CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 ---RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ---~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+++|+.+..|. ..|..+|+.+|++++.+
T Consensus 145 ~~~~~~~~E~~~~~p~---~~Y~~sK~~~E~~~~~~ 177 (699)
T 1z45_A 145 FPNMIPIPEECPLGPT---NPYGHTKYAIENILNDL 177 (699)
T ss_dssp STTCCSBCTTSCCCCC---SHHHHHHHHHHHHHHHH
T ss_pred ccccCCccccCCCCCC---ChHHHHHHHHHHHHHHH
Confidence 2356676655454 45778899999998764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-15 Score=147.37 Aligned_cols=142 Identities=21% Similarity=0.203 Sum_probs=103.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+|||||||||||++++++|++. |++ |++++|+..... ++ ....+++++.+|+
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~---V~~~~r~~~~~~---~~-----------------~~~~~v~~v~~Dl 369 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAIS---RF-----------------LNHPHFHFVEGDI 369 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEE---EEEEESCCTTTG---GG-----------------TTCTTEEEEECCT
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCE---EEEEEcCchhhh---hh-----------------ccCCceEEEECCC
Confidence 46789999999999999999999998 655 999999754211 00 0125789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~ 267 (298)
++.. ..+..+++++|+|||+||.... ..++...+++|+.| +|||+||.++++ ...++
T Consensus 370 ~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~ 444 (660)
T 1z7e_A 370 SIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYF 444 (660)
T ss_dssp TTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSB
T ss_pred CCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCccc
Confidence 9864 1366677789999999997653 24556677788777 899999975543 33467
Q ss_pred cCcCCC---CC-CChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYP---PP-YDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~---~p-~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+. .| ..+...|..+|+.+|+++..+
T Consensus 445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 477 (660)
T 1z7e_A 445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 477 (660)
T ss_dssp CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccCcccCCCCCcHHHHHHHHHHHHHH
Confidence 777642 12 245567899999999998754
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.8e-15 Score=134.01 Aligned_cols=132 Identities=19% Similarity=0.230 Sum_probs=96.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
+|||||||||||++++++|+++| ++ |+++.|...... ...+ .++. +.+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~-~~~~--------------------~~~~-~~~d~~~~~ 55 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK-FVNL--------------------VDLN-IADYMDKED 55 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGG-GHHH--------------------HTSC-CSEEEEHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCch-hhhc--------------------Ccce-eccccccHH
Confidence 48999999999999999999998 66 899988754321 1111 1222 667887654
Q ss_pred CCCCHHHHHHHhcC-----ccEEEEcCcccCc-cccHHHHhhccccc-------------eEEEEeCCcccC--CCCCcc
Q psy14522 210 LGLSAADRAVLRRN-----VTVVFHGAATVRF-DENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEID 268 (298)
Q Consensus 210 ~gl~~~~~~~l~~~-----vd~Vih~A~~~~~-~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~ 268 (298)
.+..++++ +|+|||+|+.... ..++...+++|+.| +|||+||.++++ ...+++
T Consensus 56 ------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~ 129 (310)
T 1eq2_A 56 ------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIE 129 (310)
T ss_dssp ------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCS
T ss_pred ------HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCC
Confidence 67777764 9999999997653 34566677888777 899999985543 333678
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 269 EVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 269 E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+..|.+ .|..+|+.+|+++...
T Consensus 130 E~~~~~p~~---~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 130 SREYEKPLN---VYGYSKFLFDEYVRQI 154 (310)
T ss_dssp SGGGCCCSS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 877655554 5677899999998765
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-15 Score=125.78 Aligned_cols=125 Identities=20% Similarity=0.094 Sum_probs=90.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|+||||||+||++++++|+++|++ |+++.|+..... .....+++++.+|++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~---V~~~~r~~~~~~---------------------~~~~~~~~~~~~D~~~~ 58 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQA 58 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSC---------------------SSSCCCSEEEESCTTSH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCe---EEEEEeChhhcc---------------------cccCCceEEEEecCCCH
Confidence 478999999999999999999999866 999999743211 00125788999999986
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYPP 274 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~~ 274 (298)
+ .+..+++++|+|||+|+....... .++|+.+ +|||+||..+...... .
T Consensus 59 ~------~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~-------~ 121 (206)
T 1hdo_A 59 A------DVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------V 121 (206)
T ss_dssp H------HHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------S
T ss_pred H------HHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc-------c
Confidence 5 788888999999999997543111 0122222 9999999865432211 1
Q ss_pred CCChHHHHHHHHHHHHHHHhh
Q psy14522 275 PYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 275 p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|. +...|..+|+.+|++++.
T Consensus 122 ~~-~~~~y~~~K~~~e~~~~~ 141 (206)
T 1hdo_A 122 PP-RLQAVTDDHIRMHKVLRE 141 (206)
T ss_dssp CG-GGHHHHHHHHHHHHHHHH
T ss_pred cc-cchhHHHHHHHHHHHHHh
Confidence 11 567889999999998864
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.2e-15 Score=131.24 Aligned_cols=130 Identities=16% Similarity=0.215 Sum_probs=94.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|++|||||+|+||++++++|+++|++ |+++.|+... .+.+.+ ....++.++.+|+++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~---------------~~~~~~~~~~~Dv~~ 62 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDT---VIGTARRTEA---LDDLVA---------------AYPDRAEAISLDVTD 62 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGG---GHHHHH---------------HCTTTEEEEECCTTC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHH---------------hccCCceEEEeeCCC
Confidence 5789999999999999999999999876 8888886432 111111 112578999999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 63 ~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~ 136 (281)
T 3m1a_A 63 GE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNI 136 (281)
T ss_dssp HH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 75 4554443 78999999997532 13456678888888 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ..++..|..+|+..|.+.+.+
T Consensus 137 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 165 (281)
T 3m1a_A 137 SSFGGQLS------------FAGFSAYSATKAALEQLSEGL 165 (281)
T ss_dssp CCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred cCccccCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 99865422 223456788888888776643
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.9e-15 Score=129.09 Aligned_cols=134 Identities=10% Similarity=0.135 Sum_probs=94.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 70 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINAD---AANHVVDEIQ------------QLGGQAFACRCDIT 70 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHH------------HhCCceEEEEcCCC
Confidence 46799999999999999999999999876 888888632 1111111111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .+..+++ ++|+||||||.... ...+...+++|+.| +||++
T Consensus 71 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~ 144 (255)
T 1fmc_A 71 SEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 865 5555544 89999999997542 13345667788877 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||..+... ..++..|..+|+..|.+.+.+
T Consensus 145 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 173 (255)
T 1fmc_A 145 TSMAAENK------------NINMTSYASSKAAASHLVRNM 173 (255)
T ss_dssp CCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCC------------CCCCcccHHHHHHHHHHHHHH
Confidence 99865432 123456888888888877654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.3e-16 Score=137.72 Aligned_cols=132 Identities=17% Similarity=0.097 Sum_probs=87.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.+|+|||||||||||+++++.|+++|++ |++++|...... .... +... ....+++++.+|+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~------------~~~~--~~~~~~~~~~~Dl~ 68 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPPMIPPEG------------TGKF--LEKPVLELEERDLS 68 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCCSSCCTT------------SSEE--ECSCGGGCCHHHHT
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcccccchhh------------hhhh--ccCCCeeEEeCccc
Confidence 4689999999999999999999999877 999999754100 0000 0000 00123333344432
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
++|+|||+|+.... .......++ |+.+ +|||+||.++++ ...++
T Consensus 69 ----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~ 131 (321)
T 3vps_A 69 ----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPT 131 (321)
T ss_dssp ----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSB
T ss_pred ----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCC
Confidence 78999999997652 122222334 6555 999999975543 44578
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.+ .|..+|+.+|+++..+
T Consensus 132 ~E~~~~~p~~---~Y~~sK~~~E~~~~~~ 157 (321)
T 3vps_A 132 PEDSPLSPRS---PYAASKVGLEMVAGAH 157 (321)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC---hhHHHHHHHHHHHHHH
Confidence 8887666554 5677889999998764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=126.86 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=94.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|+++|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 64 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGAT---VAIADIDIE------RARQAAA------------EIGPAAYAVQMDVT 64 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCCceEEEeeCC
Confidence 46899999999999999999999999876 888888532 2222111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+..+++ ++|++|||||..... ..+...+++|+.| +||
T Consensus 65 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv 138 (259)
T 4e6p_A 65 RQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKII 138 (259)
T ss_dssp CHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 875 4555544 799999999975321 3456677888887 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... ...+..|..+|...+.+.+.+
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 169 (259)
T 4e6p_A 139 NMASQAGRRG------------EALVAIYCATKAAVISLTQSA 169 (259)
T ss_dssp EECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EECChhhccC------------CCCChHHHHHHHHHHHHHHHH
Confidence 9999866432 123456788888887776643
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.6e-15 Score=128.35 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=94.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 72 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGAR---VIIADLDEAM---ATKAVEDLR------------MEGHDVSSVVMDVT 72 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEecCC
Confidence 46789999999999999999999999876 8888886321 111111111 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccC-c-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVR-F-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~-~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..+++ ++|+||||||... . ...+...+++|+.| +||
T Consensus 73 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 146 (260)
T 3awd_A 73 NTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIV 146 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence 865 4555443 7999999999653 1 12345567788777 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||.++.... |..+...|..+|...|.+++.+
T Consensus 147 ~~sS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~l 179 (260)
T 3awd_A 147 AIGSMSGLIVN----------RPQQQAAYNASKAGVHQYIRSL 179 (260)
T ss_dssp EECCGGGTSCC----------SSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEecchhcccC----------CCCCccccHHHHHHHHHHHHHH
Confidence 99998765321 1122356788888888877654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=127.36 Aligned_cols=140 Identities=15% Similarity=0.127 Sum_probs=96.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc------chhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK------TVSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.... ...+++.+.... + .....++.+
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~ 75 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGAD---IAICDRCENSDVVGYPLATADDLAETVAL-----V----EKTGRRCIS 75 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHHH-----H----HHTTCCEEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCccccccccccccHHHHHHHHHH-----H----HhcCCeEEE
Confidence 56899999999999999999999999876 88888864321 012222222110 0 012357899
Q ss_pred EecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------
Q psy14522 201 VTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 201 v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g---------------- 250 (298)
+.+|+++++ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 76 ~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 149 (281)
T 3s55_A 76 AKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN 149 (281)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 999999875 444444 379999999997542 14556678899988
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ......|..+|...+.+.+.+
T Consensus 150 ~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 185 (281)
T 3s55_A 150 YGRIVTVSSMLGHSA------------NFAQASYVSSKWGVIGLTKCA 185 (281)
T ss_dssp CEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECChhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8999999866532 112346777777777665543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=126.76 Aligned_cols=136 Identities=14% Similarity=0.157 Sum_probs=95.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|..... +.+.+.+.. ...++.++.+|++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~Dl~ 93 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGAD---VAIWYNSHPAD---EKAEHLQKT------------YGVHSKAYKCNIS 93 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCE---EEEEESSSCCH---HHHHHHHHH------------HCSCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHHh------------cCCcceEEEeecC
Confidence 56899999999999999999999999876 88888875431 222222111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc------c---ccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF------D---ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~------~---~~~~~~~~~Nv~g------------------~~ 252 (298)
++. .+..+++ ++|+||||||.... . ..+...+++|+.| +|
T Consensus 94 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~i 167 (279)
T 3ctm_A 94 DPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSL 167 (279)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 865 4444443 59999999997533 1 2344567778776 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+... .+...+..|..+|+..|.+.+.+
T Consensus 168 v~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 3ctm_A 168 IITSSISGKIV----------NIPQLQAPYNTAKAACTHLAKSL 201 (279)
T ss_dssp EEECCCTTSCC-------------CCHHHHHHHHHHHHHHHHHH
T ss_pred EEECchHhccC----------CCCCCcccHHHHHHHHHHHHHHH
Confidence 99999865422 01234667888999988887654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=128.03 Aligned_cols=124 Identities=19% Similarity=0.174 Sum_probs=93.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||++++++|++ |++ |++++|.... . .+ +.+|++++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~---V~~~~r~~~~------------------------~--~~---~~~Dl~~~~ 47 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHE---VIKVYNSSEI------------------------Q--GG---YKLDLTDFP 47 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSC---EEEEESSSCC------------------------T--TC---EECCTTSHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCe---EEEecCCCcC------------------------C--CC---ceeccCCHH
Confidence 5799999999999999999994 666 9999987531 0 12 778998765
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCC-CCCccCc
Q psy14522 210 LGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCP-RQEIDEV 270 (298)
Q Consensus 210 ~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~-~~~~~E~ 270 (298)
.+..++++ +|+|||+||..... .++...+++|+.| +|||+||.+++.. ..++.|+
T Consensus 48 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~ 121 (273)
T 2ggs_A 48 ------RLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEE 121 (273)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTT
T ss_pred ------HHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCC
Confidence 67777765 99999999976532 4566677888877 8999999866532 2367787
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+..|.+ .|..+|+.+|++++.
T Consensus 122 ~~~~~~~---~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 122 DIPNPIN---YYGLSKLLGETFALQ 143 (273)
T ss_dssp SCCCCSS---HHHHHHHHHHHHHCC
T ss_pred CCCCCCC---HHHHHHHHHHHHHhC
Confidence 7655544 567788999998753
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-14 Score=127.80 Aligned_cols=128 Identities=13% Similarity=0.017 Sum_probs=92.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||| ||||+++++.|+++|++ |++++|+.... ..+. ..+++++.+|+.+.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~---V~~~~r~~~~~---~~~~------------------~~~~~~~~~D~~d~ 59 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWR---IIGTSRNPDQM---EAIR------------------ASGAEPLLWPGEEP 59 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCE---EEEEESCGGGH---HHHH------------------HTTEEEEESSSSCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCE---EEEEEcChhhh---hhHh------------------hCCCeEEEeccccc
Confidence 478999998 99999999999999876 99999975321 1111 15789999999873
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHH----HH-hh--ccccceEEEEeCCcccC--CCCCccCcCCCCCCChH
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIK----VA-IA--INIFGSFVHVSTAYTHC--PRQEIDEVFYPPPYDYK 279 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~----~~-~~--~Nv~g~~v~iSS~~~~~--~~~~~~E~~~~~p~~~y 279 (298)
. +.++|+|||+|+......... +. .+ .++. +|||+||.++++ ...+++|+.+..|.+
T Consensus 60 ~-----------~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~-- 125 (286)
T 3ius_A 60 S-----------LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFR-WVGYLSTTAVYGDHDGAWVDETTPLTPTA-- 125 (286)
T ss_dssp C-----------CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCS-EEEEEEEGGGGCCCTTCEECTTSCCCCCS--
T ss_pred c-----------cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCce-EEEEeecceecCCCCCCCcCCCCCCCCCC--
Confidence 2 578999999999765443221 11 11 1221 999999975543 445788888766665
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy14522 280 DFMELVMSRSDDNLEEF 296 (298)
Q Consensus 280 ~~yk~sK~~aE~~l~~~ 296 (298)
.|..+|+.+|+++...
T Consensus 126 -~Y~~sK~~~E~~~~~~ 141 (286)
T 3ius_A 126 -ARGRWRVMAEQQWQAV 141 (286)
T ss_dssp -HHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHhh
Confidence 5778899999998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=125.40 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=93.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. . ...+.+. ....++.++.+|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~-~----~~~~~l~------------~~~~~~~~~~~D~~ 61 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGAN---IVLNGFGDP-A----PALAEIA------------RHGVKAVHHPADLS 61 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC-H----HHHHHHH------------TTSCCEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCch-H----HHHHHHH------------hcCCceEEEeCCCC
Confidence 35789999999999999999999999876 888888754 1 1111111 11246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 62 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~ 135 (255)
T 2q2v_A 62 DVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIIN 135 (255)
T ss_dssp SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 5555554 89999999997532 13456678888876 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+.... .....|..+|...+.+.+.+
T Consensus 136 isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 165 (255)
T 2q2v_A 136 IASVHGLVGS------------TGKAAYVAAKHGVVGLTKVV 165 (255)
T ss_dssp ECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred EcCchhccCC------------CCchhHHHHHHHHHHHHHHH
Confidence 9998664321 12456777788777766543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=126.08 Aligned_cols=127 Identities=18% Similarity=0.210 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.... ...++.++.+|++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~------------------------~~~~~~~~~~Dv~ 78 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYR---VVATSRSIKPS------------------------ADPDIHTVAGDIS 78 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCCCC------------------------SSTTEEEEESCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhhc------------------------ccCceEEEEccCC
Confidence 56899999999999999999999999876 88888875421 1146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+++ ++|++|||||.... ...+...+++|+.| ++|+
T Consensus 79 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~ 152 (260)
T 3un1_A 79 KPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVS 152 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 875 4555443 79999999997532 13456678889888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... +..+...|..+|...+.+.+.+
T Consensus 153 isS~~~~~~~----------~~~~~~~Y~~sKaa~~~l~~~l 184 (260)
T 3un1_A 153 ITTSLVDQPM----------VGMPSALASLTKGGLNAVTRSL 184 (260)
T ss_dssp ECCTTTTSCB----------TTCCCHHHHHHHHHHHHHHHHH
T ss_pred EechhhccCC----------CCCccHHHHHHHHHHHHHHHHH
Confidence 9997553211 1122345777788777776543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=127.34 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=95.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~Dv~ 71 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS---VVVTDLKSE---GAEAVAAAIR------------QAGGKAIGLECNVT 71 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE---EEEEESSHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 57899999999999999999999999876 888888632 1222222211 12357899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .+..++ .++|++|||||.... ...++..+++|+.| +||++
T Consensus 72 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~i 145 (256)
T 3gaf_A 72 DEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNI 145 (256)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 865 444443 379999999997542 13456678889888 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ...+..|..+|...+.+.+.+
T Consensus 146 sS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 174 (256)
T 3gaf_A 146 SSMAGENT------------NVRMASYGSSKAAVNHLTRNI 174 (256)
T ss_dssp CCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 99866422 122456777777777766543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-14 Score=125.26 Aligned_cols=134 Identities=15% Similarity=0.180 Sum_probs=85.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+++|+++||||+|+||++++++|+++|++ |+++ .|.... .+.+.+.+. ....++.++.+|+
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~---V~~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~ 64 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGAN---IVLNGSPASTS---LDATAEEFK------------AAGINVVVAKGDV 64 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECTTCSH---HHHHHHHHH------------HTTCCEEEEESCT
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCcCHHH---HHHHHHHHH------------hcCCcEEEEECCC
Confidence 35789999999999999999999999876 7777 554321 122222111 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..+++ ++|+||||||.... ...+...+++|+.| +||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv 138 (247)
T 2hq1_A 65 KNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKII 138 (247)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 4554443 79999999997532 13455677888776 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+.... ..+..|..+|+..|.+.+.+
T Consensus 139 ~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 169 (247)
T 2hq1_A 139 NITSIAGIIGN------------AGQANYAASKAGLIGFTKSI 169 (247)
T ss_dssp EECC---------------------CHHHHHHHHHHHHHHHHH
T ss_pred EEcChhhccCC------------CCCcHhHHHHHHHHHHHHHH
Confidence 99997543211 12356778888888776654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.9e-14 Score=125.47 Aligned_cols=144 Identities=14% Similarity=0.102 Sum_probs=99.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc------chhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK------TVSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|..... ...+++.+.... + .....++.+
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~ 78 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGAD---IIAVDLCDQIASVPYPLATPEELAATVKL-----V----EDIGSRIVA 78 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHHH-----H----HHHTCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecccccccccccccchHHHHHHHHH-----H----HhcCCeEEE
Confidence 57899999999999999999999999876 88888763210 012222222110 0 011368899
Q ss_pred EecCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc---ccHHHHhhccccc-------------------e
Q psy14522 201 VTGDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------------S 251 (298)
Q Consensus 201 v~~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------------~ 251 (298)
+.+|++++. .+..+++ ++|++|||||..... ..+...+++|+.| +
T Consensus 79 ~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~ 152 (278)
T 3sx2_A 79 RQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGS 152 (278)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred EeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcE
Confidence 999999875 4555443 799999999976432 4566778889888 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||+.+.... ..+...+..|..+|...+.+.+.+
T Consensus 153 iv~isS~~~~~~~--------~~~~~~~~~Y~asKaa~~~~~~~l 189 (278)
T 3sx2_A 153 IVLISSSAGLAGV--------GSADPGSVGYVAAKHGVVGLMRVY 189 (278)
T ss_dssp EEEECCGGGTSCC--------CCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEccHHhcCCC--------ccCCCCchHhHHHHHHHHHHHHHH
Confidence 9999998664321 112235667888888888776643
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-14 Score=126.16 Aligned_cols=131 Identities=13% Similarity=0.102 Sum_probs=93.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|... ++++... ....++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 63 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILDE------EGKAMAA------------ELADAARYVHLDVT 63 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HTGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhhcCceEEEecCC
Confidence 46789999999999999999999999876 888888632 1211111 01134788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 64 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 137 (260)
T 1nff_A 64 QPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIIN 137 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 5555554 79999999997532 13456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... .....|..+|...+.+.+.+
T Consensus 138 isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 167 (260)
T 1nff_A 138 ISSIEGLAGT------------VACHGYTATKFAVRGLTKST 167 (260)
T ss_dssp ECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred EeehhhcCCC------------CCchhHHHHHHHHHHHHHHH
Confidence 9998664321 12456778888888776543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-14 Score=125.94 Aligned_cols=135 Identities=14% Similarity=0.096 Sum_probs=93.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... ..+.+.+.+.. ....++.++.+|++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~D~~ 65 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAA--EIEKVRAGLAA-----------QHGVKVLYDGADLS 65 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHH--HHHHHHHHHHH-----------HHTSCEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCcch--HHHHHHHHHHh-----------ccCCcEEEEECCCC
Confidence 35789999999999999999999999876 8888886421 01222221110 00246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...++..+++|+.| +||+
T Consensus 66 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (260)
T 1x1t_A 66 KGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 454444 379999999997532 13456678888887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ......|..+|...+.+.+.
T Consensus 140 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 168 (260)
T 1x1t_A 140 IASAHGLVA------------SANKSAYVAAKHGVVGFTKV 168 (260)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred ECcHHhCcC------------CCCCchHHHHHHHHHHHHHH
Confidence 999865432 11245677778877777654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=123.72 Aligned_cols=131 Identities=12% Similarity=0.137 Sum_probs=91.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...+|+||||||+|+||+++++.|+++|++ |+++.|+.. ++++... ....++.++.+|+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~ 69 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSK---VIISGSNEE------KLKSLGN------------ALKDNYTIEVCNL 69 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCSSEEEEECCT
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH------------HhccCccEEEcCC
Confidence 457899999999999999999999999876 888888532 2222111 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeC
Q psy14522 206 SLPGLGLSAADRAVLRR---NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVST 257 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS 257 (298)
++.. .+..+++ ++|++|||||.... ...+...+++|+.| +||++||
T Consensus 70 ~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (249)
T 3f9i_A 70 ANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISS 143 (249)
T ss_dssp TSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcc
Confidence 9865 5666654 69999999997532 24567788899888 8999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+... ...+..|..+|...+.+.+.
T Consensus 144 ~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 169 (249)
T 3f9i_A 144 IVGIAG------------NPGQANYCASKAGLIGMTKS 169 (249)
T ss_dssp CCC--C------------CSCSHHHHHHHHHHHHHHHH
T ss_pred HHhccC------------CCCCchhHHHHHHHHHHHHH
Confidence 865432 11245677777777766554
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=125.93 Aligned_cols=133 Identities=11% Similarity=0.044 Sum_probs=94.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. ...++.++.+|++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~Dv~ 66 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFT---VFAGRRNGEK---LAPLVAEIEA------------AGGRIVARSLDAR 66 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESSGGG---GHHHHHHHHH------------TTCEEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCeEEEEECcCC
Confidence 46899999999999999999999999876 8888886432 2222222211 1257899999999
Q ss_pred CCCCCCCHHHHHHHhc------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLRR------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 67 ~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 140 (252)
T 3h7a_A 67 NED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFT 140 (252)
T ss_dssp CHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 875 4555443 78999999997532 13456678889887 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+... ...+..|..+|...+.+.+.
T Consensus 141 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 168 (252)
T 3h7a_A 141 GATASLRG------------GSGFAAFASAKFGLRAVAQS 168 (252)
T ss_dssp EEGGGTCC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHcCC------------CCCCccHHHHHHHHHHHHHH
Confidence 99865422 12345677777777666554
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=125.84 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=94.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+...+.+.. ....++.++.+|++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~Dv~ 80 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGAR---LVLSGRDVSE---LDAARRALGE-----------QFGTDVHTVAIDLA 80 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHH-----------hcCCcEEEEEecCC
Confidence 56899999999999999999999999876 8888886321 1122111110 11257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 81 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv 154 (266)
T 4egf_A 81 EPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAII 154 (266)
T ss_dssp STT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 986 444443 379999999997542 13456678888887 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... ...+..|..+|...+.+.+.+
T Consensus 155 ~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 185 (266)
T 4egf_A 155 TVASAAALAP------------LPDHYAYCTSKAGLVMATKVL 185 (266)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcchhhccC------------CCCChHHHHHHHHHHHHHHHH
Confidence 9999865422 122456777777777665543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-14 Score=125.49 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=91.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|++|||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|+++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv~d 65 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYN---VAVNYAGSK--EKAEAVVEEIK------------AKGVDSFAIQANVAD 65 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTSCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hcCCcEEEEEccCCC
Confidence 5789999999999999999999999876 777666432 11222222211 112578899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 66 ~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i 139 (246)
T 3osu_A 66 AD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINL 139 (246)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 65 4554443 79999999997532 13556678899988 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+... ...+..|..+|...+.+.+.
T Consensus 140 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 167 (246)
T 3osu_A 140 SSVVGAVG------------NPGQANYVATKAGVIGLTKS 167 (246)
T ss_dssp CCHHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cchhhcCC------------CCCChHHHHHHHHHHHHHHH
Confidence 99855421 11234677777776666554
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=126.68 Aligned_cols=136 Identities=13% Similarity=0.128 Sum_probs=95.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dl~ 91 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQ---VAVAARHSDA---LQVVADEIA------------GVGGKALPIRCDVT 91 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSGGG---GHHHHHHHH------------HTTCCCEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEcCCC
Confidence 56899999999999999999999999876 8888886432 223322221 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|++|||||.... ...++..+++|+.| ++|
T Consensus 92 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv 165 (276)
T 3r1i_A 92 QPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTII 165 (276)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 875 4555444 79999999997642 13456677889887 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+.... +...+..|..+|...+.+.+.+
T Consensus 166 ~isS~~~~~~~----------~~~~~~~Y~asKaa~~~l~~~l 198 (276)
T 3r1i_A 166 TTASMSGHIIN----------IPQQVSHYCTSKAAVVHLTKAM 198 (276)
T ss_dssp EECCGGGTSCC----------CSSCCHHHHHHHHHHHHHHHHH
T ss_pred EECchHhcccC----------CCCCcchHHHHHHHHHHHHHHH
Confidence 99998664321 1112346777777777766543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=126.56 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=94.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 68 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQKE---LNDCLTQWR------------SKGFKVEASVCDLS 68 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 46899999999999999999999999876 8888886321 111111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHh--------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR--------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 69 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (260)
T 2ae2_A 69 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV 142 (260)
T ss_dssp CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 455444 579999999997532 13456677888877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ......|..+|...+.+.+.+
T Consensus 143 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 173 (260)
T 2ae2_A 143 FISSVSGALA------------VPYEAVYGATKGAMDQLTRCL 173 (260)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcchhhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 9999865432 112356888888888776643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-14 Score=126.33 Aligned_cols=135 Identities=15% Similarity=0.226 Sum_probs=93.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. ....++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~D~~ 67 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAH---IVLVARQVDR---LHEAARSLKE-----------KFGVRVLEVAVDVA 67 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHHHHHHH-----------hcCCceEEEEcCCC
Confidence 45789999999999999999999999876 8888886321 1122111110 00257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 68 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 141 (263)
T 3ai3_A 68 TPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIH 141 (263)
T ss_dssp SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4555443 79999999997532 13456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+.... ..+..|..+|...+.+.+.+
T Consensus 142 isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 171 (263)
T 3ai3_A 142 NASICAVQPL------------WYEPIYNVTKAALMMFSKTL 171 (263)
T ss_dssp ECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred ECchhhcCCC------------CCcchHHHHHHHHHHHHHHH
Confidence 9998665321 12346777788777776543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=126.87 Aligned_cols=142 Identities=18% Similarity=0.202 Sum_probs=94.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|+.... .+.+.+... ....++.++.+|++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~------------~~~~~~~~~~~Dl~ 74 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGAN---VAVIYRSAADA--VEVTEKVGK------------EFGVKTKAYQCDVS 74 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCTTH--HHHHHHHHH------------HHTCCEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCcchhh--HHHHHHHHH------------hcCCeeEEEEeeCC
Confidence 46789999999999999999999999865 88899864321 111111111 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||
T Consensus 75 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv 148 (265)
T 1h5q_A 75 NTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIV 148 (265)
T ss_dssp CHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEE
Confidence 865 444443 3599999999975321 3345567788776 699
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+...... .. .+..+...|..+|+..+.+.+.+
T Consensus 149 ~~sS~~~~~~~~~--~~---~~~~~~~~Y~~sK~a~~~~~~~l 186 (265)
T 1h5q_A 149 VTSSMSSQIINQS--SL---NGSLTQVFYNSSKAACSNLVKGL 186 (265)
T ss_dssp EECCGGGTSCCEE--ET---TEECSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCchhhccccc--cc---cccccccccHHHHHHHHHHHHHH
Confidence 9999865432110 00 12223566888888888877654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.8e-14 Score=125.83 Aligned_cols=131 Identities=16% Similarity=0.129 Sum_probs=93.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ++.+... +...++.++.+|++
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 83 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAY---VVVADVNED------AAVRVAN------------EIGSKAFGVRVDVS 83 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence 56899999999999999999999999876 888888632 2222111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 84 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~ 157 (277)
T 4dqx_A 84 SAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIIN 157 (277)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4444443 79999999997532 13556678889887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 158 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 187 (277)
T 4dqx_A 158 TTSYTATSA------------IADRTAYVASKGAISSLTRAM 187 (277)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ECchhhCcC------------CCCChhHHHHHHHHHHHHHHH
Confidence 999865422 223456777777777766543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=5.5e-14 Score=123.64 Aligned_cols=136 Identities=21% Similarity=0.168 Sum_probs=94.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+...+.+.. ....++.++.+|++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~Dv~ 70 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGAN---VAVAGRSTAD---IDACVADLDQ-----------LGSGKVIGVQTDVS 70 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHT-----------TSSSCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-----------hCCCcEEEEEcCCC
Confidence 46899999999999999999999999876 8888886321 1111111110 11147899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 71 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 144 (262)
T 3pk0_A 71 DRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVL 144 (262)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 4544443 79999999997532 13456678889887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... +...+..|..+|...+.+.+.+
T Consensus 145 isS~~~~~~-----------~~~~~~~Y~asK~a~~~l~~~l 175 (262)
T 3pk0_A 145 TSSITGPIT-----------GYPGWSHYGATKAAQLGFMRTA 175 (262)
T ss_dssp ECCSBTTTB-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred EechhhccC-----------CCCCChhhHHHHHHHHHHHHHH
Confidence 999865311 1123456777788777776543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.2e-15 Score=127.29 Aligned_cols=128 Identities=17% Similarity=0.183 Sum_probs=92.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+|+|+||||+||||+++++.|++. |++ |+++.|+.. ++.. ...++.++.+|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~---V~~~~r~~~------~~~~----------------~~~~~~~~~~D~ 57 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFV---AKGLVRSAQ------GKEK----------------IGGEADVFIGDI 57 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCE---EEEEESCHH------HHHH----------------TTCCTTEEECCT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcE---EEEEEcCCC------chhh----------------cCCCeeEEEecC
Confidence 4689999999999999999999999 555 999998632 1111 014678899999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCcc----------------ccHHHHhhccccc--------------eEEEE
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFD----------------ENIKVAIAINIFG--------------SFVHV 255 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~----------------~~~~~~~~~Nv~g--------------~~v~i 255 (298)
+++. .+..+++++|+|||+||..... ..+...+++|+.+ +|||+
T Consensus 58 ~d~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~ 131 (253)
T 1xq6_A 58 TDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVV 131 (253)
T ss_dssp TSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHH------HHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEE
Confidence 9865 7888899999999999965321 1111234666665 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHH--HHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKD--FMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~--~yk~sK~~aE~~l~~ 295 (298)
||.++... ..|..+|+ .|..+|+.+|++++.
T Consensus 132 SS~~~~~~---------~~~~~~~~~~~y~~sK~~~e~~~~~ 164 (253)
T 1xq6_A 132 GSMGGTNP---------DHPLNKLGNGNILVWKRKAEQYLAD 164 (253)
T ss_dssp EETTTTCT---------TCGGGGGGGCCHHHHHHHHHHHHHT
T ss_pred cCccCCCC---------CCccccccchhHHHHHHHHHHHHHh
Confidence 99875321 12333443 378899999998864
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.7e-14 Score=122.21 Aligned_cols=134 Identities=16% Similarity=0.201 Sum_probs=92.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCc----ceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHL----ERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v----~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+|+|+||||+|+||+++++.|++.|+.. .+|+++.|+.. ..+.+.+.+. ....++.++.+|
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D 66 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLECR------------AEGALTDTITAD 66 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHHHH------------TTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH---HHHHHHHHHH------------ccCCeeeEEEec
Confidence 6889999999999999999999998610 04888888632 1122221111 112578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eE
Q psy14522 205 VSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~ 252 (298)
++++. .+..+++ ++|+||||||..... ..+...+++|+.| +|
T Consensus 67 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (244)
T 2bd0_A 67 ISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHI 140 (244)
T ss_dssp TTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 99865 4554443 799999999975321 3455667888877 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+... ......|..+|+..+.+.+.
T Consensus 141 v~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 171 (244)
T 2bd0_A 141 FFITSVAATKA------------FRHSSIYCMSKFGQRGLVET 171 (244)
T ss_dssp EEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EEEecchhcCC------------CCCCchhHHHHHHHHHHHHH
Confidence 99999866432 12345678888888877654
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.7e-14 Score=124.12 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=94.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... +.+.+.+. ....++.++.+|++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~Dv~ 92 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAH---VILHGVKPGST---AAVQQRII------------ASGGTAQELAGDLS 92 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSTTTT---HHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCHHHH---HHHHHHHH------------hcCCeEEEEEecCC
Confidence 57899999999999999999999999876 88888875432 12222111 11257899999999
Q ss_pred CCCCCCCHHHHHHHh------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+.. .+..++ .++|++|||||.... ...+...+++|+.| +||++
T Consensus 93 ~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~i 166 (275)
T 4imr_A 93 EAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSI 166 (275)
T ss_dssp STT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 876 444443 379999999997432 13456678889888 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+.. +......|..+|...+.+.+.
T Consensus 167 sS~~~~~------------~~~~~~~Y~asKaa~~~l~~~ 194 (275)
T 4imr_A 167 GSINQLR------------PKSVVTAYAATKAAQHNLIQS 194 (275)
T ss_dssp CCGGGTS------------CCTTBHHHHHHHHHHHHHHHH
T ss_pred CCHHhCC------------CCCCchhhHHHHHHHHHHHHH
Confidence 9986543 222334567777776666554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-14 Score=125.92 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=92.7
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
....+|+||||||+|+||+++++.|+++|++ |+++.|..... ...+..+.+|
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~-------------------------~~~~~~~~~D 61 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAK---VVSVSLDEKSD-------------------------VNVSDHFKID 61 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCC--C-------------------------TTSSEEEECC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchhc-------------------------cCceeEEEec
Confidence 3467899999999999999999999999876 88888864321 1356788999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eE
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~ 252 (298)
++++. .+..++ .++|++|||||..... ..+...+++|+.| +|
T Consensus 62 v~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 135 (269)
T 3vtz_A 62 VTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSI 135 (269)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence 99865 444443 3799999999975321 3456678889887 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... ...+..|..+|...+.+.+.+
T Consensus 136 v~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 167 (269)
T 3vtz_A 136 INIASVQSYAA------------TKNAAAYVTSKHALLGLTRSV 167 (269)
T ss_dssp EEECCGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEECchhhccC------------CCCChhHHHHHHHHHHHHHHH
Confidence 99999866432 122456777788777776543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.1e-14 Score=124.66 Aligned_cols=123 Identities=19% Similarity=0.243 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|.... ..++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--------------------------~~~~~~~~~Dl~ 56 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSK---VIDLSIHDPG--------------------------EAKYDHIECDVT 56 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSCCC--------------------------SCSSEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEecCccc--------------------------CCceEEEEecCC
Confidence 46899999999999999999999999876 8888886432 146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||..... ..+...+++|+.| +||+
T Consensus 57 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 130 (264)
T 2dtx_A 57 NPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVN 130 (264)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4544443 799999999975321 3456678888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ......|..+|...+.+.+.+
T Consensus 131 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 160 (264)
T 2dtx_A 131 ISSVQASII------------TKNASAYVTSKHAVIGLTKSI 160 (264)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ECCchhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 999865432 123456788888887776543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-14 Score=125.19 Aligned_cols=131 Identities=15% Similarity=0.165 Sum_probs=91.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|+. |++..|+.. ++++... ....++.++.+|++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 83 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAI---VGLHGTRED------KLKEIAA------------DLGKDVFVFSANLS 83 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCSSEEEEECCTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceEEEEeecC
Confidence 56899999999999999999999999876 888887532 2222211 11257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 84 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~ 157 (266)
T 3grp_A 84 DRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIIN 157 (266)
T ss_dssp SHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 875 454444 379999999997532 14566778899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 158 isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 187 (266)
T 3grp_A 158 ITSIVGVVG------------NPGQTNYCAAKAGLIGFSKAL 187 (266)
T ss_dssp ECCC-------------------CHHHHHHHHHHHHHHHHHH
T ss_pred ECCHHHcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 999865421 123566778888776665543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=5.8e-14 Score=124.57 Aligned_cols=140 Identities=18% Similarity=0.114 Sum_probs=95.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-------chhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-------TVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|+++||||+|+||+++++.|+++|++ |++++|..... ...+++++.... + .....++.
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~ 80 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGAD---IIACDICAPVSASVTYAPASPEDLDETARL-----V----EDQGRKAL 80 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHHH-----H----HTTTCCEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeccccccccccccccCHHHHHHHHHH-----H----HhcCCeEE
Confidence 57899999999999999999999999876 88888742110 012222222110 0 11235788
Q ss_pred EEecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc---------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------- 250 (298)
++.+|++++. .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 81 ~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 154 (280)
T 3pgx_A 81 TRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEA 154 (280)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999999875 454443 3799999999976421 3456678889887
Q ss_pred ----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 155 ~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 192 (280)
T 3pgx_A 155 GNGGSIVVVSSSAGLKA------------TPGNGHYSASKHGLTALTNTL 192 (280)
T ss_dssp CSCEEEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcchhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 5999999866432 122456777777777665543
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.7e-14 Score=128.12 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=95.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc--cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG--KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~--~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+|+||+++++.|+++|++ |++..|+... ....+.+.+... ....++.++.+|
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~---V~~~~r~~~~r~~~~~~~l~~~~~------------~~~~~~~~~~~D 67 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR---VYASMRDIVGRNASNVEAIAGFAR------------DNDVDLRTLELD 67 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCTTTTTHHHHHHHHHHHH------------HHTCCEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEecCcccccCHHHHHHHHHHHH------------hcCCcEEEEEee
Confidence 35789999999999999999999999876 8888886322 111222222211 112578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eE
Q psy14522 205 VSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~ 252 (298)
++++. .+..+++ ++|++|||||.... ...+...+++|+.| ++
T Consensus 68 vtd~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~i 141 (324)
T 3u9l_A 68 VQSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLL 141 (324)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 99865 5555544 89999999997532 13456678999988 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+.... ....+.|..+|+..|.+.+.+
T Consensus 142 V~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l 174 (324)
T 3u9l_A 142 IWISSSSSAGGT-----------PPYLAPYFAAKAAMDAIAVQY 174 (324)
T ss_dssp EEECCGGGTSCC-----------CSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhccCC-----------CCcchhHHHHHHHHHHHHHHH
Confidence 999998654221 112356778888888776643
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=5.1e-14 Score=122.61 Aligned_cols=133 Identities=15% Similarity=0.213 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCe-EEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKI-SVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v-~~v~~Dl 205 (298)
+.+|+++||||+|+||+++++.|+++|++ |++++|+.. ++++.... + ..++ .++.+|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~~D~ 67 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGAR---LILIDREAA------ALDRAAQE-----L-------GAAVAARIVADV 67 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-------GGGEEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h-------cccceeEEEEec
Confidence 46789999999999999999999999876 888988632 12211110 0 1355 7899999
Q ss_pred CCCCCCCCHHHHHHHh------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 206 SLPGLGLSAADRAVLR------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++. .+..++ .++|+||||||..... ..+...+++|+.| +||+
T Consensus 68 ~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~ 141 (254)
T 2wsb_A 68 TDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVN 141 (254)
T ss_dssp TCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9865 444443 5799999999975421 2345667788876 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... |..+...|..+|+..|.+.+.+
T Consensus 142 isS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~~ 173 (254)
T 2wsb_A 142 LGSMSGTIVN----------RPQFASSYMASKGAVHQLTRAL 173 (254)
T ss_dssp ECCGGGTSCC----------SSSCBHHHHHHHHHHHHHHHHH
T ss_pred EecchhccCC----------CCCcchHHHHHHHHHHHHHHHH
Confidence 9998654321 1122356788888888776643
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-14 Score=124.97 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=91.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+ ..+..++.+|++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~---~~~~~~~~~---------------~~~~~~~~~Dv~ 65 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAK---VIGTATSES---GAQAISDYL---------------GDNGKGMALNVT 65 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHH---------------GGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHh---------------cccceEEEEeCC
Confidence 46899999999999999999999999876 888888632 112221111 135678899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 66 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 139 (248)
T 3op4_A 66 NPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 139 (248)
T ss_dssp CHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 875 4554443 79999999997532 23556678899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|...+.+.+.
T Consensus 140 isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~ 168 (248)
T 3op4_A 140 VGSVVGTMG------------NAGQANYAAAKAGVIGFTKS 168 (248)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EcchhhcCC------------CCCChHHHHHHHHHHHHHHH
Confidence 999855421 11344577777766665543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.1e-14 Score=125.09 Aligned_cols=133 Identities=15% Similarity=0.188 Sum_probs=93.1
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ |+||+++++.|+++|++ |+++.|+.. ..+.+++.... ..++.++.+|
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D 66 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAER---LRPEAEKLAEA-------------LGGALLFRAD 66 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCE---EEEEESCGG---GHHHHHHHHHH-------------TTCCEEEECC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHHh-------------cCCcEEEECC
Confidence 467899999999 99999999999999876 888888642 12222222110 1247889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
++++. .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 67 ~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 140 (261)
T 2wyu_A 67 VTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGG 140 (261)
T ss_dssp TTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCC
Confidence 99865 4444443 78999999997532 13456678888887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+... ...+..|..+|...+.+.+.+
T Consensus 141 ~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 174 (261)
T 2wyu_A 141 GIVTLTYYASEKV------------VPKYNVMAIAKAALEASVRYL 174 (261)
T ss_dssp EEEEEECGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccccCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 7999999765421 123456788888877776543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-14 Score=127.36 Aligned_cols=127 Identities=13% Similarity=0.111 Sum_probs=91.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ++++ ....++.++.+|++
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~---------------~~~~~~~~~~~Dv~ 69 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARRVE------RLKA---------------LNLPNTLCAQVDVT 69 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHH------HHHT---------------TCCTTEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHH---------------hhcCCceEEEecCC
Confidence 46799999999999999999999999987 888888632 1111 11247889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 70 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~ 143 (266)
T 3p19_A 70 DKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIIN 143 (266)
T ss_dssp CHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 444444 379999999997532 13456678899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|+..+.+.+.
T Consensus 144 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~ 172 (266)
T 3p19_A 144 ISSIAGKKT------------FPDHAAYCGTKFAVHAISEN 172 (266)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EcChhhCCC------------CCCCchHHHHHHHHHHHHHH
Confidence 999866532 12234677777776666543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.9e-14 Score=123.75 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=94.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+||||||+|+||++++++|++.|.+..+|+++.|+..... .+.+... ...++.++.+|+
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~---~~~~l~~-------------~~~~~~~~~~Dl 81 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK---ELEDLAK-------------NHSNIHILEIDL 81 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHHHH-------------HCTTEEEEECCT
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH---HHHHhhc-------------cCCceEEEEecC
Confidence 357889999999999999999999999822234999999765322 2222211 125789999999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCcccC-c-------cccHHHHhhccccc------------------
Q psy14522 206 SLPGLGLSAADRAVLRR---------NVTVVFHGAATVR-F-------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~---------~vd~Vih~A~~~~-~-------~~~~~~~~~~Nv~g------------------ 250 (298)
++.+ .+..+++ ++|+||||||... . ...+...+++|+.|
T Consensus 82 ~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 155 (267)
T 1sny_A 82 RNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 155 (267)
T ss_dssp TCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccc
Confidence 9876 4554444 7999999999754 1 13345566777655
Q ss_pred -----------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -----------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -----------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+..... +..+...|..+|...+.+.+.+
T Consensus 156 ~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~l 203 (267)
T 1sny_A 156 NESQPMGVGRAAIINMSSILGSIQGN---------TDGGMYAYRTSKSALNAATKSL 203 (267)
T ss_dssp TTTSCSSTTTCEEEEECCGGGCSTTC---------CSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCceEEEEecccccccCC---------CCCCchHHHHHHHHHHHHHHHH
Confidence 399999986543211 1123445888888888777653
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-14 Score=125.14 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=94.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv~ 85 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGAR---ILINGTDPS---RVAQTVQEFR------------NVGHDAEAVAFDVT 85 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCHH---HHHHHHHHHH------------HTTCCEEECCCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCceEEEEcCCC
Confidence 57899999999999999999999999876 888888632 1122221111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 86 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~ 159 (271)
T 4ibo_A 86 SES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVN 159 (271)
T ss_dssp CHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 4554443 79999999997532 13556678899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 160 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 189 (271)
T 4ibo_A 160 IGSLTSELA------------RATVAPYTVAKGGIKMLTRAM 189 (271)
T ss_dssp ECCGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EccHHhCCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 999865421 123446777777777666543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=5.2e-14 Score=124.24 Aligned_cols=134 Identities=17% Similarity=0.225 Sum_probs=94.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|.... .+.+.+.+. ...++.++.+|++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~-------------~~~~~~~~~~D~~ 74 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAK---VVIADIADDH---GQKVCNNIG-------------SPDVISFVHCDVT 74 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHC-------------CTTTEEEEECCTT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCChhH---HHHHHHHhC-------------CCCceEEEECCCC
Confidence 56899999999999999999999999876 8888885321 111111110 0137899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc---------ccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD---------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g------------------~~ 252 (298)
++. .+..+++ ++|+||||||..... ..+...+++|+.| +|
T Consensus 75 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 148 (278)
T 2bgk_A 75 KDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSI 148 (278)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeE
Confidence 865 5555544 799999999975321 3455677888876 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+.... + .....|..+|+..|.+.+.+
T Consensus 149 v~isS~~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~l 181 (278)
T 2bgk_A 149 VFTASISSFTAG----------E-GVSHVYTATKHAVLGLTTSL 181 (278)
T ss_dssp EEECCGGGTCCC----------T-TSCHHHHHHHHHHHHHHHHH
T ss_pred EEEeeccccCCC----------C-CCCcchHHHHHHHHHHHHHH
Confidence 999998665321 1 13456888888888877654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.5e-14 Score=124.38 Aligned_cols=128 Identities=16% Similarity=0.208 Sum_probs=91.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... +.+.+. + .+ .++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~----~~~~~~--------~--------~~-~~~~~D~~ 59 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGAL---VALCDLRPEG----KEVAEA--------I--------GG-AFFQVDLE 59 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTH----HHHHHH--------H--------TC-EEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhH----HHHHHH--------h--------hC-CEEEeeCC
Confidence 45789999999999999999999999876 8888887542 111111 0 14 78899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 60 ~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 133 (256)
T 2d1y_A 60 DER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN 133 (256)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 444443 3789999999975321 3456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ......|..+|+..+.+.+.+
T Consensus 134 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 163 (256)
T 2d1y_A 134 VASVQGLFA------------EQENAAYNASKGGLVNLTRSL 163 (256)
T ss_dssp ECCGGGTSB------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EccccccCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 999865421 112456788888888776643
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.9e-14 Score=122.71 Aligned_cols=130 Identities=19% Similarity=0.181 Sum_probs=92.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|++|||||+|+||++++++|+++|++ |+++.|+.. ++++.... ...++.++.+|+++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~~ 60 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQ---VSMMGRRYQ------RLQQQELL------------LGNAVIGIVADLAH 60 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HGGGEEEEECCTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------hcCCceEEECCCCC
Confidence 4689999999999999999999999876 888888632 22221110 01368899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEEe
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
+. .+..++ .++|++|||||.... ...+...+++|+.| ++|++|
T Consensus 61 ~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~is 134 (235)
T 3l6e_A 61 HE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVL 134 (235)
T ss_dssp HH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 65 444443 378999999997532 24556678889888 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ...+..|..+|...+.+.+.+
T Consensus 135 S~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 162 (235)
T 3l6e_A 135 SSAAQVG------------KANESLYCASKWGMRGFLESL 162 (235)
T ss_dssp CEECCSS------------CSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHhcCC------------CCCCcHHHHHHHHHHHHHHHH
Confidence 9765432 223567888888887776643
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-14 Score=125.89 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=93.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 88 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGAR---VVLTARDVE---KLRAVEREIV------------AAGGEAESHACDLS 88 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------HhCCceeEEEecCC
Confidence 56899999999999999999999999876 888888632 1122222211 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+.+ .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 89 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 162 (262)
T 3rkr_A 89 HSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHII 162 (262)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEE
Confidence 865 444443 469999999997321 13456678888887 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... ...+..|..+|...+.+.+.+
T Consensus 163 ~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 193 (262)
T 3rkr_A 163 NISSLAGKNP------------VADGAAYTASKWGLNGLMTSA 193 (262)
T ss_dssp EECSSCSSCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 9999865421 223456777777777766543
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.4e-14 Score=123.71 Aligned_cols=129 Identities=16% Similarity=0.193 Sum_probs=91.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|.... ..+.+ .. .++.++.+|++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~--~~~~~----~~--------------~~~~~~~~Dv~ 81 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEHA--SVTEL----RQ--------------AGAVALYGDFS 81 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCCH--HHHHH----HH--------------HTCEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChHH--HHHHH----Hh--------------cCCeEEECCCC
Confidence 56899999999999999999999999977 8888887542 11111 11 24788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc------ccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD------ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~------~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||++
T Consensus 82 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~i 155 (260)
T 3gem_A 82 CET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHI 155 (260)
T ss_dssp SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 865 444444 3799999999975321 3455678889887 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ...+..|..+|...+.+.+.+
T Consensus 156 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 184 (260)
T 3gem_A 156 SDDVTRKG------------SSKHIAYCATKAGLESLTLSF 184 (260)
T ss_dssp CCGGGGTC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred CChhhcCC------------CCCcHhHHHHHHHHHHHHHHH
Confidence 99865432 113456777777777666543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.8e-14 Score=124.88 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=94.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. .....++.++.+|++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~---V~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~Dv~ 86 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGAN---IVLNGFGAP--DEIRTVTDEVA-----------GLSSGTVLHHPADMT 86 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEECCCCH--HHHHHHHHHHH-----------TTCSSCEEEECCCTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCh--HHHHHHHHHHh-----------hccCCcEEEEeCCCC
Confidence 56899999999999999999999999876 888888532 11122222111 011357899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 87 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 160 (281)
T 3v2h_A 87 KPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIIN 160 (281)
T ss_dssp CHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 875 454444 3799999999975321 3456678899988 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ......|..+|...+.+.+.+
T Consensus 161 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 190 (281)
T 3v2h_A 161 IASAHGLVA------------SPFKSAYVAAKHGIMGLTKTV 190 (281)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ECCcccccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 999866432 112346777777777766543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.4e-14 Score=125.92 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|.+ |+++.|... .+...+.+. ....++.++.+|++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~----~~~~~~~~~------------~~~~~~~~~~~Dv~ 89 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH---VLAWGRTDG----VKEVADEIA------------DGGGSAEAVVADLA 89 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTH----HHHHHHHHH------------TTTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCHHH----HHHHHHHHH------------hcCCcEEEEEecCC
Confidence 57899999999999999999999999876 777776532 112211111 12257889999999
Q ss_pred CCCCCCCHHHHHHHh------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+.+ .+..+. .++|++|||||.... ...+...+++|+.| +||++
T Consensus 90 d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~i 163 (273)
T 3uf0_A 90 DLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTI 163 (273)
T ss_dssp CHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 865 333332 379999999997642 13456678899888 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ......|..+|...+.+.+.+
T Consensus 164 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 192 (273)
T 3uf0_A 164 ASMLSFQG------------GRNVAAYAASKHAVVGLTRAL 192 (273)
T ss_dssp CCGGGTSC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred cchHhcCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 99866432 112446777777777666543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.3e-14 Score=121.76 Aligned_cols=133 Identities=16% Similarity=0.164 Sum_probs=92.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||++++++|+++|++ |+++.|+... .+.+.+.+ ......++.++.+|++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~~-----------~~~~~~~~~~~~~D~~~~ 64 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDR---VAALDLSAET---LEETARTH-----------WHAYADKVLRVRADVADE 64 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHH-----------STTTGGGEEEEECCTTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHH-----------HHhcCCcEEEEEecCCCH
Confidence 588999999999999999999999866 8888886321 11111111 001124688999999986
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCcccCcc----------ccHHHHhhccccc------------------eEE
Q psy14522 209 GLGLSAADRAVLRR-------NVTVVFHGAATVRFD----------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~----------~~~~~~~~~Nv~g------------------~~v 253 (298)
. .+..+++ ++|+||||||..... ..+...+++|+.| +||
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 138 (250)
T 2cfc_A 65 G------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIV 138 (250)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 5 4555543 799999999975321 2355667888866 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...+..|..+|+..+.+.+.+
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 169 (250)
T 2cfc_A 139 NIASVASLVA------------FPGRSAYTTSKGAVLQLTKSV 169 (250)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EECChhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 9999865432 113456888888888877654
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.1e-14 Score=122.99 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=91.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+ .....++.++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~------------~~~~~~~~~~~~Dv~ 65 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGAR---VVITGRTKEK---LEEAKLEI------------EQFPGQILTVQMDVR 65 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHH------------CCSTTCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHH------------HhcCCcEEEEEccCC
Confidence 56899999999999999999999999876 8888886321 11221111 122357899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 66 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv 139 (257)
T 3imf_A 66 NTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNII 139 (257)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 865 444443 379999999996432 13456677888877 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... ..+..|..+|...+.+.+.
T Consensus 140 ~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~ 169 (257)
T 3imf_A 140 NMVATYAWDAG------------PGVIHSAAAKAGVLAMTKT 169 (257)
T ss_dssp EECCGGGGSCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred EECchhhccCC------------CCcHHHHHHHHHHHHHHHH
Confidence 99998654321 1234566677766665543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.3e-15 Score=125.42 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=83.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||++++++|+++|++ |++++|+.. ++... ...+++++.+|++++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~------~~~~~---------------~~~~~~~~~~D~~d~~ 56 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHE---VLAVVRDPQ------KAADR---------------LGATVATLVKEPLVLT 56 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHH---------------TCTTSEEEECCGGGCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCE---EEEEEeccc------ccccc---------------cCCCceEEeccccccc
Confidence 57999999999999999999999876 999999632 11111 1157899999999987
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc-------------eEEEEeCCcccC---CC--CCccCcC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG-------------SFVHVSTAYTHC---PR--QEIDEVF 271 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g-------------~~v~iSS~~~~~---~~--~~~~E~~ 271 (298)
. ..++++|+|||+||....... ..+|+.+ +||++||+.+.. .. .+..|..
T Consensus 57 ------~--~~~~~~d~vi~~ag~~~~~~~----~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~ 124 (224)
T 3h2s_A 57 ------E--ADLDSVDAVVDALSVPWGSGR----GYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPE 124 (224)
T ss_dssp ------H--HHHTTCSEEEECCCCCTTSSC----THHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCG
T ss_pred ------H--hhcccCCEEEECCccCCCcch----hhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCC
Confidence 3 666899999999998521111 1122222 999999964322 11 1233333
Q ss_pred CCCCCChHHHHHHHHHHHHHH
Q psy14522 272 YPPPYDYKDFMELVMSRSDDN 292 (298)
Q Consensus 272 ~~~p~~~y~~yk~sK~~aE~~ 292 (298)
.+.| ...|..+|+.+|.+
T Consensus 125 ~~~~---~~~y~~sK~~~e~~ 142 (224)
T 3h2s_A 125 SAAS---QPWYDGALYQYYEY 142 (224)
T ss_dssp GGGG---STTHHHHHHHHHHH
T ss_pred CCcc---chhhHHHHHHHHHH
Confidence 2222 34477788888855
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-14 Score=124.46 Aligned_cols=137 Identities=12% Similarity=0.143 Sum_probs=92.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. . .....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~--------~-~~~~~~~~~~~~D~~ 68 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHAE---RLEETRQQILA--------A-GVSEQNVNSVVADVT 68 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH--------T-TCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHh--------c-ccCCCceeEEecccC
Confidence 46789999999999999999999999876 888888632 11111111100 0 011246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-----------cccHHHHhhccccc-----------------e
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-----------DENIKVAIAINIFG-----------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g-----------------~ 251 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 142 (278)
T 1spx_A 69 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGE 142 (278)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe
Confidence 865 5555544 89999999997531 23345667888877 8
Q ss_pred EEEEeCCcc-cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYT-HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~-~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||+.+ ... ...+..|..+|+..+.+.+.+
T Consensus 143 iv~isS~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 176 (278)
T 1spx_A 143 IVNISSIASGLHA------------TPDFPYYSIAKAAIDQYTRNT 176 (278)
T ss_dssp EEEECCTTSSSSC------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 999999865 321 123456788888888776643
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-14 Score=125.90 Aligned_cols=134 Identities=13% Similarity=0.132 Sum_probs=93.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|++.|.+ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv~ 63 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK---ILLGARRQA---RIEAIATEIR------------DAGGTALAQVLDVT 63 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 35789999999999999999999999876 888888632 1222222211 11257888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 64 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~ 137 (264)
T 3tfo_A 64 DRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIIN 137 (264)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 865 444443 3799999999975321 3456678889888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 138 isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 167 (264)
T 3tfo_A 138 IGSIGALSV------------VPTAAVYCATKFAVRAISDGL 167 (264)
T ss_dssp ECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EcCHHHccc------------CCCChhHHHHHHHHHHHHHHH
Confidence 999866432 122356777777777665543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-14 Score=125.72 Aligned_cols=134 Identities=13% Similarity=0.127 Sum_probs=93.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~---V~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~ 88 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK---VAVNYASSA--GAADEVVAAIA------------AAGGEAFAVKADVS 88 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCCh--HHHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 56899999999999999999999999876 777777432 11222222221 11357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...++..+++|+.| +||+
T Consensus 89 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 162 (269)
T 4dmm_A 89 QES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIIN 162 (269)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4444443 79999999997632 14556678899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|...+.+.+.
T Consensus 163 isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~ 191 (269)
T 4dmm_A 163 IASVVGEMG------------NPGQANYSAAKAGVIGLTKT 191 (269)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred ECchhhcCC------------CCCchhHHHHHHHHHHHHHH
Confidence 999865421 11234677777766666543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.7e-14 Score=126.18 Aligned_cols=134 Identities=16% Similarity=0.128 Sum_probs=95.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|++.|++ |++++|... ..+.+.+.+. ....++.++.+|++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dl~ 90 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK---LVLWDINKH---GLEETAAKCK------------GLGAKVHTFVVDCS 90 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEEcCHH---HHHHHHHHHH------------hcCCeEEEEEeeCC
Confidence 56899999999999999999999999876 888888632 1112211111 11257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|+||||||..... ..+...+++|+.| +||+
T Consensus 91 ~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~ 164 (272)
T 1yb1_A 91 NRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVT 164 (272)
T ss_dssp CHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 444443 3799999999975421 2345667888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.. +...+..|..+|+..+.+.+.+
T Consensus 165 isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 165 VASAAGHV------------SVPFLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp ECCCC-CC------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhcC------------CCCCchhHHHHHHHHHHHHHHH
Confidence 99986542 1234677889999888877654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.9e-14 Score=124.64 Aligned_cols=130 Identities=18% Similarity=0.122 Sum_probs=93.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 85 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCH---VLCADIDGD------AADAAAT------------KIGCGAAACRVDVS 85 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH------------HHCSSCEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HcCCcceEEEecCC
Confidence 56899999999999999999999999876 888888632 2222111 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 86 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~ 159 (277)
T 3gvc_A 86 DEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVN 159 (277)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 444443 379999999997532 13456678889888 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|...+.+.+.
T Consensus 160 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 188 (277)
T 3gvc_A 160 LSSLAGQVA------------VGGTGAYGMSKAGIIQLSRI 188 (277)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred EcchhhccC------------CCCchhHHHHHHHHHHHHHH
Confidence 999865432 22345677778877776654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.9e-14 Score=127.37 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=93.9
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|+++|++ |+++.|... ..+.+.+.+.. ...++.++.+|+
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~~------------~~~~~~~~~~Dv 86 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAM---VIGTATTEA---GAEGIGAAFKQ------------AGLEGRGAVLNV 86 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHHH------------HTCCCEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHh------------cCCcEEEEEEeC
Confidence 357899999999999999999999999876 888888632 12222222211 124778899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++.. .+..+++ ++|++|||||.... ...+...+++|+.| +||
T Consensus 87 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 160 (270)
T 3ftp_A 87 NDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIV 160 (270)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9865 4444443 79999999997532 14566778899988 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|...+.+.+.
T Consensus 161 ~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 190 (270)
T 3ftp_A 161 NITSVVGSAG------------NPGQVNYAAAKAGVAGMTRA 190 (270)
T ss_dssp EECCHHHHHC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred EECchhhCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 9999865421 11245677777766666554
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-14 Score=124.66 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=91.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||++++++|++.|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~--~~~~~~~~~l~------------~~~~~~~~~~~D~~ 67 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAK---VVVNYRSKE--DEANSVLEEIK------------KVGGEAIAVKGDVT 67 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEcCCCh--HHHHHHHHHHH------------hcCCceEEEECCCC
Confidence 46789999999999999999999999876 888888321 11112211111 11246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|+||||||..... ..+...+++|+.| +||
T Consensus 68 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv 141 (261)
T 1gee_A 68 VES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVI 141 (261)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 865 4544443 799999999975321 3345566777766 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+.. +..++..|..+|...+.+.+.+
T Consensus 142 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l 172 (261)
T 1gee_A 142 NMSSVHEKI------------PWPLFVHYAASKGGMKLMTETL 172 (261)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred EeCCHHhcC------------CCCCccHHHHHHHHHHHHHHHH
Confidence 999976542 1223456777887777766543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.7e-14 Score=122.22 Aligned_cols=134 Identities=18% Similarity=0.242 Sum_probs=93.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+|+||++++++|+++|++ +|+++.|+... ...+.+.+. . ...++.++.+|++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~-~~~~~l~~~------------~--~~~~~~~~~~D~~ 65 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP-TALAELKAI------------N--PKVNITFHTYDVT 65 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH-HHHHHHHHH------------C--TTSEEEEEECCTT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH-HHHHHHHHh------------C--CCceEEEEEEecC
Confidence 45789999999999999999999999863 37778886531 111222111 0 0246889999999
Q ss_pred CC-CCCCCHHHHHHHh-------cCccEEEEcCcccCccccHHHHhhccccc---------------------eEEEEeC
Q psy14522 207 LP-GLGLSAADRAVLR-------RNVTVVFHGAATVRFDENIKVAIAINIFG---------------------SFVHVST 257 (298)
Q Consensus 207 ~~-~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------------~~v~iSS 257 (298)
++ . .+..++ .++|++|||||... ...+...+++|+.| +||++||
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 138 (254)
T 1sby_A 66 VPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp SCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence 86 4 343333 37999999999754 35677777888777 3999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+... ......|..+|+..+.+.+.+
T Consensus 139 ~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 165 (254)
T 1sby_A 139 VTGFNA------------IHQVPVYSASKAAVVSFTNSL 165 (254)
T ss_dssp GGGTSC------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred hhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 866432 122456888888888776653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=9.1e-14 Score=122.35 Aligned_cols=134 Identities=19% Similarity=0.183 Sum_probs=94.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~Dv 69 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGAD---LVLAARTVE---RLEDVAKQVT------------DTGRRALSVGTDI 69 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCT
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEEcCC
Confidence 357899999999999999999999999876 888888632 1122222111 1135789999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~v 253 (298)
+++. .+..++ .++|++|||||..... ..+...+++|+.| +||
T Consensus 70 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv 143 (264)
T 3ucx_A 70 TDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVV 143 (264)
T ss_dssp TCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEE
Confidence 9875 444444 3789999999874211 3456678889887 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|...+.+.+.
T Consensus 144 ~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 173 (264)
T 3ucx_A 144 NVNSMVVRHS------------QAKYGAYKMAKSALLAMSQT 173 (264)
T ss_dssp EECCGGGGCC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EECcchhccC------------CCccHHHHHHHHHHHHHHHH
Confidence 9999865432 22345677777777766554
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-14 Score=124.74 Aligned_cols=135 Identities=15% Similarity=0.140 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. ....++.++.+|++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~-----------~~~~~~~~~~~D~~ 67 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGST---VIITGTSGE---RAKAVAEEIAN-----------KYGVKAHGVEMNLL 67 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCChH---HHHHHHHHHHh-----------hcCCceEEEEccCC
Confidence 45789999999999999999999999876 888888632 11122111110 01247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|+||||||..... ..+...+++|+.| +||+
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~ 141 (248)
T 2pnf_A 68 SEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVN 141 (248)
T ss_dssp CHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 5555554 799999999975421 3455677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... ..+..|..+|...+.+.+.+
T Consensus 142 ~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 142 ISSVVGFTGN------------VGQVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp ECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred EccHHhcCCC------------CCCchHHHHHHHHHHHHHHH
Confidence 9997543211 12345777788777776543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.3e-14 Score=130.98 Aligned_cols=131 Identities=21% Similarity=0.129 Sum_probs=93.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCC--CcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACP--HLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~--~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+|+|||||||||||++++++|+++|. .+.+|++++|...... ....+++++.+|++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------------------~~~~~~~~~~~Dl~ 58 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------------------HEDNPINYVQCDIS 58 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------------------CCSSCCEEEECCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------------------cccCceEEEEeecC
Confidence 47899999999999999999999971 0124999999754321 01147889999999
Q ss_pred CCCCCCCHHHHHHHhcC---ccEEEEcCcccCccccHHHHhhccccc----------------eEE-------EEeCCcc
Q psy14522 207 LPGLGLSAADRAVLRRN---VTVVFHGAATVRFDENIKVAIAINIFG----------------SFV-------HVSTAYT 260 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~---vd~Vih~A~~~~~~~~~~~~~~~Nv~g----------------~~v-------~iSS~~~ 260 (298)
++. .+..++++ +|+|||+||... .+....+++|+.| +|| |+||.++
T Consensus 59 d~~------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v 130 (364)
T 2v6g_A 59 DPD------DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES 130 (364)
T ss_dssp SHH------HHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG
T ss_pred CHH------HHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh
Confidence 865 78888887 999999999763 3455566677666 565 7888754
Q ss_pred cCC----CCCccCcCCCCC-CChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HCP----RQEIDEVFYPPP-YDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~~----~~~~~E~~~~~p-~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++. ..+++|+.+..| .++| +.+|+++.+.
T Consensus 131 yg~~~~~~~~~~E~~~~~~~~~~y-------~~~E~~~~~~ 164 (364)
T 2v6g_A 131 YGKIESHDPPYTEDLPRLKYMNFY-------YDLEDIMLEE 164 (364)
T ss_dssp TTTSCCCCSSBCTTSCCCSSCCHH-------HHHHHHHHHH
T ss_pred ccccccCCCCCCccccCCccchhh-------HHHHHHHHHH
Confidence 432 356788876554 4555 2366666543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=123.14 Aligned_cols=140 Identities=16% Similarity=0.106 Sum_probs=95.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc----------chhHHHHHHHHHHHHhhhhhcCcccc
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK----------TVSERLDELFEDRLFSRLKAEVPHFR 195 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~----------~~~~rl~~~~~~~~~~~l~~~~~~~~ 195 (298)
.+.+|+++||||+|+||+++++.|+++|++ |++++|+.... ...+++.+.... + ....
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~ 75 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGAD---IIAVDICKPIRAGVVDTAIPASTPEDLAETADL-----V----KGHN 75 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHH-----H----HTTT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeccccccccccccccccCCHHHHHHHHHH-----H----hhcC
Confidence 357899999999999999999999999876 88888763211 012233222111 0 1123
Q ss_pred CCeEEEecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc----------
Q psy14522 196 SKISVVTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG---------- 250 (298)
Q Consensus 196 ~~v~~v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g---------- 250 (298)
.++.++.+|+++++ .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 76 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 149 (286)
T 3uve_A 76 RRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP 149 (286)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57899999999875 454443 3799999999975321 3456678889888
Q ss_pred ---------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ---------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ---------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|...+.+.+.
T Consensus 150 ~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 191 (286)
T 3uve_A 150 HMIAGGRGGSIILTSSVGGLKA------------YPHTGHYVAAKHGVVGLMRA 191 (286)
T ss_dssp HHHHHTSCEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEECchhhccC------------CCCccHHHHHHHHHHHHHHH
Confidence 7999999866422 12244677777776666554
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.5e-14 Score=124.40 Aligned_cols=133 Identities=10% Similarity=0.050 Sum_probs=93.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 64 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGAT---VVGTATSQA---SAEKFENSMK------------EKGFKARGLVLNIS 64 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCceEEEEecCC
Confidence 45799999999999999999999999876 888888632 1222222221 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 138 (247)
T 3lyl_A 65 DIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIIS 138 (247)
T ss_dssp CHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 865 4444433 68999999997632 13456678888887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+... ...+..|..+|...+.+.+.
T Consensus 139 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 167 (247)
T 3lyl_A 139 IGSVVGSAG------------NPGQTNYCAAKAGVIGFSKS 167 (247)
T ss_dssp ECCTHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EcchhhccC------------CCCcHHHHHHHHHHHHHHHH
Confidence 999865422 11245677777766666554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=7.4e-14 Score=122.24 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... +...++.++.+|++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 61 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGAR---VVLADVLDE------EGAATAR------------ELGDAARYQHLDVT 61 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TTGGGEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceeEEEecCC
Confidence 46799999999999999999999999876 888888632 2222111 11246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 62 ~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 135 (254)
T 1hdc_A 62 IEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN 135 (254)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 865 4555444 79999999997532 13456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 136 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 165 (254)
T 1hdc_A 136 ISSAAGLMG------------LALTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ECchhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 999866432 112456777788777776543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=121.42 Aligned_cols=134 Identities=17% Similarity=0.178 Sum_probs=93.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+++.+.+. ....++.++.+|++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 73 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAH---VVVSSRKQEN---VDRTVATLQ------------GEGLSVTGTVCHVG 73 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEEccCC
Confidence 46899999999999999999999999876 8888886321 111111111 11246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 74 ~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv 147 (260)
T 2zat_A 74 KAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVL 147 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 865 444443 379999999996431 13455677888877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ......|..+|...+.+.+.+
T Consensus 148 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 148 IVSSVGAYHP------------FPNLGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp EECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 9999866532 123456777888877776644
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=8.9e-14 Score=121.20 Aligned_cols=133 Identities=14% Similarity=0.161 Sum_probs=91.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv~ 66 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAA---VAIAARRVE---KLRALGDELT------------AAGAKVHVLELDVA 66 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 56899999999999999999999999876 888888632 1122221111 11247889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~i 255 (298)
+++ .+..++ .++|++|||||..... ..+...+++|+.| +||++
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~i 140 (247)
T 2jah_A 67 DRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQM 140 (247)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 865 444443 3799999999975321 3456677888887 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+... ...+..|..+|+..+.+.+.
T Consensus 141 sS~~~~~~------------~~~~~~Y~asK~a~~~~~~~ 168 (247)
T 2jah_A 141 SSIAGRVN------------VRNAAVYQATKFGVNAFSET 168 (247)
T ss_dssp CCGGGTCC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred ccHHhcCC------------CCCCcHHHHHHHHHHHHHHH
Confidence 99866432 11234577777766666543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=9.8e-14 Score=120.11 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|... ++.+.... ..+++++.+|++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 62 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTNS------DLVSLAKE-------------CPGIEPVCVDLG 62 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh-------------ccCCCcEEecCC
Confidence 46789999999999999999999999876 888888632 22211110 135677899999
Q ss_pred CCCCCCCHHHHHHHhc---CccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVLRR---NVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~iSS 257 (298)
++. .+..+++ ++|+||||||.... ...+...+++|+.| +||++||
T Consensus 63 ~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS 136 (244)
T 1cyd_A 63 DWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136 (244)
T ss_dssp CHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CHH------HHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence 865 6777665 58999999996532 13445567777776 5999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+... ......|..+|+..|.+.+.+
T Consensus 137 ~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 163 (244)
T 1cyd_A 137 MVAHVT------------FPNLITYSSTKGAMTMLTKAM 163 (244)
T ss_dssp GGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred hhhcCC------------CCCcchhHHHHHHHHHHHHHH
Confidence 865432 112456888888888887654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.7e-14 Score=123.55 Aligned_cols=131 Identities=20% Similarity=0.147 Sum_probs=92.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|.+ |+++.|+.. ++++... +...++.++.+|++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 84 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYG---VALAGRRLD------ALQETAA------------EIGDDALCVPTDVT 84 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHTSCCEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhCCCeEEEEecCC
Confidence 46899999999999999999999999876 888888632 2222211 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc--------------------e
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG--------------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g--------------------~ 251 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +
T Consensus 85 d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~ 158 (272)
T 4dyv_A 85 DPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGR 158 (272)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcE
Confidence 875 4554443 79999999997532 13456678888877 6
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 159 IV~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 191 (272)
T 4dyv_A 159 IINNGSISATSP------------RPYSAPYTATKHAITGLTKST 191 (272)
T ss_dssp EEEECCSSTTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEECchhhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 999999866532 123456777777777776543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.5e-14 Score=123.22 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=93.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++.... ...++.++.+|++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv~ 64 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAE---VLLTGRNES------NIARIREE------------FGPRVHALRSDIA 64 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HGGGEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCcceEEEccCC
Confidence 46899999999999999999999999876 888888632 22221111 1257889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
++. .+..+ ..++|++|||||.... ...+...+++|+.| +||++|
T Consensus 65 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 65 DLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp CHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 865 44433 3479999999997542 23456678889887 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+... ...+..|..+|...+.+.+.+
T Consensus 139 S~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 166 (255)
T 4eso_A 139 SVADEGG------------HPGMSVYSASKAALVSFASVL 166 (255)
T ss_dssp CGGGSSB------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCC------------CCCchHHHHHHHHHHHHHHHH
Confidence 9865432 123456777777777666543
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-14 Score=122.11 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=92.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC-CCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP-KKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|. ... .+.+.+.+. ....++.++.+|+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~~D~ 66 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAK---VGLHGRKAPAN---IDETIASMR------------ADGGDAAFFAADL 66 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCCTT---HHHHHHHHH------------HTTCEEEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEECCCchhh---HHHHHHHHH------------hcCCceEEEECCC
Confidence 46899999999999999999999999876 8888887 332 122222111 0125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcc-cCcc-------ccHHHHhhcccc---------------------
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAAT-VRFD-------ENIKVAIAINIF--------------------- 249 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~-~~~~-------~~~~~~~~~Nv~--------------------- 249 (298)
+++. .+..+++ ++|+||||||. .... ..+...+++|+.
T Consensus 67 ~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 140 (258)
T 3afn_B 67 ATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASG 140 (258)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCC
Confidence 9865 5555554 79999999996 3211 224445566654
Q ss_pred --ceEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 250 --GSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 250 --g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||++||+++... +..+...|..+|+..|.+.+.+
T Consensus 141 ~~~~iv~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~~ 178 (258)
T 3afn_B 141 QTSAVISTGSIAGHTG-----------GGPGAGLYGAAKAFLHNVHKNW 178 (258)
T ss_dssp SCEEEEEECCTHHHHC-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecchhhccC-----------CCCCchHHHHHHHHHHHHHHHH
Confidence 36899999866431 1113456788888888876643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=8.3e-14 Score=125.05 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=94.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|+++|++ |++++|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv~ 90 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGAR---LVLSDVDQP---ALEQAVNGLR------------GQGFDAHGVVCDVR 90 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCceEEEEccCC
Confidence 56899999999999999999999999876 888888632 1122222111 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+.+ .+..+++ ++|++|||||.... ...+...+++|+.| +||
T Consensus 91 d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv 164 (301)
T 3tjr_A 91 HLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIA 164 (301)
T ss_dssp CHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 4544443 79999999997532 13456678888887 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|...+.+.+.
T Consensus 165 ~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 194 (301)
T 3tjr_A 165 FTASFAGLVP------------NAGLGTYGVAKYGVVGLAET 194 (301)
T ss_dssp EECCGGGTSC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred EeCchhhcCC------------CCCchHHHHHHHHHHHHHHH
Confidence 9999866532 22345677778777666554
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=6.7e-14 Score=122.87 Aligned_cols=133 Identities=17% Similarity=0.171 Sum_probs=92.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
++|++|||||+|+||+++++.|+++|++ |++. .|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~---vv~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~Dv~ 64 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN---IVINYARSKK---AALETAEEIE------------KLGVKVLVVKANVG 64 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHH------------TTTCCEEEEECCTT
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 5789999999999999999999999876 6665 66532 1122222111 12357899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 65 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 138 (258)
T 3oid_A 65 QPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVS 138 (258)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 444443 468999999996432 13456678889877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 139 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 168 (258)
T 3oid_A 139 ISSLGSIRY------------LENYTTVGVSKAALEALTRYL 168 (258)
T ss_dssp EEEGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ECchhhCCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 999865421 223456777888777776543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.50 E-value=6.9e-14 Score=122.07 Aligned_cols=124 Identities=17% Similarity=0.176 Sum_probs=92.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... . ..+.++.+|++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~-----------------------~--~~~~~~~~D~~ 56 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAK---VTGFDQAFTQE-----------------------Q--YPFATEVMDVA 56 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCCCSS-----------------------C--CSSEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCchhhh-----------------------c--CCceEEEcCCC
Confidence 45789999999999999999999999876 88888874310 0 13778899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 57 d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 130 (250)
T 2fwm_X 57 DAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVT 130 (250)
T ss_dssp CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 5555543 79999999997532 13456678888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ...+..|..+|...+.+.+.+
T Consensus 131 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 160 (250)
T 2fwm_X 131 VASDAAHTP------------RIGMSAYGASKAALKSLALSV 160 (250)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ECchhhCCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 999866421 123456778888887776643
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.2e-14 Score=124.88 Aligned_cols=135 Identities=19% Similarity=0.189 Sum_probs=95.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||++++++|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~ 89 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLK---VWINYRSNA--EVADALKNELE------------EKGYKAAVIKFDAA 89 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hcCCceEEEECCCC
Confidence 56899999999999999999999999876 888888532 11222222221 12257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 90 ~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 163 (271)
T 4iin_A 90 SES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVN 163 (271)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 865 444443 3799999999975422 3456678889887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 164 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 193 (271)
T 4iin_A 164 VASIIGERG------------NMGQTNYSASKGGMIAMSKSF 193 (271)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EechhhcCC------------CCCchHhHHHHHHHHHHHHHH
Confidence 999865421 123456777788777776543
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.6e-14 Score=123.55 Aligned_cols=135 Identities=13% Similarity=0.110 Sum_probs=93.2
Q ss_pred hcCceeeecCCCCC--CchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF--MGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~--iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+|+ ||+++++.|+++|++ |+++.|.... .+.+.+.... ....++.++.+|
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~D 67 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR---LIFTYAGERL---EKSVHELAGT-----------LDRNDSIILPCD 67 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHHT-----------SSSCCCEEEECC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEecCchHH---HHHHHHHHHh-----------cCCCCceEEeCC
Confidence 46899999999987 999999999999876 8888886322 2222222211 011378999999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
++++. .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 68 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g 141 (266)
T 3oig_A 68 VTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGG 141 (266)
T ss_dssp CSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCE
T ss_pred CCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCc
Confidence 99876 444443 378999999997531 12345567788877
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 142 ~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 175 (266)
T 3oig_A 142 SIVTLTYLGGELV------------MPNYNVMGVAKASLDASVKYL 175 (266)
T ss_dssp EEEEEECGGGTSC------------CTTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccccccc------------CCCcchhHHHHHHHHHHHHHH
Confidence 8999999866432 223456777777777766543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=120.95 Aligned_cols=128 Identities=18% Similarity=0.220 Sum_probs=91.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... +...++.++.+|++++.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~~~~ 59 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQE------RLQELKD------------ELGDNLYIAQLDVRNRA 59 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCTTEEEEECCTTCHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhcCceEEEEcCCCCHH
Confidence 57999999999999999999999876 888888632 2222111 01147889999999875
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCcccC----c----cccHHHHhhccccc------------------eEEEEe
Q psy14522 210 LGLSAADRAVLRR-------NVTVVFHGAATVR----F----DENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l~~-------~vd~Vih~A~~~~----~----~~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
.+..+++ ++|++|||||... + ...+...+++|+.| +||++|
T Consensus 60 ------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~is 133 (248)
T 3asu_A 60 ------AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_dssp ------HHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 5666654 6899999999652 1 13456678888877 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+... ......|..+|+..+.+.+.+
T Consensus 134 S~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 161 (248)
T 3asu_A 134 STAGSWP------------YAGGNVYGATKAFVRQFSLNL 161 (248)
T ss_dssp CGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred cchhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 9865422 122456788888888776543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.5e-14 Score=125.65 Aligned_cols=135 Identities=13% Similarity=0.176 Sum_probs=94.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... ..+.+.+... ....++.++.+|++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dv~ 107 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGAN---IAIAYLDEEG--DANETKQYVE------------KEGVKCVLLPGDLS 107 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHH------------TTTCCEEEEESCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 56899999999999999999999999876 8888886431 1122222111 12357899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~i 255 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||++
T Consensus 108 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 108 DEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp SHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 865 444443 379999999997532 13456778899988 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ......|..+|...+.+.+.+
T Consensus 182 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 210 (291)
T 3ijr_A 182 ASIVAYEG------------NETLIDYSATKGAIVAFTRSL 210 (291)
T ss_dssp CCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred echHhcCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 99865422 112346777777777766543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=124.67 Aligned_cols=135 Identities=13% Similarity=0.119 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. . ....++.++.+|++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~--------~--~~~~~~~~~~~D~~ 74 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAK---LSLVDVSSEG---LEASKAAVLE--------T--APDAEVLTTVADVS 74 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH--------H--CTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh--------h--cCCceEEEEEccCC
Confidence 56899999999999999999999999876 8888886321 1111111110 0 00257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ .+..+++ ++|++|||||.... ...++..+++|+.| +||
T Consensus 75 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 148 (267)
T 1iy8_A 75 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV 148 (267)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 865 4544443 78999999997533 13456677888876 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|...+.+.+.
T Consensus 149 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~ 178 (267)
T 1iy8_A 149 NTASVGGIRG------------IGNQSGYAAAKHGVVGLTRN 178 (267)
T ss_dssp EECCGGGTSB------------CSSBHHHHHHHHHHHHHHHH
T ss_pred EEcchhhccC------------CCCCccHHHHHHHHHHHHHH
Confidence 9999865421 11245677778877776654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.7e-14 Score=124.73 Aligned_cols=131 Identities=18% Similarity=0.139 Sum_probs=94.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... +...+. ...++.++.+|++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~---~~~~~~---------------~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGAR---VVLADLPETDL---AGAAAS---------------VGRGAVHHVVDLT 67 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSCH---HHHHHH---------------HCTTCEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEcCCHHHH---HHHHHH---------------hCCCeEEEECCCC
Confidence 56899999999999999999999999876 88888875421 111111 1257888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc---------cccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF---------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g------------------~~ 252 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +|
T Consensus 68 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 141 (271)
T 3tzq_B 68 NEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAI 141 (271)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 875 4555444 79999999997622 13456678889887 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... ...+..|..+|...+.+.+.+
T Consensus 142 v~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 173 (271)
T 3tzq_B 142 VNISSATAHAA------------YDMSTAYACTKAAIETLTRYV 173 (271)
T ss_dssp EEECCGGGTSB------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred EEECCHHHcCC------------CCCChHHHHHHHHHHHHHHHH
Confidence 99999865422 122456777777777766543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=8.4e-14 Score=121.45 Aligned_cols=132 Identities=13% Similarity=0.174 Sum_probs=93.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... ++.+.+. ....++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~-----~~~~~~~------------~~~~~~~~~~~Dv~ 64 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPAP-----EAEAAIR------------NLGRRVLTVKCDVS 64 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCH-----HHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCchh-----HHHHHHH------------hcCCcEEEEEeecC
Confidence 46789999999999999999999999876 8888887521 1211111 11257889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+ +.++|++|||||.... ...+...+++|+.| +||+
T Consensus 65 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 138 (249)
T 2ew8_A 65 QPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIIN 138 (249)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 865 44444 3479999999997532 13455677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ...+..|..+|...+.+.+.+
T Consensus 139 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 168 (249)
T 2ew8_A 139 LTSTTYWLK------------IEAYTHYISTKAANIGFTRAL 168 (249)
T ss_dssp ECCGGGGSC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred EcchhhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 999866532 112456777888777776543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=119.57 Aligned_cols=130 Identities=18% Similarity=0.176 Sum_probs=93.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|++ |+++.|+.. ++++.... ..++.++.+|++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 62 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQA------DLDSLVRE-------------CPGIEPVCVDLG 62 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-------------cCCCCEEEEeCC
Confidence 46789999999999999999999999876 888888632 22221110 125677899999
Q ss_pred CCCCCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iSS 257 (298)
++. .+..+++ ++|+||||||..... ..+...+++|+.| +||++||
T Consensus 63 ~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 136 (244)
T 3d3w_A 63 DWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136 (244)
T ss_dssp CHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CHH------HHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence 875 6777665 589999999975321 3445667788776 6999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+... ...+..|..+|+..|.+.+.+
T Consensus 137 ~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 163 (244)
T 3d3w_A 137 QCSQRA------------VTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp GGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred hhhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 865432 123467888899888887654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.50 E-value=3.2e-14 Score=123.15 Aligned_cols=131 Identities=19% Similarity=0.227 Sum_probs=89.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEE-ecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYL-LVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~-l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+|+|+||||+|+||++++++|+++|++ |++ ..|+.. ..+.+.+.+.. ...++.++.+|+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~---v~~~~~r~~~---~~~~~~~~~~~------------~~~~~~~~~~D~~~ 62 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSAK---AAEEVSKQIEA------------YGGQAITFGGDVSK 62 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHHH------------HTCEEEEEECCTTS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHHHh------------cCCcEEEEeCCCCC
Confidence 478999999999999999999999876 777 467532 11222211110 12468889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 63 ~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 136 (244)
T 1edo_A 63 EA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI 136 (244)
T ss_dssp HH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 65 5555544 79999999997542 13455677888877 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+.... + ....|..+|...+.+.+.
T Consensus 137 sS~~~~~~~---------~---~~~~Y~~sK~a~~~~~~~ 164 (244)
T 1edo_A 137 ASVVGLIGN---------I---GQANYAAAKAGVIGFSKT 164 (244)
T ss_dssp CCTHHHHCC---------T---TCHHHHHHHHHHHHHHHH
T ss_pred CChhhcCCC---------C---CCccchhhHHHHHHHHHH
Confidence 998553211 1 234577777776666554
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=5e-14 Score=124.31 Aligned_cols=136 Identities=17% Similarity=0.206 Sum_probs=93.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. ....++.++.+|+
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~Dl 80 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLEE---ASEAAQKLTE-----------KYGVETMAFRCDV 80 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHCCCEEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHH-----------hcCCeEEEEEcCC
Confidence 357899999999999999999999999876 8888886321 1111111100 0124688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..++ .++|++|||||..... ..+...+++|+.| +||
T Consensus 81 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 154 (267)
T 1vl8_A 81 SNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSII 154 (267)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 444443 3799999999975321 3455677888876 899
Q ss_pred EEeCCc-ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAY-THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~-~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+. +... ...+..|..+|...+.+.+.+
T Consensus 155 ~isS~~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 186 (267)
T 1vl8_A 155 NIGSLTVEEVT------------MPNISAYAASKGGVASLTKAL 186 (267)
T ss_dssp EECCGGGTCCC------------SSSCHHHHHHHHHHHHHHHHH
T ss_pred EECCcchhccC------------CCCChhHHHHHHHHHHHHHHH
Confidence 999986 3311 112456778888888776543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-14 Score=124.91 Aligned_cols=130 Identities=16% Similarity=0.032 Sum_probs=91.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+||||||+||||+++++.|+++|++ |++++|+..... . .+.+|++++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-------------------------~---~~~~D~~~~~ 50 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHT---VIGIDRGQADIE-------------------------A---DLSTPGGRET 50 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSEE-------------------------C---CTTSHHHHHH
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEeCChhHcc-------------------------c---cccCCcccHH
Confidence 57999999999999999999999876 899998754210 1 1456776644
Q ss_pred CCCCHHHHHHHhc----CccEEEEcCcccCccccHHHHhhccccc------------------eEEEEeCCcccCCCC--
Q psy14522 210 LGLSAADRAVLRR----NVTVVFHGAATVRFDENIKVAIAINIFG------------------SFVHVSTAYTHCPRQ-- 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~----~vd~Vih~A~~~~~~~~~~~~~~~Nv~g------------------~~v~iSS~~~~~~~~-- 265 (298)
.+..+++ ++|+||||||......++...+++|+.| +||++||..+.....
T Consensus 51 ------~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~ 124 (255)
T 2dkn_A 51 ------AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE 124 (255)
T ss_dssp ------HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG
T ss_pred ------HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc
Confidence 5555554 8999999999866456677788888877 799999986654321
Q ss_pred -CccC-------cCCC----CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 -EIDE-------VFYP----PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 -~~~E-------~~~~----~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+..| +.+. .+..+...|..+|+..|.+++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~ 167 (255)
T 2dkn_A 125 LPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRN 167 (255)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHH
Confidence 1111 0000 00135678999999999987754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.50 E-value=9.7e-14 Score=121.62 Aligned_cols=131 Identities=14% Similarity=0.207 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||++++++|+++|++ |+++.|+.. ++++... +...++.++.+|++
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAK---VVIVDRDKA------GAERVAG------------EIGDAALAVAADIS 65 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence 46899999999999999999999999876 888888632 2222111 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc---------------------
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG--------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g--------------------- 250 (298)
+.. .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 66 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 139 (261)
T 3n74_A 66 KEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQE 139 (261)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 865 4444443 78999999997541 13455678889888
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+... ...+..|..+|...+.+.+.+
T Consensus 140 ~~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 174 (261)
T 3n74_A 140 CVILNVASTGAGRP------------RPNLAWYNATKGWVVSVTKAL 174 (261)
T ss_dssp EEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCchhhcCC------------CCCccHHHHHHHHHHHHHHHH
Confidence 2999999865421 223445777777777766543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-14 Score=123.00 Aligned_cols=133 Identities=15% Similarity=0.164 Sum_probs=91.2
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+ |+||+++++.|+++|++ |+++.|+.. ..+.+.+.... .....++.+|
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D 67 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQCD 67 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTT---THHHHHHHHHH-------------TTCCCEEECC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEcCcHH---HHHHHHHHHHh-------------cCCcEEEEcc
Confidence 457899999999 99999999999999876 888888752 12222221110 0234788999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc------------cccHHHHhhccccc---------------
Q psy14522 205 VSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF------------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g--------------- 250 (298)
+++++ .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 68 ~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 141 (265)
T 1qsg_A 68 VAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 141 (265)
T ss_dssp TTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 99865 4555443 68999999997531 12445677888887
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 142 g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 176 (265)
T 1qsg_A 142 SALLTLSYLGAERA------------IPNYNVMGLAKASLEANVRYM 176 (265)
T ss_dssp EEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcchhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 7999999765421 112345777777777776543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=8e-15 Score=124.27 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=90.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+||||||+||++++++|+++|+ ..+|++++|+.... ..+++++.+|+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------~~~~~~~~~D~~~ 57 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------HPRLDNPVGPLAE 57 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------CTTEECCBSCHHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------CCCceEEeccccC
Confidence 367999999999999999999999986 12499999975420 1467888899887
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFY 272 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~ 272 (298)
+. .+..++ +|+|||+|+.... ..++..++++|+.+ +|||+||..+...
T Consensus 58 ~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------- 120 (215)
T 2a35_A 58 LL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------- 120 (215)
T ss_dssp HG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT---------
T ss_pred HH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC---------
Confidence 54 344444 8999999997542 24566677777776 8999999866531
Q ss_pred CCCCChHHHHHHHHHHHHHHHhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|. ..|..+|+.+|++++.
T Consensus 121 --~~---~~y~~sK~~~e~~~~~ 138 (215)
T 2a35_A 121 --SS---IFYNRVKGELEQALQE 138 (215)
T ss_dssp --CS---SHHHHHHHHHHHHHTT
T ss_pred --Cc---cHHHHHHHHHHHHHHH
Confidence 22 3577889999999875
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=6e-14 Score=122.59 Aligned_cols=136 Identities=14% Similarity=0.092 Sum_probs=89.9
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
....+|+||||||+|+||++++++|+++|++ |+++.+.... . .+...+.+. ....++.++.+|
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~---v~~~~~~~~~-~-~~~~~~~~~------------~~~~~~~~~~~D 71 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFR---VVAGCGPNSP-R-RVKWLEDQK------------ALGFDFYASEGN 71 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEE---EEEEECTTCS-S-HHHHHHHHH------------HTTCCCEEEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHH-H-HHHHHHHHH------------hcCCeeEEEecC
Confidence 3457899999999999999999999999866 7776643221 1 111111111 112578899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eE
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~ 252 (298)
+++.+ .+..++ .++|++|||||.... ...+...+++|+.| +|
T Consensus 72 v~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 145 (256)
T 3ezl_A 72 VGDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRI 145 (256)
T ss_dssp TTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 99865 444443 378999999997542 13456678889888 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+... ...+..|..+|...+.+.+.
T Consensus 146 v~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~ 176 (256)
T 3ezl_A 146 INISSVNGQKG------------QFGQTNYSTAKAGIHGFTMS 176 (256)
T ss_dssp EEECCCCGGGS------------CSCCHHHHHHHHHHHHHHHH
T ss_pred EEEcchhhccC------------CCCCcccHHHHHHHHHHHHH
Confidence 99999865422 11234577777766666543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=123.32 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=94.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~Dv~ 67 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAK---VVVTARNGN---ALAELTDEIA------------GGGGEAAALAGDVG 67 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECCSCHH---HHHHHHHHHT------------TTTCCEEECCCCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 46899999999999999999999999876 888888632 1122221111 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 68 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 141 (280)
T 3tox_A 68 DEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLT 141 (280)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 865 444444 379999999996532 13456678899888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... +...+..|..+|...+.+.+.+
T Consensus 142 ~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 173 (280)
T 3tox_A 142 FTSSFVGHTA-----------GFAGVAPYAASKAGLIGLVQAL 173 (280)
T ss_dssp EECCSBTTTB-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcChhhCcC-----------CCCCchhHHHHHHHHHHHHHHH
Confidence 9999865411 1123456777777777665543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.5e-14 Score=125.91 Aligned_cols=135 Identities=15% Similarity=0.151 Sum_probs=93.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|+++|.+ |+++.|+... .+...+.+.. ....++.++.+|+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~Dv 86 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCH---TVIASRSLPR---VLTAARKLAG-----------ATGRRCLPLSMDV 86 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHSSCEEEEECCT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHH-----------hcCCcEEEEEcCC
Confidence 367899999999999999999999999876 8888886321 1111111110 1125789999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 87 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 160 (277)
T 4fc7_A 87 RAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIV 160 (277)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9875 444443 379999999996432 13456678889888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|...+.+.+.
T Consensus 161 ~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 190 (277)
T 4fc7_A 161 NITATLGNRG------------QALQVHAGSAKAAVDAMTRH 190 (277)
T ss_dssp EECCSHHHHT------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EECchhhCCC------------CCCcHHHHHHHHHHHHHHHH
Confidence 9999865422 11234567777777666554
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=121.96 Aligned_cols=134 Identities=15% Similarity=0.215 Sum_probs=93.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 80 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNEK---ELDECLEIWR------------EKGLNVEGSVCDLL 80 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCceEEEECCCC
Confidence 46899999999999999999999999876 888888632 1111111111 11247889999999
Q ss_pred CCCCCCCHHHHHHHh--------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR--------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 81 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 154 (273)
T 1ae1_A 81 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 154 (273)
T ss_dssp CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 444443 579999999997532 13456677888877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+.... ..+..|..+|...+.+.+.+
T Consensus 155 ~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 185 (273)
T 1ae1_A 155 FLSSIAGFSAL------------PSVSLYSASKGAINQMTKSL 185 (273)
T ss_dssp EECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred EEcCHhhcCCC------------CCcchhHHHHHHHHHHHHHH
Confidence 99998665321 12456777788777776543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=122.82 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=94.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|++.|.+ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVT---VGALGRTRT---EVEEVADEIV------------GAGGQAIALEADVS 87 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHT------------TTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46889999999999999999999999876 888888632 1112211111 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 88 d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv 161 (283)
T 3v8b_A 88 DEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIV 161 (283)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEE
Confidence 865 444443 379999999997532 13456678899888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+.... +...+..|..+|...+.+.+.+
T Consensus 162 ~isS~~~~~~~----------~~~~~~~Y~asKaa~~~l~~~l 194 (283)
T 3v8b_A 162 VVSSINGTRTF----------TTPGATAYTATKAAQVAIVQQL 194 (283)
T ss_dssp EECCSBTTTBC----------CSTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcChhhccCC----------CCCCchHHHHHHHHHHHHHHHH
Confidence 99998654210 1123456777777777766543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=123.50 Aligned_cols=136 Identities=20% Similarity=0.161 Sum_probs=94.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. .....++.++.+|++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~l~-----------~~~~~~~~~~~~Dv~ 101 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGAN---VAVAARSPRE---LSSVTAELG-----------ELGAGNVIGVRLDVS 101 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGG---GHHHHHHHT-----------TSSSSCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH-----------hhCCCcEEEEEEeCC
Confidence 57899999999999999999999999876 8888887432 122222211 011147889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+ +.++|++|||||.... ...|...+++|+.| +||+
T Consensus 102 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~ 175 (293)
T 3rih_A 102 DPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVIL 175 (293)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 865 44433 3478999999997532 13556678889888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... +...+..|..+|+..+.+.+.+
T Consensus 176 isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 206 (293)
T 3rih_A 176 TSSITGPVT-----------GYPGWSHYGASKAAQLGFMRTA 206 (293)
T ss_dssp ECCSBTTTB-----------BCTTCHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccC-----------CCCCCHHHHHHHHHHHHHHHHH
Confidence 999865311 1113456777778777766543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=118.76 Aligned_cols=128 Identities=20% Similarity=0.197 Sum_probs=89.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+||||+|+||+++++.|+++|++ |+++.|+.. ++.+.... ..++.++.+|+++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~~ 61 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYR---VGLMARDEK------RLQALAAE-------------LEGALPLPGDVRE 61 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-------------hhhceEEEecCCC
Confidence 3678999999999999999999999876 888888632 22221110 1367889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
.. .+..++ .++|++|||||.... ...+...+++|+.| +||++
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~i 135 (234)
T 2ehd_A 62 EG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNV 135 (234)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 65 444433 478999999997532 13445667778766 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+... ...+..|..+|+..+.+.+.
T Consensus 136 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 163 (234)
T 2ehd_A 136 GSLAGKNP------------FKGGAAYNASKFGLLGLAGA 163 (234)
T ss_dssp CCTTTTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred CCchhcCC------------CCCCchhhHHHHHHHHHHHH
Confidence 99865421 12345677788877766554
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=124.68 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=95.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc------chhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK------TVSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|++|||||+|+||+++++.|+++|.+ |++++|..... ...+++.+.... + .....++.+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~ 111 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGAD---IVAIDLCRQQPNLDYAQGSPEELKETVRL-----V----EEQGRRIIA 111 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECCCCCTTCCSCCCCHHHHHHHHHH-----H----HHTTCCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCe---EEEEecccccccccccccCHHHHHHHHHH-----H----HhcCCeEEE
Confidence 56899999999999999999999999876 78777652211 012233222211 0 012357899
Q ss_pred EecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------
Q psy14522 201 VTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 201 v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g---------------- 250 (298)
+.+|++++. .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 112 ~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 185 (317)
T 3oec_A 112 RQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG 185 (317)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 999999865 444444 379999999997532 14556678899887
Q ss_pred ---eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ---SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ---~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 186 ~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 222 (317)
T 3oec_A 186 QGGSVIFVSSTVGLRG------------APGQSHYAASKHGVQGLMLSL 222 (317)
T ss_dssp SCEEEEEECCGGGSSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECcHHhcCC------------CCCCcchHHHHHHHHHHHHHH
Confidence 5999999866432 123456777788777766543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=123.53 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=97.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|++.|....+|++..|+.. ..+.+.+.+... ....++.++.+|+
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~---~~~~~~~~l~~~----------~~~~~~~~~~~Dv 96 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLE---KLEELKKTIDQE----------FPNAKVHVAQLDI 96 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHHHHHH----------CTTCEEEEEECCT
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHH---HHHHHHHHHHhh----------CCCCeEEEEECCC
Confidence 357899999999999999999999999863345888888632 122222222110 0125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc------------------eE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~ 252 (298)
++++ .+..+++ ++|++|||||.... ...+...+++|+.| +|
T Consensus 97 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~I 170 (287)
T 3rku_A 97 TQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDI 170 (287)
T ss_dssp TCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 9986 5665554 68999999996531 14566788999988 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... ......|..+|...+.+.+.+
T Consensus 171 V~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 202 (287)
T 3rku_A 171 VNLGSIAGRDA------------YPTGSIYCASKFAVGAFTDSL 202 (287)
T ss_dssp EEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEECChhhcCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 99999866422 112356777777777665543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-14 Score=123.42 Aligned_cols=134 Identities=14% Similarity=0.179 Sum_probs=90.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~ 64 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGAN---VVVNYAGNE--QKANEVVDEIK------------KLGSDAIAVRADVA 64 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 35789999999999999999999999876 888887321 11112211111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 138 (246)
T 2uvd_A 65 NAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVN 138 (246)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4554443 79999999997532 13456678888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... ..+..|..+|...+.+.+.
T Consensus 139 isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~ 167 (246)
T 2uvd_A 139 IASVVGVTGN------------PGQANYVAAKAGVIGLTKT 167 (246)
T ss_dssp ECCTHHHHCC------------TTBHHHHHHHHHHHHHHHH
T ss_pred ECCHHhcCCC------------CCCchHHHHHHHHHHHHHH
Confidence 9998653211 1234566777766665443
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.8e-14 Score=121.94 Aligned_cols=131 Identities=17% Similarity=0.171 Sum_probs=92.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++.+.... ...++.++.+|++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINEA------AGQQLAAE------------LGERSMFVRHDVS 62 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHHH------------HCTTEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------cCCceEEEEccCC
Confidence 46899999999999999999999999876 888888632 22221110 1257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~i 255 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||++
T Consensus 63 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~i 136 (253)
T 1hxh_A 63 SEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINM 136 (253)
T ss_dssp CHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 865 444443 3689999999975321 3455677888766 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||..+... ...+..|..+|+..+.+.+.+
T Consensus 137 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 165 (253)
T 1hxh_A 137 ASVSSWLP------------IEQYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp CCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCC------------CCCCccHHHHHHHHHHHHHHH
Confidence 99866432 123456788888888776654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=122.34 Aligned_cols=136 Identities=13% Similarity=0.155 Sum_probs=93.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|.+ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~--~~~~~~~~~l~------------~~~~~~~~~~~Dv~ 91 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAA---VALTYVNAA--ERAQAVVSEIE------------QAGGRAVAIRADNR 91 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 56899999999999999999999999876 777655432 11122222211 12357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++ .+..+++ ++|++|||||.... ...+...+++|+.| +||++|
T Consensus 92 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 92 DAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 875 4444443 79999999997532 13556778899888 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... +...+..|..+|...+.+.+.+
T Consensus 166 S~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 194 (271)
T 3v2g_A 166 SNLAELV-----------PWPGISLYSASKAALAGLTKGL 194 (271)
T ss_dssp CGGGTCC-----------CSTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhhccC-----------CCCCchHHHHHHHHHHHHHHHH
Confidence 9754321 1223456777778777765543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=122.11 Aligned_cols=138 Identities=15% Similarity=0.156 Sum_probs=94.5
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+.+|++|||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~D 76 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAK---VVVNYANST--KDAEKVVSEIK------------ALGSDAIAIKAD 76 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECC
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCH--HHHHHHHHHHH------------hcCCcEEEEEcC
Confidence 3467899999999999999999999999876 777665432 11222222221 123578999999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEE
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVH 254 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~ 254 (298)
++++. .+..++ .++|++|||||.... ...+...+++|+.| ++|+
T Consensus 77 v~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 77 IRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 99865 444443 378999999997542 13556678899988 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... +...+..|..+|...+.+.+.+
T Consensus 151 isS~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~l 181 (270)
T 3is3_A 151 TSSNTSKDF-----------SVPKHSLYSGSKGAVDSFVRIF 181 (270)
T ss_dssp ECCTTTTTC-----------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred EeCchhccC-----------CCCCCchhHHHHHHHHHHHHHH
Confidence 999753211 1223456777777777766543
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=122.43 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=94.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-------chhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-------TVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|++|||||+|+||+++++.|+++|++ |++++|..... ...+++.+.... + .....++.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~ 76 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGAD---IIAVDIAGKLPSCVPYDPASPDDLSETVRL-----V----EAANRRIV 76 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHHH-----H----HHTTCCEE
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeccccccccccccccCHHHHHHHHHH-----H----HhcCCeEE
Confidence 56899999999999999999999999876 88887742210 012222222111 0 01235789
Q ss_pred EEecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc---------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------- 250 (298)
++.+|+++.. .+..++ .++|++|||||..... ..++..+++|+.|
T Consensus 77 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 150 (277)
T 3tsc_A 77 AAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEG 150 (277)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 9999999865 444443 4699999999975421 3456678889887
Q ss_pred ----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 151 ~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 188 (277)
T 3tsc_A 151 GRGGSIILISSAAGMKM------------QPFMIHYTASKHAVTGLARAF 188 (277)
T ss_dssp TSCEEEEEECCGGGTSC------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEccHhhCCC------------CCCchhhHHHHHHHHHHHHHH
Confidence 7999999866432 112345777777777666543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.9e-14 Score=122.16 Aligned_cols=130 Identities=13% Similarity=0.121 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++.+ + . ...++.++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~---------~---~--~~~~~~~~~~D~~ 60 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINES------KLQE---------L---E--KYPGIQTRVLDVT 60 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHGG---------G---G--GSTTEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHH---------H---H--hccCceEEEeeCC
Confidence 46899999999999999999999999876 888888632 1110 0 0 0136888999999
Q ss_pred CCCCCCCHHHHHHH---hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVL---RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l---~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
++. .+..+ ..++|++|||||..... ..+...+++|+.| +||++||.
T Consensus 61 ~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~ 134 (246)
T 2ag5_A 61 KKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV 134 (246)
T ss_dssp CHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred CHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEech
Confidence 865 44444 45799999999975421 3455677888877 89999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.... | ..+..|..+|+..+.+.+.+
T Consensus 135 ~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~l 161 (246)
T 2ag5_A 135 ASSVKG----------V-VNRCVYSTTKAAVIGLTKSV 161 (246)
T ss_dssp BTTTBC----------C-TTBHHHHHHHHHHHHHHHHH
T ss_pred HhCcCC----------C-CCCccHHHHHHHHHHHHHHH
Confidence 654221 1 13456888888888777654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=120.57 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=91.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |++++|... ++.+... ....++.++.+|++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 68 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGAT---VAIADLDVM------AAQAVVA------------GLENGGFAVEVDVT 68 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TCTTCCEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HHhcCCeEEEEeCC
Confidence 46799999999999999999999999876 888888632 2221111 11136788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|++|||||..... ..+...+++|+.| +||
T Consensus 69 d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv 142 (263)
T 3ak4_A 69 KRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIV 142 (263)
T ss_dssp CHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 865 5555544 799999999975321 2455667777766 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...+..|..+|+..+.+.+.+
T Consensus 143 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 173 (263)
T 3ak4_A 143 NTASLAAKVG------------APLLAHYSASKFAVFGWTQAL 173 (263)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EecccccccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 9999865422 112456777888777776543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-14 Score=124.86 Aligned_cols=134 Identities=14% Similarity=0.178 Sum_probs=86.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 73 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV---IHTCARNEYE---LNECLSKWQ------------KKGFQVTGSVCDAS 73 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeeEEEECCCC
Confidence 46789999999999999999999999876 8888886321 111111111 01247889999999
Q ss_pred CCCCCCCHHHHHHHh--------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR--------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|+||||||.... ...+...+++|+.| +||
T Consensus 74 ~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv 147 (266)
T 1xq1_A 74 LRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNII 147 (266)
T ss_dssp SHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 444444 579999999997532 13445567778776 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+... ...+..|..+|+..+.+.+.+
T Consensus 148 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 178 (266)
T 1xq1_A 148 FMSSIAGVVS------------ASVGSIYSATKGALNQLARNL 178 (266)
T ss_dssp EEC----------------------CCHHHHHHHHHHHHHHHH
T ss_pred EEccchhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 9999865421 112345777788877776643
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-14 Score=125.37 Aligned_cols=130 Identities=19% Similarity=0.216 Sum_probs=85.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||++++++|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 68 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAA---VVVADINAE---AAEAVAKQIV------------ADGGTAISVAVDVS 68 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46899999999999999999999999876 888888632 1222222211 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccC----------ccccHHHHhhccccc------------------e
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVR----------FDENIKVAIAINIFG------------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~----------~~~~~~~~~~~Nv~g------------------~ 251 (298)
++. .+..+++ ++|++|||||... ....+...+++|+.| +
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 142 (253)
T 3qiv_A 69 DPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGA 142 (253)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCE
Confidence 875 4544443 7999999999731 113456678889888 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||++||..+.. ....|..+|...+.+.+.
T Consensus 143 iv~isS~~~~~---------------~~~~Y~asK~a~~~~~~~ 171 (253)
T 3qiv_A 143 IVNQSSTAAWL---------------YSNYYGLAKVGINGLTQQ 171 (253)
T ss_dssp EEEECC--------------------------CCHHHHHHHHHH
T ss_pred EEEECCccccC---------------CCchhHHHHHHHHHHHHH
Confidence 99999986541 122366666766666543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.3e-14 Score=122.82 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=93.5
Q ss_pred hhhcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 125 EFYRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 125 ~~~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
...++|+||||||+ |+||+++++.|+++|++ |+++.|... ..+.+.+.... ..++.++.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~ 70 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAE---LAFTYVGDR---FKDRITEFAAE-------------FGSELVFP 70 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHHH-------------TTCCCEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC---EEEEecchh---hHHHHHHHHHH-------------cCCcEEEE
Confidence 34678999999999 99999999999999876 888888732 22233322211 13578899
Q ss_pred cCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc------------cccHHHHhhccccc-------------
Q psy14522 203 GDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF------------DENIKVAIAINIFG------------- 250 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g------------- 250 (298)
+|++++. .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 71 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 144 (271)
T 3ek2_A 71 CDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS 144 (271)
T ss_dssp CCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 9999865 4554443 68999999997532 13445678888887
Q ss_pred ---eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ---SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ---~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||..+... ...+..|..+|...+.+.+.
T Consensus 145 ~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 180 (271)
T 3ek2_A 145 DDASLLTLSYLGAERA------------IPNYNTMGLAKAALEASVRY 180 (271)
T ss_dssp EEEEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHH
T ss_pred cCceEEEEeccccccC------------CCCccchhHHHHHHHHHHHH
Confidence 8999999865422 11244566777776666554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.49 E-value=7.8e-14 Score=121.92 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=93.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. ....++.++.+|+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~-----------~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGAT---VILLGRNEE---KLRQVASHINE-----------ETGRQPQWFILDL 71 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH-----------HHSCCCEEEECCT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHh-----------hcCCCceEEEEec
Confidence 467899999999999999999999999876 888888632 11222222111 0113778899999
Q ss_pred --CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------
Q psy14522 206 --SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 206 --~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------ 250 (298)
++.. .+..++ .++|++|||||.... ...|...+++|+.|
T Consensus 72 ~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g 145 (252)
T 3f1l_A 72 LTCTSE------NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG 145 (252)
T ss_dssp TTCCHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC
T ss_pred ccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC
Confidence 6543 344433 379999999997421 13456678899888
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 146 ~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 179 (252)
T 3f1l_A 146 SLVFTSSSVGRQG------------RANWGAYAASKFATEGMMQVL 179 (252)
T ss_dssp EEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECChhhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8999999865422 122456777788777766543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.2e-14 Score=122.98 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=89.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|++|||||+|+||+++++.|+++|++ |+++.|+..... ....++.+|+++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~~-------------------------~~~~~~~~D~~~ 53 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYT---VLNIDLSANDQA-------------------------DSNILVDGNKNW 53 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCCTTS-------------------------SEEEECCTTSCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecCccccc-------------------------cccEEEeCCCCC
Confidence 5789999999999999999999999866 888888754210 235677899987
Q ss_pred CCCCCCHHHHHHHh---------cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEE
Q psy14522 208 PGLGLSAADRAVLR---------RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVH 254 (298)
Q Consensus 208 ~~~gl~~~~~~~l~---------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~ 254 (298)
++ .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 54 ~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 127 (236)
T 1ooe_A 54 TE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQL 127 (236)
T ss_dssp HH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEE
Confidence 64 444333 479999999996431 13445677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+... ......|..+|...+.+.+.+
T Consensus 128 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 157 (236)
T 1ooe_A 128 TGAAAAMGP------------TPSMIGYGMAKAAVHHLTSSL 157 (236)
T ss_dssp ECCGGGGSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ECchhhccC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 999865421 223456788888888777654
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.49 E-value=7.5e-14 Score=124.18 Aligned_cols=133 Identities=18% Similarity=0.242 Sum_probs=91.4
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+ |+||+++++.|+++|++ |+++.|+.. ..+.+.+.... ..++.++.+|
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D 79 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQ---LAFTYATPK---LEKRVREIAKG-------------FGSDLVVKCD 79 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHHH-------------TTCCCEEECC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCCHH---HHHHHHHHHHh-------------cCCeEEEEcC
Confidence 467999999999 99999999999999876 888888642 12222222110 0246788999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
++++. .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 80 l~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 153 (285)
T 2p91_A 80 VSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN 153 (285)
T ss_dssp TTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 99865 444443 378999999997532 13455677888877
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 154 g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 188 (285)
T 2p91_A 154 GAIVTLSYYGAEKV------------VPHYNVMGIAKAALESTVRYL 188 (285)
T ss_dssp CEEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEccchhccC------------CCCccHHHHHHHHHHHHHHHH
Confidence 8999999765421 112345777777777766543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.1e-14 Score=120.83 Aligned_cols=133 Identities=15% Similarity=0.114 Sum_probs=92.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++.+.... + ....++.++.+|++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~D~~ 64 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD------VGEKAAKS-----V-----GTPDQIQFFQHDSS 64 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-----CCTTTEEEEECCTT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h-----hccCceEEEECCCC
Confidence 46789999999999999999999999876 888888632 11111110 1 00147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|+||||||.... ...+...+++|+.| +||
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv 138 (251)
T 1zk4_A 65 DED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII 138 (251)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 865 4444443 59999999997532 13445567777764 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||..+.... ..+..|..+|+..+.+.+.+
T Consensus 139 ~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~~ 169 (251)
T 1zk4_A 139 NMSSIEGFVGD------------PSLGAYNASKGAVRIMSKSA 169 (251)
T ss_dssp EECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred EeCCchhccCC------------CCCccchHHHHHHHHHHHHH
Confidence 99998654321 13456788888888776643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.2e-14 Score=124.12 Aligned_cols=136 Identities=13% Similarity=0.157 Sum_probs=94.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+...+.+.. . .....+.++.+|++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~--------~--~~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGAN---VLINGRREEN---VNETIKEIRA--------Q--YPDAILQPVVADLG 71 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH--------H--CTTCEEEEEECCTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh--------h--CCCceEEEEecCCC
Confidence 46899999999999999999999999876 8888886321 1111111111 0 01246788999999
Q ss_pred CCCCCCCHHHHHHHh---cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLR---RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~---~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
++. .+..+. .++|++|||||.... ...+...+++|+.| +||++||.
T Consensus 72 ~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~ 145 (267)
T 3t4x_A 72 TEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASE 145 (267)
T ss_dssp SHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCG
T ss_pred CHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcch
Confidence 865 455444 479999999997532 13456678889888 89999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+... ...+..|..+|...+.+.+.+
T Consensus 146 ~~~~~------------~~~~~~Y~asKaa~~~l~~~l 171 (267)
T 3t4x_A 146 AAIMP------------SQEMAHYSATKTMQLSLSRSL 171 (267)
T ss_dssp GGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hhccC------------CCcchHHHHHHHHHHHHHHHH
Confidence 66422 223456777788777776543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-14 Score=123.14 Aligned_cols=130 Identities=14% Similarity=0.090 Sum_probs=88.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+....+ ...+ +...++.++.+|++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~---~~~~---------------~~~~~~~~~~~Dv~ 63 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGAT---VLGLDLKPPAGE---EPAA---------------ELGAAVRFRNADVT 63 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSCC------------------------------CEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHHH---HHHH---------------HhCCceEEEEccCC
Confidence 46899999999999999999999999876 888888754211 1111 11247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-----------cccHHHHhhccccc------------------
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-----------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g------------------ 250 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 64 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~ 137 (257)
T 3tpc_A 64 NEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPD 137 (257)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Confidence 865 4444443 89999999997532 13456677888877
Q ss_pred ------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+.... .....|..+|...+.+.+.
T Consensus 138 ~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~ 176 (257)
T 3tpc_A 138 ADGERGVIVNTASIAAFDGQ------------IGQAAYAASKGGVAALTLP 176 (257)
T ss_dssp TTSCCEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEechhhccCC------------CCCcchHHHHHHHHHHHHH
Confidence 49999998654221 1234677777776666543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.4e-14 Score=123.96 Aligned_cols=137 Identities=20% Similarity=0.195 Sum_probs=92.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+...+.+. .. .....++.++.+|++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~--------~~-~~~~~~~~~~~~Dv~ 73 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGAS---VMIVGRNPDK---LAGAVQELE--------AL-GANGGAIRYEPTDIT 73 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH--------TT-CCSSCEEEEEECCTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH--------Hh-CCCCceEEEEeCCCC
Confidence 46899999999999999999999999876 8888886321 111111111 00 011137889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||
T Consensus 74 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 147 (281)
T 3svt_A 74 NED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFV 147 (281)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 444443 378999999997321 13456678889888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+.... ..+..|..+|...+.+.+.+
T Consensus 148 ~isS~~~~~~~------------~~~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 148 GISSIAASNTH------------RWFGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp EECCHHHHSCC------------TTCTHHHHHHHHHHHHHHHH
T ss_pred EEeCHHHcCCC------------CCChhHHHHHHHHHHHHHHH
Confidence 99998654221 12345677777777766543
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-13 Score=124.25 Aligned_cols=135 Identities=20% Similarity=0.291 Sum_probs=91.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+..++|+|||||||||+++++.|++.|++ |++++|+.+... ....+... . ..+++++.+|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~l-~--------------~~~v~~~~~Dl 69 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRP---TYILARPGPRSPSKAKIFKAL-E--------------DKGAIIVYGLI 69 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCC---EEEEECSSCCCHHHHHHHHHH-H--------------HTTCEEEECCT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCC---EEEEECCCCCChhHHHHHHHH-H--------------hCCcEEEEeec
Confidence 44679999999999999999999999876 999999863221 11112111 1 15889999999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCcccCccccHH---HHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCChH
Q psy14522 206 SLPGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIK---VAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDYK 279 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~---~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y 279 (298)
.+.. .+..+++ ++|+|||+|+..+...... ...+.+ +. +||+ |.|+. ..+|.. +..+.
T Consensus 70 ~d~~------~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~-~~v~--S~~g~----~~~e~~---~~~p~ 133 (346)
T 3i6i_A 70 NEQE------AMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIK-RFLP--SEFGH----DVNRAD---PVEPG 133 (346)
T ss_dssp TCHH------HHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCS-EEEC--SCCSS----CTTTCC---CCTTH
T ss_pred CCHH------HHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCce-EEee--cccCC----CCCccC---cCCCc
Confidence 9865 7888888 9999999999865443221 112222 32 5664 44442 233433 33456
Q ss_pred HHHHHHHHHHHHHHhh
Q psy14522 280 DFMELVMSRSDDNLEE 295 (298)
Q Consensus 280 ~~yk~sK~~aE~~l~~ 295 (298)
..|..+|+.+|++++.
T Consensus 134 ~~y~~sK~~~e~~l~~ 149 (346)
T 3i6i_A 134 LNMYREKRRVRQLVEE 149 (346)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 6788899999999875
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=4.4e-14 Score=125.43 Aligned_cols=149 Identities=16% Similarity=0.084 Sum_probs=98.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc------hhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT------VSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~------~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|++|||||+|+||+++++.|+++|++ |++++|...... ..+++++.... + .....++.+
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~ 75 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGAD---IILFDICHDIETNEYPLATSRDLEEAGLE-----V----EKTGRKAYT 75 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTSCSCCCCHHHHHHHHHH-----H----HHTTSCEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcccccccccccchhhhHHHHHHHHH-----H----HhcCCceEE
Confidence 56899999999999999999999999876 888887632111 12222221110 0 012357899
Q ss_pred EecCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-----cccHHHHhhccccc----------------eE
Q psy14522 201 VTGDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-----DENIKVAIAINIFG----------------SF 252 (298)
Q Consensus 201 v~~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-----~~~~~~~~~~Nv~g----------------~~ 252 (298)
+.+|++++. .+..+++ ++|++|||||.... ...+...+++|+.| ++
T Consensus 76 ~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 149 (287)
T 3pxx_A 76 AEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASI 149 (287)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEE
T ss_pred EEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEE
Confidence 999999865 4444443 79999999997542 24566778899888 89
Q ss_pred EEEeCCcccCC--CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCP--RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~--~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... ..+..+. .+...+..|..+|...+.+.+.+
T Consensus 150 v~isS~~~~~~~~~~~~~~~---~~~~~~~~Y~asK~a~~~~~~~l 192 (287)
T 3pxx_A 150 ITTGSVAGLIAAAQPPGAGG---PQGPGGAGYSYAKQLVDSYTLQL 192 (287)
T ss_dssp EEECCHHHHHHHHCCC--------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccchhcccccccccccc---cCCCccchHHHHHHHHHHHHHHH
Confidence 99999754321 1111121 12235677888898888776644
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.9e-14 Score=123.29 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=88.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv~ 89 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFD---IAITGIGDA--EGVAPVIAELS------------GLGARVIFLRADLA 89 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCe---EEEEeCCCH--HHHHHHHHHHH------------hcCCcEEEEEecCC
Confidence 56899999999999999999999999876 888776432 11122222111 11257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccC---------ccccHHHHhhccccc--------------------
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVR---------FDENIKVAIAINIFG-------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~---------~~~~~~~~~~~Nv~g-------------------- 250 (298)
++. .+..++ .++|++|||||... ....+...+++|+.|
T Consensus 90 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~ 163 (280)
T 4da9_A 90 DLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARAS 163 (280)
T ss_dssp SGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCC
Confidence 976 444443 37999999999732 124456677888877
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|...+.+.+.
T Consensus 164 g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 197 (280)
T 4da9_A 164 RSIINITSVSAVMT------------SPERLDYCMSKAGLAAFSQG 197 (280)
T ss_dssp EEEEEECCC-------------------CCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcchhhccC------------CCCccHHHHHHHHHHHHHHH
Confidence 5999999865421 11234577777777766554
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.7e-14 Score=121.64 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=91.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|+..... .+.+.+.+. ....++.++.+|++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~-~~~~~~~~~------------~~~~~~~~~~~Dv~~~ 65 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFD---IAVADLPQQEEQ-AAETIKLIE------------AADQKAVFVGLDVTDK 65 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECGGGHHH-HHHHHHHHH------------TTTCCEEEEECCTTCH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchHH-HHHHHHHHH------------hcCCcEEEEEccCCCH
Confidence 689999999999999999999999876 888888643100 111111111 1125788999999986
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEE
Q psy14522 209 GLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~i 255 (298)
. .+..+++ ++|++|||||..... ..+...+++|+.| +||++
T Consensus 66 ~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 139 (258)
T 3a28_C 66 A------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA 139 (258)
T ss_dssp H------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5 4444443 799999999975321 3455667777766 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||..+... ...+..|..+|+..+.+.+.+
T Consensus 140 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 168 (258)
T 3a28_C 140 ASIAAIQG------------FPILSAYSTTKFAVRGLTQAA 168 (258)
T ss_dssp CCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred CcchhccC------------CCCchhHHHHHHHHHHHHHHH
Confidence 99865432 112456777888877776543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=121.45 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=92.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. . ....++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~--------~--~~~~~~~~~~~D~~ 68 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGAR---LLLFSRNREK---LEAAASRIAS--------L--VSGAQVDIVAGDIR 68 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH--------H--STTCCEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh--------c--CCCCeEEEEEccCC
Confidence 45789999999999999999999999876 8888886321 1111111110 0 00127889999999
Q ss_pred CCCCCCCHHHHHHHhc------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLRR------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 69 ~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 142 (260)
T 2z1n_A 69 EPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYI 142 (260)
T ss_dssp CHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 875 5555554 49999999996432 13456677888877 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||..+... ...+..|..+|...+.+.+.
T Consensus 143 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~ 170 (260)
T 2z1n_A 143 GSVTLLRP------------WQDLALSNIMRLPVIGVVRT 170 (260)
T ss_dssp CCGGGTSC------------CTTBHHHHHHTHHHHHHHHH
T ss_pred CchhhcCC------------CCCCchhHHHHHHHHHHHHH
Confidence 99866432 11245677777777766554
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=121.76 Aligned_cols=134 Identities=14% Similarity=0.076 Sum_probs=90.5
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dv 82 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA---VYGCARDAK---NVSAAVDGLR------------AAGHDVDGSSCDV 82 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------TTTCCEEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEECCC
Confidence 356899999999999999999999999876 888888632 1112211111 1235789999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc--------------------e
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG--------------------S 251 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------------~ 251 (298)
+++. .+..++ .++|++|||||.... ...+...+++|+.| +
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~ 156 (279)
T 3sju_A 83 TSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR 156 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcE
Confidence 9865 444443 378999999997532 13455667788877 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||++||+.+... ......|..+|...+.+.+.
T Consensus 157 iV~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 188 (279)
T 3sju_A 157 IVNIASTGGKQG------------VMYAAPYTASKHGVVGFTKS 188 (279)
T ss_dssp EEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EEEECChhhccC------------CCCChhHHHHHHHHHHHHHH
Confidence 999999866422 12234677777776666554
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=121.91 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=93.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||++++++|+++|++ |+++.|... ...+.+.+.+. ....++.++.+|++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~---v~~~~r~~~--~~~~~~~~~l~------------~~~~~~~~~~~D~~ 81 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSS--KAAEEVVAELK------------KLGAQGVAIQADIS 81 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCch--HHHHHHHHHHH------------hcCCcEEEEEecCC
Confidence 56899999999999999999999999876 888888321 11112211111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
++. .+..+++ ++|+||||||..... ..+...+++|+.| +||++|
T Consensus 82 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 82 KPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp SHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 865 5555544 799999999975321 2345567788766 789999
Q ss_pred CCccc-CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTH-CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~-~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+. .. ......|..+|+..|.+.+.+
T Consensus 156 S~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ 184 (274)
T 1ja9_A 156 SIAAVMTG------------IPNHALYAGSKAAVEGFCRAF 184 (274)
T ss_dssp CGGGTCCS------------CCSCHHHHHHHHHHHHHHHHH
T ss_pred ChHhccCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 98654 21 112356888889888887654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8.8e-14 Score=123.10 Aligned_cols=133 Identities=12% Similarity=0.120 Sum_probs=92.7
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+ |+||+++++.|+++|++ |+++.|+... .+.+.+.... ..++.++.+|
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~l~~~-------------~~~~~~~~~D 64 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNESL---EKRVRPIAQE-------------LNSPYVYELD 64 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTTT---HHHHHHHHHH-------------TTCCCEEECC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-------------cCCcEEEEcC
Confidence 467899999999 99999999999999876 8888887531 2222222110 0246789999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
++++. .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 65 ~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (275)
T 2pd4_A 65 VSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGA 138 (275)
T ss_dssp TTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 99865 444443 378999999997532 13455677888877
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 139 ~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 172 (275)
T 2pd4_A 139 SVLTLSYLGSTKY------------MAHYNVMGLAKAALESAVRYL 172 (275)
T ss_dssp EEEEEECGGGTSB------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecchhcCC------------CCCchhhHHHHHHHHHHHHHH
Confidence 8999999765421 123456778888777776543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=122.65 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=94.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... ..+.+.+.+. ....++.++.+|++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~ 89 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANSTE--SAEEVVAAIK------------KNGSDAACVKANVG 89 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHHHH------------HhCCCeEEEEcCCC
Confidence 46899999999999999999999999876 8888886421 1112211111 11257889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+.. .+..+ +.++|++|||||.... ...+...+++|+.| +||++|
T Consensus 90 ~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 90 VVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 865 34333 3479999999997542 13456678888877 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.+.... . ..+..|..+|+..+.+.+.+
T Consensus 164 S~~~~~~~---------~--~~~~~Y~asK~a~~~~~~~l 192 (283)
T 1g0o_A 164 SITGQAKA---------V--PKHAVYSGSKGAIETFARCM 192 (283)
T ss_dssp CGGGTCSS---------C--SSCHHHHHHHHHHHHHHHHH
T ss_pred chhhccCC---------C--CCCcchHHHHHHHHHHHHHH
Confidence 98654221 1 12456778888887776643
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.8e-14 Score=124.81 Aligned_cols=136 Identities=17% Similarity=0.173 Sum_probs=94.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |++..|.... ...+.+.+... ....++.++.+|++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~Dv~ 110 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAINYLPAEE-EDAQQVKALIE------------ECGRKAVLLPGDLS 110 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCGGGH-HHHHHHHHHHH------------HTTCCEEECCCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcch-hHHHHHHHHHH------------HcCCcEEEEEecCC
Confidence 56899999999999999999999999876 7877775321 11222222221 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~i 255 (298)
+.. .+..++ .++|++|||||.... ...+...+++|+.| +||++
T Consensus 111 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 111 DES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp SHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 865 444433 479999999997431 13456678899988 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... ...+..|..+|...+.+.+.+
T Consensus 185 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 213 (294)
T 3r3s_A 185 SSIQAYQP------------SPHLLDYAATKAAILNYSRGL 213 (294)
T ss_dssp CCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred CChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 99866532 122456777777777765543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=119.47 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=92.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||++++++|+++|++ |+++.|+... .+.+.+.+.. ....++.++.+|++++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~D~~~~ 64 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA---LALGARSVDR---LEKIAHELMQ-----------EQGVEVFYHHLDVSKA 64 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHCCCEEEEECCTTCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-----------hcCCeEEEEEeccCCH
Confidence 689999999999999999999999876 8888886321 1121111110 1125789999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEEeC
Q psy14522 209 GLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHVST 257 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~iSS 257 (298)
. .+..+++ ++|++|||||.... ...+...+++|+.| ++|++||
T Consensus 65 ~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS 138 (235)
T 3l77_A 65 E------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTS 138 (235)
T ss_dssp H------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEec
Confidence 5 5555554 78999999997532 13456678889888 6888888
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
..+... ......|..+|+..+.+.+.
T Consensus 139 ~~~~~~------------~~~~~~Y~~sKaa~~~~~~~ 164 (235)
T 3l77_A 139 DVSARL------------IPYGGGYVSTKWAARALVRT 164 (235)
T ss_dssp GGGSSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred chhccc------------CCCcchHHHHHHHHHHHHHH
Confidence 754321 11235688888888877654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=122.83 Aligned_cols=92 Identities=16% Similarity=0.107 Sum_probs=60.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+||||||+|+||+++++.|+++|++ |++++|+... .+...+.+. .....++.++.+|++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~---V~~~~r~~~~---~~~~~~~l~-----------~~~~~~~~~~~~Dl~ 72 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIM---VVLTCRDVTK---GHEAVEKLK-----------NSNHENVVFHQLDVT 72 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH-----------TTTCCSEEEEECCTT
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH-----------hcCCCceEEEEccCC
Confidence 56899999999999999999999999876 8999987421 111111111 112257899999999
Q ss_pred CC-CC-CCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 207 LP-GL-GLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 207 ~~-~~-gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
++ .. ....+.+.....++|++|||||...
T Consensus 73 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 73 DPIATMSSLADFIKTHFGKLDILVNNAGVAG 103 (311)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCEEEECCCCCS
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEECCcccc
Confidence 87 40 0000122222348999999999763
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=6.9e-14 Score=122.57 Aligned_cols=131 Identities=16% Similarity=0.170 Sum_probs=91.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... +.+.+. ...++.++.+|++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~---~~~~~~---------------~~~~~~~~~~D~~ 68 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGAS---AVLLDLPNSGG---EAQAKK---------------LGNNCVFAPADVT 68 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSSH---HHHHHH---------------HCTTEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCcHhH---HHHHHH---------------hCCceEEEEcCCC
Confidence 46799999999999999999999999876 88888875421 111111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------------cccHHHHhhccccc----------------
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------------~~~~~~~~~~Nv~g---------------- 250 (298)
++. .+..+++ ++|+||||||.... ...+...+++|+.|
T Consensus 69 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 142 (265)
T 2o23_A 69 SEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 142 (265)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Confidence 865 5555544 79999999997532 12345566777765
Q ss_pred --------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||.++.... ..+..|..+|...+.+.+.+
T Consensus 143 ~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 184 (265)
T 2o23_A 143 PDQGGQRGVIINTASVAAFEGQ------------VGQAAYSASKGGIVGMTLPI 184 (265)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEEeCChhhcCCC------------CCCchhHHHHHHHHHHHHHH
Confidence 59999998654221 12456777788777666543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-13 Score=120.14 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=83.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.++ ....++.++.+|++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~---Vv~~~~~~~---~~~~~~~~i~------------~~g~~~~~~~~Dvt 66 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSI---VVAVELLED---RLNQIVQELR------------GMGKEVLGVKADVS 66 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 57999999999999999999999999866 888888632 2222222221 12357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc----c----ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF----D----ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~----~----~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ +++.+ +.++|++|||||.... . +.|+..+++|+.| ++|
T Consensus 67 ~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV 140 (254)
T 4fn4_A 67 KKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIV 140 (254)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 875 44444 3479999999996421 1 4567789999998 999
Q ss_pred EEeCCcccC
Q psy14522 254 HVSTAYTHC 262 (298)
Q Consensus 254 ~iSS~~~~~ 262 (298)
++||+.+..
T Consensus 141 nisS~~g~~ 149 (254)
T 4fn4_A 141 NTASIAGIR 149 (254)
T ss_dssp EECCGGGTC
T ss_pred EEechhhcC
Confidence 999987653
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=122.16 Aligned_cols=135 Identities=18% Similarity=0.156 Sum_probs=92.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|.+ |++..+... ...+.+.+.+. ....++.++.+|++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~ 87 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT---VVINYAGKA--AAAEEVAGKIE------------AAGGKALTAQADVS 87 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE---EEEEESSCS--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEcCCCH--HHHHHHHHHHH------------hcCCeEEEEEcCCC
Confidence 46899999999999999999999999876 666544322 12222222221 12257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++ .+..++ .++|++|||||..... ..++..+++|+.| ++|++|
T Consensus 88 ~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 88 DPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp CHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 865 444443 3799999999975321 3456677899888 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ...+..|..+|+..+.+.+.+
T Consensus 162 S~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 189 (267)
T 3u5t_A 162 TSQVGLL------------HPSYGIYAAAKAGVEAMTHVL 189 (267)
T ss_dssp CTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 9855321 112456788888777776543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8.8e-14 Score=121.29 Aligned_cols=130 Identities=15% Similarity=0.189 Sum_probs=91.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 62 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGAT---VIVSDINAE------GAKAAAA------------SIGKKARAIAADIS 62 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHH------------HHCTTEEECCCCTT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhCCceEEEEcCCC
Confidence 56899999999999999999999999876 888888632 2222211 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..+++ ++|++|||||..... ..+...+++|+.| +||
T Consensus 63 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv 136 (247)
T 3rwb_A 63 DPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVI 136 (247)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 875 4444443 799999999975321 3456678888877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||..+... ...+..|..+|...+.+.+.
T Consensus 137 ~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 166 (247)
T 3rwb_A 137 SIASNTFFAG------------TPNMAAYVAAKGGVIGFTRA 166 (247)
T ss_dssp EECCTHHHHT------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EECchhhccC------------CCCchhhHHHHHHHHHHHHH
Confidence 9999855421 11234566677666655543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=120.37 Aligned_cols=106 Identities=19% Similarity=0.275 Sum_probs=83.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|++|||||+++||+++++.|++.|.+ |++..|+....+ .....++..+.+|+
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~---Vv~~~~~~~~~~---------------------~~~~~~~~~~~~Dv 63 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAE---VVALGLDADGVH---------------------APRHPRIRREELDI 63 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTSTT---------------------SCCCTTEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHh---------------------hhhcCCeEEEEecC
Confidence 357999999999999999999999999876 888888754321 11235788999999
Q ss_pred CCCCCCCCHHHHHHH---hcCccEEEEcCcccCcc-----ccHHHHhhccccc-----------------eEEEEeCCcc
Q psy14522 206 SLPGLGLSAADRAVL---RRNVTVVFHGAATVRFD-----ENIKVAIAINIFG-----------------SFVHVSTAYT 260 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l---~~~vd~Vih~A~~~~~~-----~~~~~~~~~Nv~g-----------------~~v~iSS~~~ 260 (298)
++++ .++++ +.++|++|||||..... ..|+..+++|+.| ++|++||+.+
T Consensus 64 ~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 137 (242)
T 4b79_A 64 TDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS 137 (242)
T ss_dssp TCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence 9875 44444 45799999999975422 4567788999988 9999999876
Q ss_pred c
Q psy14522 261 H 261 (298)
Q Consensus 261 ~ 261 (298)
.
T Consensus 138 ~ 138 (242)
T 4b79_A 138 T 138 (242)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=121.94 Aligned_cols=135 Identities=16% Similarity=0.145 Sum_probs=90.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC-CCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR-PKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R-~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.| ... ..+.+.+.+.. ....++.++.+|+
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~~-----------~~~~~~~~~~~Dl 71 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFR---VVVHYRHSEG---AAQRLVAELNA-----------ARAGSAVLCKGDL 71 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHHH-----------HSTTCEEEEECCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCChH---HHHHHHHHHHH-----------hcCCceEEEeccC
Confidence 46789999999999999999999999876 888888 421 11222221110 0025788999999
Q ss_pred CCC----CCCCCHHHHHHHh-------cCccEEEEcCcccCcc------------------ccHHHHhhccccc------
Q psy14522 206 SLP----GLGLSAADRAVLR-------RNVTVVFHGAATVRFD------------------ENIKVAIAINIFG------ 250 (298)
Q Consensus 206 ~~~----~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~------------------~~~~~~~~~Nv~g------ 250 (298)
+++ . .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 72 ~~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 145 (276)
T 1mxh_A 72 SLSSSLLD------CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIR 145 (276)
T ss_dssp SSSTTHHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCccccHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHH
Confidence 987 4 444443 3799999999965321 3445566777655
Q ss_pred -----------------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -----------------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -----------------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~l 196 (276)
T 1mxh_A 146 AFARRQGEGGAWRSRNLSVVNLCDAMTDLP------------LPGFCVYTMAKHALGGLTRAA 196 (276)
T ss_dssp HHHHTC-------CCCEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCcEEEEECchhhcCC------------CCCCeehHHHHHHHHHHHHHH
Confidence 5899999865432 123456777888777776543
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.48 E-value=8e-14 Score=126.26 Aligned_cols=134 Identities=16% Similarity=0.176 Sum_probs=91.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+||||||+|+||++++++|+++|++ |++++|+... .+.+.+.+... ....++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~---Vv~~~r~~~~---~~~~~~~l~~~----------~~~~~~~~~~~Dl~ 69 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCK---VAIADIRQDS---IDKALATLEAE----------GSGPEVMGVQLDVA 69 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHHH----------TCGGGEEEEECCTT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHhc----------CCCCeEEEEECCCC
Confidence 45789999999999999999999999876 8888887421 12222222110 01137889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc--------------e-------
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG--------------S------- 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------~------- 251 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~ 143 (319)
T 3ioy_A 70 SRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQK 143 (319)
T ss_dssp CHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCC
Confidence 865 454444 368999999997532 13456678889888 3
Q ss_pred ---EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 252 ---FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 252 ---~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
||++||+.+.... ..+..|..+|...+.+.+
T Consensus 144 ~g~iV~isS~a~~~~~------------~~~~~Y~aSKaal~~~~~ 177 (319)
T 3ioy_A 144 GGHVVNTASMAAFLAA------------GSPGIYNTTKFAVRGLSE 177 (319)
T ss_dssp CCEEEEECCGGGTCCC------------SSSHHHHHHHHHHHHHHH
T ss_pred CcEEEEecccccccCC------------CCCHHHHHHHHHHHHHHH
Confidence 9999998665321 123467777774444433
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=124.00 Aligned_cols=132 Identities=10% Similarity=0.123 Sum_probs=91.9
Q ss_pred hcCceeeecCCCCC--CchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF--MGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~--iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+|+ ||+++++.|+++|.+ |+++.|... ..+.+.+.... ..++.++.+|
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D 89 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAE---LAFTYQGDA---LKKRVEPLAEE-------------LGAFVAGHCD 89 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCE---EEEEECSHH---HHHHHHHHHHH-------------HTCEEEEECC
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHHh-------------cCCceEEECC
Confidence 57899999999987 999999999999876 888888632 12222222111 1468899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
+++.+ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 90 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g 163 (293)
T 3grk_A 90 VADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGG 163 (293)
T ss_dssp TTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99875 444444 379999999997531 13456678888887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||..+... ...+..|..+|...+.+.+.
T Consensus 164 ~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 196 (293)
T 3grk_A 164 SILTLTYYGAEKV------------MPNYNVMGVAKAALEASVKY 196 (293)
T ss_dssp EEEEEECGGGTSB------------CTTTTHHHHHHHHHHHHHHH
T ss_pred EEEEEeehhhccC------------CCchHHHHHHHHHHHHHHHH
Confidence 8999999865432 11234566677766666544
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.6e-14 Score=121.21 Aligned_cols=137 Identities=13% Similarity=0.125 Sum_probs=92.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhC--CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRAC--PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g--~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+|+|+||||+|+||+++++.|+++| ++ |+++.|+.... +.+.+ . ...++.++.+|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~---V~~~~r~~~~~---~~l~~------------~---~~~~~~~~~~D~ 60 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRH---IIATARDVEKA---TELKS------------I---KDSRVHVLPLTV 60 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCE---EEEEESSGGGC---HHHHT------------C---CCTTEEEEECCT
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcE---EEEEecCHHHH---HHHHh------------c---cCCceEEEEeec
Confidence 57899999999999999999999998 55 89999864321 11110 0 125789999999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCcccC-c-------cccHHHHhhccccc------------------
Q psy14522 206 SLPGLGLSAADRAVLRR---------NVTVVFHGAATVR-F-------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~---------~vd~Vih~A~~~~-~-------~~~~~~~~~~Nv~g------------------ 250 (298)
+++. .+..+++ ++|+||||||... . ...+...+++|+.|
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~ 134 (250)
T 1yo6_A 61 TCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASK 134 (250)
T ss_dssp TCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHS
T ss_pred CCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccc
Confidence 9865 4554444 7999999999754 1 12344455666544
Q ss_pred -----------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -----------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -----------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+...... +. .+..+...|..+|+..+.+.+.+
T Consensus 135 ~~~~~~~~~~~~iv~isS~~~~~~~~~--~~---~~~~~~~~Y~~sK~a~~~~~~~l 186 (250)
T 1yo6_A 135 ESGDQLSVSRAAVITISSGLGSITDNT--SG---SAQFPVLAYRMSKAAINMFGRTL 186 (250)
T ss_dssp SCSSCCCTTTCEEEEECCGGGCSTTCC--ST---TSSSCBHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccCCCcEEEEeccCccccCCcc--cc---cccCCccHHHHHHHHHHHHHHHH
Confidence 4899999865432211 11 11123456888888888877654
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-14 Score=126.71 Aligned_cols=135 Identities=18% Similarity=0.200 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |++++|+... .+.+.+.+.. ....++.++.+|++
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~---V~~~~r~~~~---~~~~~~~l~~-----------~~~~~~~~~~~Dl~ 86 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQ---CVIASRKMDV---LKATAEQISS-----------QTGNKVHAIQCDVR 86 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHSSCEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHH-----------hcCCceEEEEeCCC
Confidence 57899999999999999999999999876 8888886321 1111111110 01257899999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
++. .+..++ .++|+||||||.... ...+...+++|+.| +||
T Consensus 87 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv 160 (302)
T 1w6u_A 87 DPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFL 160 (302)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 865 444443 357999999996432 13345566777665 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+++... ..++..|..+|...|.+.+.+
T Consensus 161 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 191 (302)
T 1w6u_A 161 SITTIYAETG------------SGFVVPSASAKAGVEAMSKSL 191 (302)
T ss_dssp EECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcccccccC------------CCCcchhHHHHHHHHHHHHHH
Confidence 9999866422 123456788888888876654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=8.9e-14 Score=121.71 Aligned_cols=132 Identities=14% Similarity=0.078 Sum_probs=91.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~~~ 63 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDA---TAKAVASEIN------------QAGGHAVAVKVDVSDR 63 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTTSH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEEecCCCH
Confidence 578999999999999999999999876 888888632 1112211111 1124688999999986
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEE
Q psy14522 209 GLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHV 255 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~i 255 (298)
. .+..+++ ++|++|||||.... ...+...+++|+.| +||++
T Consensus 64 ~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 137 (256)
T 1geg_A 64 D------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 137 (256)
T ss_dssp H------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5 4555544 79999999996532 13445567777765 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||..+... ......|..+|...+.+.+.+
T Consensus 138 sS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 166 (256)
T 1geg_A 138 CSQAGHVG------------NPELAVYSSSKFAVRGLTQTA 166 (256)
T ss_dssp CCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CchhhcCC------------CCCchhHHHHHHHHHHHHHHH
Confidence 99865422 112456777888777776543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.5e-13 Score=117.87 Aligned_cols=137 Identities=12% Similarity=0.149 Sum_probs=92.3
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+++|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. ....+..++.+|
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~d 72 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGAS---VVLLGRTEAS---LAEVSDQIKS-----------AGQPQPLIIALN 72 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------TTSCCCEEEECC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEecCHHH---HHHHHHHHHh-----------cCCCCceEEEec
Confidence 3467899999999999999999999999876 8888886321 1222222211 112456777777
Q ss_pred C--CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------
Q psy14522 205 V--SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG----------------- 250 (298)
Q Consensus 205 l--~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g----------------- 250 (298)
+ ++.. .+..+ ..++|++|||||..... ..+...+++|+.|
T Consensus 73 ~d~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 146 (247)
T 3i1j_A 73 LENATAQ------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED 146 (247)
T ss_dssp TTTCCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred cccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 7 5543 33333 34799999999975321 3456678888888
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||..+... ...+..|..+|...+.+.+.+
T Consensus 147 ~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 181 (247)
T 3i1j_A 147 ASIAFTSSSVGRKG------------RANWGAYGVSKFATEGLMQTL 181 (247)
T ss_dssp EEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcchhhcCC------------CCCcchhHHHHHHHHHHHHHH
Confidence 8999999865432 123456777888777776543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-13 Score=120.46 Aligned_cols=138 Identities=17% Similarity=0.199 Sum_probs=93.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|++.|++ |+++.|+.. ..+.+.+.+.. . ....++.++.+|++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~--------~--~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTVG---NIEELAAECKS--------A--GYPGTLIPYRCDLS 93 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH--------T--TCSSEEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECChH---HHHHHHHHHHh--------c--CCCceEEEEEecCC
Confidence 57899999999999999999999999876 888888632 11122111110 0 01145788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc--------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG--------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------------~~ 252 (298)
++. .+..+++ ++|+||||||.... ...+...+++|+.| +|
T Consensus 94 ~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~i 167 (279)
T 1xg5_A 94 NEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHI 167 (279)
T ss_dssp CHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEE
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceE
Confidence 865 4444443 79999999996532 12345566666655 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... .|......|..+|+..+.+.+.+
T Consensus 168 v~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 1xg5_A 168 ININSMSGHRV----------LPLSVTHFYSATKYAVTALTEGL 201 (279)
T ss_dssp EEECCGGGTSC----------CSCGGGHHHHHHHHHHHHHHHHH
T ss_pred EEEcChhhccc----------CCCCCCchhHHHHHHHHHHHHHH
Confidence 99999865421 12334567888888877776543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=123.09 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=90.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+.. .....+.++.+|++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~Dv~ 93 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYS---VVITGRRPDV---LDAAAGEIGG-----------RTGNIVRAVVCDVG 93 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHSSCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh-----------cCCCeEEEEEcCCC
Confidence 56899999999999999999999999876 8888886321 1222222111 01134588999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc--------------------e
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG--------------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g--------------------~ 251 (298)
+++ .+..++ .++|++|||||.... ...++..+++|+.| +
T Consensus 94 d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~ 167 (281)
T 4dry_A 94 DPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGR 167 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcE
Confidence 875 444443 478999999997532 13456678888877 6
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 168 IV~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 200 (281)
T 4dry_A 168 IINNGSISAQTP------------RPNSAPYTATKHAITGLTKST 200 (281)
T ss_dssp EEEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHhCCC------------CCCChhHHHHHHHHHHHHHHH
Confidence 999999865422 223456777777777665543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.8e-14 Score=122.83 Aligned_cols=136 Identities=17% Similarity=0.168 Sum_probs=93.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+... ....++.++.+|++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~~----------~~~~~~~~~~~Dv~ 69 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA---VAFCARDGER---LRAAESALRQR----------FPGARLFASVCDVL 69 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHHH----------STTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHHh----------cCCceEEEEeCCCC
Confidence 56899999999999999999999999876 8888886321 12222211110 01135889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 143 (265)
T 3lf2_A 70 DAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVC 143 (265)
T ss_dssp CHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Confidence 865 444433 478999999997532 13456678889888 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 144 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 173 (265)
T 3lf2_A 144 VNSLLASQP------------EPHMVATSAARAGVKNLVRSM 173 (265)
T ss_dssp EEEGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ECCcccCCC------------CCCchhhHHHHHHHHHHHHHH
Confidence 999865422 123456777777777766543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=122.92 Aligned_cols=132 Identities=15% Similarity=0.104 Sum_probs=92.8
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+| +||+++++.|+++|.+ |+++.|+.. ..+.+.+.... ..++.++.+|
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D 88 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAE---VALTYLSET---FKKRVDPLAES-------------LGVKLTVPCD 88 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHHH-------------HTCCEEEECC
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE---EEEEeCChH---HHHHHHHHHHh-------------cCCeEEEEcC
Confidence 5689999999997 9999999999999876 888888743 22233322221 1356889999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g---------------- 250 (298)
+++++ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 89 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g 162 (296)
T 3k31_A 89 VSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGG 162 (296)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99875 444444 378999999997532 13456678888887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|...+.+.+.
T Consensus 163 ~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~ 195 (296)
T 3k31_A 163 SILTLSYYGAEKV------------VPHYNVMGVCKAALEASVKY 195 (296)
T ss_dssp EEEEEECGGGTSC------------CTTTTHHHHHHHHHHHHHHH
T ss_pred EEEEEEehhhccC------------CCCchhhHHHHHHHHHHHHH
Confidence 8999999865422 12244566777776666554
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-13 Score=121.46 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=95.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc------chhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK------TVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
.+.+|++|||||+|+||+++++.|++.|.+ |++++|+.... ...+++.+.... + .....++.
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~ 92 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGAD---IIAIDVCKQLDGVKLPMSTPDDLAETVRQ-----V----EALGRRII 92 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCCSCCCCHHHHHHHHHH-----H----HHTTCCEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecccccccccccccCHHHHHHHHHH-----H----HhcCCceE
Confidence 357899999999999999999999999876 88888763210 012222222111 0 01235789
Q ss_pred EEecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc--------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG-------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-------------- 250 (298)
++.+|++++. .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 93 ~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 166 (299)
T 3t7c_A 93 ASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMA 166 (299)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999999865 444443 3799999999975321 3456678889877
Q ss_pred -----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|...+.+.+.
T Consensus 167 ~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 204 (299)
T 3t7c_A 167 GKRGGSIVFTSSIGGLRG------------AENIGNYIASKHGLHGLMRT 204 (299)
T ss_dssp TTSCEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEECChhhccC------------CCCcchHHHHHHHHHHHHHH
Confidence 7999999865432 12244677777777666554
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=120.52 Aligned_cols=135 Identities=17% Similarity=0.219 Sum_probs=91.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+++||||+|+||++++++|+++|++ |+++.|... ...+.+.+.. .....++.++.+|+++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---v~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~Dl~~ 68 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYS---VTVTYHSDT--TAMETMKETY------------KDVEERLQFVQADVTK 68 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHT------------GGGGGGEEEEECCTTS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCE---EEEEcCCCh--HHHHHHHHHH------------HhcCCceEEEEecCCC
Confidence 4689999999999999999999999876 777766532 1122222211 1223578999999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccc--C---c----cccHHHHhhccccc------------------eEE
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATV--R---F----DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~--~---~----~~~~~~~~~~Nv~g------------------~~v 253 (298)
++ .+..+++ ++|++|||||.. . + ...+...+++|+.| ++|
T Consensus 69 ~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 142 (264)
T 3i4f_A 69 KE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRII 142 (264)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEE
Confidence 75 4554443 799999999942 1 1 13456678889888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||...... .+...+..|..+|...+.+.+.
T Consensus 143 ~iss~~~~~~----------~~~~~~~~Y~asKaa~~~~~~~ 174 (264)
T 3i4f_A 143 NYGFQGADSA----------PGWIYRSAFAAAKVGLVSLTKT 174 (264)
T ss_dssp EECCTTGGGC----------CCCTTCHHHHHHHHHHHHHHHH
T ss_pred EEeechhccc----------CCCCCCchhHHHHHHHHHHHHH
Confidence 9999743211 1122345677777777766654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=120.68 Aligned_cols=133 Identities=15% Similarity=0.141 Sum_probs=91.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~------------~~~~~~~~~~~D~~ 66 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNRE---ALEKAEASVR------------EKGVEARSYVCDVT 66 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------TTTSCEEEEECCTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEEecCC
Confidence 46899999999999999999999999876 888888632 1122211111 11247889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCccc-Cc-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATV-RF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~-~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++. .+..++ .++|++|||||.. .. ...+...+++|+.| +||
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 140 (262)
T 1zem_A 67 SEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIV 140 (262)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 444333 3799999999965 21 13456677888877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... ..+..|..+|...+.+.+.
T Consensus 141 ~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~ 170 (262)
T 1zem_A 141 NTASMAGVKGP------------PNMAAYGTSKGAIIALTET 170 (262)
T ss_dssp EECCHHHHSCC------------TTBHHHHHHHHHHHHHHHH
T ss_pred EEcchhhccCC------------CCCchHHHHHHHHHHHHHH
Confidence 99998654321 1234677777766666554
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.3e-13 Score=118.61 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=93.9
Q ss_pred hcCceeeecCCCC-CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTG-FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG-~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+++|++|||||+| .||++++++|+++|++ |+++.|.... .+...+.+. .....++.++.+|+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~-----------~~~~~~~~~~~~Dl 82 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGAD---VVISDYHERR---LGETRDQLA-----------DLGLGRVEAVVCDV 82 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH-----------TTCSSCEEEEECCT
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCE---EEEecCCHHH---HHHHHHHHH-----------hcCCCceEEEEeCC
Confidence 5789999999998 6999999999999876 8888886321 111111111 11225899999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~ 252 (298)
+++. .+..++ .++|++|||||..... ..+...+++|+.| +|
T Consensus 83 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 156 (266)
T 3o38_A 83 TSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVI 156 (266)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9865 444443 3789999999975321 3456678888877 69
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+... ...+..|..+|...+.+.+.+
T Consensus 157 v~~sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l 188 (266)
T 3o38_A 157 VNNASVLGWRA------------QHSQSHYAAAKAGVMALTRCS 188 (266)
T ss_dssp EEECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHcCC------------CCCCchHHHHHHHHHHHHHHH
Confidence 99999866432 123456777788777776543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=123.22 Aligned_cols=135 Identities=14% Similarity=0.177 Sum_probs=91.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+|+||||+|+||+++++.|+++|++ |++++|+... .+.+.+.+.. ....++.++.+|+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~Dl 87 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAH---VVVTARSKET---LQKVVSHCLE-----------LGAASAHYIAGTM 87 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HTCSEEEEEECCT
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHH-----------hCCCceEEEeCCC
Confidence 357899999999999999999999999876 8888886321 1122111110 0113688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEc-CcccCc------cccHHHHhhccccc-----------------eEEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHG-AATVRF------DENIKVAIAINIFG-----------------SFVH 254 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~-A~~~~~------~~~~~~~~~~Nv~g-----------------~~v~ 254 (298)
++.. .+..++ .++|++||| |+.... ...+...+++|+.| +||+
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~ 161 (286)
T 1xu9_A 88 EDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 161 (286)
T ss_dssp TCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEE
Confidence 9865 444433 379999999 565321 13345567888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|...+.+.+.
T Consensus 162 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~ 190 (286)
T 1xu9_A 162 VSSLAGKVA------------YPMVAAYSASKFALDGFFSS 190 (286)
T ss_dssp EEEGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred ECCcccccC------------CCCccHHHHHHHHHHHHHHH
Confidence 999865432 11345677788877777654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.9e-13 Score=120.04 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=92.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. . .....++.++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~--------~-~~~~~~~~~~~~Dv~ 68 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGAN---VTITGRSSE---RLEETRQIILK--------S-GVSEKQVNSVVADVT 68 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHT--------T-TCCGGGEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHH--------c-CCCCcceEEEEecCC
Confidence 46789999999999999999999999876 888888632 11111111110 0 000116889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-----------ccHHHHhhccccc-----------------e
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-----------ENIKVAIAINIFG-----------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-----------~~~~~~~~~Nv~g-----------------~ 251 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +
T Consensus 69 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~ 142 (280)
T 1xkq_A 69 TED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGE 142 (280)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCc
Confidence 865 444443 3799999999965321 2355677888877 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||++||+.+.... ...+..|..+|+..+.+.+.+
T Consensus 143 iv~isS~~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l 176 (280)
T 1xkq_A 143 IVNVSSIVAGPQA-----------QPDFLYYAIAKAALDQYTRST 176 (280)
T ss_dssp EEEECCGGGSSSC-----------CCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEecCccccCCC-----------CCcccHHHHHHHHHHHHHHHH
Confidence 9999998654321 012456777888777776543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-14 Score=125.90 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=78.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHH-hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLR-ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~-~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
++|+|+||||+|+||+++++.|++ .|++ |+++.|.... .+.+.+.+. ....++.++.+|++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dl~ 64 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---VVLTARDVTR---GQAAVQQLQ------------AEGLSPRFHQLDID 64 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE---EEEEESSHHH---HHHHHHHHH------------HTTCCCEEEECCTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCe---EEEEeCChHH---HHHHHHHHH------------hcCCeeEEEECCCC
Confidence 578999999999999999999999 7765 8888886321 111111111 01257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+.. .+..+++ ++|+||||||.... ...+...+++|+.| +||++|
T Consensus 65 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 65 DLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp CHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 865 4555444 79999999997532 23455678888877 899999
Q ss_pred CCcc
Q psy14522 257 TAYT 260 (298)
Q Consensus 257 S~~~ 260 (298)
|..+
T Consensus 139 S~~~ 142 (276)
T 1wma_A 139 SIMS 142 (276)
T ss_dssp CHHH
T ss_pred Chhh
Confidence 9744
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=121.09 Aligned_cols=141 Identities=16% Similarity=0.106 Sum_probs=90.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+..... .......++.++.+|++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~D~~ 73 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGAT---VAACDLDRAA---AQETVRLLGGPGS-----KEGPPRGNHAAFQADVS 73 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHTC-----------------CCEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHHHhcCc-----cccccCcceEEEEecCC
Confidence 46789999999999999999999999876 8888886321 1111111000000 00000146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------Cc-cEEEEcCcccCc-------cccHHHHhhccccc-------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NV-TVVFHGAATVRF-------DENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~v-d~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~ 252 (298)
++. .+..+++ ++ |+||||||.... ...+...+++|+.| +|
T Consensus 74 ~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 147 (264)
T 2pd6_A 74 EAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSI 147 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceE
Confidence 865 4444443 45 999999997542 13455667778766 69
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+++... ...+..|..+|+..+.+.+.+
T Consensus 148 v~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l 179 (264)
T 2pd6_A 148 INISSIVGKVG------------NVGQTNYAASKAGVIGLTQTA 179 (264)
T ss_dssp EEECCTHHHHC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EEECChhhccC------------CCCChhhHHHHHHHHHHHHHH
Confidence 99999865421 113456888888887776653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=121.78 Aligned_cols=137 Identities=12% Similarity=0.196 Sum_probs=94.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-ch---hHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-TV---SERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-~~---~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... .. .+...+.+. ....++.++.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 71 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGAN---VALVAKSAEPHPKLPGTIYTAAKEIE------------EAGGQALPIV 71 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHHH------------HHTSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECChhhhhhhhHHHHHHHHHHH------------hcCCcEEEEE
Confidence 46899999999999999999999999876 88899875421 11 112222111 1125788999
Q ss_pred cCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc------------------
Q psy14522 203 GDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------ 250 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------ 250 (298)
+|+++++ .+..+++ ++|++|||||..... ..+...+++|+.|
T Consensus 72 ~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 145 (285)
T 3sc4_A 72 GDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP 145 (285)
T ss_dssp CCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence 9999865 4444443 799999999975321 3456677888887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||..+.... ...+..|..+|...+.+.+.
T Consensus 146 ~iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~ 179 (285)
T 3sc4_A 146 HILTLSPPIRLEPK-----------WLRPTPYMMAKYGMTLCALG 179 (285)
T ss_dssp EEEECCCCCCCSGG-----------GSCSHHHHHHHHHHHHHHHH
T ss_pred EEEEECChhhccCC-----------CCCCchHHHHHHHHHHHHHH
Confidence 89999998654211 01235677777777666554
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-13 Score=125.10 Aligned_cols=140 Identities=13% Similarity=0.178 Sum_probs=96.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-h---hHHHHHHHHHHHHhhhhhcCccccCCeEEE
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-V---SERLDELFEDRLFSRLKAEVPHFRSKISVV 201 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~---~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v 201 (298)
.+.+|++|||||+|+||+++++.|+++|.+ |+++.|...... . .+...+.+. ....++.++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~---Vvl~~r~~~~~~~l~~~l~~~~~~~~------------~~g~~~~~~ 106 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGAN---IVIAAKTAQPHPKLLGTIYTAAEEIE------------AVGGKALPC 106 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHHH------------HTTCEEEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCE---EEEEECChhhhhhhHHHHHHHHHHHH------------hcCCeEEEE
Confidence 357899999999999999999999999876 888888754321 1 111111111 122578899
Q ss_pred ecCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-----------------
Q psy14522 202 TGDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------- 250 (298)
Q Consensus 202 ~~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------- 250 (298)
.+|+++++ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 107 ~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~ 180 (346)
T 3kvo_A 107 IVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKV 180 (346)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSS
T ss_pred EccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC
Confidence 99999875 444444 379999999997532 14456678899888
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+.... +...+..|..+|...+.+.+.+
T Consensus 181 g~IV~iSS~~~~~~~----------~~~~~~~Y~aSKaal~~l~~~l 217 (346)
T 3kvo_A 181 AHILNISPPLNLNPV----------WFKQHCAYTIAKYGMSMYVLGM 217 (346)
T ss_dssp CEEEEECCCCCCCGG----------GTSSSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCHHHcCCC----------CCCCchHHHHHHHHHHHHHHHH
Confidence 89999998654221 1123456777777777665543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=121.30 Aligned_cols=123 Identities=18% Similarity=0.230 Sum_probs=89.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|..... .....+.+|++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~Dv~ 76 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGAR---VAVADRAVAGI--------------------------AADLHLPGDLR 76 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECSSCCTTS--------------------------CCSEECCCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--------------------------HhhhccCcCCC
Confidence 56899999999999999999999999876 88888864321 12244578888
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..+ ..++|++|||||.... ...+...+++|+.| +||+
T Consensus 77 ~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~ 150 (266)
T 3uxy_A 77 EAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVN 150 (266)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 764 33333 3479999999997642 23456678899888 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|...+.+.+.+
T Consensus 151 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 180 (266)
T 3uxy_A 151 VASCWGLRP------------GPGHALYCLTKAALASLTQCM 180 (266)
T ss_dssp ECCSBTTBC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ECCHHhCCC------------CCCChHHHHHHHHHHHHHHHH
Confidence 999866422 223456777888777776543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.46 E-value=9.4e-14 Score=122.91 Aligned_cols=114 Identities=18% Similarity=0.239 Sum_probs=84.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
|+|+|||||||||+++++.|+++ |++ |++++|+.... ..+. ..+++++.+|+++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~---~~l~------------------~~~~~~~~~D~~d 56 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ---IIAIVRNVEKA---STLA------------------DQGVEVRHGDYNQ 56 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTT---HHHH------------------HTTCEEEECCTTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe---EEEEEcCHHHH---hHHh------------------hcCCeEEEeccCC
Confidence 57999999999999999999998 766 99999975421 1111 1467899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYP 273 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~ 273 (298)
+. .+..+++++|+|||+|+.. ... .+|+.+ +|||+||.++..
T Consensus 57 ~~------~l~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~----------- 112 (287)
T 2jl1_A 57 PE------SLQKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE----------- 112 (287)
T ss_dssp HH------HHHHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-----------
T ss_pred HH------HHHHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-----------
Confidence 75 7888899999999999963 111 112222 999999986531
Q ss_pred CCCChHHHHHHHHHHHHHHHhh
Q psy14522 274 PPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 274 ~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.| . .|..+|+.+|++++.
T Consensus 113 ~~-~---~y~~~K~~~E~~~~~ 130 (287)
T 2jl1_A 113 SI-I---PLAHVHLATEYAIRT 130 (287)
T ss_dssp CC-S---THHHHHHHHHHHHHH
T ss_pred CC-C---chHHHHHHHHHHHHH
Confidence 11 1 467889999998864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-13 Score=118.20 Aligned_cols=131 Identities=18% Similarity=0.202 Sum_probs=92.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|++.|.. .+|++..|+.. ..+.+.+.+ ..++.++.+|++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~~---~~~~~~~~~---------------~~~~~~~~~Dv~~~ 62 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSEA---PLKKLKEKY---------------GDRFFYVVGDITED 62 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCHH---HHHHHHHHH---------------GGGEEEEESCTTSH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCHH---HHHHHHHHh---------------CCceEEEECCCCCH
Confidence 689999999999999999999999743 34777777532 112221111 25788999999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc-----------------eEEEEe
Q psy14522 209 GLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 209 ~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
. .+..++ .++|++|||||.... ...+...+++|+.| ++|++|
T Consensus 63 ~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~is 136 (254)
T 3kzv_A 63 S------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVS 136 (254)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred H------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 5 444443 379999999997432 13456678889888 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|..+... ...+..|..+|...+.+.+.+
T Consensus 137 S~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 164 (254)
T 3kzv_A 137 SDACNMY------------FSSWGAYGSSKAALNHFAMTL 164 (254)
T ss_dssp CSCCCCS------------SCCSHHHHHHHHHHHHHHHHH
T ss_pred CchhccC------------CCCcchHHHHHHHHHHHHHHH
Confidence 9865432 223456777788777776543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-13 Score=120.47 Aligned_cols=136 Identities=9% Similarity=0.033 Sum_probs=91.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.+.... ..+...+.+. ....++.++.+|++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dv~ 68 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGAN---VVLTYNGAAE--GAATAVAEIE------------KLGRSALAIKADLT 68 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSSCH--HHHHHHHHHH------------TTTSCCEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHH------------hcCCceEEEEcCCC
Confidence 46899999999999999999999999876 7776443221 1112211111 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~i 255 (298)
++. .+..++ .++|++|||||.... ...+...+++|+.| +||++
T Consensus 69 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 69 NAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp CHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 875 444444 379999999986521 13456678899988 79999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
||+.+... +...+..|..+|...+.+.+.+
T Consensus 143 sS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~l 172 (259)
T 3edm_A 143 SSQAGRDG-----------GGPGALAYATSKGAVMTFTRGL 172 (259)
T ss_dssp CCHHHHHC-----------CSTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHhccC-----------CCCCcHHHHHHHHHHHHHHHHH
Confidence 99865411 1112446777777777666543
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.1e-13 Score=121.21 Aligned_cols=131 Identities=18% Similarity=0.231 Sum_probs=92.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ++++... ....++.++.+|++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 61 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGAR---VAVLDKSAE------RLRELEV------------AHGGNAVGVVGDVR 61 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HTBTTEEEEECCTT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCHH------HHHHHHH------------HcCCcEEEEEcCCC
Confidence 46899999999999999999999999876 888888632 2222211 11357899999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc------------ccHHHHhhccccc-----------------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD------------ENIKVAIAINIFG----------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~------------~~~~~~~~~Nv~g----------------- 250 (298)
++. .+..+ ..++|++|||||..... ..|+..+++|+.|
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g 135 (281)
T 3zv4_A 62 SLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG 135 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 865 34333 34789999999975321 1256678899988
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||+.+... ...+..|..+|...+.+.+.+
T Consensus 136 ~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 169 (281)
T 3zv4_A 136 SVVFTISNAGFYP------------NGGGPLYTATKHAVVGLVRQM 169 (281)
T ss_dssp EEEEECCGGGTSS------------SSSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecchhccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 8999999865421 122345777777777766543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=8.6e-14 Score=120.73 Aligned_cols=125 Identities=11% Similarity=0.016 Sum_probs=90.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+|+++||||+|+||+++++.|+++|++ |+++.|+..... ....++.+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~-------------------------~~~~~~~~D~~ 56 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWW---VASIDVVENEEA-------------------------SASVIVKMTDS 56 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSCCTTS-------------------------SEEEECCCCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCChhhcc-------------------------CCcEEEEcCCC
Confidence 35789999999999999999999999876 888888754210 23567789998
Q ss_pred CCCCCCCHHHHHHHh---------cCccEEEEcCcccCc-----c---ccHHHHhhccccc----------------eEE
Q psy14522 207 LPGLGLSAADRAVLR---------RNVTVVFHGAATVRF-----D---ENIKVAIAINIFG----------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~---------~~vd~Vih~A~~~~~-----~---~~~~~~~~~Nv~g----------------~~v 253 (298)
+++ .+..++ .++|++|||||.... . ..+...+++|+.| +||
T Consensus 57 ~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv 130 (241)
T 1dhr_A 57 FTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLT 130 (241)
T ss_dssp HHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEE
Confidence 764 444433 379999999996531 1 3345567788877 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
++||..+... ......|..+|...+.+.+.++
T Consensus 131 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la 162 (241)
T 1dhr_A 131 LAGAKAALDG------------TPGMIGYGMAKGAVHQLCQSLA 162 (241)
T ss_dssp EECCGGGGSC------------CTTBHHHHHHHHHHHHHHHHHT
T ss_pred EECCHHHccC------------CCCchHHHHHHHHHHHHHHHHH
Confidence 9999866432 1234568888888888776543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=118.55 Aligned_cols=120 Identities=16% Similarity=0.112 Sum_probs=88.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||++++++|+++|++ |+++.|+.. ..++.++.+|++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~---------------------------~~~~~~~~~D~~~~ 51 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRRE---------------------------GEDLIYVEGDVTRE 51 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCC---------------------------SSSSEEEECCTTCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEccCcc---------------------------ccceEEEeCCCCCH
Confidence 589999999999999999999999876 888888643 13568899999986
Q ss_pred CCCCCHHHHHHHhc------CccEEEEcCcccCcc-------c----cHHHHhhccccc---------------------
Q psy14522 209 GLGLSAADRAVLRR------NVTVVFHGAATVRFD-------E----NIKVAIAINIFG--------------------- 250 (298)
Q Consensus 209 ~~gl~~~~~~~l~~------~vd~Vih~A~~~~~~-------~----~~~~~~~~Nv~g--------------------- 250 (298)
. .+..+++ ++|++|||||..... . .+...+++|+.|
T Consensus 52 ~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 125 (242)
T 1uay_A 52 E------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG 125 (242)
T ss_dssp H------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred H------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 5 5655554 799999999975321 1 556667777665
Q ss_pred ---eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ---SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ---~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+.... ..+..|..+|...+.+.+.+
T Consensus 126 ~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l 162 (242)
T 1uay_A 126 QRGVIVNTASVAAFEGQ------------IGQAAYAASKGGVVALTLPA 162 (242)
T ss_dssp CSEEEEEECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCChhhccCC------------CCCchhhHHHHHHHHHHHHH
Confidence 58999998654321 12456777787777766543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-13 Score=121.38 Aligned_cols=135 Identities=13% Similarity=0.039 Sum_probs=91.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++||||+|+||++++++|++.|++ |+++.|... ...+....... ....++.++.+|+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl 84 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA---VAVSHSERN--DHVSTWLMHER------------DAGRDFKAYAVDV 84 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEECSCH--HHHHHHHHHHH------------TTTCCCEEEECCT
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCch--HHHHHHHHHHH------------hcCCceEEEEecC
Confidence 356889999999999999999999999876 777775432 11111111111 1235789999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
++.. .+..++ .++|++|||||..... ..+...+++|+.| +||
T Consensus 85 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv 158 (269)
T 3gk3_A 85 ADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIV 158 (269)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9865 444443 3799999999975321 3456678888887 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||..+... ...+..|..+|...+.+.+.
T Consensus 159 ~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 188 (269)
T 3gk3_A 159 NIGSVNGSRG------------AFGQANYASAKAGIHGFTKT 188 (269)
T ss_dssp EECCHHHHHC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred EeCChhhccC------------CCCcchHHHHHHHHHHHHHH
Confidence 9999755421 11345677777776666554
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=3.3e-13 Score=120.98 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. . .....++.++.+|++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~---~~~~~~~~l~~--------~-~~~~~~~~~~~~Dv~ 88 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ---VTITGRNED---RLEETKQQILK--------A-GVPAEKINAVVADVT 88 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH--------T-TCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHh--------c-CCCCceEEEEecCCC
Confidence 46899999999999999999999999876 888888632 11122111110 0 000016889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc---------ccHHHHhhccccc-----------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD---------ENIKVAIAINIFG-----------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g-----------------~~v 253 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||
T Consensus 89 d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV 162 (297)
T 1xhl_A 89 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIV 162 (297)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEE
Confidence 865 444443 3799999999964321 2455677888877 799
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+.... . ..+..|..+|+..+.+.+.+
T Consensus 163 ~isS~~~~~~~---------~--~~~~~Y~asKaa~~~l~~~l 194 (297)
T 1xhl_A 163 NVSSIVAGPQA---------H--SGYPYYACAKAALDQYTRCT 194 (297)
T ss_dssp EECCGGGSSSC---------C--TTSHHHHHHHHHHHHHHHHH
T ss_pred EEcCchhccCC---------C--CCcchHHHHHHHHHHHHHHH
Confidence 99998654321 0 12456778888877776543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=121.70 Aligned_cols=134 Identities=15% Similarity=0.071 Sum_probs=90.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dv~ 81 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEEG---LRTTLKELR------------EAGVEADGRTCDVR 81 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCceEEEECCCC
Confidence 46799999999999999999999999876 8888886321 111111111 11246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc--------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------------~~ 252 (298)
++. .+..+++ ++|++|||||..... ..+...+++|+.| +|
T Consensus 82 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~i 155 (277)
T 2rhc_B 82 SVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 155 (277)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEE
Confidence 865 4444443 799999999975321 2345566666654 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+... ......|..+|...+.+.+.+
T Consensus 156 v~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 187 (277)
T 2rhc_B 156 VNIASTGGKQG------------VVHAAPYSASKHGVVGFTKAL 187 (277)
T ss_dssp EEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEECccccccC------------CCCCccHHHHHHHHHHHHHHH
Confidence 99999865421 112346777788777766543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.9e-13 Score=120.10 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=92.8
Q ss_pred hcCceeeecCCCCC--CchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF--MGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~--iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++||||+|+ ||+++++.|+++|++ |+++.|... .+.+++... ...++.++.+|
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~----~~~~~~l~~-------------~~~~~~~~~~D 83 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAE---LAFTYVGQF----KDRVEKLCA-------------EFNPAAVLPCD 83 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCE---EEEEECTTC----HHHHHHHHG-------------GGCCSEEEECC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCE---EEEeeCchH----HHHHHHHHH-------------hcCCceEEEee
Confidence 56899999999966 999999999999876 888888751 222222211 11468899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc------------cccHHHHhhccccc---------------
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF------------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g--------------- 250 (298)
+++.+ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 84 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 157 (280)
T 3nrc_A 84 VISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR 157 (280)
T ss_dssp TTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99865 444443 368999999997542 13345567888877
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 158 ~g~iv~isS~~~~~~------------~~~~~~Y~asKaal~~~~~~l 193 (280)
T 3nrc_A 158 NASMVALTYIGAEKA------------MPSYNTMGVAKASLEATVRYT 193 (280)
T ss_dssp TCEEEEEECGGGTSC------------CTTTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccccccC------------CCCchhhHHHHHHHHHHHHHH
Confidence 8999999865422 223556777888777776543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=121.31 Aligned_cols=139 Identities=9% Similarity=0.113 Sum_probs=95.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-ch---hHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-TV---SERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-~~---~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+.+|+++||||+|+||+++++.|+++|.+ |+++.|+.... .. .+...+.+. ....++.++.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 68 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGAN---VAIAAKSAVANPKLPGTIHSAAAAVN------------AAGGQGLALK 68 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCSCCTTSCCCHHHHHHHHH------------HHTSEEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeccchhhhhhHHHHHHHHHHHH------------hcCCeEEEEe
Confidence 46899999999999999999999999876 88888875431 11 122222111 1125788999
Q ss_pred cCCCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------
Q psy14522 203 GDVSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------ 250 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------ 250 (298)
+|++++. .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 69 ~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 142 (274)
T 3e03_A 69 CDIREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP 142 (274)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc
Confidence 9999865 444443 379999999997532 13456678889888
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+.... +...+..|..+|...+.+.+.+
T Consensus 143 ~iv~isS~~~~~~~----------~~~~~~~Y~asKaal~~l~~~l 178 (274)
T 3e03_A 143 HILTLAPPPSLNPA----------WWGAHTGYTLAKMGMSLVTLGL 178 (274)
T ss_dssp EEEECCCCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHH
T ss_pred eEEEECChHhcCCC----------CCCCCchHHHHHHHHHHHHHHH
Confidence 89999998553210 0123456777888777666543
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.3e-14 Score=120.85 Aligned_cols=127 Identities=13% Similarity=0.059 Sum_probs=77.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|||||||||+++++.|+++|++ |++++|+... +... ..+++++.+|++++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~------~~~~----------------~~~~~~~~~D~~d~~ 55 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHE---VTAIVRNAGK------ITQT----------------HKDINILQKDIFDLT 55 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCSHH------HHHH----------------CSSSEEEECCGGGCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCE---EEEEEcCchh------hhhc----------------cCCCeEEeccccChh
Confidence 57999999999999999999999876 9999997431 1110 157899999999987
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCcccc--H---HHH---hhccccceEEEEeCCcccC---CCCCccCcCCCCCCCh
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDEN--I---KVA---IAINIFGSFVHVSTAYTHC---PRQEIDEVFYPPPYDY 278 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~--~---~~~---~~~Nv~g~~v~iSS~~~~~---~~~~~~E~~~~~p~~~ 278 (298)
. ..+.++|+|||+||....... . ..+ ....-.+++|++||..+.. ...+..|+.+..|.+.
T Consensus 56 ------~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 127 (221)
T 3ew7_A 56 ------L--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY 127 (221)
T ss_dssp ------H--HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred ------h--hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence 3 566899999999997432111 0 011 1111011999999975432 2223445544444444
Q ss_pred HHHHHHHHHHHHHH
Q psy14522 279 KDFMELVMSRSDDN 292 (298)
Q Consensus 279 y~~yk~sK~~aE~~ 292 (298)
|..+|+.+|.+
T Consensus 128 ---y~~~k~~~e~~ 138 (221)
T 3ew7_A 128 ---YPTARAQAKQL 138 (221)
T ss_dssp ---SCCHHHHHHHH
T ss_pred ---HHHHHHHHHHH
Confidence 45567777765
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.9e-13 Score=118.71 Aligned_cols=111 Identities=17% Similarity=0.104 Sum_probs=82.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+++||+++++.|+++|.+ |++..|+.. ..++..+.+. ....++..+.+|++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vvi~~~~~~---~~~~~~~~l~------------~~g~~~~~~~~Dv~ 68 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGAR---VILNDIRAT---LLAESVDTLT------------RKGYDAHGVAFDVT 68 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCHH---HHHHHHHHHH------------HTTCCEEECCCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEeeCC
Confidence 57999999999999999999999999876 888888532 1222222221 11357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ +++.++ .++|++|||||.... .+.|+..+++|+.| ++|
T Consensus 69 ~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IV 142 (255)
T 4g81_D 69 DEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKII 142 (255)
T ss_dssp CHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEE
Confidence 875 444443 369999999997532 14667788999988 899
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||+.+.
T Consensus 143 nisS~~~~ 150 (255)
T 4g81_D 143 NIGSLTSQ 150 (255)
T ss_dssp EECCGGGT
T ss_pred EEeehhhc
Confidence 99998765
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-13 Score=118.82 Aligned_cols=122 Identities=16% Similarity=0.118 Sum_probs=86.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... ..+..+.+|++
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~D~~ 63 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHK---VAVTHRGSGAP--------------------------KGLFGVEVDVT 63 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSSCCC--------------------------TTSEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH--------------------------HHhcCeeccCC
Confidence 56899999999999999999999999876 88888864321 12224788999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 64 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 137 (247)
T 1uzm_A 64 DSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIF 137 (247)
T ss_dssp CHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 865 444443 368999999997532 13456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... ..+..|..+|+..+.+.+.
T Consensus 138 isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 166 (247)
T 1uzm_A 138 IGSVSGLWGI------------GNQANYAASKAGVIGMARS 166 (247)
T ss_dssp ECCCCC-----------------CCHHHHHHHHHHHHHHHH
T ss_pred ECCHhhccCC------------CCChhHHHHHHHHHHHHHH
Confidence 9998654211 1234577777776666554
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=120.08 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=88.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. .. ....++.++.+|++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~--------~~-~~~~~~~~~~~Dv~ 69 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYR---VVLIARSKQ---NLEKVHDEIMR--------SN-KHVQEPIVLPLDIT 69 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCE---EEEEESCHH---HHHHHHHHHHH--------HC-TTSCCCEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHH--------hc-cccCcceEEeccCC
Confidence 46899999999999999999999999876 888888632 11222221111 00 01157889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc---c---ccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF---D---ENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~---~---~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+.. .+..++ .++|++|||||.... . ..+...+++|+.| ++|++
T Consensus 70 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~i 143 (250)
T 3nyw_A 70 DCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNV 143 (250)
T ss_dssp CHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 865 444443 379999999997532 1 3456678889887 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+... ..+ ...|..+|...+.+.+.
T Consensus 144 sS~~~~~~---------~~~---~~~Y~asKaa~~~l~~~ 171 (250)
T 3nyw_A 144 ASRAAKYG---------FAD---GGIYGSTKFALLGLAES 171 (250)
T ss_dssp CC----------------CC---TTHHHHHHHHHHHHHHH
T ss_pred ccHHhcCC---------CCC---CcchHHHHHHHHHHHHH
Confidence 99865421 112 34566666666665543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=120.07 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=91.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.... ..+.++.+|++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~Dl~ 69 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDK---VAITYRSGEPP--------------------------EGFLAVKCDIT 69 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSCCC--------------------------TTSEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHhh--------------------------ccceEEEecCC
Confidence 46899999999999999999999999876 88888864321 24678899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| +||+
T Consensus 70 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 143 (253)
T 2nm0_A 70 DTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVL 143 (253)
T ss_dssp SHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 444443 358999999997532 24566777888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ......|..+|...+.+.+.+
T Consensus 144 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l 173 (253)
T 2nm0_A 144 ISSVVGLLG------------SAGQANYAASKAGLVGFARSL 173 (253)
T ss_dssp ECCCCCCCC------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ECchhhCCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 999865421 123567888888888776643
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.9e-14 Score=125.51 Aligned_cols=114 Identities=15% Similarity=0.210 Sum_probs=82.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|.+ |+++.|.....+..+.+.+.+. ....++.++.+|++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dv~ 73 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVN---LVLHYHQAKDSDTANKLKDELE------------DQGAKVALYQSDLS 73 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCE---EEEEESCGGGHHHHHHHHHHHH------------TTTCEEEEEECCCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecCccCHHHHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 46899999999999999999999999876 8888775433222223222221 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.| ++|++|
T Consensus 74 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 74 NEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp SHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 875 455444 379999999997532 13456677888887 899999
Q ss_pred CCccc
Q psy14522 257 TAYTH 261 (298)
Q Consensus 257 S~~~~ 261 (298)
|..+.
T Consensus 148 S~~~~ 152 (262)
T 3ksu_A 148 TSLLA 152 (262)
T ss_dssp CCHHH
T ss_pred chhhc
Confidence 98543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-13 Score=121.02 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=92.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+|+||||+|+||+++++.|+++|.+ |+++.|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~---~~~~~~~~l~------------~~~~~~~~~~~Dl~ 103 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSH---VICISRTQK---SCDSVVDEIK------------SFGYESSGYAGDVS 103 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSE---EEEEESSHH---HHHHHHHHHH------------TTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCE---EEEEcCCHH---HHHHHHHHHH------------hcCCceeEEECCCC
Confidence 46789999999999999999999999866 888777532 1112111111 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..++ .++|+||||||.... ...+...+++|+.| +||+
T Consensus 104 d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~ 177 (285)
T 2c07_A 104 KKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIIN 177 (285)
T ss_dssp CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 865 455544 479999999997532 13455677888887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+.... ..+..|..+|...+.+.+.+
T Consensus 178 isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l 207 (285)
T 2c07_A 178 ISSIVGLTGN------------VGQANYSSSKAGVIGFTKSL 207 (285)
T ss_dssp ECCTHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred ECChhhccCC------------CCCchHHHHHHHHHHHHHHH
Confidence 9998553211 12346777788777766543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=123.76 Aligned_cols=138 Identities=14% Similarity=0.140 Sum_probs=93.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|+||||+|+||+++++.|+++|++ |+++.|.........+..+.... ......++.++.+|+++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~---v~~v~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Dv~d~ 69 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQ---SFKVYATLRDLKTQGRLWEAARA---------LACPPGSLETLQLDVRDS 69 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTC---CEEEEEEESCGGGTHHHHHHHHH---------TTCCTTSEEEEECCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCc---eEEEEeecCcHHHHHHHHHHhhh---------ccCCCCceEEEEecCCCH
Confidence 689999999999999999999999877 56666543222211111111100 001125788999999987
Q ss_pred CCCCCHHHHHHHhc-----CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 209 GLGLSAADRAVLRR-----NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-----~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
. .+..+++ ++|++|||||.... ...+...+++|+.| +||++||+
T Consensus 70 ~------~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~ 143 (327)
T 1jtv_A 70 K------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV 143 (327)
T ss_dssp H------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred H------HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 5 6666665 48999999996432 13456678889887 89999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.... .....|..+|+..+.+.+.+
T Consensus 144 ~~~~~~------------~~~~~Y~aSK~a~~~~~~~l 169 (327)
T 1jtv_A 144 GGLMGL------------PFNDVYCASKFALEGLCESL 169 (327)
T ss_dssp GGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred ccccCC------------CCChHHHHHHHHHHHHHHHH
Confidence 664321 12356888888888776643
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.9e-13 Score=118.73 Aligned_cols=123 Identities=18% Similarity=0.159 Sum_probs=90.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHH-hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLR-ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~-~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
++|++|||||+|+||+++++.|++ .|.. |++..|.... ....+.++.+|++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~---v~~~~~~~~~-------------------------~~~~~~~~~~Dv~ 54 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHT---VINIDIQQSF-------------------------SAENLKFIKADLT 54 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEE---EEEEESSCCC-------------------------CCTTEEEEECCTT
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcE---EEEecccccc-------------------------ccccceEEecCcC
Confidence 478999999999999999999998 5544 7887776431 1146789999999
Q ss_pred CCCCCCCHHHHHHHhc-----CccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLRR-----NVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-----~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iSS~ 258 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| ++|++||.
T Consensus 55 ~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~ 128 (244)
T 4e4y_A 55 KQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD 128 (244)
T ss_dssp CHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred CHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence 875 5555554 78999999997532 13456678899888 79999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+... ...+..|..+|...+.+.+.+
T Consensus 129 ~~~~~------------~~~~~~Y~asKaa~~~~~~~l 154 (244)
T 4e4y_A 129 QCFIA------------KPNSFAYTLSKGAIAQMTKSL 154 (244)
T ss_dssp GGTCC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred HHccC------------CCCCchhHHHHHHHHHHHHHH
Confidence 65422 122456777888777776543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.4e-13 Score=115.34 Aligned_cols=128 Identities=17% Similarity=0.215 Sum_probs=91.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|++|||||+|+||+++++.|+++|.+ |+++.|+.. ++++... ....++.++.+|+++..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~~ 60 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA---TYLTGRSES------KLSTVTN------------CLSNNVGYRARDLASHQ 60 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH------------TCSSCCCEEECCTTCHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HHhhccCeEeecCCCHH
Confidence 57999999999999999999999977 888888632 2222211 12357889999999876
Q ss_pred CCCCHHHHHHHhcCc----cEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLRRNV----TVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~~~v----d~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iSS~~~~ 261 (298)
.+..+++.+ |++|||||..... ..+...+++|+.| ++|++||..+.
T Consensus 61 ------~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~ 134 (230)
T 3guy_A 61 ------EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ 134 (230)
T ss_dssp ------HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT
T ss_pred ------HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC
Confidence 677776654 8999999975321 3455678888888 79999998654
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. ...+..|..+|...+.+.+.+
T Consensus 135 ~~------------~~~~~~Y~asKaa~~~~~~~l 157 (230)
T 3guy_A 135 QP------------KAQESTYCAVKWAVKGLIESV 157 (230)
T ss_dssp SC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred CC------------CCCCchhHHHHHHHHHHHHHH
Confidence 32 123456777787777766543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=123.98 Aligned_cols=137 Identities=15% Similarity=0.079 Sum_probs=93.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC-------CccchhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK-------KGKTVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~-------~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
+.+|++|||||+|+||+++++.|+++|.+ |++++|.. ......+.+.+.+. ....++.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 89 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSPASGGSAAQSVVDEIT------------AAGGEAV 89 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSSBTCTTSHHHHHHHHHH------------HTTCEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCcccccccccccHHHHHHHHHHHH------------hcCCcEE
Confidence 56899999999999999999999999876 88888751 11122222222221 1125788
Q ss_pred EEecCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc---------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------- 250 (298)
++.+|+++.. .+..+++ ++|++|||||..... ..+...+++|+.|
T Consensus 90 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 163 (322)
T 3qlj_A 90 ADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGL 163 (322)
T ss_dssp EECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999999865 4444443 799999999975421 3456677888765
Q ss_pred ---------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ---------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ---------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 164 ~~~~~~~~g~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 206 (322)
T 3qlj_A 164 SKAGKAVDGRIINTSSGAGLQG------------SVGQGNYSAAKAGIATLTLVG 206 (322)
T ss_dssp HHTTCCCCEEEEEECCHHHHHC------------BTTCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCcEEEEEcCHHHccC------------CCCCccHHHHHHHHHHHHHHH
Confidence 6999999755421 112456777777777766543
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=119.18 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=94.8
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|+++||||+ |+||++++++|++.|++ |+++.|..... ..+.+.+... ....++.++.+|
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~---v~~~~~~~~~~-~~~~~~~l~~------------~~~~~~~~~~~D 81 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAA---VAITYASRAQG-AEENVKELEK------------TYGIKAKAYKCQ 81 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCE---EEECBSSSSSH-HHHHHHHHHH------------HHCCCEECCBCC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEeCCcchh-HHHHHHHHHH------------hcCCceeEEecC
Confidence 578999999999 89999999999999876 88887765421 1122222111 112578999999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eE
Q psy14522 205 VSLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~ 252 (298)
++++. .+..++ .++|++|||||..... ..+...+++|+.| ++
T Consensus 82 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 155 (267)
T 3gdg_A 82 VDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSL 155 (267)
T ss_dssp TTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceE
Confidence 99865 444443 3689999999975321 3456678889887 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||..+.... +...+..|..+|...+.+.+.+
T Consensus 156 v~isS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~l 189 (267)
T 3gdg_A 156 VITASMSGHIAN----------FPQEQTSYNVAKAGCIHMARSL 189 (267)
T ss_dssp EEECCGGGTSCC----------SSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEccccccccC----------CCCCCCcchHHHHHHHHHHHHH
Confidence 999998654321 0112456777777777776543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=119.73 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=87.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEE-EecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISV-VTGDVS 206 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~-v~~Dl~ 206 (298)
+|+|+||||+|+||++++++|+++|++ |+++ .|+.. ..+.+.+.+.. ...++.. +.+|++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~---v~~~~~r~~~---~~~~~~~~~~~------------~~~~~~~~~~~D~~ 62 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA---LAIHYGQNRE---KAEEVAEEARR------------RGSPLVAVLGANLL 62 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESSCHH---HHHHHHHHHHH------------TTCSCEEEEECCTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHHHh------------cCCceEEEEeccCC
Confidence 468999999999999999999999876 7776 67532 11122111110 1235666 899999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.. .+..+ +.++|+||||||.... ...+...+++|+.| +||+
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T 2ph3_A 63 EAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVN 136 (245)
T ss_dssp SHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 44444 3479999999997532 13455667888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... ..+..|..+|...+.+.+.
T Consensus 137 ~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 165 (245)
T 2ph3_A 137 ITSVVGILGN------------PGQANYVASKAGLIGFTRA 165 (245)
T ss_dssp ECCTHHHHCC------------SSBHHHHHHHHHHHHHHHH
T ss_pred EeChhhccCC------------CCCcchHHHHHHHHHHHHH
Confidence 9998543211 1234577777777666554
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.3e-13 Score=117.64 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=91.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+. |++|||||+|+||+++++.|+++|++ |+++.|+.. ++++.... +. .. .++.++.+|++
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~---V~~~~r~~~------~~~~~~~~-----~~----~~-~~~~~~~~Dv~ 79 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWS---LVLTGRREE------RLQALAGE-----LS----AK-TRVLPLTLDVR 79 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HT----TT-SCEEEEECCTT
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----hh----cC-CcEEEEEcCCC
Confidence 45 89999999999999999999999876 888888632 22221110 10 01 47889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc-------------------eE
Q psy14522 207 LPGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g-------------------~~ 252 (298)
++. .+..+++ ++|++|||||.... ...+...+++|+.| +|
T Consensus 80 d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~I 153 (272)
T 2nwq_A 80 DRA------AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASI 153 (272)
T ss_dssp CHH------HHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 875 5666654 46999999997532 13455667888776 79
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|++||+.+... ...+..|..+|...+.+.+.+
T Consensus 154 V~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 185 (272)
T 2nwq_A 154 VNLGSVAGKWP------------YPGSHVYGGTKAFVEQFSLNL 185 (272)
T ss_dssp EEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCchhccC------------CCCCchHHHHHHHHHHHHHHH
Confidence 99999865421 112456788888888776654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=119.35 Aligned_cols=128 Identities=17% Similarity=0.133 Sum_probs=89.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+|+||+++++.|+++|++ |+++.|... ...+ ....++.++.+|++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~---------------~~~~~~~~~~~D~~ 62 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQ---VVVLDIRGE------DVVA---------------DLGDRARFAAADVT 62 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCH------HHHH---------------HTCTTEEEEECCTT
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCchH------HHHH---------------hcCCceEEEECCCC
Confidence 46899999999999999999999999876 888888421 1111 11257899999999
Q ss_pred CCCCCCCHHHHHHHh------cCccEEEEcCcccCc-----------cccHHHHhhccccc-------------------
Q psy14522 207 LPGLGLSAADRAVLR------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g------------------- 250 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 63 ~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~ 136 (257)
T 3tl3_A 63 DEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVG 136 (257)
T ss_dssp CHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC-
T ss_pred CHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccc
Confidence 865 444444 389999999997421 13456677888766
Q ss_pred -------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 -------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 -------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+.. +...+..|..+|...+.+.+.+
T Consensus 137 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~l 177 (257)
T 3tl3_A 137 PNAEERGVIINTASVAAFD------------GQIGQAAYSASKGGVVGMTLPI 177 (257)
T ss_dssp -CCCCSEEEEEECCCC--C------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcEEEEEcchhhcC------------CCCCCccHHHHHHHHHHHHHHH
Confidence 499999986542 2224667888888777766543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.8e-13 Score=119.72 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=91.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++.... ..++.++.+|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~Dv~ 64 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGAR---VVICDKDES------GGRALEQE-------------LPGAVFILCDVT 64 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------CTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-------------hcCCeEEEcCCC
Confidence 46899999999999999999999999876 888888632 12111110 135788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~v~ 254 (298)
++. .+..++ .++|++|||||..... ..+...+++|+.| +||+
T Consensus 65 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~ 138 (270)
T 1yde_A 65 QED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVIN 138 (270)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 865 444444 3799999999975321 2356677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+.... ..+..|..+|+..+.+.+.+
T Consensus 139 isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~l 168 (270)
T 1yde_A 139 ISSLVGAIGQ------------AQAVPYVATKGAVTAMTKAL 168 (270)
T ss_dssp ECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred EcCccccCCC------------CCCcccHHHHHHHHHHHHHH
Confidence 9997543211 12346777888877776543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-13 Score=114.59 Aligned_cols=114 Identities=17% Similarity=0.187 Sum_probs=84.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|+ +|++ |+++.|... .+.+|++++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~---V~~~~r~~~--------------------------------~~~~D~~~~~ 47 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAE---VITAGRHSG--------------------------------DVTVDITNID 47 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSE---EEEEESSSS--------------------------------SEECCTTCHH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCe---EEEEecCcc--------------------------------ceeeecCCHH
Confidence 489999999999999999999 8866 888888531 3578998865
Q ss_pred CCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCcccCC
Q psy14522 210 LGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAYTHCP 263 (298)
Q Consensus 210 ~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~ 263 (298)
.++.+++ ++|+||||||..... ..+...+++|+.| +||++||.++...
T Consensus 48 ------~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~ 121 (202)
T 3d7l_A 48 ------SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP 121 (202)
T ss_dssp ------HHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC
T ss_pred ------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC
Confidence 5665554 489999999965321 2334566788776 8899999865421
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
...+..|..+|...|.+.+.++
T Consensus 122 ------------~~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 122 ------------IVQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp ------------CTTCHHHHHHHHHHHHHHHHHT
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHH
Confidence 2234678888999998887653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=118.70 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=82.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|.....+ .+++... ...++.++.+|++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vv~~~r~~~~~~---~~~~~~~-------------~~~~~~~~~~Dv~ 65 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAI---PVVFARHAPDGA---FLDALAQ-------------RQPRATYLPVELQ 65 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCCHH---HHHHHHH-------------HCTTCEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCcccHH---HHHHHHh-------------cCCCEEEEEeecC
Confidence 57999999999999999999999999876 888888765322 2222111 1257889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc------cccHHHHhhccccc-----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF------DENIKVAIAINIFG-----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g-----------------~~v~iS 256 (298)
++. +++.+ +.++|++|||||.... .+.|...+++|+.| ++|++|
T Consensus 66 ~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnis 139 (258)
T 4gkb_A 66 DDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNIS 139 (258)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 865 33333 3479999999997421 24566778899988 999999
Q ss_pred CCccc
Q psy14522 257 TAYTH 261 (298)
Q Consensus 257 S~~~~ 261 (298)
|+.+.
T Consensus 140 S~~~~ 144 (258)
T 4gkb_A 140 SKTAV 144 (258)
T ss_dssp CTHHH
T ss_pred ehhhc
Confidence 99764
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-13 Score=119.49 Aligned_cols=135 Identities=11% Similarity=-0.004 Sum_probs=88.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++||||+|+||++++++|+++|++ |+++.+... ...+...+.+. ....++.++.+|+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~--~~~~~~~~~l~------------~~~~~~~~~~~Dl 85 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDA--AGAQETLNAIV------------ANGGNGRLLSFDV 85 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCch--HHHHHHHHHHH------------hcCCceEEEEecC
Confidence 356889999999999999999999999876 655443321 11111111111 1125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SF 252 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~ 252 (298)
++++ .+..+++ ++|++|||||..... ..+...+++|+.| +|
T Consensus 86 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 159 (267)
T 4iiu_A 86 ANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRI 159 (267)
T ss_dssp TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9865 4444443 799999999975421 3455677888776 89
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|++||..+... ...+..|..+|...+.+.+.
T Consensus 160 v~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 190 (267)
T 4iiu_A 160 ITLSSVSGVMG------------NRGQVNYSAAKAGIIGATKA 190 (267)
T ss_dssp EEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EEEcchHhccC------------CCCCchhHHHHHHHHHHHHH
Confidence 99999755421 11234566777755555443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=4.8e-13 Score=117.69 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=91.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+...+.+. .. ....++.++.+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~--------~~--~~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAK---VALVDWNLEA---GVQCKAALH--------EQ--FEPQKTLFIQCDVA 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHT--------TT--SCGGGEEEEECCTT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH--------hh--cCCCceEEEecCCC
Confidence 45789999999999999999999999876 8888886321 111111111 00 01246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCccccHHHHhhccccc---------------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFDENIKVAIAINIFG---------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------------~~v~iSS~ 258 (298)
++. .+..++ .++|++|||||... ...+...+++|+.| +||++||+
T Consensus 69 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 141 (267)
T 2gdz_A 69 DQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 141 (267)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence 865 444443 36899999999754 35566666777654 69999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+.... .....|..+|...+.+.+.
T Consensus 142 ~~~~~~------------~~~~~Y~~sK~a~~~~~~~ 166 (267)
T 2gdz_A 142 AGLMPV------------AQQPVYCASKHGIVGFTRS 166 (267)
T ss_dssp GGTSCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred cccCCC------------CCCchHHHHHHHHHHHHHH
Confidence 765321 1234577788877776654
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.1e-13 Score=119.85 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=89.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+... .+.+.+.+. .. .++.++.+|++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~~-~~~~~~~~Dv~ 87 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGAR---VFICARDAEA---CADTATRLS------------AY-GDCQAIPADLS 87 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCHHH---HHHHHHHHT------------TS-SCEEECCCCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hc-CceEEEEeeCC
Confidence 46899999999999999999999999876 8888886321 111111110 11 26888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc----------------------
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG---------------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g---------------------- 250 (298)
+++ .+..++ .++|++|||||.... ...+...+++|+.|
T Consensus 88 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g 161 (276)
T 2b4q_A 88 SEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA 161 (276)
T ss_dssp SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC
Confidence 865 444443 379999999996532 13455667777765
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+.... ++.. ..|..+|+..+.+.+.+
T Consensus 162 ~iV~isS~~~~~~~---------~~~~--~~Y~asK~a~~~~~~~l 196 (276)
T 2b4q_A 162 RVINIGSVAGISAM---------GEQA--YAYGPSKAALHQLSRML 196 (276)
T ss_dssp EEEEECCGGGTCCC---------CCSC--TTHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHcCCC---------CCCc--cccHHHHHHHHHHHHHH
Confidence 69999998664321 1111 04666777777666543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-13 Score=116.22 Aligned_cols=135 Identities=11% Similarity=0.088 Sum_probs=90.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.+... ...++..+.+. ....++.++.+|++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~ 67 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRK--EEAEETVYEIQ------------SNGGSAFSIGANLE 67 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCS--HHHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCch--HHHHHHHHHHH------------hcCCceEEEecCcC
Confidence 56899999999999999999999999876 666533322 11112211111 11257888999999
Q ss_pred CCCCCCCHHHHHHHhc-------------CccEEEEcCcccCcc-------ccHHHHhhccccc----------------
Q psy14522 207 LPGLGLSAADRAVLRR-------------NVTVVFHGAATVRFD-------ENIKVAIAINIFG---------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g---------------- 250 (298)
+.. .+..+++ ++|++|||||..... ..+...+++|+.|
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 141 (255)
T 3icc_A 68 SLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS 141 (255)
T ss_dssp SHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred CHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCC
Confidence 864 3333322 399999999975321 3445677889887
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+... ...+..|..+|...+.+.+.+
T Consensus 142 ~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 175 (255)
T 3icc_A 142 RIINISSAATRIS------------LPDFIAYSMTKGAINTMTFTL 175 (255)
T ss_dssp EEEEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCChhhccC------------CCCcchhHHhHHHHHHHHHHH
Confidence 8999999865432 123456777888777766543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-13 Score=120.65 Aligned_cols=134 Identities=17% Similarity=0.147 Sum_probs=90.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
..+|+||||||+|+||++++++|++.|++ |+++ .|... ..+.+.+.+. ....++.++.+|+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~---V~~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~~~Dl 85 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR---VGVNYAANRE---AADAVVAAIT------------ESGGEAVAIPGDV 85 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHH------------HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCChh---HHHHHHHHHH------------hcCCcEEEEEcCC
Confidence 45789999999999999999999999876 6555 55421 1222222211 1125788999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc--------ccHHHHhhccccc--------------------
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD--------ENIKVAIAINIFG-------------------- 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-------------------- 250 (298)
++.. .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 86 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 159 (272)
T 4e3z_A 86 GNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG 159 (272)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence 9865 444443 3789999999976431 3455677888877
Q ss_pred -eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+.... ...+..|..+|...+.+.+.
T Consensus 160 g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~ 194 (272)
T 4e3z_A 160 GAIVNVSSMAAILGS-----------ATQYVDYAASKAAIDTFTIG 194 (272)
T ss_dssp EEEEEECCTHHHHCC-----------TTTCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcchHhccCC-----------CCCcchhHHHHHHHHHHHHH
Confidence 59999998654211 11234577778877776554
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.5e-13 Score=117.55 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=93.3
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+++|++|||||+++||+++++.|++.|.+ |++..|+. +++++... +...+...+.+|
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~---V~i~~r~~------~~l~~~~~------------~~g~~~~~~~~D 83 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGAR---VFITGRRK------DVLDAAIA------------EIGGGAVGIQAD 83 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH------------HHCTTCEEEECC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH------------HcCCCeEEEEec
Confidence 3478999999999999999999999999976 88888863 23333222 122577889999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEE
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVH 254 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~ 254 (298)
++++. +++.+ +.++|++|||||.... .+.|+..+++|+.| ++|+
T Consensus 84 v~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIn 157 (273)
T 4fgs_A 84 SANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVL 157 (273)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEE
Confidence 99875 44433 3479999999997532 14677889999999 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+||+.+.... | .+..|..+|..-..+-+
T Consensus 158 isS~~~~~~~----------~--~~~~Y~asKaav~~ltr 185 (273)
T 4fgs_A 158 TGSTAGSTGT----------P--AFSVYAASKAALRSFAR 185 (273)
T ss_dssp ECCGGGGSCC----------T--TCHHHHHHHHHHHHHHH
T ss_pred EeehhhccCC----------C--CchHHHHHHHHHHHHHH
Confidence 9998765321 1 23346666665554443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-13 Score=115.51 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=89.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||++++++|+++ +|++++|+.. ++...... + .. .++.+|++++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~------~~~~~~~~-----~--------~~-~~~~~D~~~~~ 55 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAG------ALAELARE-----V--------GA-RALPADLADEL 55 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHH------HHHHHHHH-----H--------TC-EECCCCTTSHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHH------HHHHHHHh-----c--------cC-cEEEeeCCCHH
Confidence 57999999999999999999877 4999998632 22211110 0 12 78889999865
Q ss_pred CCCCHHHHHHHhc---CccEEEEcCcccCc-------cccHHHHhhccccc--------------eEEEEeCCcccCCCC
Q psy14522 210 LGLSAADRAVLRR---NVTVVFHGAATVRF-------DENIKVAIAINIFG--------------SFVHVSTAYTHCPRQ 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~---~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~ 265 (298)
.+..+++ ++|+||||||.... ...+...+++|+.| +||++||..+...
T Consensus 56 ------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-- 127 (207)
T 2yut_A 56 ------EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-- 127 (207)
T ss_dssp ------HHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS--
T ss_pred ------HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC--
Confidence 6777766 89999999997532 23456677888877 8999999865421
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+...|..+|+..|.+++.+
T Consensus 128 ----------~~~~~~Y~~sK~a~~~~~~~~ 148 (207)
T 2yut_A 128 ----------VPGFAAYAAAKGALEAYLEAA 148 (207)
T ss_dssp ----------STTBHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCcchHHHHHHHHHHHHHHH
Confidence 123457888888888887654
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-13 Score=117.22 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=88.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+||||+|+||+++++.|+++|++ |++++|..... .-..+.+|+++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~~---------------------------~~~~~~~d~~d 70 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWN---TISIDFRENPN---------------------------ADHSFTIKDSG 70 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCTT---------------------------SSEEEECSCSS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCcccc---------------------------cccceEEEeCC
Confidence 4789999999999999999999999876 89999875421 12346678777
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEEe
Q psy14522 208 PGLGLSAADRAVLRR-------NVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
.. .+..+++ ++|++|||||.... ...+...+++|+.| +||++|
T Consensus 71 ~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (251)
T 3orf_A 71 EE------EIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG 144 (251)
T ss_dssp HH------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence 54 4444433 57999999996421 13455677888888 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
|+.+.. +...+..|..+|...+.+.+.++
T Consensus 145 S~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la 173 (251)
T 3orf_A 145 ASAALN------------RTSGMIAYGATKAATHHIIKDLA 173 (251)
T ss_dssp CGGGGS------------CCTTBHHHHHHHHHHHHHHHHHT
T ss_pred chhhcc------------CCCCCchhHHHHHHHHHHHHHHH
Confidence 986642 22245678888888888876543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-13 Score=118.90 Aligned_cols=131 Identities=13% Similarity=0.124 Sum_probs=92.0
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|+++|||| +|+||+++++.|++.|++ |+++.|+... .+++... ....++.++.+|
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~---V~~~~r~~~~-----~~~~~~~------------~~~~~~~~~~~D 64 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQ---LVLTGFDRLR-----LIQRITD------------RLPAKAPLLELD 64 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEECSCHH-----HHHHHHT------------TSSSCCCEEECC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecChHH-----HHHHHHH------------hcCCCceEEEcc
Confidence 46799999999 999999999999999876 8888886421 1111111 112467889999
Q ss_pred CCCCCCCCCHHHHHHHhc----------CccEEEEcCcccCc------------cccHHHHhhccccc------------
Q psy14522 205 VSLPGLGLSAADRAVLRR----------NVTVVFHGAATVRF------------DENIKVAIAINIFG------------ 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~----------~vd~Vih~A~~~~~------------~~~~~~~~~~Nv~g------------ 250 (298)
+++++ .+..+++ ++|++|||||.... ...+...+++|+.|
T Consensus 65 v~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (269)
T 2h7i_A 65 VQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM 138 (269)
T ss_dssp TTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 99865 4444443 79999999996531 13445667888887
Q ss_pred ----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||..+. +...|..|..+|...+.+.+.+
T Consensus 139 ~~~g~iv~iss~~~~-------------~~~~~~~Y~asKaa~~~l~~~l 175 (269)
T 2h7i_A 139 NPGGSIVGMDFDPSR-------------AMPAYNWMTVAKSALESVNRFV 175 (269)
T ss_dssp EEEEEEEEEECCCSS-------------CCTTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEcCcccc-------------ccCchHHHHHHHHHHHHHHHHH
Confidence 89999986431 1224667888888887776543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.7e-13 Score=115.93 Aligned_cols=132 Identities=12% Similarity=0.037 Sum_probs=88.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+++||||+|+||+++++.|+++|++ |+++.|+... +.+. . .+.++.+|+++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~---V~~~~r~~~~------~~~~---------------~--~~~~~~~D~~~~ 55 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYR---VAIASRNPEE------AAQS---------------L--GAVPLPTDLEKD 55 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH------HHHH---------------H--TCEEEECCTTTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHh---------------h--CcEEEecCCchH
Confidence 589999999999999999999999876 8888886431 1110 0 267889999982
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCcccCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAYTHCP 263 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~~~~~ 263 (298)
...-..+...+...++|++|||||.... ...+...+++|+.| +||++||..+...
T Consensus 56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 135 (239)
T 2ekp_A 56 DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTA 135 (239)
T ss_dssp CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccC
Confidence 2100011122234579999999997532 13456677888877 8999999866532
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. ......|..+|+..+.+.+.+
T Consensus 136 ~~----------~~~~~~Y~~sK~a~~~~~~~l 158 (239)
T 2ekp_A 136 GG----------PVPIPAYTTAKTALLGLTRAL 158 (239)
T ss_dssp CT----------TSCCHHHHHHHHHHHHHHHHH
T ss_pred CC----------CCCCccHHHHHHHHHHHHHHH
Confidence 10 012456777888777766543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=5.3e-13 Score=118.82 Aligned_cols=135 Identities=14% Similarity=0.153 Sum_probs=89.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|... ...+.+.+.+.. ....++.++.+|++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~--~~~~~~~~~l~~-----------~~~~~~~~~~~Dv~ 84 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYR---VVIHYHNSA--EAAVSLADELNK-----------ERSNTAVVCQADLT 84 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCE---EEEEESSCH--HHHHHHHHHHHH-----------HSTTCEEEEECCCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEeCCch--HHHHHHHHHHHh-----------hcCCceEEEEeecC
Confidence 56899999999999999999999999876 888888641 111222221110 11257889999999
Q ss_pred C----CCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-----------------ccHHHHhhccccc--------
Q psy14522 207 L----PGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-----------------ENIKVAIAINIFG-------- 250 (298)
Q Consensus 207 ~----~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-----------------~~~~~~~~~Nv~g-------- 250 (298)
+ +. .+..++ .++|++|||||..... ..+...+++|+.|
T Consensus 85 ~~~~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 158 (288)
T 2x9g_A 85 NSNVLPA------SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSF 158 (288)
T ss_dssp CSTTHHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CccCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 8 43 344433 3799999999975311 1234456677655
Q ss_pred ----------------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ----------------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ----------------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|+..+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~ 207 (288)
T 2x9g_A 159 AQRQKGTNPNCTSSNLSIVNLCDAMVDQP------------CMAFSLYNMGKHALVGLTQS 207 (288)
T ss_dssp HHHC--------CCCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCeEEEEEecccccCC------------CCCCchHHHHHHHHHHHHHH
Confidence 6899999865431 12345677777766666554
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-13 Score=119.49 Aligned_cols=130 Identities=8% Similarity=-0.054 Sum_probs=91.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++||||+|+||+++++.|+++|++ |+++.|+..... . . +.+|+++..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~~-------------------------~--~-~~~Dl~~~~ 50 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRDAEVI-------------------------A--D-LSTAEGRKQ 50 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSEE-------------------------C--C-TTSHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchhhc-------------------------c--c-cccCCCCHH
Confidence 58999999999999999999999876 888888753210 1 1 456776654
Q ss_pred CCCCHHHHHHHhc----CccEEEEcCcccCccccHHHHhhccccc------------------eEEEEeCCcccCCCC--
Q psy14522 210 LGLSAADRAVLRR----NVTVVFHGAATVRFDENIKVAIAINIFG------------------SFVHVSTAYTHCPRQ-- 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~----~vd~Vih~A~~~~~~~~~~~~~~~Nv~g------------------~~v~iSS~~~~~~~~-- 265 (298)
.+..+++ ++|++|||||.......++..+++|+.| +||++||..+.....
T Consensus 51 ------~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 124 (257)
T 1fjh_A 51 ------AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDK 124 (257)
T ss_dssp ------HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGG
T ss_pred ------HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhcccccc
Confidence 5666553 5699999999865356688888899887 899999986652110
Q ss_pred CccCc-----C---------CCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEV-----F---------YPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~-----~---------~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+..+. . ...+......|..+|...+.+.+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 169 (257)
T 1fjh_A 125 NPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKR 169 (257)
T ss_dssp CTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHH
Confidence 00000 0 0023335778999999988887654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.41 E-value=9e-13 Score=116.80 Aligned_cols=130 Identities=12% Similarity=0.074 Sum_probs=89.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |++++|+.. ++.+... ....++.++.+|++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~---Vi~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl~ 86 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLG---VVIADLAAE------KGKALAD------------ELGNRAEFVSTNVT 86 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChH------HHHHHHH------------HhCCceEEEEcCCC
Confidence 57899999999999999999999999876 888888632 2222111 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc------CccEEEEcCc-ccCc---------c---ccHHHHhhccccc-----------------
Q psy14522 207 LPGLGLSAADRAVLRR------NVTVVFHGAA-TVRF---------D---ENIKVAIAINIFG----------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~------~vd~Vih~A~-~~~~---------~---~~~~~~~~~Nv~g----------------- 250 (298)
+.. .+..+++ ++|++||||+ .... . ..+...+++|+.|
T Consensus 87 ~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 160 (281)
T 3ppi_A 87 SED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEP 160 (281)
T ss_dssp CHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCC
T ss_pred CHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc
Confidence 865 4554443 6899999944 3211 1 1246667777766
Q ss_pred -------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 -------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 -------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ...+..|..+|...+.+.+.
T Consensus 161 ~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~ 200 (281)
T 3ppi_A 161 RENGERGALVLTASIAGYEG------------QIGQTAYAAAKAGVIGLTIA 200 (281)
T ss_dssp CTTSCCEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cccCCCeEEEEEecccccCC------------CCCCcccHHHHHHHHHHHHH
Confidence 6999999866532 12345677777766666544
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=8.1e-13 Score=114.95 Aligned_cols=127 Identities=17% Similarity=0.097 Sum_probs=87.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... . ..+.++.+|++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~--~~~~~~~~D~~ 59 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGAR---LVACDIEEG------PLREAAE------------A--VGAHPVVMDVA 59 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------T--TTCEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------H--cCCEEEEecCC
Confidence 45789999999999999999999999876 888888632 2222111 1 13778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
++. .+..++ .++|++|||||.... ...++..+++|+.| +||+
T Consensus 60 ~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 133 (245)
T 1uls_A 60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL 133 (245)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 444443 368999999997532 13456677888877 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||.. .... | .+..|..+|...+.+.+.
T Consensus 134 isS~~-~~~~----------~--~~~~Y~asK~a~~~~~~~ 161 (245)
T 1uls_A 134 TASRV-YLGN----------L--GQANYAASMAGVVGLTRT 161 (245)
T ss_dssp ECCGG-GGCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred Eccch-hcCC----------C--CchhHHHHHHHHHHHHHH
Confidence 99976 2111 1 234566677766665543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.3e-13 Score=115.77 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=82.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+++||+++++.|++.|.+ |++..|.... +.. +.+. ....++..+.+|++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~---Vvi~~r~~~~-~~~----~~~~------------~~g~~~~~~~~Dv~ 66 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAE---VVCAARRAPD-ETL----DIIA------------KDGGNASALLIDFA 66 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCCH-HHH----HHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCE---EEEEeCCcHH-HHH----HHHH------------HhCCcEEEEEccCC
Confidence 57999999999999999999999999976 8888886431 111 1111 12357889999999
Q ss_pred CCCCCCCHHHHHHHh--cCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLR--RNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~iSS~ 258 (298)
++. ..+.++ .++|++|||||.... ...|+..+++|+.| +||++||+
T Consensus 67 d~~------~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~ 140 (247)
T 4hp8_A 67 DPL------AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL 140 (247)
T ss_dssp STT------TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred CHH------HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 875 233333 369999999997532 24677889999998 89999998
Q ss_pred cccC
Q psy14522 259 YTHC 262 (298)
Q Consensus 259 ~~~~ 262 (298)
.+..
T Consensus 141 ~~~~ 144 (247)
T 4hp8_A 141 LSFQ 144 (247)
T ss_dssp GGTS
T ss_pred hhCC
Confidence 7653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=8.7e-13 Score=115.09 Aligned_cols=127 Identities=17% Similarity=0.108 Sum_probs=86.5
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+.+|+++||||+|+||+++++.|+++|++ |+++.|+. +.+.+ . .++.++ +|
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~----------------~-~~~~~~-~D 67 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAE---VTICARNE------ELLKR----------------S-GHRYVV-CD 67 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHH----------------T-CSEEEE-CC
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCH------HHHHh----------------h-CCeEEE-ee
Confidence 3467899999999999999999999999876 88888863 11110 0 256667 99
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCc
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAY 259 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~ 259 (298)
+ ... ...+...+.++|++|||||..... ..+...+++|+.| +||++||..
T Consensus 68 ~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~ 142 (249)
T 1o5i_A 68 L-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142 (249)
T ss_dssp T-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred H-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchH
Confidence 8 222 223333344899999999965321 3455667888866 899999986
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+... ...+..|..+|...+.+.+.
T Consensus 143 ~~~~------------~~~~~~Y~~sK~a~~~~~~~ 166 (249)
T 1o5i_A 143 VISP------------IENLYTSNSARMALTGFLKT 166 (249)
T ss_dssp GTSC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred hcCC------------CCCCchHHHHHHHHHHHHHH
Confidence 6532 11235677777777766554
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=114.35 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=80.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+||||||+++||+++++.|+++|.+ |++.+|+.. ++.+.. ....++.++.+|++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~------~~~~~~-------------~~~~~~~~~~~Dv~~~ 59 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK---VCFIDIDEK------RSADFA-------------KERPNLFYFHGDVADP 59 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHH-------------TTCTTEEEEECCTTSH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHH-------------HhcCCEEEEEecCCCH
Confidence 589999999999999999999999976 888888631 222211 1125788999999987
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEEeC
Q psy14522 209 GLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHVST 257 (298)
Q Consensus 209 ~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~iSS 257 (298)
. +++.+ +.++|++|||||.... .+.|+..+++|+.| ++|++||
T Consensus 60 ~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS 133 (247)
T 3ged_A 60 L------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEee
Confidence 5 34433 3479999999997532 14577788999988 9999999
Q ss_pred Cccc
Q psy14522 258 AYTH 261 (298)
Q Consensus 258 ~~~~ 261 (298)
+.+.
T Consensus 134 ~~~~ 137 (247)
T 3ged_A 134 TRAF 137 (247)
T ss_dssp GGGT
T ss_pred cccc
Confidence 8765
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.2e-13 Score=117.07 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=89.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++.|+.. ..+.+.+.+.. ...++.++.+|++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~~~~~------------~~~~~~~~~~Dv~ 64 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGAT---VYITGRHLD---TLRVVAQEAQS------------LGGQCVPVVCDSS 64 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH------------HSSEEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHHH------------cCCceEEEECCCC
Confidence 46799999999999999999999999876 888888632 11122111110 1246888999999
Q ss_pred CCCCCCCHHHHHHH--------hcCccEEEEcCc--cc--------Cc----cccHHHHhhccccc--------------
Q psy14522 207 LPGLGLSAADRAVL--------RRNVTVVFHGAA--TV--------RF----DENIKVAIAINIFG-------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l--------~~~vd~Vih~A~--~~--------~~----~~~~~~~~~~Nv~g-------------- 250 (298)
++. .+..+ ..++|++||||| .. .+ ...+...+++|+.|
T Consensus 65 ~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 138 (260)
T 2qq5_A 65 QES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP 138 (260)
T ss_dssp SHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG
T ss_pred CHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh
Confidence 865 33332 346899999994 21 11 13456677778766
Q ss_pred ----eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 ----SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 ----~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... .+ ...|..+|+..+.+.+.+
T Consensus 139 ~~~g~iv~isS~~~~~~----------~~---~~~Y~asK~a~~~~~~~l 175 (260)
T 2qq5_A 139 AGQGLIVVISSPGSLQY----------MF---NVPYGVGKAACDKLAADC 175 (260)
T ss_dssp GTCCEEEEECCGGGTSC----------CS---SHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcChhhcCC----------CC---CCchHHHHHHHHHHHHHH
Confidence 8999999865421 11 246778888877776543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=115.85 Aligned_cols=115 Identities=15% Similarity=0.264 Sum_probs=79.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+|+||||+|+||++++++|+++|++ |+++.|+... .+.+.+.+.. . .......++.++.+|+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~~----~---~~~~~~~~~~~~~~D~ 81 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSN---VVIASRKLER---LKSAADELQA----N---LPPTKQARVIPIQCNI 81 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH----T---SCTTCCCCEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh----h---ccccCCccEEEEecCC
Confidence 356899999999999999999999999876 8888886321 1111111110 0 0001235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+++. .+..+++ ++|+||||||.... ...+...+++|+.| +||
T Consensus 82 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 155 (303)
T 1yxm_A 82 RNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIV 155 (303)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9865 4554443 59999999996421 13445667888877 699
Q ss_pred EEeCCc
Q psy14522 254 HVSTAY 259 (298)
Q Consensus 254 ~iSS~~ 259 (298)
++||..
T Consensus 156 ~isS~~ 161 (303)
T 1yxm_A 156 NIIVPT 161 (303)
T ss_dssp EECCCC
T ss_pred EEEeec
Confidence 999975
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.7e-13 Score=112.26 Aligned_cols=133 Identities=22% Similarity=0.183 Sum_probs=88.5
Q ss_pred ceeeecCCCCCCchhHHHHHH-HhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLL-RACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll-~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+|+||||+|+||+++++.|+ +.|++ |+++.|+... ++.+.. ....++.++.+|++++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~---V~~~~r~~~~-----~~~~~~-------------~~~~~~~~~~~D~~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMH---ITLYGRQLKT-----RIPPEI-------------IDHERVTVIEGSFQNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCE---EEEEESSHHH-----HSCHHH-------------HTSTTEEEEECCTTCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCce---EEEEecCccc-----cchhhc-------------cCCCceEEEECCCCCH
Confidence 569999999999999999999 78766 8999986320 111100 0125789999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHH----hhccccceEEEEeCCcccCCCC-CccCcCCCCCCChHHHHH
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA----IAINIFGSFVHVSTAYTHCPRQ-EIDEVFYPPPYDYKDFME 283 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~----~~~Nv~g~~v~iSS~~~~~~~~-~~~E~~~~~p~~~y~~yk 283 (298)
+ .+..+++++|+||||||..++. ...+ .+.++ ++||++||..+..... ...+.. ..... ..|.
T Consensus 65 ~------~~~~~~~~~d~vv~~ag~~n~~--~~~~~~~~~~~~~-~~iv~iSs~~~~~~~~~~~~~~~-~~~~~--~~y~ 132 (221)
T 3r6d_A 65 G------XLEQAVTNAEVVFVGAMESGSD--MASIVKALSRXNI-RRVIGVSMAGLSGEFPVALEKWT-FDNLP--ISYV 132 (221)
T ss_dssp H------HHHHHHTTCSEEEESCCCCHHH--HHHHHHHHHHTTC-CEEEEEEETTTTSCSCHHHHHHH-HHTSC--HHHH
T ss_pred H------HHHHHHcCCCEEEEcCCCCChh--HHHHHHHHHhcCC-CeEEEEeeceecCCCCccccccc-ccccc--cHHH
Confidence 6 7888899999999999975433 2211 11121 2999999986654221 000000 00000 1688
Q ss_pred HHHHHHHHHHhh
Q psy14522 284 LVMSRSDDNLEE 295 (298)
Q Consensus 284 ~sK~~aE~~l~~ 295 (298)
.+|+..|++++.
T Consensus 133 ~~K~~~e~~~~~ 144 (221)
T 3r6d_A 133 QGERQARNVLRE 144 (221)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 899999998864
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=7.3e-13 Score=116.61 Aligned_cols=129 Identities=17% Similarity=0.128 Sum_probs=91.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|+.. ++++... +...++.++.+|++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREER------LLAEAVA------------ALEAEAIAVVADVS 62 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TCCSSEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhcCceEEEEcCCC
Confidence 46789999999999999999999999876 888888632 2222211 11147889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++ .+..++ .++|++|||||..... ..++..+++|+.| +||++|
T Consensus 63 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 136 (263)
T 2a4k_A 63 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 136 (263)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 865 444443 3689999999975321 3345567777766 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|+.+. . ......|..+|...+.+.+.
T Consensus 137 S~~~~-~------------~~~~~~Y~asK~a~~~~~~~ 162 (263)
T 2a4k_A 137 SVAGL-G------------AFGLAHYAAGKLGVVGLART 162 (263)
T ss_dssp CCTTC-C------------HHHHHHHHHCSSHHHHHHHH
T ss_pred cchhc-C------------CCCcHHHHHHHHHHHHHHHH
Confidence 98654 1 11356788888877766554
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-13 Score=131.12 Aligned_cols=122 Identities=20% Similarity=0.165 Sum_probs=84.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|||||||||||++|++.|++.|++ |++++|..... ..+.+|+.+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~---V~~l~R~~~~~-----------------------------~~v~~d~~~~ 194 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE---VIQLVRKEPKP-----------------------------GKRFWDPLNP 194 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSSCCT-----------------------------TCEECCTTSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCCc-----------------------------cceeecccch
Confidence 689999999999999999999999876 99999975421 1255677643
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc----cccHHHHhhccccc---------------eEEEEeCCcccC---CCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF----DENIKVAIAINIFG---------------SFVHVSTAYTHC---PRQE 266 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~---~~~~ 266 (298)
+...++++|+|||+|+.... ......++++|+.| +|||+||+++++ ...+
T Consensus 195 --------~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~ 266 (516)
T 3oh8_A 195 --------ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI 266 (516)
T ss_dssp --------CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE
T ss_pred --------hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc
Confidence 23345789999999997532 23445566777766 899999976554 2346
Q ss_pred ccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 267 IDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 267 ~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++|+.+. |.+.| ..+|...|+++.
T Consensus 267 ~~E~~~~-~~~~y---~~~~~~~E~~~~ 290 (516)
T 3oh8_A 267 LTEESES-GDDFL---AEVCRDWEHATA 290 (516)
T ss_dssp ECTTSCC-CSSHH---HHHHHHHHHTTH
T ss_pred cCCCCCC-CcChH---HHHHHHHHHHHH
Confidence 7787765 44544 445555565543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=114.22 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=88.9
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|+++||||+| +||.++++.|+++|.+ |++..|+.. ..+.+.+.+.. ....++.++.+|
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~---Vvi~~r~~~---~~~~~~~~~~~-----------~~~~~~~~~~~D 66 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAK---LVFTYRKER---SRKELEKLLEQ-----------LNQPEAHLYQID 66 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHGG-----------GTCSSCEEEECC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHh-----------cCCCcEEEEEcc
Confidence 5799999999887 8999999999999976 888888643 22333333221 112478899999
Q ss_pred CCCCCC-CCCHHHHHHHhcCccEEEEcCcccCcc-----------ccHHHHhhccccc----------------eEEEEe
Q psy14522 205 VSLPGL-GLSAADRAVLRRNVTVVFHGAATVRFD-----------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 205 l~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-----------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++++- .-..+...+.+.++|++|||||..... ..|...+++|+.+ ++|++|
T Consensus 67 v~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 67 VQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 998650 000112223344799999999964311 2233345667665 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
|+.+... ...+..|..+|..-+.+.+
T Consensus 147 S~~~~~~------------~~~~~~Y~asKaal~~ltr 172 (256)
T 4fs3_A 147 YLGGEFA------------VQNYNVMGVAKASLEANVK 172 (256)
T ss_dssp CGGGTSC------------CTTTHHHHHHHHHHHHHHH
T ss_pred ccccccC------------cccchhhHHHHHHHHHHHH
Confidence 9876432 1234556666665555443
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.2e-13 Score=118.59 Aligned_cols=117 Identities=21% Similarity=0.136 Sum_probs=77.0
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|+++|++ |++++|++.. .++. .|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~---V~~l~R~~~~---------------------------~~~~---~~----- 42 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHE---VTLVSRKPGP---------------------------GRIT---WD----- 42 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------TEEE---HH-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCc---------------------------Ceee---cc-----
Confidence 68999999999999999999999987 9999997532 1111 11
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccc--Ccc-----ccHHHHhhccccc----------------eEEEEeCCccc--CCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATV--RFD-----ENIKVAIAINIFG----------------SFVHVSTAYTH--CPR 264 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~--~~~-----~~~~~~~~~Nv~g----------------~~v~iSS~~~~--~~~ 264 (298)
......++++|.|||+|+.. ... .....++..|+.+ +||++||++++ ...
T Consensus 43 -----~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~ 117 (298)
T 4b4o_A 43 -----ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT 117 (298)
T ss_dssp -----HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS
T ss_pred -----hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC
Confidence 01223456899999999853 111 1123355556555 58888987544 445
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHH
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSD 290 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE 290 (298)
.++.|+.+..|.+.|+ +...+|.++
T Consensus 118 ~~~~E~~p~~~~~~~~-~~~~~~e~~ 142 (298)
T 4b4o_A 118 AEYDEDSPGGDFDFFS-NLVTKWEAA 142 (298)
T ss_dssp CCBCTTCCCSCSSHHH-HHHHHHHHH
T ss_pred CcccccCCccccchhH-HHHHHHHHH
Confidence 6788888766666553 444445444
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.8e-13 Score=115.53 Aligned_cols=105 Identities=12% Similarity=0.135 Sum_probs=75.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+..|+||||||+|+||+++++.|++.| ++ |+++.|+..... .....++.++.+|+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~---V~~~~R~~~~~~---------------------~~~~~~~~~~~~Dl 76 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIK---QTLFARQPAKIH---------------------KPYPTNSQIIMGDV 76 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEE---EEEEESSGGGSC---------------------SSCCTTEEEEECCT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCce---EEEEEcChhhhc---------------------ccccCCcEEEEecC
Confidence 346789999999999999999999998 55 999999753211 01125789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHH----hhccccceEEEEeCCcccC
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA----IAINIFGSFVHVSTAYTHC 262 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~----~~~Nv~g~~v~iSS~~~~~ 262 (298)
+++. .+..+++++|+|||||+..........+ .+.++ ++||++||+.++.
T Consensus 77 ~d~~------~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~-~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 77 LNHA------ALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDV-KRLIFVLSLGIYD 130 (236)
T ss_dssp TCHH------HHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTC-CEEEEECCCCC--
T ss_pred CCHH------HHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCC-CEEEEEecceecC
Confidence 9876 8899999999999999865432211111 11121 2999999986543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=115.89 Aligned_cols=119 Identities=17% Similarity=0.166 Sum_probs=81.2
Q ss_pred eeeecCCCCCCchhHHHHHHHh--CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRA--CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|+|||||||||+++++.|+++ |++ |++++|+..... .+. ..++.++.+|++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~---~~~------------------~~~~~~~~~D~~d~ 56 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ---IVAIVRNPAKAQ---ALA------------------AQGITVRQADYGDE 56 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTCH---HHH------------------HTTCEEEECCTTCH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce---EEEEEcChHhhh---hhh------------------cCCCeEEEcCCCCH
Confidence 4899999999999999999998 766 999999754211 111 14678999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc---c--ccH-HHHhhccccceEEEEeCCcccCCCCCccCcCCCCCCChHHHH
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF---D--ENI-KVAIAINIFGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFM 282 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~--~~~-~~~~~~Nv~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~y 282 (298)
. .+..+++++|+|||+|+.... . ... +...+.++ ++|||+||.++.. .| . .|
T Consensus 57 ~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~Ss~~~~~-----------~~-~---~y 114 (286)
T 2zcu_A 57 A------ALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGV-KFIAYTSLLHADT-----------SP-L---GL 114 (286)
T ss_dssp H------HHHHHTTTCSEEEECC--------CHHHHHHHHHHHHTC-CEEEEEEETTTTT-----------CC-S---TT
T ss_pred H------HHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCC-CEEEEECCCCCCC-----------Cc-c---hh
Confidence 5 788899999999999985310 0 000 00111121 1999999986541 11 1 36
Q ss_pred HHHHHHHHHHHhh
Q psy14522 283 ELVMSRSDDNLEE 295 (298)
Q Consensus 283 k~sK~~aE~~l~~ 295 (298)
..+|+.+|++++.
T Consensus 115 ~~sK~~~e~~~~~ 127 (286)
T 2zcu_A 115 ADEHIETEKMLAD 127 (286)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7788999998864
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-12 Score=113.94 Aligned_cols=107 Identities=20% Similarity=0.231 Sum_probs=77.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|..... ..+..++.+|++
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~~~-------------------------~~~~~~~~~Dv~ 60 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQ---VLTTARARPEG-------------------------LPEELFVEADLT 60 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCE---EEEEESSCCTT-------------------------SCTTTEEECCTT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCE---EEEEECCchhC-------------------------CCcEEEEEcCCC
Confidence 57999999999999999999999999976 88888864321 123346889999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCc---------cccHHHHhhccccc------------------eEEEEeCC
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRF---------DENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~---------~~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
+++- .-..+...+.+.++|++|||||.... .+.|...+++|+.| ++|++||+
T Consensus 61 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~ 140 (261)
T 4h15_A 61 TKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSI 140 (261)
T ss_dssp SHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEeh
Confidence 8650 00011222223479999999996421 13566788999988 89999998
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
.+.
T Consensus 141 ~~~ 143 (261)
T 4h15_A 141 QRV 143 (261)
T ss_dssp GGT
T ss_pred hhc
Confidence 664
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=7.5e-12 Score=111.97 Aligned_cols=134 Identities=17% Similarity=0.226 Sum_probs=87.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc--chhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK--TVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~--~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.|+|+|||||||+|+++++.|++.|++ |++++|+.... ...+.+.. +. ..+++++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~D~~ 65 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLLY-FK--------------QLGAKLIEASLD 65 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHHHHHHHHH-HH--------------TTTCEEECCCSS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchhHHHHHHH-HH--------------hCCeEEEeCCCC
Confidence 478999999999999999999999877 99999985432 11111111 11 157899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc----ccH---HHHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCCh
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD----ENI---KVAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDY 278 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~----~~~---~~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~ 278 (298)
++. .+..+++++|+|||+|+..... ... +...+.+ +. +||+ |.++...... ..+..|.
T Consensus 66 d~~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~-~~v~--S~~g~~~~~~---~~~~~p~-- 131 (313)
T 1qyd_A 66 DHQ------RLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK-RFLP--SEFGMDPDIM---EHALQPG-- 131 (313)
T ss_dssp CHH------HHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS-EEEC--SCCSSCTTSC---CCCCSST--
T ss_pred CHH------HHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc-eEEe--cCCcCCcccc---ccCCCCC--
Confidence 875 7888999999999999976321 111 1112222 32 7774 5555322111 1111222
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy14522 279 KDFMELVMSRSDDNLEE 295 (298)
Q Consensus 279 y~~yk~sK~~aE~~l~~ 295 (298)
...| .+|+.+|+++++
T Consensus 132 ~~~y-~sK~~~e~~~~~ 147 (313)
T 1qyd_A 132 SITF-IDKRKVRRAIEA 147 (313)
T ss_dssp THHH-HHHHHHHHHHHH
T ss_pred cchH-HHHHHHHHHHHh
Confidence 3457 899999999865
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.7e-12 Score=112.97 Aligned_cols=141 Identities=15% Similarity=0.100 Sum_probs=90.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec-CCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV-RPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|++|||||+|+||+++++.|+++|++ |+++. |+.. ..+.+.+.+.. ....++.++.+|+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~r~~~---~~~~~~~~l~~-----------~~~~~~~~~~~Dl 69 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAA---EANALSATLNA-----------RRPNSAITVQADL 69 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHHH-----------HSTTCEEEEECCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEcCCCHH---HHHHHHHHHhh-----------hcCCeeEEEEeec
Confidence 46899999999999999999999999876 88888 7532 11222221110 1125788999999
Q ss_pred CCCCCC-----------C---CH----HHHHHHhcCccEEEEcCcccCc---------------------cccHHHHhhc
Q psy14522 206 SLPGLG-----------L---SA----ADRAVLRRNVTVVFHGAATVRF---------------------DENIKVAIAI 246 (298)
Q Consensus 206 ~~~~~g-----------l---~~----~~~~~l~~~vd~Vih~A~~~~~---------------------~~~~~~~~~~ 246 (298)
+++..- . +. +.+.....++|++|||||.... ...+...+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T 1e7w_A 70 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS 149 (291)
T ss_dssp SSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHH
T ss_pred CCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence 986500 0 01 1122223479999999997531 2234456677
Q ss_pred cccc------------------------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 247 NIFG------------------------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 247 Nv~g------------------------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.| +||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 150 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~l 211 (291)
T 1e7w_A 150 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGLTRSA 211 (291)
T ss_dssp HTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC------------CCCCchhHHHHHHHHHHHHHH
Confidence 7755 5999999865432 123456777777777766543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-13 Score=121.79 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=77.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCC-CcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACP-HLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~-~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+|||||||||||++++++|+++|+ + |++++|. .+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~---v~~~d~~----------------------------------------~d- 36 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHH---IFEVHRQ----------------------------------------TK- 36 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCE---EEECCTT----------------------------------------CC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCE---EEEECCC----------------------------------------CC-
Confidence 5899999999999999999999986 4 7777662 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCcccCCCCCccCcCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAYTHCPRQEIDEVFYP 273 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~~~~~~~E~~~~ 273 (298)
.+.+..+++++|+|||+||..... ....++++|+.+ +|||+||+++..
T Consensus 37 -----~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------- 99 (369)
T 3st7_A 37 -----EEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------- 99 (369)
T ss_dssp -----HHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-----------
T ss_pred -----HHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-----------
Confidence 236777777899999999976532 334455666655 799999987654
Q ss_pred CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 274 PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 274 ~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+.|..+|+.+|++++..
T Consensus 100 -----~~~Y~~sK~~~E~~~~~~ 117 (369)
T 3st7_A 100 -----DNPYGESKLQGEQLLREY 117 (369)
T ss_dssp -----CSHHHHHHHHHHHHHHHH
T ss_pred -----CCCchHHHHHHHHHHHHH
Confidence 235778899999998764
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=124.20 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=96.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+..+++||||||+|+||.++++.|++.|.. +|+++.|+.......+.+.+.+. ....++.++.+|+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~------------~~g~~v~~~~~Dv 321 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE--RLVLTSRRGPEAPGAAELAEELR------------GHGCEVVHAACDV 321 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHH------------TTTCEEEEEECCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc--EEEEEecCCcccHHHHHHHHHHH------------hcCCEEEEEEeCC
Confidence 446799999999999999999999999853 48888887532222223222221 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhcC--ccEEEEcCcccCcc-------ccHHHHhhccccc---------------eEEEEeCCccc
Q psy14522 206 SLPGLGLSAADRAVLRRN--VTVVFHGAATVRFD-------ENIKVAIAINIFG---------------SFVHVSTAYTH 261 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~--vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g---------------~~v~iSS~~~~ 261 (298)
++.. .+..+++. +|+||||||..... ..+...+.+|+.| +||++||+.+.
T Consensus 322 td~~------~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~ 395 (511)
T 2z5l_A 322 AERD------ALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGT 395 (511)
T ss_dssp SCHH------HHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGT
T ss_pred CCHH------HHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhc
Confidence 9876 67777754 99999999976432 2345566777766 79999998553
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
... ...+.|..+|...|.+.+.
T Consensus 396 ~g~------------~g~~~YaaaKa~ld~la~~ 417 (511)
T 2z5l_A 396 WGN------------AGQGAYAAANAALDALAER 417 (511)
T ss_dssp TCC------------TTBHHHHHHHHHHHHHHHH
T ss_pred CCC------------CCCHHHHHHHHHHHHHHHH
Confidence 211 1245788888888887654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=114.70 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=91.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHH---hCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLR---ACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~---~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
+.+|+++||||+|+||+++++.|++ .|++ |+++.|+.. ..+.+.+.+.. . ....++.++.+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~---V~~~~r~~~---~~~~~~~~l~~--------~--~~~~~~~~~~~ 67 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSV---MLVSARSES---MLRQLKEELGA--------Q--QPDLKVVLAAA 67 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---EEEEESCHH---HHHHHHHHHHH--------H--CTTSEEEEEEC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe---EEEEeCCHH---HHHHHHHHHHh--------h--CCCCeEEEEec
Confidence 4689999999999999999999999 7765 888888632 11222111110 0 00246889999
Q ss_pred CCCCCCCCCCHHHHHHHh----c-----Ccc--EEEEcCcccCc----------cccHHHHhhccccc------------
Q psy14522 204 DVSLPGLGLSAADRAVLR----R-----NVT--VVFHGAATVRF----------DENIKVAIAINIFG------------ 250 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l~----~-----~vd--~Vih~A~~~~~----------~~~~~~~~~~Nv~g------------ 250 (298)
|++++. .+..++ + ++| ++|||||.... ...+...+++|+.|
T Consensus 68 Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 141 (259)
T 1oaa_A 68 DLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAF 141 (259)
T ss_dssp CTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTS
T ss_pred CCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999865 344332 2 468 99999997421 13455677888877
Q ss_pred --------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||++||+.+... ......|..+|...+.+.+.+
T Consensus 142 ~~~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l 183 (259)
T 1oaa_A 142 QDSPGLSKTVVNISSLCALQP------------YKGWGLYCAGKAARDMLYQVL 183 (259)
T ss_dssp CCCTTCEEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCceEEEEcCchhcCC------------CCCccHHHHHHHHHHHHHHHH
Confidence 3999999866421 123456778888777776543
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.8e-12 Score=115.62 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=90.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec-CCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV-RPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+.+|++|||||+|+||+++++.|++.|++ |+++. |+.. ..+.+.+.+.. ....++.++.+|+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~---Vv~~~~r~~~---~~~~~~~~l~~-----------~~~~~~~~~~~Dl 106 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAA---EANALSATLNA-----------RRPNSAITVQADL 106 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHHH-----------HSTTCEEEEECCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHHHh-----------hcCCeEEEEEeeC
Confidence 56899999999999999999999999876 88888 7532 11222221110 1125788999999
Q ss_pred CCCCC-----------CCCHHHHHHH-------hcCccEEEEcCcccCc---------------------cccHHHHhhc
Q psy14522 206 SLPGL-----------GLSAADRAVL-------RRNVTVVFHGAATVRF---------------------DENIKVAIAI 246 (298)
Q Consensus 206 ~~~~~-----------gl~~~~~~~l-------~~~vd~Vih~A~~~~~---------------------~~~~~~~~~~ 246 (298)
+++.- .-....+..+ +.++|++|||||.... ...+...+++
T Consensus 107 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v 186 (328)
T 2qhx_A 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS 186 (328)
T ss_dssp SSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHH
T ss_pred CCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence 98650 0000022222 3479999999997531 2234455677
Q ss_pred cccc------------------------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 247 NIFG------------------------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 247 Nv~g------------------------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+.| +||++||+.+... ...+..|..+|...+.+.+.+
T Consensus 187 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~l 248 (328)
T 2qhx_A 187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGLTRSA 248 (328)
T ss_dssp HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC------------CCCcHHHHHHHHHHHHHHHHH
Confidence 7665 4999999865421 123456777888777776543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.33 E-value=8.7e-13 Score=113.00 Aligned_cols=114 Identities=15% Similarity=0.065 Sum_probs=82.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|+||+++++.|+++|++ |+++.|.. . +|++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~-----------------------------~------~D~~ 45 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTI---VHVASRQT-----------------------------G------LDIS 45 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEE---EEEESGGG-----------------------------T------CCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEecCCc-----------------------------c------cCCC
Confidence 45789999999999999999999999865 88887742 1 6777
Q ss_pred CCCCCCCHHHHHHHh---cCccEEEEcCcccCc--------cccHHHHhhccccc----------------eEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLR---RNVTVVFHGAATVRF--------DENIKVAIAINIFG----------------SFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~---~~vd~Vih~A~~~~~--------~~~~~~~~~~Nv~g----------------~~v~iSS~~ 259 (298)
+++ .++.++ .++|++|||||.... ...+...+++|+.| ++|++||+.
T Consensus 46 ~~~------~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 46 DEK------SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp CHH------HHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 764 455444 479999999997521 13455677888887 899999986
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+... ...+..|..+|...+.+.+.+
T Consensus 120 ~~~~------------~~~~~~Y~asK~a~~~~~~~l 144 (223)
T 3uce_A 120 SRKV------------VANTYVKAAINAAIEATTKVL 144 (223)
T ss_dssp GTSC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred hccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 5432 123456777778777766543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-13 Score=118.84 Aligned_cols=134 Identities=20% Similarity=0.222 Sum_probs=78.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||+++++.|++ |.. |+++.|... ++.+... ..++.++.+|++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~---v~~~~r~~~------~~~~~~~--------------~~~~~~~~~D~~ 58 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHI---VYALGRNPE------HLAALAE--------------IEGVEPIESDIV 58 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSE---EEEEESCHH------HHHHHHT--------------STTEEEEECCHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCe---EEEEeCCHH------HHHHHHh--------------hcCCcceecccc
Confidence 4578999999999999999999987 654 888888632 1211110 146888999987
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEeCCcccC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVSTAYTHC 262 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iSS~~~~~ 262 (298)
+...............++|++|||||..... ..+...+++|+.| ++|++||..+..
T Consensus 59 ~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 138 (245)
T 3e9n_A 59 KEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG 138 (245)
T ss_dssp HHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------
T ss_pred hHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc
Confidence 6421000001111234799999999975321 3455677888877 799999986543
Q ss_pred CCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 263 PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 263 ~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. ......|..+|...+.+.+.+
T Consensus 139 ~------------~~~~~~Y~asK~a~~~~~~~l 160 (245)
T 3e9n_A 139 P------------HPGNTIYAASKHALRGLADAF 160 (245)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHH
T ss_pred C------------CCCchHHHHHHHHHHHHHHHH
Confidence 2 123456788888877776543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-11 Score=109.14 Aligned_cols=136 Identities=20% Similarity=0.339 Sum_probs=87.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|+||||||++|+++++.|++.|++ |++++|+.......++.... . .+ ...+++++.+|+.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~-~-----~l------~~~~v~~v~~D~~d~ 68 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLL-E-----SF------KASGANIVHGSIDDH 68 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHHHH-H-----HH------HTTTCEEECCCTTCH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC---EEEEECCcccccCHHHHHHH-H-----HH------HhCCCEEEEeccCCH
Confidence 478999999999999999999999877 89999985432001111110 0 00 015789999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccHH---HHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCChHHHHHH
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENIK---VAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMEL 284 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~---~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~ 284 (298)
. .+..+++++|+|||+|+......... ...+.+ +. +||+ |.++... .|..+..| ....| .
T Consensus 69 ~------~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v~--S~~g~~~----~~~~~~~p--~~~~y-~ 132 (308)
T 1qyc_A 69 A------SLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK-RFFP--SEFGNDV----DNVHAVEP--AKSVF-E 132 (308)
T ss_dssp H------HHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS-EEEC--SCCSSCT----TSCCCCTT--HHHHH-H
T ss_pred H------HHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCc-eEee--cccccCc----cccccCCc--chhHH-H
Confidence 5 78888899999999999754332221 122222 32 6763 4454321 22221122 24567 8
Q ss_pred HHHHHHHHHhh
Q psy14522 285 VMSRSDDNLEE 295 (298)
Q Consensus 285 sK~~aE~~l~~ 295 (298)
+|+.+|++++.
T Consensus 133 sK~~~e~~~~~ 143 (308)
T 1qyc_A 133 VKAKVRRAIEA 143 (308)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-12 Score=114.55 Aligned_cols=128 Identities=16% Similarity=0.071 Sum_probs=85.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.|+|+||||||+||+++++.|+++| ++ |++++|+...... +.+ . ..+++++.+|+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~R~~~~~~~-~~l----~--------------~~~~~~~~~D~~d 62 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFK---VRVVTRNPRKKAA-KEL----R--------------LQGAEVVQGDQDD 62 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSE---EEEEESCTTSHHH-HHH----H--------------HTTCEEEECCTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCce---EEEEEcCCCCHHH-HHH----H--------------HCCCEEEEecCCC
Confidence 5789999999999999999999997 55 9999997643211 111 1 1468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCcccc---HH---HH----hhccccceEEEEeCCcccCCCCCccCcCCCCCCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDEN---IK---VA----IAINIFGSFVHVSTAYTHCPRQEIDEVFYPPPYD 277 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~---~~---~~----~~~Nv~g~~v~iSS~~~~~~~~~~~E~~~~~p~~ 277 (298)
+. .+..+++++|+|||+|+....... .. .+ .+.++ ++|||+||...... .+. .+..
T Consensus 63 ~~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv-~~iv~~S~~~~~~~----~~~---~~~~ 128 (299)
T 2wm3_A 63 QV------IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGL-HYVVYSGLENIKKL----TAG---RLAA 128 (299)
T ss_dssp HH------HHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTC-SEEEECCCCCHHHH----TTT---SCCC
T ss_pred HH------HHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCC-CEEEEEcCcccccc----CCC---cccC
Confidence 76 788899999999999985321100 00 01 11111 18999777543221 111 1223
Q ss_pred hHHHHHHHHHHHHHHHhh
Q psy14522 278 YKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 278 ~y~~yk~sK~~aE~~l~~ 295 (298)
.|..+|+.+|++++.
T Consensus 129 ---~y~~sK~~~e~~~~~ 143 (299)
T 2wm3_A 129 ---AHFDGKGEVEEYFRD 143 (299)
T ss_dssp ---HHHHHHHHHHHHHHH
T ss_pred ---chhhHHHHHHHHHHH
Confidence 356789999999865
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-11 Score=109.33 Aligned_cols=136 Identities=14% Similarity=0.221 Sum_probs=87.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchh-HHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVS-ERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~-~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+++|+||||||+||+++++.|++.|++ |++++|+....... ++.... .. +. ..+++++.+|+.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~-~~-----l~------~~~v~~v~~D~~d 66 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP---TYALVRKTITAANPETKEELI-DN-----YQ------SLGVILLEGDIND 66 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC---EEEEECCSCCSSCHHHHHHHH-HH-----HH------HTTCEEEECCTTC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc---EEEEECCCcccCChHHHHHHH-HH-----HH------hCCCEEEEeCCCC
Confidence 478999999999999999999999877 89999975211101 111111 00 00 1478899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccH---HHHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCChHHHHH
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENI---KVAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFME 283 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~---~~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk 283 (298)
++ .+..+++++|+|||+|+........ +...+.+ +. +|| .|.++... .|.....| ....|
T Consensus 67 ~~------~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v--~S~~g~~~----~~~~~~~p--~~~~y- 130 (307)
T 2gas_A 67 HE------TLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVK-KFF--PSEFGLDV----DRHDAVEP--VRQVF- 130 (307)
T ss_dssp HH------HHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCS-EEE--CSCCSSCT----TSCCCCTT--HHHHH-
T ss_pred HH------HHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCce-EEe--ecccccCc----ccccCCCc--chhHH-
Confidence 75 7888999999999999975432211 1122222 32 666 45554321 22221112 24578
Q ss_pred HHHHHHHHHHhh
Q psy14522 284 LVMSRSDDNLEE 295 (298)
Q Consensus 284 ~sK~~aE~~l~~ 295 (298)
.+|+..|++++.
T Consensus 131 ~sK~~~e~~~~~ 142 (307)
T 2gas_A 131 EEKASIRRVIEA 142 (307)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999998865
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.6e-12 Score=121.79 Aligned_cols=116 Identities=27% Similarity=0.331 Sum_probs=83.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+..++++|||||+|+||.++++.|+++|.. +|+++.|+.......+++.+.+.. ...++.++.+|+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~------------~g~~v~~~~~Dv 288 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELEA------------LGARTTVAACDV 288 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHHH------------TTCEEEEEECCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC--EEEEEcCCCCCcHHHHHHHHHHHh------------cCCEEEEEEeCC
Confidence 456799999999999999999999999853 588888875432222333222221 125788999999
Q ss_pred CCCCCCCCHHHHHHHhcC------ccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCC
Q psy14522 206 SLPGLGLSAADRAVLRRN------VTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~------vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
+++. .+..+++. +|+||||||..... ..+...+++|+.| +||++||+
T Consensus 289 ~d~~------~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~ 362 (486)
T 2fr1_A 289 TDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSF 362 (486)
T ss_dssp TCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEH
T ss_pred CCHH------HHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCh
Confidence 9875 67776654 59999999975421 3445567788887 89999997
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
.+.
T Consensus 363 a~~ 365 (486)
T 2fr1_A 363 ASA 365 (486)
T ss_dssp HHH
T ss_pred Hhc
Confidence 543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5e-12 Score=119.83 Aligned_cols=129 Identities=17% Similarity=0.156 Sum_probs=89.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+|+||.++++.|+++|.+ |+++.|+.. .+.+.+.... .++.++.+|++
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~---Vvl~~r~~~----~~~l~~~~~~--------------~~~~~~~~Dvt 269 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGAT---VVAIDVDGA----AEDLKRVADK--------------VGGTALTLDVT 269 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECGGG----HHHHHHHHHH--------------HTCEEEECCTT
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCE---EEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEecC
Confidence 47899999999999999999999999865 888887532 2223222211 24568899999
Q ss_pred CCCCCCCHHHHHHHhc-------C-ccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVLRR-------N-VTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~-------~-vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+.. .+..+++ + +|+||||||..... ..+...+++|+.| +||
T Consensus 270 d~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV 343 (454)
T 3u0b_A 270 ADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVI 343 (454)
T ss_dssp STT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEE
Confidence 976 4444432 3 99999999976421 3456678888887 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++||+.+.... ..+..|..+|..-+.+.+
T Consensus 344 ~iSS~a~~~g~------------~g~~~YaasKaal~~l~~ 372 (454)
T 3u0b_A 344 GLSSMAGIAGN------------RGQTNYATTKAGMIGLAE 372 (454)
T ss_dssp EECCHHHHHCC------------TTCHHHHHHHHHHHHHHH
T ss_pred EEeChHhCCCC------------CCCHHHHHHHHHHHHHHH
Confidence 99998654211 123457777775555444
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.7e-11 Score=108.81 Aligned_cols=129 Identities=19% Similarity=0.321 Sum_probs=86.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+||||||++|+++++.|+++|++ |++++|+.... .+.+.+. . ..+++++.+|+.+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~--~~~~~~l-~--------------~~~v~~v~~Dl~d~~ 71 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSK--TTLLDEF-Q--------------SLGAIIVKGELDEHE 71 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSC--HHHHHHH-H--------------HTTCEEEECCTTCHH
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc---EEEEECCCCch--hhHHHHh-h--------------cCCCEEEEecCCCHH
Confidence 58999999999999999999999877 89999986421 1122111 1 147889999999875
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCccccH---HHHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCCh-HHHHHH
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFDENI---KVAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDY-KDFMEL 284 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~---~~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~-y~~yk~ 284 (298)
.+..+++++|+|||+|+........ +...+.+ +. +||+ |.++... .|.. +..+ ...| .
T Consensus 72 ------~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v~--S~~g~~~----~~~~---~~~p~~~~y-~ 134 (318)
T 2r6j_A 72 ------KLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIK-RFLP--SDFGVEE----DRIN---ALPPFEALI-E 134 (318)
T ss_dssp ------HHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCC-EEEC--SCCSSCT----TTCC---CCHHHHHHH-H
T ss_pred ------HHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCC-EEEe--eccccCc----cccc---CCCCcchhH-H
Confidence 7889999999999999975432211 1122222 32 6664 5554321 2211 2222 3567 8
Q ss_pred HHHHHHHHHhh
Q psy14522 285 VMSRSDDNLEE 295 (298)
Q Consensus 285 sK~~aE~~l~~ 295 (298)
+|+.+|+++++
T Consensus 135 sK~~~e~~~~~ 145 (318)
T 2r6j_A 135 RKRMIRRAIEE 145 (318)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=108.25 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=82.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|++|||||+|+||+++++.|+++|++ |+++.|+.... +.+.+ +.. ...++..+ |..+..
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~~-l~~------------~~~~~~~~--d~~~v~ 60 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQK---DELEA-FAE------------TYPQLKPM--SEQEPA 60 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSH---HHHHH-HHH------------HCTTSEEC--CCCSHH
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHH-HHh------------cCCcEEEE--CHHHHH
Confidence 57999999999999999999999876 88888864321 22222 111 01233333 332211
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccc-Cc-------cccHHHHhhccccc------------------eEEEEeCCcccCC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATV-RF-------DENIKVAIAINIFG------------------SFVHVSTAYTHCP 263 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~-~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~~~~~ 263 (298)
-..+.+.+...++|++|||||.. .. ...+...+++|+.| +||++||..+...
T Consensus 61 --~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 138 (254)
T 1zmt_A 61 --ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP 138 (254)
T ss_dssp --HHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC
T ss_pred --HHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC
Confidence 00112222335899999999975 21 13456678888887 8999999865422
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...+..|..+|...+.+.+.+
T Consensus 139 ------------~~~~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 139 ------------WKELSTYTSARAGACTLANAL 159 (254)
T ss_dssp ------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCchHHHHHHHHHHHHHHHH
Confidence 112456777788777766543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=7.8e-12 Score=119.54 Aligned_cols=134 Identities=20% Similarity=0.203 Sum_probs=94.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
++++|||||+|+||.++++.|+++|.. +|+++.|+.......+++.+.+.. ...++.++.+|+++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~--~vvl~~R~~~~~~~~~~l~~~l~~------------~g~~v~~~~~Dvtd~ 304 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA--HLVLTSRRGADAPGAAELRAELEQ------------LGVRVTIAACDAADR 304 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHH------------TTCEEEEEECCTTCH
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc--EEEEEeCCCCChHHHHHHHHHHHh------------cCCeEEEEEccCCCH
Confidence 389999999999999999999999853 488888864433333333333221 235789999999997
Q ss_pred CCCCCHHHHHHHhc------CccEEEEcCccc-Cc-------cccHHHHhhccccc--------------eEEEEeCCcc
Q psy14522 209 GLGLSAADRAVLRR------NVTVVFHGAATV-RF-------DENIKVAIAINIFG--------------SFVHVSTAYT 260 (298)
Q Consensus 209 ~~gl~~~~~~~l~~------~vd~Vih~A~~~-~~-------~~~~~~~~~~Nv~g--------------~~v~iSS~~~ 260 (298)
. .+..+++ .+|+||||||.. .. ...+...+++|+.| +||++||+.+
T Consensus 305 ~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~ 378 (496)
T 3mje_A 305 E------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAA 378 (496)
T ss_dssp H------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHH
T ss_pred H------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHh
Confidence 6 6666654 489999999976 21 13456678899888 8999999855
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
.... .....|..+|...+.+.+
T Consensus 379 ~~g~------------~g~~~YaAaKa~ldala~ 400 (496)
T 3mje_A 379 VWGS------------GGQPGYAAANAYLDALAE 400 (496)
T ss_dssp HTTC------------TTCHHHHHHHHHHHHHHH
T ss_pred cCCC------------CCcHHHHHHHHHHHHHHH
Confidence 4211 123467777776666654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.7e-11 Score=107.98 Aligned_cols=132 Identities=15% Similarity=0.268 Sum_probs=87.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC-Ccc--chhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK-KGK--TVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~-~~~--~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.|+|+||||||++|+++++.|++.|++ |++++|+. +.. ...+.+... . ..+++++.+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~l~~~-~--------------~~~v~~v~~D~ 65 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHP---TFIYARPLTPDSTPSSVQLREEF-R--------------SMGVTIIEGEM 65 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECCCCTTCCHHHHHHHHHH-H--------------HTTCEEEECCT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCc---EEEEECCcccccChHHHHHHHHh-h--------------cCCcEEEEecC
Confidence 478999999999999999999999877 99999975 211 111111111 1 15789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCccccH---HHHhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCCh-HH
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENI---KVAIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDY-KD 280 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~---~~~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~-y~ 280 (298)
++++ .+..+++++|+|||+|+........ +...+.+ +. +|| +|.++.. ..|.. +..+ ..
T Consensus 66 ~d~~------~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v--~S~~g~~----~~~~~---~~~p~~~ 129 (321)
T 3c1o_A 66 EEHE------KMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIK-RFL--PSDFGCE----EDRIK---PLPPFES 129 (321)
T ss_dssp TCHH------HHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCC-EEE--CSCCSSC----GGGCC---CCHHHHH
T ss_pred CCHH------HHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCcc-EEe--ccccccC----ccccc---cCCCcch
Confidence 9875 7889999999999999975422221 1122223 32 666 4555432 12221 2223 45
Q ss_pred HHHHHHHHHHHHHhh
Q psy14522 281 FMELVMSRSDDNLEE 295 (298)
Q Consensus 281 ~yk~sK~~aE~~l~~ 295 (298)
.| .+|+.+|++++.
T Consensus 130 ~y-~sK~~~e~~~~~ 143 (321)
T 3c1o_A 130 VL-EKKRIIRRAIEA 143 (321)
T ss_dssp HH-HHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHH
Confidence 78 999999999864
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=109.73 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=72.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+|||||||||||+++++.|++. |++ |++++|+...... ....+++++.+|++++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~---V~~~~R~~~~~~~---------------------~~~~~v~~~~~D~~d~ 56 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDH---FHIGVRNVEKVPD---------------------DWRGKVSVRQLDYFNQ 56 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTT---EEEEESSGGGSCG---------------------GGBTTBEEEECCTTCH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCc---EEEEECCHHHHHH---------------------hhhCCCEEEEcCCCCH
Confidence 57999999999999999999887 776 9999997542110 0125789999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCcccc-HH-------HHhhccccceEEEEeCCc
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDEN-IK-------VAIAINIFGSFVHVSTAY 259 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~-~~-------~~~~~Nv~g~~v~iSS~~ 259 (298)
. .+..+++++|+|||+|+....... .. ...+.++. +|||+||..
T Consensus 57 ~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~-~iv~~Ss~~ 108 (289)
T 3e48_A 57 E------SMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVA-HIIFIGYYA 108 (289)
T ss_dssp H------HHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCC-EEEEEEESC
T ss_pred H------HHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCC-EEEEEcccC
Confidence 6 799999999999999997543211 11 11111221 999999953
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=7.3e-12 Score=113.35 Aligned_cols=140 Identities=13% Similarity=0.084 Sum_probs=85.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC------ccchhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK------GKTVSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~------~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|+++||||+|+||+++++.|+++|++ |++.+|... .....+.+.+.+.. ..- .
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~---Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~--------------~~~-~ 68 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEEIRR--------------RGG-K 68 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHHHHH--------------TTC-E
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCcccccccCCHHHHHHHHHHHHh--------------hCC-e
Confidence 46899999999999999999999999876 777655321 11111222111110 011 1
Q ss_pred EecCCCCCCCC-CCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 201 VTGDVSLPGLG-LSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 201 v~~Dl~~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+.+|+++..-- -..+.+.....++|++|||||..... ..++..+++|+.| +||+
T Consensus 69 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~ 148 (319)
T 1gz6_A 69 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM 148 (319)
T ss_dssp EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 24688876410 00011222245799999999975421 3456678888887 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||..+.... + .+..|..+|+..+.+.+.+
T Consensus 149 vsS~~~~~~~----------~--~~~~Y~aSK~a~~~~~~~l 178 (319)
T 1gz6_A 149 TASASGIYGN----------F--GQANYSAAKLGLLGLANTL 178 (319)
T ss_dssp ECCHHHHHCC----------T--TCHHHHHHHHHHHHHHHHH
T ss_pred ECChhhccCC----------C--CCHHHHHHHHHHHHHHHHH
Confidence 9997443111 1 2456777788777665543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=112.99 Aligned_cols=128 Identities=19% Similarity=0.125 Sum_probs=86.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC-CCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD-VSL 207 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D-l~~ 207 (298)
+|+|+|||||||||+++++.|+++|++ |++++|+..... .+.+ . ...+++++.+| +++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~-~~~l----~-------------~~~~v~~v~~D~l~d 63 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLI-AEEL----Q-------------AIPNVTLFQGPLLNN 63 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHH-HHHH----H-------------TSTTEEEEESCCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCChhh-HHHH----h-------------hcCCcEEEECCccCC
Confidence 678999999999999999999999877 899999765321 0111 0 01468899999 988
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccH--HH----Hhhcc-ccceEEEEeCCcccCCCCCccCcCCCCCCChHH
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENI--KV----AIAIN-IFGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKD 280 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~--~~----~~~~N-v~g~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~ 280 (298)
+. .+..+++++|+|||+++........ .. ..+.+ + ++|||+||.+.... .+ .+..+
T Consensus 64 ~~------~l~~~~~~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v-~~~V~~SS~~~~~~----~~----~~~~~-- 126 (352)
T 1xgk_A 64 VP------LMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTI-QHYIYSSMPDHSLY----GP----WPAVP-- 126 (352)
T ss_dssp HH------HHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCC-SEEEEEECCCGGGT----SS----CCCCT--
T ss_pred HH------HHHHHHhcCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCc-cEEEEeCCcccccc----CC----CCCcc--
Confidence 65 7888899999999999754211000 11 11222 2 29999999863111 11 12233
Q ss_pred HHHHHHHHHHHHHhh
Q psy14522 281 FMELVMSRSDDNLEE 295 (298)
Q Consensus 281 ~yk~sK~~aE~~l~~ 295 (298)
|..+|+.+|++++.
T Consensus 127 -y~~sK~~~E~~~~~ 140 (352)
T 1xgk_A 127 -MWAPKFTVENYVRQ 140 (352)
T ss_dssp -TTHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHH
Confidence 45789999999875
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=117.64 Aligned_cols=138 Identities=15% Similarity=0.095 Sum_probs=93.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-cCCCCc----------cchhHHHHHHHHHHHHhhhhhcCccc
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-VRPKKG----------KTVSERLDELFEDRLFSRLKAEVPHF 194 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~----------~~~~~rl~~~~~~~~~~~l~~~~~~~ 194 (298)
+..++++|||||+|+||.++++.|+++|.. +|+++ .|+... ....+.+.+.+. ..
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~------------~~ 313 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA------------DL 313 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHHHHH------------HH
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHHHHH------------hc
Confidence 456899999999999999999999999865 36666 777432 111222222221 11
Q ss_pred cCCeEEEecCCCCCCCCCCHHHHHHHhc------CccEEEEcCcccCcc-------ccHHHHhhccccc-----------
Q psy14522 195 RSKISVVTGDVSLPGLGLSAADRAVLRR------NVTVVFHGAATVRFD-------ENIKVAIAINIFG----------- 250 (298)
Q Consensus 195 ~~~v~~v~~Dl~~~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------- 250 (298)
..++.++.+|+++.. .+..+++ .+|+||||||..... ..+...+++|+.|
T Consensus 314 g~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~ 387 (525)
T 3qp9_A 314 GATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREA 387 (525)
T ss_dssp TCEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 257899999999976 6666654 479999999975321 3455667788776
Q ss_pred --------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 --------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 --------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+... ....+.|..+|...+.+.++
T Consensus 388 ~~~~~~~~~iV~~SS~a~~~g------------~~g~~~YaaaKa~l~~lA~~ 428 (525)
T 3qp9_A 388 AAAGGRPPVLVLFSSVAAIWG------------GAGQGAYAAGTAFLDALAGQ 428 (525)
T ss_dssp C----CCCEEEEEEEGGGTTC------------CTTCHHHHHHHHHHHHHHTS
T ss_pred cccCCCCCEEEEECCHHHcCC------------CCCCHHHHHHHHHHHHHHHH
Confidence 6899999865422 11245688888877776543
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.5e-11 Score=103.71 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=78.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEe-c--CCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL-V--RPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l-~--R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
+|+++||||+|+||+++++.|+++|++ |+++ . |+.. ++++.... . ....+. |.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~r~~~------~~~~~~~~------------~-~~~~~~--~~ 56 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT---VVCHDASFADAA------ERQRFESE------------N-PGTIAL--AE 56 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSHH------HHHHHHHH------------S-TTEEEC--CC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCcCCHH------HHHHHHHH------------h-CCCccc--CH
Confidence 478999999999999999999999876 8888 5 7531 22221110 0 112221 32
Q ss_pred CCCCCCCCHHHHHHH---hcCccEEEEcCcccCc----------cccHHHHhhccccc------------------eEEE
Q psy14522 206 SLPGLGLSAADRAVL---RRNVTVVFHGAATVRF----------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l---~~~vd~Vih~A~~~~~----------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
.+.. ..++.+ ..++|++|||||.... ...+...+++|+.| +||+
T Consensus 57 ~~v~-----~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 131 (244)
T 1zmo_A 57 QKPE-----RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIF 131 (244)
T ss_dssp CCGG-----GHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHH-----HHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 2211 122333 3479999999997543 13456678888887 7999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.... ++ +..|..+|...+.+.+.
T Consensus 132 isS~~~~~~~---------~~---~~~Y~asK~a~~~~~~~ 160 (244)
T 1zmo_A 132 ITSSVGKKPL---------AY---NPLYGPARAATVALVES 160 (244)
T ss_dssp ECCGGGTSCC---------TT---CTTHHHHHHHHHHHHHH
T ss_pred ECChhhCCCC---------CC---chHHHHHHHHHHHHHHH
Confidence 9998664321 12 23466667766666554
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.3e-11 Score=116.83 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=81.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC------ccchhHHHHHHHHHHHHhhhhhcCccccCCeE
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK------GKTVSERLDELFEDRLFSRLKAEVPHFRSKIS 199 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~------~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~ 199 (298)
.+.+|+++||||+|+||+++++.|+++|.+ |++++|... .....+.+.+.+.. ....
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~---Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~------------~~~~-- 78 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAK---VVVNDLGGTHSGDGASQRAADIVVDEIRK------------AGGE-- 78 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEC--------------CHHHHHHHHHH------------TTCC--
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcccccccCCHHHHHHHHHHHHH------------hCCe--
Confidence 367899999999999999999999999876 888877211 11112222222111 0112
Q ss_pred EEecCCCCCCCCCCHHHHHHHhc-------CccEEEEcCcccCc-------cccHHHHhhccccc---------------
Q psy14522 200 VVTGDVSLPGLGLSAADRAVLRR-------NVTVVFHGAATVRF-------DENIKVAIAINIFG--------------- 250 (298)
Q Consensus 200 ~v~~Dl~~~~~gl~~~~~~~l~~-------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------- 250 (298)
+.+|+++.. ....+++ ++|++|||||.... ...+...+++|+.|
T Consensus 79 -~~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~ 151 (613)
T 3oml_A 79 -AVADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ 151 (613)
T ss_dssp -EEECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -EEEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 236887764 3444433 68999999997532 13566778889888
Q ss_pred ---eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ---SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ---~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||++||+.+.... ..+..|..+|...+.+.+.
T Consensus 152 ~~g~IV~isS~a~~~~~------------~~~~~Y~asKaal~~lt~~ 187 (613)
T 3oml_A 152 NYGRIIMTSSNSGIYGN------------FGQVNYTAAKMGLIGLANT 187 (613)
T ss_dssp TCEEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCHHHcCCC------------CCChHHHHHHHHHHHHHHH
Confidence 89999998553211 1234566677766666544
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.03 E-value=1.7e-10 Score=104.63 Aligned_cols=128 Identities=9% Similarity=0.067 Sum_probs=74.5
Q ss_pred cCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 128 RGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 128 ~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
++|++|||||++ +||.+++++|++.|.+ |++..|.... ....|-.+.... ..............+.++.+|+
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~---Vv~~~~~~~~-~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dv 74 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVY-NIFMKNYKNGKF--DNDMIIDKDKKMNILDMLPFDA 74 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECHHHH-HHHHHHHHTTTT--TGGGBCSSSCBCCEEEEEECCT
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecCccc-cccccchHHHHH--HHHHHHhhcccccccccccccc
Confidence 368999999875 9999999999999876 7765553200 000000000000 0000000011123467888999
Q ss_pred CCCCCC-C----------------C----HHHHHHHhcCccEEEEcCcccC-----c----cccHHHHhhccccc-----
Q psy14522 206 SLPGLG-L----------------S----AADRAVLRRNVTVVFHGAATVR-----F----DENIKVAIAINIFG----- 250 (298)
Q Consensus 206 ~~~~~g-l----------------~----~~~~~~l~~~vd~Vih~A~~~~-----~----~~~~~~~~~~Nv~g----- 250 (298)
++.... . + .+.+...+.++|++|||||... + ...+...+++|+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 154 (329)
T 3lt0_A 75 SFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC 154 (329)
T ss_dssp TCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 876211 0 1 1122222347999999999631 1 13456778999988
Q ss_pred -----------eEEEEeCCccc
Q psy14522 251 -----------SFVHVSTAYTH 261 (298)
Q Consensus 251 -----------~~v~iSS~~~~ 261 (298)
+||++||+.+.
T Consensus 155 ~~~~p~m~~~g~Iv~isS~~~~ 176 (329)
T 3lt0_A 155 KYFVNIMKPQSSIISLTYHASQ 176 (329)
T ss_dssp HHHGGGEEEEEEEEEEECGGGT
T ss_pred HHHHHHHhhCCeEEEEeCcccc
Confidence 89999998654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-09 Score=98.92 Aligned_cols=92 Identities=13% Similarity=0.030 Sum_probs=59.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHH-hCCCcceEEEecCCCCccch---------hHHHHHHHHHHHHhhhhhcCccccC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLR-ACPHLERVYLLVRPKKGKTV---------SERLDELFEDRLFSRLKAEVPHFRS 196 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~-~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~l~~~~~~~~~ 196 (298)
..+|++|||||+++||.++++.|++ .|.+ |+++.|....... .+.+.+... ....
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~---Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~------------~~G~ 109 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGAD---TLGVFFERPGEEGKPGTSGWYNSAAFHKFAA------------QKGL 109 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCBTTBCCCHHHHHHHHHHHHHH------------HTTC
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCE---EEEEeCCchhhhhhcccccchhHHHHHHHHH------------hcCC
Confidence 4689999999999999999999999 9876 7777776433211 111221111 1124
Q ss_pred CeEEEecCCCCCCC-CCCHHHHHHHhcCccEEEEcCcc
Q psy14522 197 KISVVTGDVSLPGL-GLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 197 ~v~~v~~Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
++..+.+|++++.- .-..+...+.+.++|++|||||.
T Consensus 110 ~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 110 YAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 67889999998650 00011222223479999999986
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.98 E-value=9.4e-10 Score=110.90 Aligned_cols=136 Identities=19% Similarity=0.192 Sum_probs=93.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHH-HhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLL-RACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll-~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+..+++++||||+|+||..+++.|+ ++|.. +|+++.|+....+..+.+.+.+.. ...++.++.+|
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~------------~G~~v~~~~~D 592 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVR--NLVLVSRRGPAASGAAELVAQLTA------------YGAEVSLQACD 592 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCC--EEEEEESSGGGSTTHHHHHHHHHH------------TTCEEEEEECC
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCc--EEEEeccCccchHHHHHHHHHHHh------------cCCcEEEEEee
Confidence 3468899999999999999999999 67743 488888874333323333222221 12578899999
Q ss_pred CCCCCCCCCHHHHHHHhc------CccEEEEcCcccCc-------cccHHHHhhccccc------------eEEEEeCCc
Q psy14522 205 VSLPGLGLSAADRAVLRR------NVTVVFHGAATVRF-------DENIKVAIAINIFG------------SFVHVSTAY 259 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------~~v~iSS~~ 259 (298)
+++.. .+..+++ .+|++|||||.... ...|...+++|+.| +||++||+.
T Consensus 593 vsd~~------~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~a 666 (795)
T 3slk_A 593 VADRE------TLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVS 666 (795)
T ss_dssp TTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETH
T ss_pred cCCHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHH
Confidence 99876 6666654 47999999997532 14566788999999 799999986
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHH
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNL 293 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l 293 (298)
+.... | ..+.|..+|...+.+-
T Consensus 667 g~~g~----------~--g~~~YaAaka~~~alA 688 (795)
T 3slk_A 667 GVLGS----------G--GQGNYAAANSFLDALA 688 (795)
T ss_dssp HHHTC----------S--SCHHHHHHHHHHHHHH
T ss_pred hcCCC----------C--CCHHHHHHHHHHHHHH
Confidence 54221 1 2345666666555553
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=7.6e-10 Score=98.64 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=31.5
Q ss_pred hcCceeeecCCC--CCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGT--GFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGat--G~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+++||||+ |+||+++++.|++.|++ |+++.|.
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~---V~~~~r~ 43 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEeecc
Confidence 467999999999 99999999999999876 8877653
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.9e-09 Score=98.20 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=60.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHH-hCCCcceEEEecCCCCccch---------hHHHHHHHHHHHHhhhhhcCccccCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLR-ACPHLERVYLLVRPKKGKTV---------SERLDELFEDRLFSRLKAEVPHFRSK 197 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~-~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~l~~~~~~~~~~ 197 (298)
.+|++|||||+++||+++++.|++ .|.+ |+++.|....... ...+.+... ....+
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~---Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~------------~~G~~ 124 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD---TLGVFFEKPGTASKAGTAGWYNSAAFDKHAK------------AAGLY 124 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHHH------------HTTCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE---EEEEeCCchhhhhhhcccccchhHHHHHHHH------------hcCCc
Confidence 588999999999999999999999 9876 7777776443221 011212111 11246
Q ss_pred eEEEecCCCCCCCC-CCHHHHHHHh-cCccEEEEcCcc
Q psy14522 198 ISVVTGDVSLPGLG-LSAADRAVLR-RNVTVVFHGAAT 233 (298)
Q Consensus 198 v~~v~~Dl~~~~~g-l~~~~~~~l~-~~vd~Vih~A~~ 233 (298)
+..+.+|++++.-- -..+...+.+ .++|++|||||.
T Consensus 125 a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 125 SKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 78899999986510 0011223334 679999999986
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=106.91 Aligned_cols=113 Identities=10% Similarity=0.100 Sum_probs=76.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC-
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV- 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl- 205 (298)
+.+|+++||||+++||+++++.|+++|.+ |++..|... +.+.+.+.. ...++..+.+|+
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~-----~~~~~~i~~------------~g~~~~~~~~Dv~ 379 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAK---VVVNDFKDA-----TKTVDEIKA------------AGGEAWPDQHDVA 379 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC-----HHHHHHHHH------------TTCEEEEECCCHH
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCE---EEEEeCccH-----HHHHHHHHh------------cCCeEEEEEcChH
Confidence 56899999999999999999999999876 777766321 122121111 113566777888
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCcc
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAYT 260 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~~ 260 (298)
.+.. --.+...+.+.++|++|||||.... ...|...+++|+.| +||++||+.+
T Consensus 380 ~~~~--~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 380 KDSE--AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp HHHH--HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred HHHH--HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 4321 0011223334579999999997532 13567788999988 8999999865
Q ss_pred c
Q psy14522 261 H 261 (298)
Q Consensus 261 ~ 261 (298)
.
T Consensus 458 ~ 458 (604)
T 2et6_A 458 I 458 (604)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.4e-09 Score=103.76 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=72.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC------ccchhHHHHHHHHHHHHhhhhhcCccccCCeEE
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK------GKTVSERLDELFEDRLFSRLKAEVPHFRSKISV 200 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~------~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~ 200 (298)
+.+|+++||||+++||+++++.|+++|.+ |++.+|... .....+.+.+.+.. ...+.
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~------------~g~~~-- 68 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAK---VVVNDLGGALNGQGGNSKAADVVVDEIVK------------NGGVA-- 68 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECC-----------CHHHHHHHHHHH------------TTCEE--
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCccccccccchHHHHHHHHHHHh------------cCCeE--
Confidence 46899999999999999999999999876 777776531 01112222222111 01122
Q ss_pred EecCCCCCCCCC-CHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 201 VTGDVSLPGLGL-SAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 201 v~~Dl~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
..|+++..-.- -.+...+.+.++|++|||||.... ...|+..+++|+.| +||+
T Consensus 69 -~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVn 147 (604)
T 2et6_A 69 -VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVN 147 (604)
T ss_dssp -EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred -EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 24665543100 011222334579999999997531 13567788999998 8999
Q ss_pred EeCCccc
Q psy14522 255 VSTAYTH 261 (298)
Q Consensus 255 iSS~~~~ 261 (298)
+||+.+.
T Consensus 148 isS~ag~ 154 (604)
T 2et6_A 148 TSSPAGL 154 (604)
T ss_dssp ECCHHHH
T ss_pred ECCHHHc
Confidence 9998653
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.1e-09 Score=110.69 Aligned_cols=132 Identities=17% Similarity=0.093 Sum_probs=86.1
Q ss_pred hcCceeeecCCCCC-CchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF-MGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~-iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+|+ ||+++++.|++.|.+ |+++ .|...... .+.+.+ .........++.++.+|
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~---VVL~~~R~~e~le---e~a~eL--------~ael~a~Ga~V~vV~~D 539 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQVT---DYYQSI--------YAKYGAKGSTLIVVPFN 539 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCE---EEEEESSCSTTTT---THHHHT--------TTTTCCTTCEEEEEECC
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCE---EEEEeCCCHHHHH---HHHHHH--------HHHhhcCCCeEEEEEeC
Confidence 56899999999998 999999999999876 7766 55533211 111111 00001113468899999
Q ss_pred CCCCCCCCCHHHHHHHh------------c-CccEEEEcCcccCcc----------ccHHHHhhccccc-----------
Q psy14522 205 VSLPGLGLSAADRAVLR------------R-NVTVVFHGAATVRFD----------ENIKVAIAINIFG----------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~------------~-~vd~Vih~A~~~~~~----------~~~~~~~~~Nv~g----------- 250 (298)
+++.. .+..++ . ++|++|||||..... ..+...+++|+.|
T Consensus 540 VTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~l 613 (1688)
T 2pff_A 540 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA 613 (1688)
T ss_dssp SSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99976 444443 2 589999999975321 2345667778775
Q ss_pred ---------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHH
Q psy14522 251 ---------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDN 292 (298)
Q Consensus 251 ---------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~ 292 (298)
+||++||+.+... . .+.|..+|..-+.+
T Consensus 614 p~M~krggGrIVnISSiAG~~G-----------g---~saYaASKAAL~aL 650 (1688)
T 2pff_A 614 RGIETRPAQVILPMSPNHGTFG-----------G---DGMYSESKLSLETL 650 (1688)
T ss_dssp HTCTTSCEEECCCCCSCTTTSS-----------C---BTTHHHHHHHHTHH
T ss_pred hHHHhCCCCEEEEEEChHhccC-----------C---chHHHHHHHHHHHH
Confidence 6889999765421 1 23466677766665
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=5.2e-09 Score=97.76 Aligned_cols=87 Identities=9% Similarity=0.030 Sum_probs=60.9
Q ss_pred hhcCceeeecCCCCCCchh--HHHHHHHhCCCcceEEEecCCCCccch---------hHHHHHHHHHHHHhhhhhcCccc
Q psy14522 126 FYRGASVFVTGGTGFMGKT--LTEKLLRACPHLERVYLLVRPKKGKTV---------SERLDELFEDRLFSRLKAEVPHF 194 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~--l~~~Ll~~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~l~~~~~~~ 194 (298)
...+|++|||||+++||.+ +++.|.+.|.+ |+++.|....... .+.+.+... ..
T Consensus 57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~---Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 121 (418)
T 4eue_A 57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAH---TIGVSYETGATDRRIGTAGWYNNIFFKEFAK------------KK 121 (418)
T ss_dssp CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCE---EEEEECCCCCCSSCCCCHHHHHHHHHHHHHH------------HT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCE---EEEEecCcchhhhcccccccchHHHHHHHHH------------Hc
Confidence 3578999999999999999 99999888866 8888876433210 123332221 12
Q ss_pred cCCeEEEecCCCCCCCCCCHHHHHHH-------hcCccEEEEcCcc
Q psy14522 195 RSKISVVTGDVSLPGLGLSAADRAVL-------RRNVTVVFHGAAT 233 (298)
Q Consensus 195 ~~~v~~v~~Dl~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~ 233 (298)
..++..+.+|+++++ ..+.+ ..++|++|||||.
T Consensus 122 g~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 122 GLVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp TCCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCcc
Confidence 256889999999865 33333 2368999999986
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-09 Score=97.63 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=31.7
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|+++|||| +|+||+++++.|++.|++ |+++.|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~ 44 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGAR---VALGTWP 44 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCE---EEEEECH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCE---EEEEecc
Confidence 46899999999 899999999999999876 8887764
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-09 Score=97.83 Aligned_cols=36 Identities=28% Similarity=0.351 Sum_probs=31.4
Q ss_pred hcCceeeecCC--CCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGG--TGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGa--tG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+|++||||| +|+||+++++.|++.|++ |+++.|+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~ 44 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGAR---VLVGTWP 44 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCE---EEEEECH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEEEecc
Confidence 46789999999 899999999999999876 7777653
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.4e-09 Score=114.26 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=76.9
Q ss_pred hcCceeeecCCCCC-CchhHHHHHHHhCCCcceEEEec-CCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF-MGKTLTEKLLRACPHLERVYLLV-RPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~-iG~~l~~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+|+ ||.++++.|++.|.+ |+++. |... ......+.+.. .+ .....++.++.+|
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~---VVl~~~R~~~---~l~~~a~eL~~----el----~~~G~~v~~v~~D 715 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK---VIVTTSRFSR---QVTEYYQGIYA----RC----GARGSQLVVVPFN 715 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESSCCH---HHHHHHHHHHH----HH----CCTTCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCChH---HHHHHHHHHHH----Hh----hccCCeEEEEEcC
Confidence 56899999999999 999999999999866 77774 4322 11111111110 00 1112468899999
Q ss_pred CCCCCCCCCHHHHHHHh----------c-CccEEEEcCcccCcc----------ccHHHHhhccccc-------------
Q psy14522 205 VSLPGLGLSAADRAVLR----------R-NVTVVFHGAATVRFD----------ENIKVAIAINIFG------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~----------~-~vd~Vih~A~~~~~~----------~~~~~~~~~Nv~g------------- 250 (298)
+++.. .+..++ . ++|++|||||..... ..+...+.+|+.|
T Consensus 716 Vsd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~ 789 (1878)
T 2uv9_A 716 QGSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERG 789 (1878)
T ss_dssp TTCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99865 444443 2 589999999975321 2345667778775
Q ss_pred -------eEEEEeCCccc
Q psy14522 251 -------SFVHVSTAYTH 261 (298)
Q Consensus 251 -------~~v~iSS~~~~ 261 (298)
+||++||+.+.
T Consensus 790 M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 790 YETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp CCSCCEEECCEECSCSSS
T ss_pred HHhCCCCEEEEEcchhhc
Confidence 78999998654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.7e-10 Score=103.28 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=80.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCC----CcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACP----HLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.++|+||||+||||++++..|+..|. ....|+++++... ..+...... .+.. ..+.++ +|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~----~~~~~g~~~-----dl~~------~~~~~~-~d 67 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVVM-----ELED------CAFPLL-AG 67 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-----HHHT------TTCTTE-EE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc----hhhccchhh-----hhhc------cccccc-CC
Confidence 46899999999999999999999874 1135888877431 111111000 0100 111222 46
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccCc-cccHHHHhhccccc----------------eEEEEeCCcccCCCCCc
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVRF-DENIKVAIAINIFG----------------SFVHVSTAYTHCPRQEI 267 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~~~~~~~~~~Nv~g----------------~~v~iSS~~~~~~~~~~ 267 (298)
+.+.. .+...++++|+|||+||.... ..+..++++.|+.+ +++++|+.... ..++
T Consensus 68 i~~~~------~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~--~~~~ 139 (327)
T 1y7t_A 68 LEATD------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT--NALI 139 (327)
T ss_dssp EEEES------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH--HHHH
T ss_pred eEecc------ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh--hHHH
Confidence 65543 456667899999999997642 34455566677665 56666654210 0112
Q ss_pred c-CcC-CCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 268 D-EVF-YPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 268 ~-E~~-~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
. |.. ..+|.++ |..+|..+|+++..
T Consensus 140 ~~~~~~~~~p~~~---yg~tkl~~er~~~~ 166 (327)
T 1y7t_A 140 AYKNAPGLNPRNF---TAMTRLDHNRAKAQ 166 (327)
T ss_dssp HHHTCTTSCGGGE---EECCHHHHHHHHHH
T ss_pred HHHHcCCCChhhe---eccchHHHHHHHHH
Confidence 2 222 1234444 44567777777654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=3.5e-09 Score=113.17 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=77.0
Q ss_pred hcCceeeecCCCCC-CchhHHHHHHHhCCCcceEEEe-cCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTGF-MGKTLTEKLLRACPHLERVYLL-VRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG~-iG~~l~~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+.+|++|||||+|+ ||.++++.|++.|.+ |+++ .|.... .+.+.+.+... + .....++.++.+|
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~---Vvl~~~R~~~~---l~~~~~eL~~~----~----~~~g~~v~~v~~D 738 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQ---VTDYYQSIYAK----Y----GAKGSTLIVVPFN 738 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCE---EEEEESSCCHH---HHHHHHHHHHH----H----CCTTCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCCHHH---HHHHHHHHHHH----h----hcCCCeEEEEEec
Confidence 56899999999998 999999999999876 7776 454321 11111111100 0 1112468899999
Q ss_pred CCCCCCCCCHHHHHHHh------------c-CccEEEEcCcccCcc----------ccHHHHhhccccc-----------
Q psy14522 205 VSLPGLGLSAADRAVLR------------R-NVTVVFHGAATVRFD----------ENIKVAIAINIFG----------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~------------~-~vd~Vih~A~~~~~~----------~~~~~~~~~Nv~g----------- 250 (298)
+++.. .+..++ . ++|++|||||..... ..+...+.+|+.|
T Consensus 739 Vsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~l 812 (1887)
T 2uv8_A 739 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA 812 (1887)
T ss_dssp TTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99865 444433 1 589999999975321 2345667778775
Q ss_pred ---------eEEEEeCCccc
Q psy14522 251 ---------SFVHVSTAYTH 261 (298)
Q Consensus 251 ---------~~v~iSS~~~~ 261 (298)
+||++||+.+.
T Consensus 813 p~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 813 RGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp TTCCSCCEEEEEEECSCTTC
T ss_pred hhhhhCCCCEEEEEcChHhc
Confidence 79999998654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=2.2e-08 Score=111.39 Aligned_cols=136 Identities=20% Similarity=0.090 Sum_probs=88.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+|+++||||+|+||+.+++.|+++|.. +|+++.|+...........+.+. ....++.++.+|++
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~------------~~g~~v~~~~~Dvs 1947 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQ--KLVLTSRSGIRTGYQARQVREWR------------RQGVQVLVSTSNAS 1947 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCSHHHHHHHHHHH------------HTTCEEEEECCCSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCC--EEEEEeCCCcchHHHHHHHHHHH------------hCCCEEEEEecCCC
Confidence 46889999999999999999999999854 47778887543222222211111 01246888999999
Q ss_pred CCCCCCCHHHHHHH------hcCccEEEEcCcccCc-------cccHHHHhhccccc----------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVL------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG----------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g----------------~~v~iSS 257 (298)
+.. .+..+ ...+|++|||||.... ...|...+++|+.| +||++||
T Consensus 1948 d~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS 2021 (2512)
T 2vz8_A 1948 SLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSS 2021 (2512)
T ss_dssp SHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred CHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecc
Confidence 865 33333 2469999999997531 13455667788877 8999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+.+.... | ....|..+|..-+.+.+
T Consensus 2022 ~ag~~g~----------~--g~~~Y~aaKaal~~l~~ 2046 (2512)
T 2vz8_A 2022 VSCGRGN----------A--GQANYGFANSAMERICE 2046 (2512)
T ss_dssp HHHHTTC----------T--TCHHHHHHHHHHHHHHH
T ss_pred hhhcCCC----------C--CcHHHHHHHHHHHHHHH
Confidence 8654221 1 23467777777776655
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.5e-07 Score=69.20 Aligned_cols=76 Identities=17% Similarity=0.090 Sum_probs=57.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|+|+ |++|+++++.|++.| ..+|++++|+.. ++.... ..++.++.+|+.+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g--~~~v~~~~r~~~------~~~~~~---------------~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSS--NYSVTVADHDLA------ALAVLN---------------RMGVATKQVDAKD 59 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCS--SEEEEEEESCHH------HHHHHH---------------TTTCEEEECCTTC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCC--CceEEEEeCCHH------HHHHHH---------------hCCCcEEEecCCC
Confidence 3578999999 999999999999997 134888888632 221111 1467788899987
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
.. .+..+++++|+|||+++.
T Consensus 60 ~~------~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 60 EA------GLAKALGGFDAVISAAPF 79 (118)
T ss_dssp HH------HHHHHTTTCSEEEECSCG
T ss_pred HH------HHHHHHcCCCEEEECCCc
Confidence 64 788888899999999964
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.5e-07 Score=81.13 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=60.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|+++||||+|++|++++..|++.|.+ |++++|... ..+.+.+.+... .++.++.+|++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~---V~i~~R~~~---~~~~l~~~~~~~-------------~~~~~~~~D~~ 177 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKLD---KAQAAADSVNKR-------------FKVNVTAAETA 177 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHHHHH-------------HTCCCEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCHH---HHHHHHHHHHhc-------------CCcEEEEecCC
Confidence 46899999999999999999999999865 888888632 112222211110 13556778888
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+++ .+..+++.+|+|||||+.
T Consensus 178 ~~~------~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 178 DDA------SRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp SHH------HHHHHTTTCSEEEECCCT
T ss_pred CHH------HHHHHHHhCCEEEECCCc
Confidence 765 678888899999999985
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=3.5e-06 Score=94.50 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=61.4
Q ss_pred hhcCceeeecCCCCC-CchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 126 FYRGASVFVTGGTGF-MGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 126 ~~~~k~vLVTGatG~-iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.+.+|++|||||+++ ||.++++.|++.|.+ |++..|+.... ..+.+++.... + .....++..+.+|
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~---Vvi~~r~~~~~-~~~~~~~l~~~-----l----~~~G~~~~~v~~D 2199 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGAT---VIATTSRLDDD-RLAFYKQLYRD-----H----ARFDATLWVVPAN 2199 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESCCSHH-HHHHHHHHHHH-----H----CCTTCEEEEEECC
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCE---EEEEeCChhhh-hhHHHHHHHHH-----H----hhcCCeEEEEEec
Confidence 368999999999999 999999999999876 88888865421 11112221110 0 1122467889999
Q ss_pred CCCCCCCCCHHHHHHH----h-------cCccEEEEcCcc
Q psy14522 205 VSLPGLGLSAADRAVL----R-------RNVTVVFHGAAT 233 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l----~-------~~vd~Vih~A~~ 233 (298)
+++.. .+..+ . .++|++|||||.
T Consensus 2200 vtd~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2200 MASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp TTCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred CCCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCc
Confidence 99865 44443 2 358999999997
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.01 E-value=7.4e-06 Score=70.17 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=53.2
Q ss_pred cCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcC
Q psy14522 128 RGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191 (298)
Q Consensus 128 ~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~ 191 (298)
.+|+|||||| +|.+|.++++.++++|++ |+++.|......
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~---V~lv~~~~~~~~--------------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE---VCLITTKRALKP--------------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEECTTSCCC---------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc---------------------
Confidence 4799999999 999999999999999977 888877643110
Q ss_pred ccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCcc
Q psy14522 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFD 237 (298)
Q Consensus 192 ~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~ 237 (298)
.....+..+...-...- ...+...+.++|++||+||...+.
T Consensus 58 -~~~~~~~~~~v~s~~em----~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 58 -EPHPNLSIREITNTKDL----LIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -CCCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -cCCCCeEEEEHhHHHHH----HHHHHHhcCCCCEEEEcCcccccc
Confidence 00124444433311100 123344456899999999986643
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.84 E-value=4.4e-06 Score=63.08 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=34.1
Q ss_pred ccccccCCeEEEecCcccchHHHHHHH-------------HhhCCChHHhHHhhc
Q psy14522 65 IQEFYRGASVFVTGGTGFMGKTLTEKL-------------LRACPHLERVYLLVR 106 (298)
Q Consensus 65 ~~~~~~~~~ff~~Gg~sl~~~~l~~~l-------------l~~~ptv~~l~~~i~ 106 (298)
+..+.+++|||.+||+||++.+|+.++ +|.+||++.++.++.
T Consensus 41 ~~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~ 95 (110)
T 2cq8_A 41 VLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLV 95 (110)
T ss_dssp CSCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHH
T ss_pred CCCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHH
Confidence 667899999999999999998887655 456788888886654
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.6e-06 Score=62.40 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=37.0
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
++.++.++++||.+||||+++.++..++ ++.+||++.++.++..
T Consensus 30 ~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~ 85 (93)
T 4i4d_A 30 GRDSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHA 85 (93)
T ss_dssp TCSCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 3467889999999999999998887655 5678999999988775
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=97.80 E-value=5.5e-06 Score=60.47 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=36.5
Q ss_pred ccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhccC
Q psy14522 65 IQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 65 ~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~ 108 (298)
+.++.++++||.+||||+++.++..++ ++.+||++.++.+++..
T Consensus 29 ~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 29 VSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CSSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 457889999999999999998887655 56789999999888764
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.75 E-value=2.4e-05 Score=73.74 Aligned_cols=78 Identities=15% Similarity=0.103 Sum_probs=56.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|+| +|++|+++++.|++.|.+ |++.+|... +.++. . .....+..+.+|+.+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~---V~v~~R~~~------~a~~l------------a-~~~~~~~~~~~Dv~d 58 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIK---VTVACRTLE------SAKKL------------S-AGVQHSTPISLDVND 58 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCE---EEEEESSHH------HHHHT------------T-TTCTTEEEEECCTTC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCE---EEEEECCHH------HHHHH------------H-HhcCCceEEEeecCC
Confidence 467899998 799999999999988754 888888532 11111 0 011246778889887
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.. .+..+++++|+|||+++..
T Consensus 59 ~~------~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 59 DA------ALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp HH------HHHHHHTTSSEEEECCC--
T ss_pred HH------HHHHHHcCCcEEEECCccc
Confidence 54 6777888999999999863
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=3.3e-05 Score=65.89 Aligned_cols=78 Identities=18% Similarity=0.152 Sum_probs=51.3
Q ss_pred hcCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhc
Q psy14522 127 YRGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190 (298)
Q Consensus 127 ~~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~ 190 (298)
+.+|+|||||| +|.+|.++++.|+++|.+ |+++.|.....
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~---V~l~~~~~~l~--------------------- 61 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---VTLVSGPVSLP--------------------- 61 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---EEEEECSCCCC---------------------
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE---EEEEECCcccc---------------------
Confidence 56899999999 699999999999999977 77666643210
Q ss_pred CccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 191 ~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
....+. ..|+.+..- -.+.....+.++|++|||||...
T Consensus 62 ---~~~g~~--~~dv~~~~~--~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 62 ---TPPFVK--RVDVMTALE--MEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp ---CCTTEE--EEECCSHHH--HHHHHHHHGGGCSEEEECCBCCS
T ss_pred ---cCCCCe--EEccCcHHH--HHHHHHHhcCCCCEEEECCcccC
Confidence 001233 345554220 01122333467999999999754
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.71 E-value=3.9e-05 Score=69.26 Aligned_cols=104 Identities=12% Similarity=0.017 Sum_probs=62.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|+||||+|++|..++..|+..|. +..|.++++... .....+ +. .. ....++..+ ..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~d-L~--------~~--~~~~~v~~~----~~- 66 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTAD-IS--------HM--DTGAVVRGF----LG- 66 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHH-HH--------TS--CSSCEEEEE----ES-
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHH-hh--------cc--cccceEEEE----eC-
Confidence 47899999999999999999988762 345888876532 111111 10 00 000122221 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc--------------eEEEEeCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
...+...++++|+|||+|+... .......+...|+.+ .+++++|-
T Consensus 67 -----t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 67 -----QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp -----HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred -----CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 1256677889999999999653 223333445566554 67777763
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.70 E-value=2.3e-05 Score=70.88 Aligned_cols=109 Identities=16% Similarity=0.108 Sum_probs=62.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCC----CcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACP----HLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.++|+||||+||+|++++..|+..|. .+..|.++++... .+.++...... .+.. ....+ ..|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~--~~~~~~~g~~~-----dl~~----~~~~~---~~~ 70 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE--KAQKALQGVMM-----EIDD----CAFPL---LAG 70 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH--HHHHHHHHHHH-----HHHT----TTCTT---EEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc--cccccchhhHH-----HHhh----hcccc---cCc
Confidence 47899999999999999999998763 1135888776410 00112211000 0100 00011 123
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc----------------eEEEEeC
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG----------------SFVHVST 257 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g----------------~~v~iSS 257 (298)
+.... .+...++++|+|||+|+... ...+..+++..|+.+ +|+++|.
T Consensus 71 i~~~~------~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 71 MTAHA------DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEES------SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEec------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 33322 45667789999999999653 223333444444433 7788876
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.69 E-value=7e-05 Score=68.70 Aligned_cols=93 Identities=12% Similarity=-0.003 Sum_probs=57.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHH-HhCCCcceEEEecCCCCccch---------hHHHHHHHHHHHHhhhhhcCccccC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLL-RACPHLERVYLLVRPKKGKTV---------SERLDELFEDRLFSRLKAEVPHFRS 196 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll-~~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~l~~~~~~~~~ 196 (298)
..+|++|||||+.++|.+....|. ..|.. |+++.+....... ...+.+..+ ....
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~---vi~v~~~~~~~~~~~atag~~~~~a~~~~i~------------~~G~ 112 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAA---TIGVSFEKAGSETKYGTPGWYNNLAFDEAAK------------REGL 112 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHHH------------HHTC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCC---EEEEecCCcccccccccccchhHHHHHHHHH------------HcCC
Confidence 467999999999999999998887 56655 6666554322110 111222211 1235
Q ss_pred CeEEEecCCCCCCCC-CCHHHHHHHhcCccEEEEcCccc
Q psy14522 197 KISVVTGDVSLPGLG-LSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 197 ~v~~v~~Dl~~~~~g-l~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
+...+.+|+++++.- -..+.+.+-..++|++||++|..
T Consensus 113 ~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 113 YSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 788999999986510 00112222234799999999964
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.55 E-value=7.8e-05 Score=69.26 Aligned_cols=83 Identities=17% Similarity=0.187 Sum_probs=58.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCc-ceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHL-ERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
++|+|+|| |++|+.+++.|++.|. + ..|.+.+|+.. ..+++.+.+.. ....++..+.+|+++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~-~~~~V~v~~r~~~---~~~~la~~l~~-----------~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNRE-VFSHITLASRTLS---KCQEIAQSIKA-----------KGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTT-TCCEEEEEESCHH---HHHHHHHHHHH-----------TTCCCCEEEECCTTCH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEEECCHH---HHHHHHHHhhh-----------hcCCceEEEEecCCCH
Confidence 57999999 9999999999998852 2 35888888632 12222222110 0013678889999876
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccc
Q psy14522 209 GLGLSAADRAVLRRN--VTVVFHGAATV 234 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~--vd~Vih~A~~~ 234 (298)
. .+.+++++ +|+|||+++..
T Consensus 66 ~------~l~~~l~~~~~DvVin~ag~~ 87 (405)
T 4ina_A 66 E------ELVALINEVKPQIVLNIALPY 87 (405)
T ss_dssp H------HHHHHHHHHCCSEEEECSCGG
T ss_pred H------HHHHHHHhhCCCEEEECCCcc
Confidence 5 78887776 89999999864
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=3e-05 Score=60.36 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=51.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|+|+ |.+|..+++.|.+.|++ |++++|... +.+. + . ......+.+|..+
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~---v~~~d~~~~------~~~~---------~---~---~~~~~~~~~d~~~ 59 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINEE------KVNA---------Y---A---SYATHAVIANATE 59 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCHH------HHHT---------T---T---TTCSEEEECCTTC
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHH---------H---H---HhCCEEEEeCCCC
Confidence 4568999998 99999999999999876 777777521 1110 0 0 0234567788776
Q ss_pred CCCCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 208 PGLGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 208 ~~~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
.. .+..+ .+++|+||++++.
T Consensus 60 ~~------~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 60 EN------ELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp HH------HHHTTTGGGCSEEEECCCS
T ss_pred HH------HHHhcCCCCCCEEEECCCC
Confidence 43 45544 5689999999875
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=56.06 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=54.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|+|+|+ |.+|+++++.|.+.|++ |+++++++. +++.... ..+.++.+|.+++
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~---V~~id~~~~------~~~~~~~---------------~~~~~~~gd~~~~ 60 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKK---VLAVDKSKE------KIELLED---------------EGFDAVIADPTDE 60 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH---------------TTCEEEECCTTCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEECCHH------HHHHHHH---------------CCCcEEECCCCCH
Confidence 568999997 99999999999999887 888887532 2222111 3567889999886
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
. .+..+ ..++|+||.+.+
T Consensus 61 ~------~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 61 S------FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp H------HHHHSCCTTCSEEEECCS
T ss_pred H------HHHhCCcccCCEEEEecC
Confidence 5 45554 357899998876
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=97.53 E-value=2.9e-05 Score=69.76 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=58.1
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhccCCCCchhhhhhhhhhhhhhhcCce
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRGAS 131 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~~~~~~~~rl~~~~~~~~~~~~k~ 131 (298)
++..+..+++||++||||+++.++..++ ++.+||++.++.+++.............+..+..-.....
T Consensus 25 ~~~~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~~~~~~~~~~~~~~l~~g~~~~l 104 (329)
T 3tej_A 25 GCDVQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTL 104 (329)
T ss_dssp TC-CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCTTSSTTTTSSSEEEEECCSSCEE
T ss_pred CCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhcccccccccceeeeccCCCCCcE
Confidence 4455888999999999999998887655 5679999999999886433221111111111111112345
Q ss_pred eeecCCCCCCchh--HHHHHHHhCCCcceEEEecCC
Q psy14522 132 VFVTGGTGFMGKT--LTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 132 vLVTGatG~iG~~--l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+++.|+.|....+ ++..| ..+ ..|+++...
T Consensus 105 ~~lhg~~~~~~~~~~l~~~L-~~~---~~v~~~d~~ 136 (329)
T 3tej_A 105 FCFHPASGFAWQFSVLSRYL-DPQ---WSIIGIQSP 136 (329)
T ss_dssp EEECCTTSCCGGGGGGGGTS-CTT---CEEEEECCC
T ss_pred EEEeCCcccchHHHHHHHhc-CCC---CeEEEeeCC
Confidence 6777776654432 23333 222 347777654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00024 Score=56.40 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=56.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+++|+|.|+ |.+|+++++.|.+.|++ |+++.|... +..+++.... ..++.++.+|.++
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~---V~vid~~~~--~~~~~~~~~~---------------~~~~~~i~gd~~~ 60 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSND 60 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTTS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCCh--HHHHHHHHhh---------------cCCCeEEEcCCCC
Confidence 4568999996 99999999999999877 888887531 1111222111 1467899999987
Q ss_pred CCCCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 208 PGLGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 208 ~~~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
+. .+... +++.|.||-+.+.
T Consensus 61 ~~------~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 61 SS------VLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp HH------HHHHHTTTTCSEEEECSSC
T ss_pred HH------HHHHcChhhCCEEEEecCC
Confidence 65 56665 6789999988753
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00021 Score=67.56 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=55.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++|+|+|+ |++|+.+++.|++.+ . .+|++.+|... +.++... . .++..+.+|+.
T Consensus 21 l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~~------ka~~la~------------~--~~~~~~~~D~~ 77 (467)
T 2axq_A 21 HMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTLA------NAQALAK------------P--SGSKAISLDVT 77 (467)
T ss_dssp --CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSHH------HHHHHHG------------G--GTCEEEECCTT
T ss_pred CCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCHH------HHHHHHH------------h--cCCcEEEEecC
Confidence 45789999997 999999999999873 1 24888888632 2211111 0 24566778887
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
+.. .+..+++++|+|||+++..
T Consensus 78 d~~------~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 78 DDS------ALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp CHH------HHHHHHHTSSEEEECSCGG
T ss_pred CHH------HHHHHHcCCCEEEECCchh
Confidence 654 6777778999999999864
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=6.3e-05 Score=67.47 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=55.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+||||+||+|++++..|+..|. +..+.++++... .++++.... .+.+ . .+.....+.+...+ .
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~~-dl~~-~---~~~~~~~~~i~~~~---d- 66 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHS----INKLEGLRE-DIYD-A---LAGTRSDANIYVES---D- 66 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGG----HHHHHHHHH-HHHH-H---HTTSCCCCEEEEEE---T-
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCc----hhhhHHHHH-HHHH-h---HHhcCCCeEEEeCC---c-
Confidence 4799999999999999999998764 345666766211 111211000 0000 0 00010123333221 0
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG 250 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g 250 (298)
.+...++++|+|||+|+... .......++..|+.+
T Consensus 67 ------~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i 102 (313)
T 1hye_A 67 ------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKI 102 (313)
T ss_dssp ------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHH
T ss_pred ------chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHH
Confidence 12334679999999999653 233444556666655
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00074 Score=60.12 Aligned_cols=97 Identities=16% Similarity=0.047 Sum_probs=55.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++|+||||+|++|.+++..|+..+. +.++.++++... .++++.... .+.+.. . ....+.+...| .
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~~-dl~~~~----~-~~~~~~v~~~~---~- 65 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDK----EDDTVGQAA-DTNHGI----A-YDSNTRVRQGG---Y- 65 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGG----HHHHHHHHH-HHHHHH----T-TTCCCEEEECC---G-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCC----hhhHHHHHH-HHHHHH----h-hCCCcEEEeCC---H-
Confidence 5799999999999999999988864 345777776111 112211110 010100 0 11233433322 1
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG 250 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g 250 (298)
..++++|+|||+|+... ......+++..|+.+
T Consensus 66 ---------~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i 98 (303)
T 1o6z_A 66 ---------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPI 98 (303)
T ss_dssp ---------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHH
T ss_pred ---------HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 23578999999999653 233444556666655
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00054 Score=52.86 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=50.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++|+|+|+ |++|..+++.|.+.|++ |++++|+.. +.+..... ..+.++.+|..++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~---v~~~d~~~~------~~~~~~~~--------------~~~~~~~~d~~~~ 59 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDKD------ICKKASAE--------------IDALVINGDCTKI 59 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH--------------CSSEEEESCTTSH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHHh--------------cCcEEEEcCCCCH
Confidence 478999987 99999999999998865 888887532 22111110 2456677887654
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
. .+... ..++|+||++...
T Consensus 60 ~------~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 60 K------TLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp H------HHHHTTTTTCSEEEECCSC
T ss_pred H------HHHHcCcccCCEEEEeeCC
Confidence 3 34433 5689999999764
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00033 Score=63.96 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=54.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
+.|+|+|.|| |++|+.+++.|.+. ++ |.+.+|+.. ++++. .+.+..+..|+.+
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~~-~~---v~~~~~~~~------~~~~~----------------~~~~~~~~~d~~d 67 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FD---VYIGDVNNE------NLEKV----------------KEFATPLKVDASN 67 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SE---EEEEESCHH------HHHHH----------------TTTSEEEECCTTC
T ss_pred CccEEEEECC-CHHHHHHHHHHhcC-CC---eEEEEcCHH------HHHHH----------------hccCCcEEEecCC
Confidence 4678999998 99999999988665 55 777777521 22211 1456677889887
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
.+ .+..+++++|+||++++..
T Consensus 68 ~~------~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 68 FD------KLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp HH------HHHHHHTTCSEEEECCCGG
T ss_pred HH------HHHHHHhCCCEEEEecCCc
Confidence 65 8889999999999998764
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00056 Score=54.38 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=52.9
Q ss_pred hhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 123 ~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+|....+++|+|.|+ |.+|..+++.|.+.|.+ |+++.|+..... . ... .....++.
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~---V~vid~~~~~~~---~---------------~~~--~~g~~~~~ 68 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHS---VVVVDKNEYAFH---R---------------LNS--EFSGFTVV 68 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCGGGGG---G---------------SCT--TCCSEEEE
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHHHHH---H---------------HHh--cCCCcEEE
Confidence 345566889999996 99999999999999865 888888643211 0 000 12455677
Q ss_pred cCCCCCCCCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 203 GDVSLPGLGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
+|..++. .+... ..++|+||.+.+.
T Consensus 69 ~d~~~~~------~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 69 GDAAEFE------TLKECGMEKADMVFAFTND 94 (155)
T ss_dssp SCTTSHH------HHHTTTGGGCSEEEECSSC
T ss_pred ecCCCHH------HHHHcCcccCCEEEEEeCC
Confidence 7766533 44443 5679999998874
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00056 Score=56.50 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=30.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++|+||||+|.+|..+++.+...|.+ |++++|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~ 72 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGS 72 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCE---EEEEeCC
Confidence 5789999999999999999999988855 8888875
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=8.7e-05 Score=72.63 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=8.9
Q ss_pred hhcCCCCchhcccCCCC----CCCc-------------ccCCCCCCCCccccccCCeEEEecCcccchHHHHHHH-----
Q psy14522 34 TAQYPIDPFELLGENSF----GKPR-------------VVPPDEVGSPIQEFYRGASVFVTGGTGFMGKTLTEKL----- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~----~~~~-------------~~~~~~~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l----- 91 (298)
.+..|.+..+|++++.. +.|. +..--...+++..+..++|||.+|||||++.+|+.++
T Consensus 491 v~~lP~t~~GKidR~~L~~~~~~~~~~~~~~~~~~e~~l~~iw~~vL~~~~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~ 570 (620)
T 4dg8_A 491 VEALPLTAHGKLDRAALLRRLEEPLERCASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGA 570 (620)
T ss_dssp CSSCCCC----CCHHHHHHHTCSCC-------------------------------------------------------
T ss_pred ECcCCCCcccCHhHHHHhhccccccccccCCCCHHHHHHHHHHHHHhCCCCCCCCCChhhccCcHHHHHHHHHHHHhhCC
Confidence 34557777777776654 2221 1122233556788999999999999999998776543
Q ss_pred --------HhhCCChHHhHHhhccC
Q psy14522 92 --------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 92 --------l~~~ptv~~l~~~i~~~ 108 (298)
++++|||++|+.++++.
T Consensus 571 ~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 571 GANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp -------------------------
T ss_pred CCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 56789999999988863
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=57.58 Aligned_cols=85 Identities=8% Similarity=0.035 Sum_probs=53.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++++|+|+ |.+|+.++..|.+.|. .+|++.+|.....+..+.+.+.+... ....+...++.
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~~~a~~la~~~~~~-------------~~~~~~~~~~~ 215 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFYANAEKTVEKINSK-------------TDCKAQLFDIE 215 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHHHHH-------------SSCEEEEEETT
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchHHHHHHHHHHhhhh-------------cCCceEEeccc
Confidence 46899999997 8999999999999984 35888999743222233333222210 11222233443
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+. +.+...+.+.|+||++-..
T Consensus 216 ~~------~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 216 DH------EQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp CH------HHHHHHHHTCSEEEECSST
T ss_pred hH------HHHHhhhcCCCEEEECccC
Confidence 32 2466667789999998754
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00042 Score=49.40 Aligned_cols=43 Identities=9% Similarity=-0.036 Sum_probs=35.0
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVR 106 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~ 106 (298)
+..++.++++||.+|+||+.+..+..++ ++.+||+..++.++.
T Consensus 30 ~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~ 84 (88)
T 2afd_A 30 DPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLG 84 (88)
T ss_dssp CGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHH
T ss_pred CHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHH
Confidence 4467889999999999999998887665 456789988887765
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00049 Score=72.90 Aligned_cols=123 Identities=11% Similarity=0.076 Sum_probs=77.6
Q ss_pred hhcCCCCchhcccCCCCCCCcccCCCCC------------------CCCccccccCCeEEEecCcccchHHHHHHH----
Q psy14522 34 TAQYPIDPFELLGENSFGKPRVVPPDEV------------------GSPIQEFYRGASVFVTGGTGFMGKTLTEKL---- 91 (298)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l---- 91 (298)
.+..|.++.+|++++..++|........ .+++..+..+++||++|||||++.+|..++
T Consensus 938 l~~lP~t~~GKidR~~L~~~~~~~~~~~~~~p~~~~e~~l~~~~~~vL~~~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~ 1017 (1304)
T 2vsq_A 938 LDELPLTTNGKVNKRLLPKPDQDQLAEEWIGPRNEMEETIAQIWSEVLGRKQIGIHDDFFALGGHALKAMTAASRIKKEL 1017 (1304)
T ss_dssp ESCCCCCSSCSSCCSCCCCCCGGGGCCCCCCCSSHHHHHHHHHHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHSSSTT
T ss_pred ecccCCCCCcccCHhhcCCcchhhhcccccCCCChHHHHHHHHHHHHcCCCccCCCCCHHHhCCChHHHHHHHHHHHHHh
Confidence 3556999999999999988764321110 234677999999999999999999998776
Q ss_pred --------HhhCCChHHhHHhhccCCCCchhhhhhhhhhhhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 92 --------LRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 92 --------l~~~ptv~~l~~~i~~~~~~~~~~rl~~~~~~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
++++|||+.|+.+++........ .+..+........+++.++.|+...+ ..|...-. ...|+.+.
T Consensus 1018 g~~l~~~~~~~~~ti~~la~~~~~~~~~~~~----~~~~~~~~~~~~L~~l~~~~g~~~~y--~~la~~L~-~~~v~~l~ 1090 (1304)
T 2vsq_A 1018 GIDLPVKLLFEAPTIAGISAYLKNGGSDGLQ----DVTIMNQDQEQIIFAFPPVLGYGLMY--QNLSSRLP-SYKLCAFD 1090 (1304)
T ss_dssp SCCCCSSCTTTCCSHHHHHHHHHHTTSSSTT----TSEEECTTSCCEEECCCCTTCBGGGG--HHHHTTCC-SCEEEECB
T ss_pred CCCCCHHHHHhCCCHHHHHHHHHhcCCCccc----cccccccccCCcceeecccccchHHH--HHHHhccc-ccceEeec
Confidence 56789999999988753222110 01111111122345667777766555 34444312 23466554
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00048 Score=49.99 Aligned_cols=44 Identities=11% Similarity=0.023 Sum_probs=36.2
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhc
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVR 106 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~ 106 (298)
.+..++.++++||.+|+||+++..+..++ ++.+||+..++.++.
T Consensus 36 ~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~ 91 (95)
T 2ju1_A 36 DDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLD 91 (95)
T ss_dssp CCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHH
T ss_pred CChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHH
Confidence 34567889999999999999999887766 456899999887765
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0019 Score=57.85 Aligned_cols=36 Identities=28% Similarity=0.289 Sum_probs=30.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|+||+|++|..++..|+..|. +..|.++++..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc
Confidence 4799999999999999999988763 45699998864
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00063 Score=61.45 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=28.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcce-----EEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLER-----VYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~-----V~~l~R~ 165 (298)
.++|.||||+|++|++++..|+..+. +.+ +.++++.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~ 43 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDIT 43 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCG
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCC
Confidence 46899999999999999999988753 233 7777764
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0041 Score=52.18 Aligned_cols=73 Identities=18% Similarity=0.154 Sum_probs=52.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|+|+ |.+|+++++.|.+.|++ |+++.+++. +.+..... .++.++.+|.+++.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~---v~vid~~~~------~~~~l~~~--------------~~~~~i~gd~~~~~ 56 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYG---VVIINKDRE------LCEEFAKK--------------LKATIIHGDGSHKE 56 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHHH--------------SSSEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHHH--------------cCCeEEEcCCCCHH
Confidence 57999996 99999999999999877 888887532 22221110 35678899998765
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+... ..++|+||-+.+
T Consensus 57 ------~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 57 ------ILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp ------HHHHHTCCTTCEEEECCS
T ss_pred ------HHHhcCcccCCEEEEecC
Confidence 55554 567898887654
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00062 Score=66.37 Aligned_cols=43 Identities=14% Similarity=0.182 Sum_probs=36.9
Q ss_pred ccccccCCeEEEecCcccchHHHHHHH-----------HhhCCChHHhHHhhcc
Q psy14522 65 IQEFYRGASVFVTGGTGFMGKTLTEKL-----------LRACPHLERVYLLVRP 107 (298)
Q Consensus 65 ~~~~~~~~~ff~~Gg~sl~~~~l~~~l-----------l~~~ptv~~l~~~i~~ 107 (298)
..++..++|||.+|||||++++|..++ ++++|||+.|+.++++
T Consensus 561 ~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~pti~~la~~l~~ 614 (617)
T 3rg2_A 561 SDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSR 614 (617)
T ss_dssp TCCCCTTSCGGGGTCCHHHHHHHHHHHHTTSTTCCHHHHHHSCCHHHHHHHHCC
T ss_pred CCCCCCCCChhhcCccHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHh
Confidence 456788999999999999999987665 5689999999988875
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0037 Score=55.76 Aligned_cols=101 Identities=10% Similarity=0.080 Sum_probs=59.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+||+|.+|..+++.+...|.+ |++++|+.. +++.... + ... .. .|..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---V~~~~~~~~------~~~~~~~------~-------g~~-~~--~~~~ 193 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAK---LIGTVGTAQ------KAQSALK------A-------GAW-QV--INYR 193 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCE---EEEEESSHH------HHHHHHH------H-------TCS-EE--EETT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCHH------HHHHHHH------c-------CCC-EE--EECC
Confidence 35789999999999999999999999865 888887532 2221111 0 011 11 3444
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHHhh-ccccceEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~~ 259 (298)
+.++ .+.+.+... ++|++|+++|. ..+...++ ..-.|+++.+++..
T Consensus 194 ~~~~---~~~~~~~~~~~~~D~vi~~~g~----~~~~~~~~~l~~~G~iv~~g~~~ 242 (327)
T 1qor_A 194 EEDL---VERLKEITGGKKVRVVYDSVGR----DTWERSLDCLQRRGLMVSFGNSS 242 (327)
T ss_dssp TSCH---HHHHHHHTTTCCEEEEEECSCG----GGHHHHHHTEEEEEEEEECCCTT
T ss_pred CccH---HHHHHHHhCCCCceEEEECCch----HHHHHHHHHhcCCCEEEEEecCC
Confidence 4331 123333332 59999999982 22332222 22234899888753
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0047 Score=50.19 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=53.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
..+++|+|.| .|.+|..+++.|.+. |++ |++++|++. +.+.... ..+.++.+|.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~---V~vid~~~~------~~~~~~~---------------~g~~~~~gd~ 91 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKI---SLGIEIREE------AAQQHRS---------------EGRNVISGDA 91 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSC---EEEEESCHH------HHHHHHH---------------TTCCEEECCT
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCe---EEEEECCHH------HHHHHHH---------------CCCCEEEcCC
Confidence 4467899998 599999999999998 887 888887632 2222111 3466778888
Q ss_pred CCCCCCCCHHHHHHH--hcCccEEEEcCcc
Q psy14522 206 SLPGLGLSAADRAVL--RRNVTVVFHGAAT 233 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l--~~~vd~Vih~A~~ 233 (298)
++++ .+..+ .+++|+||.+.+.
T Consensus 92 ~~~~------~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 92 TDPD------FWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TCHH------HHHTBCSCCCCCEEEECCSS
T ss_pred CCHH------HHHhccCCCCCCEEEEeCCC
Confidence 7654 45555 5689999987653
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0048 Score=55.23 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=60.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+||+|.+|..+++.+...|.+ |++++|+.. +++.... + ... . ..|..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---Vi~~~~~~~------~~~~~~~------~-------g~~-~--~~d~~ 198 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGAT---VIGTVSTEE------KAETARK------L-------GCH-H--TINYS 198 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH------H-------TCS-E--EEETT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------c-------CCC-E--EEECC
Confidence 35789999999999999999999888754 888888631 2221111 0 011 1 12444
Q ss_pred CCCCCCCHHHHHHHh--cCccEEEEcCcccCccccHHHHhh-ccccceEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLR--RNVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~~ 259 (298)
+.++ .+.+.+.. .++|++|+++|. ......++ ..-.|+++.+++..
T Consensus 199 ~~~~---~~~i~~~~~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g~~~ 247 (333)
T 1wly_A 199 TQDF---AEVVREITGGKGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYGHAS 247 (333)
T ss_dssp TSCH---HHHHHHHHTTCCEEEEEECSCT----TTHHHHHHTEEEEEEEEECCCTT
T ss_pred CHHH---HHHHHHHhCCCCCeEEEECCcH----HHHHHHHHhhccCCEEEEEecCC
Confidence 4331 12333333 269999999985 22222222 22234888887653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.011 Score=45.95 Aligned_cols=74 Identities=20% Similarity=0.225 Sum_probs=53.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|+|.|. |.+|..+++.|.+.|++ |+++.+++. +++.... ..+.++.+|.+++
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~---v~vid~~~~------~~~~~~~---------------~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIP---LVVIETSRT------RVDELRE---------------RGVRAVLGNAANE 61 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH---------------TTCEEEESCTTSH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHH---------------cCCCEEECCCCCH
Confidence 457899996 99999999999999877 888888632 2222111 4677899999886
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCcc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAAT 233 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~~ 233 (298)
+ .+..+ ..+.|.||-+...
T Consensus 62 ~------~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 62 E------IMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp H------HHHHTTGGGCSEEEECCSC
T ss_pred H------HHHhcCcccCCEEEEECCC
Confidence 5 45443 4578998877653
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0048 Score=55.63 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=32.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+++|+|+|++|.+|..+++.+...|.+ |+++.|+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---V~~~~~~~~ 205 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYR---VLGIDGGEG 205 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCc---EEEEcCCHH
Confidence 35789999999999999999998888754 888887643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0093 Score=53.21 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=32.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+++++|+|+ |..|+.++..|.+.|. .+|++..|...
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~ 183 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDD 183 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCc
Confidence 46889999997 8999999999999984 46999999743
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0044 Score=55.45 Aligned_cols=101 Identities=11% Similarity=0.117 Sum_probs=59.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+||||+|.+|..+++.+...|.+ |++++|+.. +++.. +. .... ...|.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~~~------~~~~~-~~------------~g~~---~~~d~~ 198 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGSDE------KIAYL-KQ------------IGFD---AAFNYK 198 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHH-HH------------TTCS---EEEETT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHH-Hh------------cCCc---EEEecC
Confidence 35789999999999999999999888865 888887521 22221 10 0011 123555
Q ss_pred C-CCCCCCHHHHHHHh-cCccEEEEcCcccCccccHHHHhh-ccccceEEEEeCCc
Q psy14522 207 L-PGLGLSAADRAVLR-RNVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~-~~~gl~~~~~~~l~-~~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~~ 259 (298)
+ .++ .+.+..+. .++|++|+++|.. .....++ ..-.|+++.++...
T Consensus 199 ~~~~~---~~~~~~~~~~~~d~vi~~~g~~----~~~~~~~~l~~~G~~v~~g~~~ 247 (333)
T 1v3u_A 199 TVNSL---EEALKKASPDGYDCYFDNVGGE----FLNTVLSQMKDFGKIAICGAIS 247 (333)
T ss_dssp SCSCH---HHHHHHHCTTCEEEEEESSCHH----HHHHHHTTEEEEEEEEECCCCC
T ss_pred CHHHH---HHHHHHHhCCCCeEEEECCChH----HHHHHHHHHhcCCEEEEEeccc
Confidence 4 221 12233332 3699999999852 1222222 22234888887653
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0024 Score=46.41 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=36.0
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++++||.+|+||+.+..+..++ ++.+||+..++.++..
T Consensus 36 ~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~ 92 (99)
T 2liu_A 36 TEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQ 92 (99)
T ss_dssp SCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHH
T ss_pred cCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence 34577899999999999999998876554 4568999988877653
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.012 Score=52.42 Aligned_cols=38 Identities=42% Similarity=0.541 Sum_probs=30.8
Q ss_pred hcCce-eeec-CCC-----------------CCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGAS-VFVT-GGT-----------------GFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~-vLVT-Gat-----------------G~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+++ |||| |+| |-.|.++++.++..|++ |+.+.|..+
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~---V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG---VLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE---EEEEecCCC
Confidence 56777 9998 667 88999999999999987 777776543
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0024 Score=45.60 Aligned_cols=44 Identities=7% Similarity=0.161 Sum_probs=35.2
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH--------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL--------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l--------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++||.+|+||+.+..+..++ ++.+||+..++.++..
T Consensus 27 ~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 27 ALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 4567889999999999999998876554 4457888888877765
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0019 Score=61.27 Aligned_cols=44 Identities=11% Similarity=0.234 Sum_probs=37.0
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
++.+++.+++||.+||||+.+++++.++ ++.+||+..++.++..
T Consensus 24 ~~~~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~ 79 (520)
T 2jgp_A 24 NVPQVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEE 79 (520)
T ss_dssp TCSCCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHH
T ss_pred CCCCCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHh
Confidence 3457889999999999999999987665 4568999999988765
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.023 Score=49.97 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=31.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|.+.|. .+|++.+|..
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 46899999998 8999999999999974 4588888874
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0083 Score=54.75 Aligned_cols=103 Identities=18% Similarity=0.138 Sum_probs=58.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+|+ |.+|..+++.+...|.+ |++++|+.. +++..... .... +.+|..
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~---V~~~d~~~~------~~~~~~~~------------~g~~---~~~~~~ 218 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQ---VTILDVNHK------RLQYLDDV------------FGGR---VITLTA 218 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------TTTS---EEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEECCHH------HHHHHHHh------------cCce---EEEecC
Confidence 46789999999 99999999999999865 888888632 22211110 0112 223443
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc-c---ccHHHHhhccccceEEEEeCCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF-D---ENIKVAIAINIFGSFVHVSTAYT 260 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-~---~~~~~~~~~Nv~g~~v~iSS~~~ 260 (298)
+. ..+.+++.++|+||++++.... . -....+....-.|.+|.+|+..+
T Consensus 219 ~~------~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~g 270 (369)
T 2eez_A 219 TE------ANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQG 270 (369)
T ss_dssp CH------HHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC----
T ss_pred CH------HHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCC
Confidence 33 2567777889999999985421 0 01111111111228899988643
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0068 Score=54.81 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=31.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+||+|.+|..+++.+...|.+ |++++|+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~---Vi~~~~~ 204 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLK---ILGTAGT 204 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCC
Confidence 35789999999999999999998888754 8888875
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.011 Score=53.35 Aligned_cols=100 Identities=11% Similarity=0.111 Sum_probs=59.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+||+|.+|..+++.+...|.+ |++++|+.. +++.... + ... . ..|..
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---Vi~~~~~~~------~~~~~~~------~-------g~~-~--~~~~~ 215 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAI---PLVTAGSQK------KLQMAEK------L-------GAA-A--GFNYK 215 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------H-------TCS-E--EEETT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeCCHH------HHHHHHH------c-------CCc-E--EEecC
Confidence 35789999999999999999999888754 888887532 2221110 0 011 1 23444
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHHhh-ccccceEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~ 258 (298)
+.++ .+.+.+... ++|++|+++|... ....++ ..-.|+++.++..
T Consensus 216 ~~~~---~~~~~~~~~~~~~d~vi~~~G~~~----~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 216 KEDF---SEATLKFTKGAGVNLILDCIGGSY----WEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp TSCH---HHHHHHHTTTSCEEEEEESSCGGG----HHHHHHHEEEEEEEEECCCT
T ss_pred ChHH---HHHHHHHhcCCCceEEEECCCchH----HHHHHHhccCCCEEEEEecc
Confidence 4331 123333332 6999999998532 222211 2223488888764
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0078 Score=54.38 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=30.6
Q ss_pred cC--ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RG--ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~--k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+ ++|+|+||+|.+|..+++.+...|. .+|++++|+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 46 8999999999999999999888875 148888875
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0064 Score=55.00 Aligned_cols=40 Identities=10% Similarity=0.208 Sum_probs=33.4
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.|+.+++|.|+|++|++|+.++..++..|. ..+|.++++.
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 466788999999999999999999999874 2358888874
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.018 Score=51.79 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=31.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|+||+|.+|...++.+...|.+ |++++++.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~---Vi~~~~~~ 194 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAK---VIAVVNRT 194 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 35789999999999999999888888754 88888764
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.021 Score=51.20 Aligned_cols=101 Identities=11% Similarity=0.045 Sum_probs=59.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+|++|.+|..+++.+...|.+ |++++|+.. +++.... + ... .. .|..
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~---Vi~~~~~~~------~~~~~~~------~-------ga~-~~--~d~~ 219 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGAR---VIATAGSED------KLRRAKA------L-------GAD-ET--VNYT 219 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH------H-------TCS-EE--EETT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHh------c-------CCC-EE--EcCC
Confidence 35789999999999999999988888754 888887532 2221111 0 011 11 3554
Q ss_pred CCCCCCCHHHHHHHh--cCccEEEEcCcccCccccHHHHhh-ccccceEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLR--RNVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~--~~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~~ 259 (298)
+.++ .+.+.++. .++|++|+++| .. .+...++ ..-.|+++.+++..
T Consensus 220 ~~~~---~~~~~~~~~~~~~d~vi~~~g-~~---~~~~~~~~l~~~G~~v~~g~~~ 268 (343)
T 2eih_A 220 HPDW---PKEVRRLTGGKGADKVVDHTG-AL---YFEGVIKATANGGRIAIAGASS 268 (343)
T ss_dssp STTH---HHHHHHHTTTTCEEEEEESSC-SS---SHHHHHHHEEEEEEEEESSCCC
T ss_pred cccH---HHHHHHHhCCCCceEEEECCC-HH---HHHHHHHhhccCCEEEEEecCC
Confidence 4331 12344443 26999999998 32 2222221 22234888887753
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0063 Score=42.18 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=35.3
Q ss_pred CccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++|| .+|+||+.+..+..++ ++.+||+..++.++..
T Consensus 19 ~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 75 (78)
T 1l0i_A 19 KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYING 75 (78)
T ss_dssp CGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred CHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 456788999998 9999999998876555 4567899999887764
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0095 Score=51.31 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=31.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.|+ |.+|+++++.|...| +.+|.++++..
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~ 65 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDT 65 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCB
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCC
Confidence 55789999995 889999999999998 55788888874
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.042 Score=43.64 Aligned_cols=77 Identities=17% Similarity=0.170 Sum_probs=44.3
Q ss_pred CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCCCCHHHH
Q psy14522 138 TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLGLSAADR 217 (298)
Q Consensus 138 tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~gl~~~~~ 217 (298)
+|.++...++.|.+.|.+ |++..|............+... ....+...+.+|++++. .+.+
T Consensus 25 s~~p~~a~a~~La~~Ga~---vvi~~r~~~e~~~~~~~~~~~~------------~~G~~~~~i~~Dv~~~~----~~~v 85 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVD---VVINLMPDSSKDAHPDEGKLVT------------QAGMDYVYIPVDWQNPK----VEDV 85 (157)
T ss_dssp EBCCCHHHHHHHHHTTCC---EEEECSCTTSTTSCTTHHHHHH------------HTTCEEEECCCCTTSCC----HHHH
T ss_pred cCCCCHHHHHHHHHcCCC---EEEECCCcccccccccHHHHHH------------HcCCeEEEecCCCCCCC----HHHH
Confidence 367899999999999976 5555554332111101111111 11235667788998872 1233
Q ss_pred HHH-------hcCccEEEEcCccc
Q psy14522 218 AVL-------RRNVTVVFHGAATV 234 (298)
Q Consensus 218 ~~l-------~~~vd~Vih~A~~~ 234 (298)
..+ ..+ |++|||||..
T Consensus 86 ~~~~~~i~~~~G~-dVLVnnAgg~ 108 (157)
T 3gxh_A 86 EAFFAAMDQHKGK-DVLVHCLANY 108 (157)
T ss_dssp HHHHHHHHHTTTS-CEEEECSBSH
T ss_pred HHHHHHHHhcCCC-CEEEECCCCC
Confidence 333 235 9999999863
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.017 Score=50.20 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=30.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|++.|.+ |++.+|..
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~---V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCA---VTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCE---EEEEECCH
Confidence 46789999998 78999999999999844 88888863
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=95.28 E-value=0.011 Score=52.80 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=30.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+|++|.+|...++.+...|.+ |+++.|+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~ 183 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCR---VVGIAGG 183 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 45889999999999999999888888754 8888875
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.0084 Score=53.79 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=30.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+||+|.+|..+++.+...|.+ |++..|+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~---V~~~~~~ 189 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCY---VVGSAGS 189 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 35789999999999999999988888754 8888875
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0074 Score=50.55 Aligned_cols=47 Identities=9% Similarity=0.120 Sum_probs=39.2
Q ss_pred CCCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhccC
Q psy14522 62 GSPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 62 ~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~ 108 (298)
+.+..++.++++||.+|+||+++..+..++ ++.+||+..++.++...
T Consensus 40 ~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~ 98 (212)
T 2l22_A 40 YCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQ 98 (212)
T ss_dssp TCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTT
T ss_pred CcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 345577899999999999999999887766 56789999999888753
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.01 Score=49.64 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=36.8
Q ss_pred CccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++..+++||.+|+||+.+..+..++ ++++|||..++.++..
T Consensus 146 ~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~ 201 (212)
T 2l22_A 146 DPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDR 201 (212)
T ss_dssp CSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHH
T ss_pred ChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHH
Confidence 3478889999999999999998887655 5678999999988764
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.025 Score=50.26 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=59.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+||+|.+|...++.+...|.+ |++.+++.. +++..... ..-.. .|..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~------~~~~~~~~--------------Ga~~~--~~~~ 193 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAK---LIGTVSSPE------KAAHAKAL--------------GAWET--IDYS 193 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESSHH------HHHHHHHH--------------TCSEE--EETT
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHc--------------CCCEE--EeCC
Confidence 35789999999999999999988888854 888887532 22211110 11112 2333
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHHhh-ccccceEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~~ 259 (298)
+.++ .+.+.++.. ++|++|+++|.. .+...++ ..-.|+++.++...
T Consensus 194 ~~~~---~~~~~~~~~~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 194 HEDV---AKRVLELTDGKKCPVVYDGVGQD----TWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp TSCH---HHHHHHHTTTCCEEEEEESSCGG----GHHHHHTTEEEEEEEEECCCTT
T ss_pred CccH---HHHHHHHhCCCCceEEEECCChH----HHHHHHHHhcCCCEEEEEecCC
Confidence 3331 123444433 699999999852 2222221 22234888887653
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.025 Score=50.95 Aligned_cols=37 Identities=27% Similarity=0.331 Sum_probs=31.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|+||+|.+|...++.+...|.+ |++.+|+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 202 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAE---VYATAGST 202 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 35789999999999999999988888754 88888763
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=94.87 E-value=0.0076 Score=41.45 Aligned_cols=45 Identities=9% Similarity=-0.018 Sum_probs=35.7
Q ss_pred CCccccccCCeE-EEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASV-FVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~f-f~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++++| +.+|+||+.+..+...+ ++.+||+..++.++..
T Consensus 16 ~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~ 73 (77)
T 2ehs_A 16 VEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKE 73 (77)
T ss_dssp CCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHH
T ss_pred CChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHH
Confidence 345678889999 99999999998876655 4568899998877654
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.02 Score=54.72 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=27.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+++++|||| |++|++++..|++.|.+ |++..|.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~---V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAK---VVIANRT 396 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESS
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECC
Confidence 45789999999 79999999999999865 7888886
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.048 Score=48.76 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=59.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+|++|.+|...++.+...|.+ |++++++....+ .+.+ + ... .. .|..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~---~~~~-l---------------ga~-~~--~~~~ 197 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFR---LIAVTRNNKHTE---ELLR-L---------------GAA-YV--IDTS 197 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESSSTTHH---HHHH-H---------------TCS-EE--EETT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCE---EEEEeCCHHHHH---HHHh-C---------------CCc-EE--EeCC
Confidence 45789999999999999999888888754 888888654321 1111 0 011 12 2333
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHHhhccccceEEEEeCCc
Q psy14522 207 LPGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVAIAINIFGSFVHVSTAY 259 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~~~~Nv~g~~v~iSS~~ 259 (298)
+.++ .+.+.++.. ++|++|+++|...... .+....-.|+++.++...
T Consensus 198 ~~~~---~~~~~~~~~~~g~Dvvid~~g~~~~~~---~~~~l~~~G~iv~~G~~~ 246 (340)
T 3gms_A 198 TAPL---YETVMELTNGIGADAAIDSIGGPDGNE---LAFSLRPNGHFLTIGLLS 246 (340)
T ss_dssp TSCH---HHHHHHHTTTSCEEEEEESSCHHHHHH---HHHTEEEEEEEEECCCTT
T ss_pred cccH---HHHHHHHhCCCCCcEEEECCCChhHHH---HHHHhcCCCEEEEEeecC
Confidence 3321 123344433 6999999998533211 111222234888887653
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=94.64 E-value=0.027 Score=48.48 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=30.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++|+|.|+ |.+|+++++.|...| +.++.++++.
T Consensus 25 ~l~~~~VlvvG~-GglG~~va~~La~~G--vg~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGL-GGLGTPAALYLAGAG--VGTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECC-STTHHHHHHHHHHTT--CSEEEEECCC
T ss_pred HHhcCcEEEEcc-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 356789999997 779999999999998 5678887654
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.022 Score=51.15 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~ 165 (298)
..+++|+|+|++|.+|..+++.+... |.+ |++++++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---Vi~~~~~ 205 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGAT---IIGVDVR 205 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCE---EEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCe---EEEEcCC
Confidence 35789999999999999999998888 865 8888775
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=94.45 E-value=0.03 Score=50.01 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=30.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+||+|.+|...++.+...|.+ |++++++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~ 182 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAH---TIAVAST 182 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 45789999999999999999888888754 8888875
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.041 Score=49.81 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=30.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+||+|.+|...++.+...|.+ |++++|+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~---Vi~~~~~ 197 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCH---VIGTCSS 197 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEECC
Confidence 35789999999999999999888888754 8888875
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.026 Score=39.41 Aligned_cols=41 Identities=5% Similarity=0.016 Sum_probs=33.0
Q ss_pred ccccCCeEEEecCcccchHHHHHHHH------------hhCCChHHhHHhhcc
Q psy14522 67 EFYRGASVFVTGGTGFMGKTLTEKLL------------RACPHLERVYLLVRP 107 (298)
Q Consensus 67 ~~~~~~~ff~~Gg~sl~~~~l~~~ll------------~~~ptv~~l~~~i~~ 107 (298)
++.++++|+.+|+||+.+..+...+- ..+||+..++.++..
T Consensus 24 ~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 76 (82)
T 2ava_A 24 VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEG 76 (82)
T ss_dssp CCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHH
T ss_pred ccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHH
Confidence 68899999999999999998877663 346788888877653
|
| >2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* | Back alignment and structure |
|---|
Probab=94.23 E-value=0.016 Score=40.37 Aligned_cols=45 Identities=4% Similarity=-0.040 Sum_probs=34.8
Q ss_pred CCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++++|| .+|+||+.+..+...+ +..+||+..++.++..
T Consensus 22 ~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (82)
T 2cnr_A 22 IPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILD 79 (82)
T ss_dssp CCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHH
T ss_pred CCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 3445788899997 9999999998887766 3457888888877654
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.033 Score=50.44 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=29.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+++|+|+|+ |.+|...++.+...|.+ |++++++.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLE---VWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCE---EEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEeCCc
Confidence 889999999 99999999988888754 88888864
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=94.04 E-value=0.059 Score=47.48 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=32.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++.+|+|.|+ |.+|+.++..|...| |.++.+++++.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCB
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCc
Confidence 456789999985 889999999999998 67888888764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.077 Score=47.59 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=29.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+++++|+||+|.+|...++.+...|.+ |++.+++.
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~---Vi~~~~~~ 199 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFR---PIVTVRRD 199 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESCG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 479999999999999999888888754 88888764
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=93.92 E-value=0.073 Score=47.56 Aligned_cols=100 Identities=16% Similarity=0.002 Sum_probs=57.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+++|+|+|+ |.+|...++.+...|. +|++++|+.. +++.... -.... ..|..
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~~~------~~~~~~~---------------lGa~~-~~d~~ 216 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIGDE------KLELAKE---------------LGADL-VVNPL 216 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSCHH------HHHHHHH---------------TTCSE-EECTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHHHH---------------CCCCE-EecCC
Confidence 35789999999 7799999988888875 4888887632 2221111 01111 13544
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhh-ccccceEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIA-INIFGSFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~-~Nv~g~~v~iSS~ 258 (298)
+.++ .+.+.++..++|++|++++... .+...++ ..-.|+++.+++.
T Consensus 217 ~~~~---~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 217 KEDA---AKFMKEKVGGVHAAVVTAVSKP---AFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp TSCH---HHHHHHHHSSEEEEEESSCCHH---HHHHHHHHEEEEEEEEECCCC
T ss_pred CccH---HHHHHHHhCCCCEEEECCCCHH---HHHHHHHHhhcCCEEEEeccc
Confidence 4331 1233333368999999998421 1222111 2223488887764
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=93.90 E-value=0.022 Score=51.36 Aligned_cols=35 Identities=34% Similarity=0.340 Sum_probs=27.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
.++|.|.||||.+|+.+++.|+++++....+..+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 36899999999999999999987665444455443
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=93.82 E-value=0.03 Score=39.17 Aligned_cols=42 Identities=7% Similarity=-0.069 Sum_probs=34.0
Q ss_pred ccc--cCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhccC
Q psy14522 67 EFY--RGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 67 ~~~--~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~ 108 (298)
++. ++++|+.+|+||+.+..+..++ +..+||+..++.++..+
T Consensus 24 ~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (83)
T 1or5_A 24 DLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 79 (83)
T ss_dssp CGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred ccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHH
Confidence 566 8889999999999998876655 45679999999887753
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=93.81 E-value=0.092 Score=48.58 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=53.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+++|+|.|. |.+|..+++.|.+.|.. |+++.+++. +++.... ..+.++.||.+++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~---vvvId~d~~------~v~~~~~---------------~g~~vi~GDat~~ 58 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVK---MVVLDHDPD------HIETLRK---------------FGMKVFYGDATRM 58 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCHH------HHHHHHH---------------TTCCCEESCTTCH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHh---------------CCCeEEEcCCCCH
Confidence 467999996 99999999999999877 888887632 2222211 3567889999987
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
+ .+..+ +.+.|+||-+..
T Consensus 59 ~------~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 59 D------LLESAGAAKAEVLINAID 77 (413)
T ss_dssp H------HHHHTTTTTCSEEEECCS
T ss_pred H------HHHhcCCCccCEEEECCC
Confidence 6 45555 567888887765
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.025 Score=51.25 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=22.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHh
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRA 152 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~ 152 (298)
.++|.|.||||.+|+.+++.|+++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~ 32 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH 32 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC
Confidence 468999999999999999999877
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.02 Score=39.81 Aligned_cols=44 Identities=5% Similarity=-0.038 Sum_probs=34.4
Q ss_pred CccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++|| .+|+||+.+..+...+ +..+||+..++.++..
T Consensus 22 ~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 78 (81)
T 2lol_A 22 DKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKE 78 (81)
T ss_dssp CTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHH
T ss_pred ChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 445788999997 9999999998887665 3457888888877653
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=0.029 Score=46.45 Aligned_cols=33 Identities=30% Similarity=0.373 Sum_probs=29.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
|+|+|+||+|++|+++++.|++.|++ |++++|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~---V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 47899999999999999999999865 8888886
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=93.60 E-value=0.062 Score=47.01 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=31.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+++++|+|+ |.+|+.++..|.+.|. .+|++.+|...
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46789999996 8999999999999985 24888888743
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=93.57 E-value=0.061 Score=48.70 Aligned_cols=40 Identities=18% Similarity=0.320 Sum_probs=33.4
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
...+++++|+|.|+ |.+|++++..|...| |.++.++++..
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~ 152 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQ 152 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCB
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCc
Confidence 34567889999996 889999999999998 67888888763
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.35 E-value=0.027 Score=38.89 Aligned_cols=44 Identities=9% Similarity=-0.008 Sum_probs=34.4
Q ss_pred CccccccCCeE-EEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASV-FVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~f-f~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++| +.+|+||+.+..+...+ +..+||+..++.++..
T Consensus 21 ~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 77 (80)
T 1x3o_A 21 EPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKA 77 (80)
T ss_dssp CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHH
T ss_pred CHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHH
Confidence 45678889999 99999999998876555 4567888888877653
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=93.25 E-value=0.047 Score=47.62 Aligned_cols=38 Identities=32% Similarity=0.447 Sum_probs=30.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.++|.|.|++|.+|+.+++.+.+. +++.-|-+++|..
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 3468999999999999999999877 5544455667763
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.23 E-value=0.052 Score=49.04 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=26.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
.++|.|.||||.+|+.+++.|.++ +++ +++.+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s 37 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTS 37 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEEC
Confidence 368999999999999999999876 443 3555544
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.13 E-value=0.052 Score=39.52 Aligned_cols=45 Identities=2% Similarity=-0.076 Sum_probs=36.0
Q ss_pred CCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++++|| ++|.||+....|...+ +..++||..++.++..
T Consensus 30 ~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 87 (99)
T 2dnw_A 30 IDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIAD 87 (99)
T ss_dssp SCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 3456788899997 9999999998877655 4467899999888765
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=93.11 E-value=0.13 Score=46.68 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|+|+ |.+|+.+++.+...|. +|++++|+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 34689999999 9999999999999985 488888863
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=92.79 E-value=0.097 Score=49.14 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=52.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+|+|.|+ |-+|+++++.|...|++ |+++.+++ ++++..... -.+..+.||-++
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~---v~vId~d~------~~~~~~~~~--------------~~~~~i~Gd~~~ 57 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENND---ITIVDKDG------DRLRELQDK--------------YDLRVVNGHASH 57 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEE---EEEEESCH------HHHHHHHHH--------------SSCEEEESCTTC
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCH------HHHHHHHHh--------------cCcEEEEEcCCC
Confidence 3589999996 89999999999998877 88887753 223222111 257789999998
Q ss_pred CCCCCCHHHHHHH-hcCccEEEEcC
Q psy14522 208 PGLGLSAADRAVL-RRNVTVVFHGA 231 (298)
Q Consensus 208 ~~~gl~~~~~~~l-~~~vd~Vih~A 231 (298)
++ .+.++ .+++|.+|-.-
T Consensus 58 ~~------~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 58 PD------VLHEAGAQDADMLVAVT 76 (461)
T ss_dssp HH------HHHHHTTTTCSEEEECC
T ss_pred HH------HHHhcCCCcCCEEEEEc
Confidence 76 55555 45788887543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=92.65 E-value=0.069 Score=47.11 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|++.|. .+|++.+|..
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 45789999997 8899999999999984 3588888863
|
| >1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A | Back alignment and structure |
|---|
Probab=92.65 E-value=0.047 Score=37.87 Aligned_cols=45 Identities=11% Similarity=-0.033 Sum_probs=35.0
Q ss_pred CCccccccCCeE-EEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASV-FVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~f-f~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++++| +.+|.||+....+...+ +..++|+..++.++..
T Consensus 22 ~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (81)
T 1f80_D 22 VDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQN 79 (81)
T ss_dssp CCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC-
T ss_pred CCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHh
Confidence 345678899999 99999999998877655 4467888888877654
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=92.61 E-value=0.23 Score=43.40 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=30.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++.+|+.++..|+..|.. |+++.|
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~ 192 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHI 192 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999999754 776654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=92.60 E-value=0.053 Score=45.69 Aligned_cols=71 Identities=18% Similarity=0.076 Sum_probs=49.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|+|.|+ |.+|..+++.|.+.| . |+++.|++. ++... . .++.++.+|.+++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~------~~~~~--------------~--~~~~~i~gd~~~~ 61 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENV------RKKVL--------------R--SGANFVHGDPTRV 61 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGG------HHHHH--------------H--TTCEEEESCTTCH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHH------HHHHH--------------h--cCCeEEEcCCCCH
Confidence 568999997 999999999998875 2 666766532 11111 0 3578899999876
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
. .+... +.++|.||.+.+
T Consensus 62 ~------~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 62 S------DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp H------HHHHTTCTTCSEEEECCS
T ss_pred H------HHHhcCcchhcEEEEcCC
Confidence 5 56555 568899887764
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=92.55 E-value=0.092 Score=47.03 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=28.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLL 162 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l 162 (298)
..+++|||+||+|.+|...++.+...|.+ |++.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~---Vi~~ 181 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGAR---VFAT 181 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEE
Confidence 35789999999999999999888888754 7777
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=92.43 E-value=0.11 Score=46.88 Aligned_cols=98 Identities=11% Similarity=0.089 Sum_probs=57.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+.+|+|+|+ |.+|...++.+...|.+ |++++++.. +++...+ ..... .+ .|..+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---Vi~~~~~~~------~~~~~~~------------~lGa~-~v--~~~~~ 241 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK---VTVISTSPS------KKEEALK------------NFGAD-SF--LVSRD 241 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCGG------GHHHHHH------------TSCCS-EE--EETTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------hcCCc-eE--EeccC
Confidence 5789999996 99999999888777754 888887643 1111110 00111 12 23332
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccceEEEEeCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGSFVHVSTA 258 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g~~v~iSS~ 258 (298)
. +.+.++..++|+||++++........-.. ..-.|+++.+++.
T Consensus 242 ~------~~~~~~~~~~D~vid~~g~~~~~~~~~~~--l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 242 Q------EQMQAAAGTLDGIIDTVSAVHPLLPLFGL--LKSHGKLILVGAP 284 (366)
T ss_dssp H------HHHHHTTTCEEEEEECCSSCCCSHHHHHH--EEEEEEEEECCCC
T ss_pred H------HHHHHhhCCCCEEEECCCcHHHHHHHHHH--HhcCCEEEEEccC
Confidence 2 24555556899999999854222211112 2223488888774
|
| >3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A* | Back alignment and structure |
|---|
Probab=92.28 E-value=0.041 Score=38.33 Aligned_cols=45 Identities=7% Similarity=-0.054 Sum_probs=35.7
Q ss_pred CCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++.+|+ .+|.||+....++..+ +..++|+..++.++..
T Consensus 20 ~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 77 (81)
T 3gzm_A 20 VEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEK 77 (81)
T ss_dssp CCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHH
T ss_pred cCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHH
Confidence 3556788999997 9999999998876555 4567899999888764
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=92.22 E-value=0.17 Score=45.20 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=29.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|+|+ |.+|...++.+...|. .+|++++|+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~ 201 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPS 201 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 6789999999 9999999988888875 138888876
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=92.13 E-value=0.048 Score=42.29 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=28.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+++|+|.|+ |.+|..+++.|...|.+ |++.+|..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~---v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK---VTVAGRNI 54 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE---EEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEcCCH
Confidence 789999996 99999999999887643 88888863
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=91.84 E-value=0.11 Score=46.44 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=29.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|+||+|.+|...++.+...|. +|++++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~ 184 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASR 184 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 578999999999999998888877775 48888875
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=91.82 E-value=0.18 Score=47.06 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=29.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|+||+|.+|...++.+...|.+ |++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~---vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGAN---PICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCe---EEEEECC
Confidence 35789999999999999888888777754 7777764
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=91.68 E-value=0.26 Score=44.25 Aligned_cols=32 Identities=25% Similarity=0.581 Sum_probs=25.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
++|.|.||||.+|..+++.|.++ +++ .+..+.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~ 36 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH-PHM-NITALT 36 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEE
Confidence 58999999999999999988876 554 344443
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=91.59 E-value=0.23 Score=44.62 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=30.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+.+|||+|+ |.+|...++.+...|.+ |++++++..
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~---Vi~~~~~~~ 214 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAE---TYVISRSSR 214 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCE---EEEEESSST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEcCCHH
Confidence 35789999999 99999988887778754 888887654
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=91.52 E-value=0.054 Score=39.20 Aligned_cols=42 Identities=2% Similarity=-0.063 Sum_probs=34.2
Q ss_pred cccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 66 QEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 66 ~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.++.++++|+.+|.||+....|+.++ +..+||+..++.++..
T Consensus 26 ~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 79 (95)
T 1nq4_A 26 GGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNA 79 (95)
T ss_dssp CSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHH
T ss_pred ccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHH
Confidence 46888999999999999998887666 3467899988877653
|
| >2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} | Back alignment and structure |
|---|
Probab=91.50 E-value=0.014 Score=40.37 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=32.8
Q ss_pred CccccccCCeE-EEecCcccchHHHHHH------------HHhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASV-FVTGGTGFMGKTLTEK------------LLRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~f-f~~Gg~sl~~~~l~~~------------ll~~~ptv~~l~~~i~~ 107 (298)
+..++.++++| +.+|+||+.+..+... .+..+||+..++.++..
T Consensus 20 ~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 76 (79)
T 2l3v_A 20 DADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDK 76 (79)
T ss_dssp CSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHH
T ss_pred CHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 44578889999 9999999998655432 34567888888877654
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=91.36 E-value=0.4 Score=41.87 Aligned_cols=35 Identities=31% Similarity=0.401 Sum_probs=29.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.|
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 193 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHR 193 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 57899999999999999999999999754 766544
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=91.33 E-value=0.73 Score=41.08 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=29.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.++|.|+|+ |.+|+.++..|+..|. +..|.++++.
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 568999996 9999999999999874 3468888875
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=91.31 E-value=0.34 Score=45.51 Aligned_cols=100 Identities=9% Similarity=0.083 Sum_probs=57.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCc--ceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHL--ERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v--~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+|.| .|.+|+.+++.|+++ .++ ..|++.+.........+. .++.+...+++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~~~~~~~---------------------~g~~~~~~~Vd 69 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTKVDVAQQ---------------------YGVSFKLQQIT 69 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCSCCHHHH---------------------HTCEEEECCCC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhC-CCCceeEEEEeccchhhhhHHhh---------------------cCCceeEEecc
Confidence 46799999 899999999999998 433 467777665433221111 13455666665
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccceEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGSFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g~~v~iSS~ 258 (298)
..+. .+.+..++++.|+|||.+.......-++...+. .+.|++++
T Consensus 70 adnv---~~~l~aLl~~~DvVIN~s~~~~~l~Im~aclea----Gv~YlDTa 114 (480)
T 2ph5_A 70 PQNY---LEVIGSTLEENDFLIDVSIGISSLALIILCNQK----GALYINAA 114 (480)
T ss_dssp TTTH---HHHTGGGCCTTCEEEECCSSSCHHHHHHHHHHH----TCEEEESS
T ss_pred chhH---HHHHHHHhcCCCEEEECCccccCHHHHHHHHHc----CCCEEECC
Confidence 5431 012344555569999866433211222223333 45777775
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=91.26 E-value=0.22 Score=48.11 Aligned_cols=37 Identities=14% Similarity=0.324 Sum_probs=31.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++.+|+|.|+ |.+|+++++.|+..| |.++.+++.+
T Consensus 324 kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D 360 (598)
T 3vh1_A 324 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNG 360 (598)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCS
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCC
Confidence 456789999995 889999999999998 6788888554
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=91.21 E-value=0.45 Score=41.92 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=30.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENAT---VTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999999755 777665
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.41 Score=43.34 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=25.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+|.|.||||++|..|++.|.++ +.+..+.+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~S~~ 42 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYIKPAYLAGKG 42 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEEEST
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCceEEEEECch
Confidence 458999999999999999966655 654333343443
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.41 Score=43.34 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=25.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+|.|.||||++|..|++.|.++ +.+..+.+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~S~~ 42 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYIKPAYLAGKG 42 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEEEST
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCceEEEEECch
Confidence 458999999999999999966655 654333343443
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=91.15 E-value=0.05 Score=48.42 Aligned_cols=36 Identities=22% Similarity=0.149 Sum_probs=29.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~ 166 (298)
|+|.|+||+|.+|..++..|..+ +. +..+.++++..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~-~~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-TEEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-CceEEEEecCC
Confidence 57999999999999999888776 42 35688888764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=91.11 E-value=0.077 Score=47.70 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=26.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhC-CCcceEEEec
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLV 163 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~ 163 (298)
.++|.|.||||.+|+.+++.|.+++ ++ .++..+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~-~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPV-DELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCE-EEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCC-EEEEEEE
Confidence 4689999999999999999998874 33 3355444
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=91.08 E-value=0.28 Score=44.04 Aligned_cols=38 Identities=13% Similarity=0.316 Sum_probs=32.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++++|+|.|+ |.+|+++++.|+..| |.++.++++..
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCB
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCE
Confidence 356889999995 889999999999998 67888887753
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=91.04 E-value=0.29 Score=44.50 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=26.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
..+|.|.||||++|..|++.|.+.++....+..+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 35899999999999999998777644334455443
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=90.97 E-value=0.41 Score=41.85 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=29.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.+
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAt---Vtv~hs 193 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCT---VTVTHR 193 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999998754 766544
|
| >2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.90 E-value=0.1 Score=45.66 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=37.7
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHH-----------HhhCCChHHhHHhhc
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKL-----------LRACPHLERVYLLVR 106 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l-----------l~~~ptv~~l~~~i~ 106 (298)
.+..++..+++||++|+||+.++.++.++ ++++||+..++.++.
T Consensus 229 ~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 229 DESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTTCTTCCHHHHHTSCSHHHHHHHHH
T ss_pred CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHcCCCCCHHHHHhCccHHHHHHHHH
Confidence 44567899999999999999999998875 667899999998776
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=90.88 E-value=0.28 Score=43.85 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=30.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++|.|+|+ |.+|+.++..|+..|. +..|.++++.
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCC
Confidence 4578999996 9999999999999864 3568888874
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=90.85 E-value=0.71 Score=41.53 Aligned_cols=40 Identities=25% Similarity=0.238 Sum_probs=27.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCC---C-cceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACP---H-LERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~---~-v~~V~~l~R~ 165 (298)
.+..-+|.|+||+|.||+.++..|..... + ...+.+++..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~ 64 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE 64 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC
Confidence 34556899999999999999887766421 1 1246667654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.61 E-value=0.27 Score=44.47 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
..+.+|+|+||+|.+|...++.+...|.+ |++..+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~---Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAH---VTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEeC
Confidence 35789999999999999988887777744 777663
|
| >3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* | Back alignment and structure |
|---|
Probab=90.49 E-value=0.11 Score=37.78 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=35.3
Q ss_pred CCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 63 SPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 63 ~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+..++.++.+|+ ++|.||+....|+..+ +..++||..++.++..
T Consensus 37 ~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 94 (97)
T 3ejb_A 37 VKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING 94 (97)
T ss_dssp CCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHH
T ss_pred cCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 4556788899997 9999999998876555 4467888888887764
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=90.25 E-value=0.42 Score=41.55 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=30.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt---Vtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT---VSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCe---EEEEeC
Confidence 68999999999999999999999999755 776654
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=90.23 E-value=0.34 Score=46.83 Aligned_cols=38 Identities=13% Similarity=0.316 Sum_probs=32.5
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++.+|+|.|+ |.+|+++++.|+..| |.++.+++++.
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCB
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCC
Confidence 357889999995 889999999999998 67898888764
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=90.20 E-value=0.13 Score=44.94 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=31.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|+|++|.+|...++.+...|.+ |++++|+.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~---Vi~~~~~~ 160 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLR---VLAAASRP 160 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35789999999999999999888888754 88888864
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=90.13 E-value=0.37 Score=44.77 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=29.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+.+|+|.|+ |.+|+++++.|+..| |.++.+++..
T Consensus 38 L~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D 73 (434)
T 1tt5_B 38 LDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMD 73 (434)
T ss_dssp HHTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECC
T ss_pred hcCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCC
Confidence 35788999996 889999999999998 5678887544
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=0.32 Score=44.26 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+++|+|+|+ |.+|..+++.+...|.+ |++++|.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~---V~~~d~~ 200 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGAT---VTVLDIN 200 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 56899999998 99999999999998854 8888886
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=90.08 E-value=0.42 Score=43.16 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=25.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
-+|.|.||||++|..|++.|.++ +.+ ++..+.
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~ 45 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS 45 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 47999999999999999999987 664 444443
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=90.03 E-value=0.25 Score=43.63 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=28.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
..+.+|+|+||+|.+|...++.+...|.+ |++..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~---vi~~~~ 185 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTT---VITTAS 185 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEEC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCE---EEEEec
Confidence 45789999999999999988888777754 777664
|
| >2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=89.65 E-value=0.14 Score=35.53 Aligned_cols=44 Identities=2% Similarity=-0.018 Sum_probs=34.0
Q ss_pred CccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++|| .+|.||+....+...+ +..++|+..++.++..
T Consensus 23 ~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (82)
T 2qnw_A 23 DRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEK 79 (82)
T ss_dssp CGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred CHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHH
Confidence 456788899995 9999999998876655 3457888888877653
|
| >1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=89.27 E-value=0.13 Score=38.53 Aligned_cols=44 Identities=9% Similarity=-0.028 Sum_probs=35.1
Q ss_pred CccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+..++.++++|| .+|+||+....+...+ +..++||..++.++..
T Consensus 23 ~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 79 (115)
T 1klp_A 23 EPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp CTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 446788899997 9999999998876655 4567899999987765
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=89.19 E-value=1.1 Score=39.95 Aligned_cols=36 Identities=22% Similarity=0.121 Sum_probs=29.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.++|.|.|| |.+|..++..|...|+ + .|.++++...
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChh
Confidence 468999998 9999999999999976 1 2888888753
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=89.03 E-value=0.81 Score=41.95 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=31.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++|+|.|+ |.+|..+++.|...|. .+|++.+|..
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 9999999999999984 3588888863
|
| >1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* | Back alignment and structure |
|---|
Probab=89.01 E-value=0.22 Score=34.84 Aligned_cols=41 Identities=7% Similarity=-0.078 Sum_probs=32.7
Q ss_pred ccccCCeEEEecCcccchHHHHHHHH------------hhCCChHHhHHhhcc
Q psy14522 67 EFYRGASVFVTGGTGFMGKTLTEKLL------------RACPHLERVYLLVRP 107 (298)
Q Consensus 67 ~~~~~~~ff~~Gg~sl~~~~l~~~ll------------~~~ptv~~l~~~i~~ 107 (298)
++.++.+|+.+|.||+....+...+- ..++|+..++.++..
T Consensus 28 ~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 80 (86)
T 1af8_A 28 GDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLING 80 (86)
T ss_dssp TCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHH
T ss_pred cCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHH
Confidence 67888999999999999998887763 356788888877653
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=88.97 E-value=0.16 Score=44.05 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=30.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|++.|. +|++.+|..
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~---~v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQ---NIVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTC---EEEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 46789999998 8899999999999984 488888863
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=88.59 E-value=0.18 Score=44.90 Aligned_cols=71 Identities=17% Similarity=0.050 Sum_probs=49.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++++|.|+ |.+|+.+++.|.+.|+ |.++.+++. +.+ +.. .++.++.||.+++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~------~~~--~~~--------------~~~~~i~gd~~~~ 167 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENV------RKK--VLR--------------SGANFVHGDPTRV 167 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGG------HHH--HHH--------------TTCEEEESCTTSH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChh------hhh--HHh--------------CCcEEEEeCCCCH
Confidence 568999996 9999999999988752 666666432 222 111 4678999999887
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 209 GLGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 209 ~~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
+ .+.++ .+++|.++-+.+
T Consensus 168 ~------~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 168 S------DLEKANVRGARAVIVDLE 186 (336)
T ss_dssp H------HHHHTCSTTEEEEEECCS
T ss_pred H------HHHhcChhhccEEEEcCC
Confidence 5 56655 567888887654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=88.36 E-value=0.32 Score=42.28 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=31.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|.+.|. .+|++.+|..
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 46899999997 8899999999999983 4588888863
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=88.14 E-value=1 Score=39.62 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.+
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 197 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCHS 197 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEEC
Confidence 57899999999999999999999998754 776543
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=87.92 E-value=1.4 Score=37.10 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=30.9
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+++|||.|| |-+|...++.|++.|.+ |+++...
T Consensus 27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp ECCTTCCEEEECC-SHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEECCC
Confidence 3467999999996 78999999999999877 7777664
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=87.65 E-value=1.3 Score=39.70 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=25.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
+.+|.|.||||++|..|++.|.++.+....+..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 35799999999999999997776532333455443
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=87.63 E-value=0.47 Score=42.65 Aligned_cols=35 Identities=20% Similarity=0.103 Sum_probs=28.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|+| +|.+|...++.+...|.+ |++++++
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~---Vi~~~~~ 222 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGAE---VIVTSSS 222 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCE---EEEEecC
Confidence 3578999999 899999888877777754 8888775
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=87.47 E-value=0.32 Score=42.45 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=31.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|+|+ |.+|+.++..|.+.|. .+|++.+|..
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence 46899999997 8899999999999983 3588888863
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=87.46 E-value=0.45 Score=42.96 Aligned_cols=36 Identities=22% Similarity=0.135 Sum_probs=28.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+.+|||+|+ |.+|...++.+...|.. |+++++++
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~---Vi~~~~~~ 228 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAH---VVAFTTSE 228 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35789999998 88999888877777654 88888764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=87.32 E-value=0.47 Score=42.21 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=29.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|+|+ |.+|...++.+...|. .+|++++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~ 198 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPN 198 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 6789999999 9999999888777775 138888876
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=87.18 E-value=0.2 Score=43.71 Aligned_cols=35 Identities=9% Similarity=0.189 Sum_probs=30.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++++|||+. .+|+.++..|++.| + |++..|..
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~---V~v~~r~~ 160 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-N---IIIANRTV 160 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-E---EEEECSSH
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-C---EEEEECCH
Confidence 467899999985 99999999999998 5 88888863
|
| >2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=87.00 E-value=0.12 Score=38.05 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=35.4
Q ss_pred CCCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 62 GSPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 62 ~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+.+..++.++++|.++|.||+.+..|+..+ +..++||..++.++..
T Consensus 40 ~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~ 97 (103)
T 2lte_A 40 GVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEK 97 (103)
Confidence 456678999999999999999997765544 3456777777777665
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=87.03 E-value=0.42 Score=42.21 Aligned_cols=34 Identities=29% Similarity=0.276 Sum_probs=29.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+|+|+||+|.+|...++.+...|.+ |++++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~---vi~~~~~~~ 186 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYD---VVASTGNRE 186 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCC---EEEEESSSS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 7999999999999999888888865 888888643
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=86.84 E-value=0.41 Score=42.72 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=29.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+.+|+|+|+ |.+|...++.+...|. +|+++++++.
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~~ 211 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGA---EVSVFARNEH 211 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTC---EEEEECSSST
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 35789999997 9999988877777764 4888887654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=86.74 E-value=0.64 Score=39.86 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=29.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+ +++|.|+ |..|++++..|++.|. .+|++.+|..
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESCH
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 56 8999996 8999999999999985 3589999863
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=86.67 E-value=1.4 Score=38.97 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=31.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+|+|.|.| .|.||+.+++.|...|.+ |+..+|...
T Consensus 137 l~g~tvGIiG-~G~IG~~vA~~l~~~G~~---V~~~dr~~~ 173 (315)
T 3pp8_A 137 REEFSVGIMG-AGVLGAKVAESLQAWGFP---LRCWSRSRK 173 (315)
T ss_dssp STTCCEEEEC-CSHHHHHHHHHHHTTTCC---EEEEESSCC
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHHCCCE---EEEEcCCch
Confidence 5689999998 599999999999988876 888888654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=86.62 E-value=1.1 Score=40.82 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=23.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
...+|.|+||+|++|.+++-.|+..+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~ 56 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGE 56 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCC
Confidence 46789999999999999999998875
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=86.62 E-value=0.72 Score=40.34 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=30.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++++|.|+ |.+|+.+++.|...|.+ |++.+|.
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~---V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGAN---VKVGARS 189 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCE---EEEEECC
Confidence 356899999995 99999999999988754 8888886
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=86.45 E-value=0.78 Score=40.16 Aligned_cols=38 Identities=29% Similarity=0.415 Sum_probs=29.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
...+|.|.|++|.+|+.+++.+.+. ++..-|-+++|..
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 3468999999999999999998876 6655566667753
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=86.31 E-value=0.45 Score=43.07 Aligned_cols=35 Identities=23% Similarity=0.519 Sum_probs=27.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
...+|.|.||+|.+|+.+++.|.++ +++. +..+.+
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~-p~~e-lvai~~ 49 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANH-PHFQ-VTLMTA 49 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTC-SSEE-EEEEBC
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcC-CCcE-EEEEeC
Confidence 4468999999999999999999877 5533 555544
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=86.30 E-value=0.96 Score=39.54 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=29.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+.+++++|.|+++-+|+.++..|+..|.. |+++.+.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs~ 192 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTHRF 192 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEECSS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 57899999999999999999999998744 7766543
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=86.19 E-value=0.87 Score=40.35 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=28.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|+|+ |.+|...++.+...|. +|++++++
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~ 199 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGL---RVAAVDID 199 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTC---EEEEEESC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCC
Confidence 45789999997 8899988887777775 48888775
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=86.04 E-value=0.6 Score=41.71 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=27.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|+|+ |.+|...++.+...|.+ |+++.++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~---Vi~~~~~ 201 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAF---VVCTARS 201 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEcCC
Confidence 35789999997 99999888877777754 8887765
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=86.04 E-value=0.98 Score=40.70 Aligned_cols=36 Identities=28% Similarity=0.346 Sum_probs=28.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|||+|+ |.+|...++.+...|. .+|++..++
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~ 216 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQ 216 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 35789999998 9999988877777774 258877765
|
| >2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=86.03 E-value=0.26 Score=34.30 Aligned_cols=43 Identities=9% Similarity=-0.057 Sum_probs=33.4
Q ss_pred CccccccCCeE-EEecCcccchHHHHHHHH------------hhCCChHHhHHhhc
Q psy14522 64 PIQEFYRGASV-FVTGGTGFMGKTLTEKLL------------RACPHLERVYLLVR 106 (298)
Q Consensus 64 ~~~~~~~~~~f-f~~Gg~sl~~~~l~~~ll------------~~~ptv~~l~~~i~ 106 (298)
+..++.++++| ..+|.||+....+...+- ..++|+..++.++.
T Consensus 25 ~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 80 (84)
T 2kwl_A 25 KEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIK 80 (84)
T ss_dssp CGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHH
T ss_pred CcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHH
Confidence 45678889999 899999999988876653 35678888877654
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=85.87 E-value=0.43 Score=39.63 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=28.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.++|.|.| +|.+|..+++.|.+.|++ |++++|+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~---V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFK---VVVGSRN 60 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 46899999 899999999999999876 8888885
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=85.81 E-value=0.89 Score=40.66 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=26.4
Q ss_pred ceeeecCCCCCCchhH-HHHH-HHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTL-TEKL-LRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l-~~~L-l~~g~~v~~V~~l~R~~~ 167 (298)
.+|+|+|+ |.+|... ++.+ ...|. .+|++++++..
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 89999999 9999988 6655 45553 34888887643
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=85.78 E-value=0.85 Score=39.77 Aligned_cols=36 Identities=28% Similarity=0.344 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|+|.| .|.+|+.+++.|...|.+ |++.+|..
T Consensus 153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~---V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLG-LGRVGMSVARKFAALGAK---VKVGARES 188 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCCE---EEEEECCH
Confidence 5689999999 599999999999988754 88888863
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=85.70 E-value=1.4 Score=37.47 Aligned_cols=34 Identities=24% Similarity=0.108 Sum_probs=25.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~ 165 (298)
++|.|.|++|.+|+.+++.+.+. +.+ -|.+++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~e--lva~~d~~ 35 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLT--LSAELDAG 35 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCE--EEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCE--EEEEEccC
Confidence 47999999999999999998765 333 24445543
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=85.61 E-value=1.4 Score=40.00 Aligned_cols=37 Identities=22% Similarity=0.073 Sum_probs=30.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+++|+|.|+ |.+|...++.+...|.. |++.+|...
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~---V~~~d~~~~ 206 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAV---VMATDVRAA 206 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 36889999995 99999999999888753 888888754
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=85.47 E-value=3.4 Score=36.53 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=30.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
|+|.|+|+ |.+|..++..|+..|. +..|.++++...
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchH
Confidence 57999996 9999999999999864 456999988754
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=85.46 E-value=1.4 Score=40.99 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=28.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.| +|.+|..++..|.+.|++ |++++|++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 6788888 599999999999999876 89999864
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=85.41 E-value=3.3 Score=36.22 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=28.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
|+|.|.|| |++|+.++..|+.++ -+.++.+++..
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIA 34 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 57899995 999999999999885 35678888875
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=85.38 E-value=1.4 Score=38.63 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=29.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|+|+ |.+|..++..|+..|. +..|.++++.+
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAE 35 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCh
Confidence 57999999 9999999999999865 34689988864
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=85.35 E-value=1.3 Score=38.62 Aligned_cols=37 Identities=30% Similarity=0.281 Sum_probs=28.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+++++|.|++.-+|+.++..|+..|.. .+|+++.|
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~-atVtv~h~ 192 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSEN-ATVTLCHT 192 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTTC-CEEEEECT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCCC-CEEEEEEC
Confidence 57899999999989999999999887211 34776654
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.30 E-value=0.5 Score=41.69 Aligned_cols=34 Identities=26% Similarity=0.216 Sum_probs=28.7
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+|+|+|++|.+|...++.+...|.+ |++++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~---vi~~~~~~~ 185 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAA 185 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCHH
Confidence 7999999999999998888778765 888888643
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=85.26 E-value=1.5 Score=42.66 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=54.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHH--------HHHHHHHHHhhhhhcCccccCCe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERL--------DELFEDRLFSRLKAEVPHFRSKI 198 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl--------~~~~~~~~~~~l~~~~~~~~~~v 198 (298)
+.+.+|+|.|+ |.+|+++++.|+..| |.++.+++...-...-..|- ........-..+....+ .-++
T Consensus 15 L~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP--~v~V 89 (640)
T 1y8q_B 15 VAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP--KANI 89 (640)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT--TCEE
T ss_pred HhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC--CCeE
Confidence 45678999996 889999999999998 66788887653211111110 00000000011111111 1255
Q ss_pred EEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCc
Q psy14522 199 SVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAA 232 (298)
Q Consensus 199 ~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~ 232 (298)
..+..+++...+ ...++.++|+||.+..
T Consensus 90 ~a~~~~i~~~~~------~~~~~~~~DlVvda~D 117 (640)
T 1y8q_B 90 VAYHDSIMNPDY------NVEFFRQFILVMNALD 117 (640)
T ss_dssp EEEESCTTSTTS------CHHHHTTCSEEEECCS
T ss_pred EEEecccchhhh------hHhhhcCCCEEEECCC
Confidence 666777754431 2355688999998854
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=85.00 E-value=0.27 Score=45.58 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=29.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+++|+|+||+|.+|...++.+...|.+ |++.+++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~---vi~~~~~ 254 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGI---PVAVVSS 254 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 35789999999999999988888877754 7777764
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=84.94 E-value=0.53 Score=42.35 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=30.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+.+|+|.|+ |.+|+++++.|+..| |.++.+++..
T Consensus 33 ~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCC
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECC
Confidence 456789999995 789999999999998 6678887543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=84.89 E-value=0.84 Score=40.86 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=27.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|||+|+ |.+|...++.+...|.. +|++..++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--~Vi~~~~~ 213 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGAC--PLVITDID 213 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCC--SEEEEESC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEECCC
Confidence 35789999998 99999888777777643 47777765
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=84.87 E-value=0.97 Score=41.24 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=28.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|+|+ |.+|...++.+...|. .+|+++.++
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~ 247 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPS 247 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 35789999998 9999988877777774 358888765
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=84.78 E-value=1.2 Score=40.01 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=27.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
..+.+|+|+||+|.+|...++.+...|.+ |++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~---Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYI---PIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCE---EEEEe
Confidence 45789999999999999888888777754 77665
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=84.65 E-value=2 Score=38.10 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=31.4
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+++++|.|++.-+|..+++.|+..|.. |++++|.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt---Vtv~nR~ 210 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGAT---VYSVDVN 210 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCE---EEEECSS
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCE---EEEEeCc
Confidence 357899999999888999999999998744 8888775
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=84.63 E-value=0.6 Score=40.50 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=30.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+++++|.|+ |..|+.++..|.+.|. +|++.+|...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~---~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGL---QVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSCT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 789999996 9999999999999984 4899999854
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=84.57 E-value=0.92 Score=39.57 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=31.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+++++|.|+ |..|+.++..|.+.|. .+|++++|..
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~--~~v~v~nRt~ 156 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFA--KDIYVVTRNP 156 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 45889999996 8899999999999974 4588888863
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=84.52 E-value=0.3 Score=35.91 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=33.1
Q ss_pred CccccccCCeEEEecCcccchHHHHHHHHh--------------hCCChHHhHHhhcc
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKLLR--------------ACPHLERVYLLVRP 107 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~--------------~~ptv~~l~~~i~~ 107 (298)
+..++.++++||++|.||+....|+..+-. .++|+..++.++..
T Consensus 40 ~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~~ 97 (105)
T 2jq4_A 40 PVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL 97 (105)
T ss_dssp CGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHH
T ss_pred CcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHHH
Confidence 456788999999999999999888765522 34577777766553
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=84.48 E-value=1.6 Score=39.70 Aligned_cols=36 Identities=19% Similarity=0.085 Sum_probs=30.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+|+|.|+ |-+|...++.+...|.+ |++++|...
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~---V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAK---TTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCE---EEEECSSGG
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 5789999997 99999999999999865 889988743
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=84.40 E-value=0.72 Score=41.33 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=28.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+|+|+|+ |.+|...++.+...|. +|++++++..
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga---~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGH---HVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCChH
Confidence 5789999995 9999998888777775 4888887643
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=84.37 E-value=0.48 Score=41.03 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=29.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
++|.|.|+||.+|..+++.|.+.|++ |++++|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~---V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHH---LAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSE---EEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECC
Confidence 58999999999999999999999865 8888875
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=83.82 E-value=3 Score=38.62 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=30.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+|+|+|.|. |..|..+++.|.++|++ |.+.++..
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~---V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGAI---VTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTCE---EEEEESSC
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCCE---EEEEeCCc
Confidence 45789999998 88999999999999877 88888754
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=83.75 E-value=1.9 Score=38.75 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=30.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+.+|+|+|+ |.+|...++.+...|. .+|+++.+++.
T Consensus 192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga--~~Vi~~~~~~~ 229 (378)
T 3uko_A 192 EPGSNVAIFGL-GTVGLAVAEGAKTAGA--SRIIGIDIDSK 229 (378)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSCTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHH
Confidence 35789999998 9999988888877875 24888887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 298 | ||||
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-07 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 9e-06 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-06 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 8e-06 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-06 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 3e-05 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 3e-05 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 3e-05 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 9e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-05 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-04 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-04 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-04 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.002 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 1e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 4e-04 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-04 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-04 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 0.003 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-04 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 3e-04 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 3e-04 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 4e-04 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 7e-04 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 8e-04 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 9e-04 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 0.003 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 0.001 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 0.001 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 0.001 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 0.004 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.002 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.002 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.003 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.004 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.003 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.003 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 0.004 |
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 47.9 bits (112), Expect = 6e-07
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Query: 68 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFY 127
F++G VFVTG TGF G L+ L V + + +
Sbjct: 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPSLFETARVADGMQSE 61
Query: 128 RG 129
G
Sbjct: 62 IG 63
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 44.1 bits (102), Expect = 9e-06
Identities = 20/84 (23%), Positives = 29/84 (34%), Gaps = 19/84 (22%)
Query: 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDR 182
+ F++G VFVTG TGF G L+ L G TV + L
Sbjct: 2 NNSFWQGKRVFVTGHTGFKGGWLSLWLQ---------------TMGATV--KGYSLTAPT 44
Query: 183 LFSRLKAEVPHFRSKISVVTGDVS 206
+ S + + GD+
Sbjct: 45 VPSLFETA--RVADGMQSEIGDIR 66
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 46.0 bits (107), Expect = 2e-06
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR-PKKGKTVSERLDELFEDRLFSR 186
G+ V VTG GF+ + E+LL +V R K + +R D + R +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDAKYPGRFETA 66
Query: 187 LKAEV 191
+ ++
Sbjct: 67 VVEDM 71
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 44.4 bits (103), Expect = 8e-06
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 70 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR-PKKGKTVSERLDELFEDREFY 127
G+ V VTG GF+ + E+LL +V R K + +R D + R
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDAKYPGRFET 65
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 45.5 bits (107), Expect = 4e-06
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 24/142 (16%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ +TGG GF+G + ++ K + +D+L L
Sbjct: 3 ILITGGAGFIGSAVVRHII---------------KNTQDTVVNIDKLTYAGNLESLSDIS 47
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIK---VAIAINI 248
++ + D+ + R + V H AA D +I I NI
Sbjct: 48 ES--NRYNFEHADICDS----AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNI 101
Query: 249 FGSFVHVSTAYTHCPRQEIDEV 270
G++ + A + D+
Sbjct: 102 VGTYALLEVARKYWSALGEDKK 123
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.1 bits (97), Expect = 3e-05
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V + G TG G+ L +++L P L +V R + L +L +
Sbjct: 5 VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSI 63
Query: 192 PHF 194
Sbjct: 64 DTA 66
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.7 bits (96), Expect = 3e-05
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 108
V + G TG G+ L +++L P L +V R
Sbjct: 5 VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKA 38
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 42.7 bits (98), Expect = 3e-05
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLK 188
G+ V V GG G+ G L + + V LVR + + R+
Sbjct: 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLE-SLTPIASIHDRIS 59
Query: 189 AEVPHFRSKISVVTGDVS 206
I + GD+
Sbjct: 60 RWKALTGKSIELYVGDIC 77
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.0 bits (86), Expect = 9e-04
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 71 GASVFVTGGTGFMGKTLTEKLLRA 94
G+ V V GG G+ G L +
Sbjct: 1 GSRVMVIGGDGYCGWATALHLSKK 24
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 8e-05
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 21/110 (19%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V VTGG+G++G +LL + G V LD L + S L
Sbjct: 3 VLVTGGSGYIGSHTCVQLL---------------QNGHDVI-ILDNLCNSKR-SVLPVIE 45
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIK 241
+ V GD+ + + + V H A E+++
Sbjct: 46 RLGGKHPTFVEGDIRNE----ALMTEILHDHAIDTVIHFAGLKAVGESVQ 91
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 65 IQEFYR--GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 108
++E +R SVF+ G +G G+ L +++L +V L+ R K
Sbjct: 6 LREDFRMQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 50
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.1 bits (92), Expect = 1e-04
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 124 REFYR--GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166
RE +R SVF+ G +G G+ L +++L +V L+ R K
Sbjct: 7 REDFRMQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 50
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 40.9 bits (94), Expect = 1e-04
Identities = 18/75 (24%), Positives = 27/75 (36%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V V GG G++G LLR H + + GK+ E +L +
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64
Query: 192 PHFRSKISVVTGDVS 206
P ++ GDV
Sbjct: 65 PWADRYAALEVGDVR 79
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 37.1 bits (84), Expect = 0.002
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPH 97
V V GG G++G LLR H
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNH 28
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (94), Expect = 1e-04
Identities = 31/158 (19%), Positives = 48/158 (30%), Gaps = 52/158 (32%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+ +TGG GF+G LT+KL+ G V D F+ K V
Sbjct: 4 ILITGGAGFVGSHLTDKLM---------------MDGHEV------TVVDNFFTGRKRNV 42
Query: 192 PHF--RSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATV---RFDENIKVAIAI 246
H+ ++ DV P L V ++H A+ + N +
Sbjct: 43 EHWIGHENFELINHDVVEP-----------LYIEVDQIYHLASPASPPNYMYNPIKTLKT 91
Query: 247 NIFGS-------------FVHVSTA--YTHCPRQEIDE 269
N G+ + ST+ Y E
Sbjct: 92 NTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 129
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.2 bits (92), Expect = 1e-04
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRG 129
V VTG +G G+ + +KL LVR ++ +++ + + + G
Sbjct: 6 VLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRS------AQGKEKIGGEADVFIG 54
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.7 bits (88), Expect = 4e-04
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164
V VTG +G G+ + +KL LVR
Sbjct: 6 VLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVR 37
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190
++ VTGG GF+G + P V++ V LD+L + L+A
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHP---DVHVTV-----------LDKLTYAGNKANLEA- 48
Query: 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIF 249
++ +V GD++ D+ + + V + + + I N
Sbjct: 49 --ILGDRVELVVGDIADA----ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFI 102
Query: 250 GSFVHVSTAYTHCPRQE---IDEVFYPPPYDYKD 280
G++ + A + R DEV+ P
Sbjct: 103 GTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDL 136
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.4 bits (88), Expect = 6e-04
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 73 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDR-EFYRG 129
++ VTGG GF+G + P + L G L+ + DR E G
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAILGDRVELVVG 59
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 39.8 bits (92), Expect = 2e-04
Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 33/157 (21%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+TG TG G L E LL V+ + R ER+D +++D
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFNT-ERVDHIYQDPHTC------ 53
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGS 251
K + GD+S L+ R V V + + E+ + ++ G+
Sbjct: 54 ---NPKFHLHYGDLSDTSN-LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGT 109
Query: 252 -----------------FVHVSTA--YTHCPRQEIDE 269
F ST+ Y E
Sbjct: 110 LRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKE 146
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 36.3 bits (83), Expect = 0.003
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREFYRGASVF 133
+TG TG G L E LL V+ + R ER+D +++D
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFNT-ERVDHIYQDPHTCNPKFHL 59
Query: 134 VTG 136
G
Sbjct: 60 HYG 62
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 36/178 (20%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
+TG TG G L E LL V+ +VR R R+ K
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGY---EVHGIVR---------RSSSFNTGRIEHLYKNPQ 51
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGS 251
H + + GD++ + + + + + + + ++ G+
Sbjct: 52 AHIEGNMKLHYGDLTDSTCLVKIINEVK-PTEIYNLGAQSHVKISFDLAEYTADVDGVGT 110
Query: 252 -----------------FVHVSTA--YTHCPRQEIDE--VFYPP-PYDY-KDFMELVM 286
F ST+ Y E FYP PY K + ++
Sbjct: 111 LRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV 168
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 39.4 bits (90), Expect = 3e-04
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRE 125
+ + G TG++G+ + + L +LLVR + SE+ L +
Sbjct: 6 ILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFKA 54
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 39.4 bits (90), Expect = 3e-04
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDR 182
+ + G TG++G+ + + L +LLVR + SE+ L +
Sbjct: 6 ILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFK 53
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.9 bits (89), Expect = 4e-04
Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 24/153 (15%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V VTGG G++G +L+ + G D L S + EV
Sbjct: 4 VLVTGGAGYIGSHTVVELI---------------ENGYDCV-VADNLSNSTYDSVARLEV 47
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIK---VAIAINI 248
+ I D+ ++ + V H A E+ + NI
Sbjct: 48 -LTKHHIPFYEVDLCDR----KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNI 102
Query: 249 FGSFVHVSTAYTHCPRQEIDEVFYPPPYDYKDF 281
G+ V + + + + D F
Sbjct: 103 LGTVVLLELMQQYNVSKFVFSSSATVYGDATRF 135
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (87), Expect = 7e-04
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDR--EFYRG 129
V + G GF+G LTE+LLR + VY L S+ + F G
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHY--EVYGLDI------GSDAISRFLNHPHFHFVEG 52
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 38.0 bits (86), Expect = 8e-04
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 132 VFVTGGTGFMGKTLTEKLLRA 152
V + G GF+G LTE+LLR
Sbjct: 3 VLILGVNGFIGNHLTERLLRE 23
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 38.2 bits (87), Expect = 9e-04
Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 25/126 (19%)
Query: 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKA 189
A + +TGG GF+G L L +G + D L L
Sbjct: 1 AKLLITGGCGFLGSNLASFAL---------------SQGIDLI-VFDNLSRKGATDNLHW 44
Query: 190 EVPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIK---VAIAI 246
V GD+ + R + + FH A V +I + I
Sbjct: 45 LSSL--GNFEFVHGDIRNK----NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEI 98
Query: 247 NIFGSF 252
N+ G+
Sbjct: 99 NVGGTL 104
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 36.6 bits (83), Expect = 0.003
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 72 ASVFVTGGTGFMGKTLTEKLLRA 94
A + +TGG GF+G L L
Sbjct: 1 AKLLITGGCGFLGSNLASFALSQ 23
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 37.7 bits (85), Expect = 0.001
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPH 97
+ VTGG GF+G + + L
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGIT 25
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 37.7 bits (85), Expect = 0.001
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPH 155
+ VTGG GF+G + + L
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGIT 25
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 37.4 bits (85), Expect = 0.001
Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 16/151 (10%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
V + GGTG++GK + + Y+L RP+ +++ +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSN-------------IDKVQMLL 49
Query: 192 PHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFGS 251
+ ++ + + A + + + + + + AI
Sbjct: 50 YFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 109
Query: 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFM 282
S E + K +
Sbjct: 110 RFLPSEFGMDPDIMEHALQPGSITFIDKRKV 140
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 35.9 bits (81), Expect = 0.004
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG 110
V + GGTG++GK + + Y+L RP+
Sbjct: 6 VLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVV 39
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 37.3 bits (85), Expect = 0.002
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEV 191
VTG TG G L + LL RV+ LV + T RL EL + ++
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDT-RWRLRELGIEGDIQYEDGDM 58
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.9 bits (84), Expect = 0.002
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDREF 126
VTG TG G L + LL RV+ LV + T RL EL + +
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDT-RWRLRELGIEGDI 51
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 36.1 bits (81), Expect = 0.003
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK---TVSERLDELFEDREF 126
+ + G TG +G L L + L V K+ + + + E
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKEFCGDFSNPKGVAETVRKLRP 55
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 36.1 bits (81), Expect = 0.004
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 6/53 (11%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK---TVSERLDELFED 181
+ + G TG +G L L + L V K+ + + + E
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKEFCGDFSNPKGVAETVRK 52
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.003
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 106
+ + G TG G T + ++A V +LVR
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.003
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164
+ + G TG G T + ++A V +LVR
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.8 bits (81), Expect = 0.004
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 74 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRE 125
+TG TG G LTE LL V+ L+R +R++ ++ D
Sbjct: 4 ALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRINHIYIDPH 51
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.78 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.72 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.7 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.69 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.67 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.67 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.67 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.65 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.64 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.64 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.62 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.62 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.62 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.6 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.59 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.59 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.59 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.58 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.55 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.53 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.51 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.5 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.49 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.49 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.49 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.49 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.48 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.48 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.48 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.48 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.48 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.47 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.46 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.46 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.46 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.46 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.46 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.46 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.45 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.45 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.45 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.45 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.44 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.44 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.43 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.42 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.42 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.4 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.39 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.39 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.39 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.38 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.38 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.38 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.38 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.37 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.37 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.35 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.34 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.34 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.34 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.33 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.33 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.33 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.33 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.33 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.32 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.32 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.3 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.3 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.3 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.29 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.28 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.28 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.27 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.26 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.26 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.23 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.21 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.21 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.18 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.15 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.15 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.07 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.06 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.98 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.97 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.94 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.89 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.87 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.81 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.71 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.67 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.54 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.54 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.47 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 98.04 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.98 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.86 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 96.76 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.66 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 96.43 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.35 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 96.34 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.28 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.26 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 96.23 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 96.2 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.15 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.87 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 95.83 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.8 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 95.57 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 95.46 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 95.42 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 95.26 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 95.22 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.21 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 95.17 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 94.72 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.71 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 94.59 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 94.53 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 94.5 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.49 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 94.49 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 94.44 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 94.43 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 94.35 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 94.22 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 94.17 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 94.1 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 94.05 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 93.7 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 93.69 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 93.68 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 93.64 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.49 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.03 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 92.92 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 92.81 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 92.78 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 92.69 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 92.69 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 92.32 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 91.83 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 91.81 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 91.72 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 91.71 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 91.6 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 91.4 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 91.36 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 91.3 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 91.15 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 91.09 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 91.01 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 90.79 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 90.51 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 90.44 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.28 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 90.07 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 90.02 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.94 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 89.86 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 89.25 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 89.24 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 89.13 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 88.94 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 88.8 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 88.67 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.65 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 88.53 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.47 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 88.39 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.17 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.82 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 87.7 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.66 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 87.41 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 87.34 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 87.26 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 87.18 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 87.04 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 86.92 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 86.69 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 86.68 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 86.27 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 86.11 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 85.94 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 85.83 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 85.67 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.42 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 85.33 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 84.95 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 84.37 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 84.15 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 84.03 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 83.3 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 83.18 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 83.16 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 82.93 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 82.86 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 82.83 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.68 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 82.45 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 81.45 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 81.39 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 81.06 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 80.32 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 80.19 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 80.07 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=1.8e-19 Score=163.61 Aligned_cols=145 Identities=21% Similarity=0.195 Sum_probs=101.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|++.|++ |++++|..+.. ...++...... ......+++++.+|+++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~---V~~~~r~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~~ 68 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSF-NTERVDHIYQD---------PHTCNPKFHLHYGDLSDTS 68 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------CCEEECCCCSSCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE---EEEEECCCccc-chhhHHHHHhh---------hhhcCCCeEEEEeecCCHH
Confidence 78999999999999999999999877 99999864321 11222221110 0122368999999999876
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc-----------------eEEEEeCC--cccCCCC
Q psy14522 210 LGLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG-----------------SFVHVSTA--YTHCPRQ 265 (298)
Q Consensus 210 ~gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------~~v~iSS~--~~~~~~~ 265 (298)
.+.+++++ +|+|||+||..+.. .+....+++|+.| +|||+||. |+.....
T Consensus 69 ------~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~ 142 (357)
T d1db3a_ 69 ------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI 142 (357)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS
T ss_pred ------HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCC
Confidence 78888874 59999999986533 4455677888876 69999996 4444556
Q ss_pred CccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++|+.+..|.++ |..+|+.+|+++...
T Consensus 143 ~~~E~~~~~P~~~---Y~~sK~~~E~~~~~~ 170 (357)
T d1db3a_ 143 PQKETTPFYPRSP---YAVAKLYAYWITVNY 170 (357)
T ss_dssp SBCTTSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCCh---HHHHHHHHHHHHHHH
Confidence 8999987777655 677889999998764
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.73 E-value=6.4e-18 Score=152.26 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=100.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccch-hHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTV-SERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|.|||||||||||++|+++|+++|++ |++++|....... ..+.... ...+++++.+|+++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~---V~~~d~~~~~~~~~~~~~~~~---------------~~~~v~~~~~Dl~d~ 63 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLEVL---------------TKHHIPFYEVDLCDR 63 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHHHH---------------HTSCCCEEECCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCe---EEEEECCCCcchhHHHhHHhh---------------cccCCeEEEeecCCH
Confidence 67999999999999999999999877 8888765432211 1111111 125789999999986
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccCC------
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHCP------ 263 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~------ 263 (298)
. .+..+.. ++|+|||+||..... ........+|+.| +|||+||+.+++.
T Consensus 64 ~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~ 137 (347)
T d1z45a2 64 K------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPN 137 (347)
T ss_dssp H------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTT
T ss_pred H------HHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCC
Confidence 5 6777665 799999999976432 3334566788777 8999999754432
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+++|+.+..|.+ .|..+|+.+|+++..+
T Consensus 138 ~~~~~e~~~~~p~~---~Y~~sK~~~E~~~~~~ 167 (347)
T d1z45a2 138 MIPIPEECPLGPTN---PYGHTKYAIENILNDL 167 (347)
T ss_dssp CCSBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred CCccccccCCCCCC---hhHhHHHHHHHHHHHH
Confidence 23566766666655 4777899999988654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=1.1e-17 Score=150.35 Aligned_cols=139 Identities=22% Similarity=0.231 Sum_probs=97.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc-hhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT-VSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+|||||||||||++|++.|++.|++ |++++|...... ....++.. ...++.++++|+++.
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~---V~~~d~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~d~ 62 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERL---------------GGKHPTFVEGDIRNE 62 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHH---------------HTSCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHHhh---------------cCCCCEEEEeecCCH
Confidence 67999999999999999999999877 888877533221 11111111 125899999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
. .+.++++ ++|+|||+||..... .+....+++|+.| +||++||..++. ...+.
T Consensus 63 ~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~ 136 (338)
T d1udca_ 63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPY 136 (338)
T ss_dssp H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSB
T ss_pred H------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccc
Confidence 6 7877776 799999999976432 3445678889888 899999975443 33334
Q ss_pred cCcC-CCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 268 DEVF-YPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 268 ~E~~-~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.|.. ...|.++ |..+|..+|+++..
T Consensus 137 ~e~~~~~~p~~~---Y~~sK~~~e~~~~~ 162 (338)
T d1udca_ 137 VESFPTGTPQSP---YGKSKLMVEQILTD 162 (338)
T ss_dssp CTTSCCCCCSSH---HHHHHHHHHHHHHH
T ss_pred ccccccCCCcch---HHHHHhhhhHHHHH
Confidence 4433 3344454 56677888888764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.4e-17 Score=147.90 Aligned_cols=146 Identities=19% Similarity=0.196 Sum_probs=100.6
Q ss_pred cee-eecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 130 ASV-FVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 130 k~v-LVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
|+| ||||||||||++|+++|++.|++ |++++|..+... ..+++..... .......+++++.+|++++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~---V~~i~r~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~ 68 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFN-TGRIEHLYKN--------PQAHIEGNMKLHYGDLTDS 68 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTGGGC-----------------CEEEEECCTTCH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCE---EEEEECCCcccc-hhhHHHHhhc--------hhhhccCCcEEEEeecCCc
Confidence 456 99999999999999999999987 999998643211 0111110000 0011235789999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-----------------eEEEEeCC--cccCCC
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-----------------SFVHVSTA--YTHCPR 264 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------~~v~iSS~--~~~~~~ 264 (298)
. .+..++. ++++++|+|+..... .....++++|+.| +|||+||+ |+....
T Consensus 69 ~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~ 142 (347)
T d1t2aa_ 69 T------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE 142 (347)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS
T ss_pred h------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC
Confidence 6 6777665 578999999875432 3344556777776 69999997 444445
Q ss_pred CCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 265 QEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 265 ~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+++|+.+..|.++ |+.+|..+|+++...
T Consensus 143 ~~~~E~~~~~P~~~---Yg~sK~~aE~~~~~~ 171 (347)
T d1t2aa_ 143 IPQKETTPFYPRSP---YGAAKLYAYWIVVNF 171 (347)
T ss_dssp SSBCTTSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCH---HHHHHHHHHHHHHHH
Confidence 67899988777765 677789999998754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.69 E-value=2e-17 Score=148.83 Aligned_cols=148 Identities=21% Similarity=0.196 Sum_probs=104.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++|+|||||||||||++|+++|+++|++ |++++|+.+. ...+...... .........+.+|+.
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~---V~~~vR~~~~---~~~~~~~~~~----------~~~~~~~~~~~~Dl~ 72 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASK---LANLQKRWDA----------KYPGRFETAVVEDML 72 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH----------HSTTTEEEEECSCTT
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCchh---HHHHHHhhhc----------cccccccEEEecccc
Confidence 35899999999999999999999999977 8888986421 1222221110 011234456889999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------eEEEEeCCcccC---C---CC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------SFVHVSTAYTHC---P---RQ 265 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------~~v~iSS~~~~~---~---~~ 265 (298)
+.. .+..++.++|+|+|+|+...+..+...++.+|+.| +|||+||+.+.. + ..
T Consensus 73 ~~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~ 146 (342)
T d1y1pa1 73 KQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGI 146 (342)
T ss_dssp STT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred chh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCc
Confidence 876 57777889999999999988777777777778776 899999963321 1 11
Q ss_pred CccCcC-------------CCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 266 EIDEVF-------------YPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 266 ~~~E~~-------------~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...|+. ...|..+...|..+|+.+|+++...
T Consensus 147 ~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~ 190 (342)
T d1y1pa1 147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190 (342)
T ss_dssp EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHh
Confidence 222321 1235567888999999999976543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.67 E-value=3.2e-17 Score=148.78 Aligned_cols=144 Identities=19% Similarity=0.248 Sum_probs=95.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|++.|+++ |+++++...... ..++... ....+++++.+|++++.
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~d~~ 63 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGN-LESLSDI--------------SESNRYNFEHADICDSA 63 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCC-GGGGTTT--------------TTCTTEEEEECCTTCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCcccc-HHHHHhh--------------hhcCCcEEEEccCCCHH
Confidence 689999999999999999999998763 566655432111 1111110 12368999999999876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-----------------------eEEEEeCCccc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-----------------------SFVHVSTAYTH 261 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-----------------------~~v~iSS~~~~ 261 (298)
.+..+++ ++|+|||+||..... .+....+++|+.| +|||+||..++
T Consensus 64 ------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (361)
T d1kewa_ 64 ------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVY 137 (361)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGG
T ss_pred ------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceee
Confidence 6777665 589999999976532 2334566777766 69999997554
Q ss_pred CCC--CCccCcCC-------CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPR--QEIDEVFY-------PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~--~~~~E~~~-------~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.. .+..|... ..+..|...|+.+|.++|+++...
T Consensus 138 g~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~ 181 (361)
T d1kewa_ 138 GDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181 (361)
T ss_dssp CCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 322 22212111 122344556888899999998754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.4e-17 Score=148.12 Aligned_cols=138 Identities=18% Similarity=0.217 Sum_probs=96.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||++|+++|+++|++ |++++|...... +.+.. .....++.....|+.+.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~--~~~~~--------------~~~~~~~d~~~~~~~~~ 61 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNVEH--------------WIGHENFELINHDVVEP 61 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GGTGG--------------GTTCTTEEEEECCTTSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCCcCCH--HHHHH--------------hcCCCceEEEehHHHHH
Confidence 478999999999999999999999877 888876432211 01000 01124566666666544
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCccc--CCCCCccCc
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYTH--CPRQEIDEV 270 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~~--~~~~~~~E~ 270 (298)
. +.++|+|||+||.... ..+....+++|+.| ++||+||..++ ....++.|+
T Consensus 62 ~-----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~ 130 (312)
T d2b69a1 62 L-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSED 130 (312)
T ss_dssp C-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTT
T ss_pred H-----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCcc
Confidence 3 3479999999997653 24556677888887 99999997444 444566776
Q ss_pred CCC--CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYP--PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~--~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
... .|..|...|..+|.++|.+++..
T Consensus 131 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 158 (312)
T d2b69a1 131 YWGHVNPIGPRACYDEGKRVAETMCYAY 158 (312)
T ss_dssp CCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 432 35567788999999999998754
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.67 E-value=1.7e-16 Score=142.31 Aligned_cols=147 Identities=22% Similarity=0.189 Sum_probs=107.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc-chhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK-TVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~-~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
...|+|||||||||||++|+++|++.|++ |++++|..... ....++..... .....+++++.+|+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~d~ 79 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGHQRNLDEVRSLVS-----------EKQWSNFKFIQGDI 79 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCHHHHHHHHHHSC-----------HHHHTTEEEEECCT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHHHhhh-----------hcccCCeeEEeecc
Confidence 35689999999999999999999999887 88888754322 11222221111 01226789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcccCc---cccHHHHhhccccc--------------eEEEEeCCc--ccCCCCC
Q psy14522 206 SLPGLGLSAADRAVLRRNVTVVFHGAATVRF---DENIKVAIAINIFG--------------SFVHVSTAY--THCPRQE 266 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g--------------~~v~iSS~~--~~~~~~~ 266 (298)
.+.. .........+.++|+++.... ..+....+++|+.| +|||+||.. +.....+
T Consensus 80 ~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~ 153 (341)
T d1sb8a_ 80 RNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP 153 (341)
T ss_dssp TSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS
T ss_pred cccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCC
Confidence 8865 677777789999999986543 24445567788887 999999974 4445567
Q ss_pred ccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.|+.+..|.++ |..+|+.+|+++..+
T Consensus 154 ~~E~~~~~p~~~---Y~~sK~~~E~~~~~~ 180 (341)
T d1sb8a_ 154 KVEDTIGKPLSP---YAVTKYVNELYADVF 180 (341)
T ss_dssp BCTTCCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCc---chHHHHHHHHHHHHH
Confidence 899888777665 677889999998754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.65 E-value=1.3e-16 Score=144.22 Aligned_cols=136 Identities=17% Similarity=0.127 Sum_probs=96.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+|||||||||||++|+++|+++|++ |++++|...... ........+..+|+.+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~---------------------~~~~~~~~~~~~D~~~ 69 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHM---------------------TEDMFCDEFHLVDLRV 69 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSS---------------------CGGGTCSEEEECCTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCCccch---------------------hhhcccCcEEEeechh
Confidence 5889999999999999999999999877 888877543211 1112456788889887
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCc----cccHHHHhhccccc--------------eEEEEeCCcccC--CCCCc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRF----DENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQEI 267 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~----~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~~ 267 (298)
.. .+..+.+++|+|||+|+.... ..........|+.| +|||+||...++ ...+.
T Consensus 70 ~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~ 143 (363)
T d2c5aa1 70 ME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLET 143 (363)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSS
T ss_pred HH------HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccc
Confidence 65 677778899999999987654 34455566667766 899999975443 22222
Q ss_pred -------cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 -------DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 -------~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.|..+..|.+ .|..+|..+|++++..
T Consensus 144 ~~~~~~~~e~~~~~p~~---~Yg~sK~~~E~~~~~~ 176 (363)
T d2c5aa1 144 TNVSLKESDAWPAEPQD---AFGLEKLATEELCKHY 176 (363)
T ss_dssp SSCEECGGGGSSBCCSS---HHHHHHHHHHHHHHHH
T ss_pred cccccccccCCcCCCCC---HHHHHHHHHHHHHHHH
Confidence 2333334444 4677889999988753
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=3.4e-16 Score=140.23 Aligned_cols=140 Identities=21% Similarity=0.216 Sum_probs=98.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|+++|+. +|+++++...... ++ ....+++++.+|+++..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~--~V~~ld~~~~~~~---~~-----------------~~~~~~~~i~~Di~~~~ 58 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAIS---RF-----------------LNHPHFHFVEGDISIHS 58 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGGG---GG-----------------TTCTTEEEEECCTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCCcchh---hh-----------------ccCCCeEEEECccCChH
Confidence 68999999999999999999999742 4888877543211 10 11368999999999875
Q ss_pred CCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcc--cCCCCCccCcC
Q psy14522 210 LGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYT--HCPRQEIDEVF 271 (298)
Q Consensus 210 ~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~--~~~~~~~~E~~ 271 (298)
+..+.+.+++|+|||+|+..... ......+.+|+.| +++|+||... ........|..
T Consensus 59 -----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~ 133 (342)
T d2blla1 59 -----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDH 133 (342)
T ss_dssp -----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTT
T ss_pred -----HHHHHHHhCCCccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 13344667899999999986543 3334567788888 7888888643 33333333332
Q ss_pred C----CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 272 Y----PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 272 ~----~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. .++..+...|..+|..+|+++...
T Consensus 134 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 162 (342)
T d2blla1 134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (342)
T ss_dssp CCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCcchhhhcccchhhhhhhh
Confidence 2 233456778999999999998754
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=3.7e-16 Score=138.55 Aligned_cols=140 Identities=22% Similarity=0.135 Sum_probs=101.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|+++|++ |++++|...... ..++... ....+++++.+|+.+..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~---V~~~~r~~~~~~-~~~l~~~--------------~~~~~~~~~~~Dl~d~~ 62 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLREL--------------GIEGDIQYEDGDMADAC 62 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHHT--------------TCGGGEEEEECCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCccc-HHHHHHh--------------cccCCcEEEEccccChH
Confidence 68999999999999999999999987 899998754322 2344332 12257899999999875
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCC--cccCCCCCc
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTA--YTHCPRQEI 267 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~--~~~~~~~~~ 267 (298)
.+..... ..++++|+|+..... .+...++..|+.| +|++.||. |+.......
T Consensus 63 ------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~ 136 (321)
T d1rpna_ 63 ------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ 136 (321)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSB
T ss_pred ------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCC
Confidence 5555544 467999998875432 4455667778876 78888886 333444567
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.++ |..+|.++|+++...
T Consensus 137 ~E~~~~~p~~~---Y~~sK~~~E~~~~~~ 162 (321)
T d1rpna_ 137 DENTPFYPRSP---YGVAKLYGHWITVNY 162 (321)
T ss_dssp CTTSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred CCCCCccccCh---hHHHHHHHHHHHHHH
Confidence 78887777766 567778899887654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.62 E-value=5.8e-16 Score=138.20 Aligned_cols=147 Identities=16% Similarity=0.098 Sum_probs=97.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|++||||||||||+||+++|+++|++ |++++|..+... .+++...... ........+.++.+|+.+.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~---V~~~~r~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~Di~~~ 68 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFN-TQRINHIYID--------PHNVNKALMKLHYADLTDA 68 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTTTTC----------------CCEEEEECCTTCH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCE---EEEEECCCcccc-hhhhhhhhhh--------hhhccccceEEEEccccCH
Confidence 478999999999999999999999987 999998643110 0111100000 0001125688999999886
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------------eEEEEeCCcccCC-
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------------SFVHVSTAYTHCP- 263 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------------~~v~iSS~~~~~~- 263 (298)
. .+...++ ++|+|||+|+..... ......+..|+.| ++++.||.+....
T Consensus 69 ~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~ 142 (339)
T d1n7ha_ 69 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST 142 (339)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS
T ss_pred H------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC
Confidence 5 5666554 689999999986543 2333455666555 5677777755443
Q ss_pred CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+++|+.+..|.+. |..+|+.+|+++...
T Consensus 143 ~~~~~E~~~~~p~~~---Y~~sK~~~E~~~~~~ 172 (339)
T d1n7ha_ 143 PPPQSETTPFHPRSP---YAASKCAAHWYTVNY 172 (339)
T ss_dssp CSSBCTTSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcch---hhHHHHHHHHHHHHH
Confidence 346788887777665 556789999987654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.62 E-value=5.3e-16 Score=138.08 Aligned_cols=143 Identities=24% Similarity=0.239 Sum_probs=102.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcc---eEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLE---RVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~---~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
|+|||||||||||++|++.|+++|++|. +|+.+++....... ..+. . .....++.++.+|+.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~~------------~--~~~~~~~~~~~~d~~ 65 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA------------P--VDADPRLRFVHGDIR 65 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG------------G--GTTCTTEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHhh------------h--hhcCCCeEEEEeccc
Confidence 6899999999999999999999998753 45665543221110 0000 0 012368999999998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCccc--CCCCCc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTH--CPRQEI 267 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~--~~~~~~ 267 (298)
+.. ........+|.|+|+|+..... ......+++|+.| +|||+||..++ ....++
T Consensus 66 ~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~ 139 (322)
T d1r6da_ 66 DAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSW 139 (322)
T ss_dssp CHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCB
T ss_pred cch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCC
Confidence 865 5667778899999999875432 3445566778777 89999997444 445678
Q ss_pred cCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 268 DEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 268 ~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+|+.+..|.++ |..+|..+|.+++..
T Consensus 140 ~E~~~~~p~~~---Y~~sK~~~E~~~~~~ 165 (322)
T d1r6da_ 140 TESSPLEPNSP---YAASKAGSDLVARAY 165 (322)
T ss_dssp CTTSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH---HHHHHHHHHHHHHHH
Confidence 89888777765 567789999998764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=5e-16 Score=132.27 Aligned_cols=128 Identities=19% Similarity=0.149 Sum_probs=97.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+|||||||||||++++++|+++|. +.+|++++|++.... .....++....+|+.
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~-~~~v~~~~R~~~~~~---------------------~~~~~~i~~~~~D~~ 69 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGL-FSKVTLIGRRKLTFD---------------------EEAYKNVNQEVVDFE 69 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTC-CSEEEEEESSCCCCC---------------------SGGGGGCEEEECCGG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-CCEEEEEecChhhhc---------------------ccccceeeeeeeccc
Confidence 5678999999999999999999999974 467999999754321 112257788888988
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFY 272 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~ 272 (298)
+.+ .+...++++|++||++|......+...+.++|+.+ +|||+||......
T Consensus 70 ~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~--------- 134 (232)
T d2bkaa1 70 KLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------- 134 (232)
T ss_dssp GGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT---------
T ss_pred ccc------cccccccccccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccC---------
Confidence 765 67788889999999999876555556666777666 8999999865321
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 273 PPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 273 ~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+. +.|..+|+.+|+.+.+.
T Consensus 135 --~~---~~Y~~~K~~~E~~l~~~ 153 (232)
T d2bkaa1 135 --SN---FLYLQVKGEVEAKVEEL 153 (232)
T ss_dssp --CS---SHHHHHHHHHHHHHHTT
T ss_pred --cc---chhHHHHHHhhhccccc
Confidence 12 24678899999998764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2e-15 Score=135.47 Aligned_cols=144 Identities=17% Similarity=0.133 Sum_probs=93.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc----cchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG----KTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~----~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.|+|||||||||||++|+++|++.|++ |++++|.... .....++..... ....++.++.+|
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~---V~~ld~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D 66 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQE------------LTGRSVEFEEMD 66 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHHH------------HHTCCCEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCCccccccccchHHHHHHHH------------hcCCCcEEEEee
Confidence 378999999999999999999999987 7777642211 111112211110 012689999999
Q ss_pred CCCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcccCC--
Q psy14522 205 VSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYTHCP-- 263 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~-- 263 (298)
+++.. .+..... .+++++|+||..+.. ......+++|+.| +|+|+||+...+.
T Consensus 67 l~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~ 140 (346)
T d1ek6a_ 67 ILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ 140 (346)
T ss_dssp TTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCS
T ss_pred ccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccc
Confidence 99876 6666554 467899999976533 2344567788877 8999999744332
Q ss_pred CCCcc-CcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 RQEID-EVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 ~~~~~-E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..... +.....+.++ |..+|+.+|+.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~---Y~~~k~~~e~~~~~~ 171 (346)
T d1ek6a_ 141 YLPLDEAHPTGGCTNP---YGKSKFFIEEMIRDL 171 (346)
T ss_dssp SSSBCTTSCCCCCSSH---HHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCh---HHHHHHHHHHHHHHH
Confidence 22222 2222334444 667788899887653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.59 E-value=4.2e-16 Score=142.42 Aligned_cols=147 Identities=18% Similarity=0.176 Sum_probs=92.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC--------------CCccchhHHHHHHHHHHHHhhhhhcCccc
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP--------------KKGKTVSERLDELFEDRLFSRLKAEVPHF 194 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~--------------~~~~~~~~rl~~~~~~~~~~~l~~~~~~~ 194 (298)
||+|||||||||||++|+++|++.|++ |++++.- ........++..... ..
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~---V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 65 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA------------LT 65 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH------------HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEecCCcccccccccccccccccchHHHHHHHHh------------hc
Confidence 689999999999999999999999987 7776410 011111111111100 11
Q ss_pred cCCeEEEecCCCCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc------ccHHHHhhccccc---------------e
Q psy14522 195 RSKISVVTGDVSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD------ENIKVAIAINIFG---------------S 251 (298)
Q Consensus 195 ~~~v~~v~~Dl~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~------~~~~~~~~~Nv~g---------------~ 251 (298)
..+++++.+|+++.+ .+..+++ ++|+|||+||..... ......+.+|+.| +
T Consensus 66 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~ 139 (393)
T d1i24a_ 66 GKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECH 139 (393)
T ss_dssp CCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccc
Confidence 268999999999876 6777776 579999999975432 1123456778877 5
Q ss_pred EEEEeCCcccCCC-CCccC-------c----CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 252 FVHVSTAYTHCPR-QEIDE-------V----FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 252 ~v~iSS~~~~~~~-~~~~E-------~----~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+++.||...++.. .+..| + ....|..+...|..+|+.+|.++...
T Consensus 140 ~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~ 196 (393)
T d1i24a_ 140 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 196 (393)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccc
Confidence 6777775333211 11111 1 11123344456888899999998654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.59 E-value=5.7e-16 Score=139.22 Aligned_cols=142 Identities=21% Similarity=0.259 Sum_probs=97.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||++|+++|++.|++| +|+++++...... ..++ ......+++++.+|+.+.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~-~~~~---------------~~~~~~~i~~~~~Di~d~ 64 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGN-KANL---------------EAILGDRVELVVGDIADA 64 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCC-GGGT---------------GGGCSSSEEEEECCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCcccc-HHHH---------------HHhhcCCeEEEEccCCCH
Confidence 4789999999999999999999999873 3444443221100 0010 011236899999999887
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcccCC---------
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYTHCP--------- 263 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~~~~--------- 263 (298)
. .+..++...+.|+|+|+..... .+...++++|+.| ++|++||...++.
T Consensus 65 ~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~ 138 (346)
T d1oc2a_ 65 E------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPG 138 (346)
T ss_dssp H------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTT
T ss_pred H------HHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccc
Confidence 6 7888999999999999976532 3445677888888 8999988643321
Q ss_pred -----CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 264 -----RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 264 -----~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
...+.|..+..|.+ .|..+|..+|++++..
T Consensus 139 ~~~~~~~~~~e~~~~~p~s---~Y~~sK~~~E~~~~~~ 173 (346)
T d1oc2a_ 139 HGEGPGEKFTAETNYNPSS---PYSSTKAASDLIVKAW 173 (346)
T ss_dssp TTCSTTSSBCTTSCCCCCS---HHHHHHHHHHHHHHHH
T ss_pred cccCcccccccCCCCCCCC---HHHHHHHHHHHHHHHH
Confidence 11334444444544 5777889999998754
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=1.3e-15 Score=134.73 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=87.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||++|+++|+++|+. |+++.+.. ..|+.+.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~---vi~~~~~~-----------------------------------~~~~~~~ 43 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD-----------------------------------ELNLLDS 43 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT-----------------------------------TCCTTCH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCE---EEEecCch-----------------------------------hccccCH
Confidence 578999999999999999999999865 55544321 1345443
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCcccCcc----ccHHHHhhccccc--------------eEEEEeCCcccC--CCCC
Q psy14522 209 GLGLSAADRAVLRR--NVTVVFHGAATVRFD----ENIKVAIAINIFG--------------SFVHVSTAYTHC--PRQE 266 (298)
Q Consensus 209 ~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~----~~~~~~~~~Nv~g--------------~~v~iSS~~~~~--~~~~ 266 (298)
. .+..++. .+|.|+|+|+.+... .+..+++..|+.| +|||+||+.+++ ...+
T Consensus 44 ~------~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~ 117 (315)
T d1e6ua_ 44 R------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 117 (315)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS
T ss_pred H------HHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCC
Confidence 3 4555544 589999999876532 3445566778877 899999975544 3456
Q ss_pred ccCcCCCC--CCChHHHHHHHHHHHHHHHhhh
Q psy14522 267 IDEVFYPP--PYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 267 ~~E~~~~~--p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.|+.+.. +..+...|..+|..+|+++..+
T Consensus 118 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 149 (315)
T d1e6ua_ 118 MAESELLQGTLEPTNEPYAIAKIAGIKLCESY 149 (315)
T ss_dssp BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred ccCCccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 77776543 2334457999999999998764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.58 E-value=2.2e-15 Score=135.29 Aligned_cols=142 Identities=20% Similarity=0.133 Sum_probs=96.7
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
.|+++|+|||||||||||++|++.|++.|++ |+.++|........ +.. ....++++++.+|
T Consensus 4 ~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~---V~~~~r~~~~~~~~--~~~--------------~~~~~~i~~~~~D 64 (356)
T d1rkxa_ 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPSL--FET--------------ARVADGMQSEIGD 64 (356)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSCH--HHH--------------TTTTTTSEEEECC
T ss_pred hhhCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCccHHH--Hhh--------------hhcccCCeEEEee
Confidence 4678999999999999999999999999977 88999875532211 110 0123579999999
Q ss_pred CCCCCCCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc---------------eEEEEeCCcccC--
Q psy14522 205 VSLPGLGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG---------------SFVHVSTAYTHC-- 262 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g---------------~~v~iSS~~~~~-- 262 (298)
++++. .+.++.. .+|+|+|+|+..... .....++.+|+.| .+++.||.....
T Consensus 65 l~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~ 138 (356)
T d1rkxa_ 65 IRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK 138 (356)
T ss_dssp TTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC
T ss_pred ccChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccc
Confidence 99876 6666655 579999999976432 3445567778777 455555543322
Q ss_pred -CCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 263 -PRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 263 -~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
...+..|+.+..|.++|+.+ |..+|..+.
T Consensus 139 ~~~~~~~~~~~~~p~~~y~~~---k~~~e~~~~ 168 (356)
T d1rkxa_ 139 EWIWGYRENEAMGGYDPYSNS---KGCAELVTS 168 (356)
T ss_dssp CSSSCBCTTSCBCCSSHHHHH---HHHHHHHHH
T ss_pred ccccccccccccCCCCccccc---cccchhhhh
Confidence 22355666666677766554 455554443
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.55 E-value=6.9e-15 Score=130.50 Aligned_cols=96 Identities=24% Similarity=0.334 Sum_probs=70.5
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|||||||||||++|+++|+++|++ |+++++-... ....++.... ...+++++.+|+++.+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~---V~~id~~~~~-~~~~~~~~~~--------------~~~~~~~i~~Di~~~~- 62 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRK-GATDNLHWLS--------------SLGNFEFVHGDIRNKN- 62 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCST-THHHHHHHHH--------------TTCCCEEEECCTTCHH-
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCCcc-cchhHHHHhh--------------ccCCcEEEEcccCCHH-
Confidence 6999999999999999999999877 8887653221 1222222221 1268999999999876
Q ss_pred CCCHHHHHHHhcC--ccEEEEcCcccCcc---ccHHHHhhccccc
Q psy14522 211 GLSAADRAVLRRN--VTVVFHGAATVRFD---ENIKVAIAINIFG 250 (298)
Q Consensus 211 gl~~~~~~~l~~~--vd~Vih~A~~~~~~---~~~~~~~~~Nv~g 250 (298)
.+..++++ +|+|||+|+.+... .+...++++|+.|
T Consensus 63 -----~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~g 102 (338)
T d1orra_ 63 -----DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG 102 (338)
T ss_dssp -----HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHH
T ss_pred -----HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHH
Confidence 67777664 69999999987643 2445677888887
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.53 E-value=1.3e-14 Score=131.86 Aligned_cols=151 Identities=17% Similarity=0.170 Sum_probs=94.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHh-CCCcceEEEecC---CCCcc---chhHHHHHHHHHHHHhhhhhc-CccccCCeEE
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVR---PKKGK---TVSERLDELFEDRLFSRLKAE-VPHFRSKISV 200 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R---~~~~~---~~~~rl~~~~~~~~~~~l~~~-~~~~~~~v~~ 200 (298)
.|+|||||||||||++|+++|+++ |++ |+++++ ..... ...++....+. ..... ......++.+
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~---V~~~D~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 73 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---VVIVDSLVGTHGKSDHVETRENVARKLQ-----QSDGPKPPWADRYAAL 73 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE---EEEEECCTTTTTCCTTSCCHHHHHHHHH-----HSCSSCCTTTTCCCEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCE---EEEEecCCcccccchhhhhhhhHHHHhh-----hhccccccccccceEE
Confidence 589999999999999999999975 455 888754 21111 11111111111 11111 1122357889
Q ss_pred EecCCCCCCCCCCHHHHHHHhc---CccEEEEcCcccCcc---ccHHHHhhccccc--------------eEEEEeCCcc
Q psy14522 201 VTGDVSLPGLGLSAADRAVLRR---NVTVVFHGAATVRFD---ENIKVAIAINIFG--------------SFVHVSTAYT 260 (298)
Q Consensus 201 v~~Dl~~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g--------------~~v~iSS~~~ 260 (298)
+.+|+++.. .+.++++ ++|+|||+|+..... ......+++|+.+ +++++||...
T Consensus 74 ~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 74 EVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAI 147 (383)
T ss_dssp EESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred EECcccCHH------HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccc
Confidence 999999876 5666654 679999999976533 2334455667766 7888877643
Q ss_pred cC--C-------CCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 261 HC--P-------RQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 261 ~~--~-------~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. . ..++.|+.+..|.+ .|..+|+.+|+++...
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~~~~p~~---~Y~~sK~~~e~~~~~~ 189 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINAKKSPES---PYGESKLIAERMIRDC 189 (383)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCSS---HHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCCCCCC---HHHhhHhHHHHHHHHH
Confidence 32 1 12355555555555 4677889999998754
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.51 E-value=3e-14 Score=123.30 Aligned_cols=135 Identities=14% Similarity=0.101 Sum_probs=94.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ...+.+.+.+.. ....++.++.+|++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~---V~~~~r~~~--~~~~~~~~~~~~-----------~~g~~~~~~~~Dv~ 65 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDA--AEIEKVRAGLAA-----------QHGVKVLYDGADLS 65 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCH--HHHHHHHHHHHH-----------HHTSCEEEECCCTT
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCcH--HHHHHHHHHHHH-----------hcCCcEEEEECCCC
Confidence 57999999999999999999999999976 888888642 112222222211 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ +++.++ .++|++|||||.... ...|...+++|+.| ++|+
T Consensus 66 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~ 139 (260)
T d1x1ta1 66 KGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEee
Confidence 865 444443 479999999997532 14567788999988 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+.... ..+..|..+|+.-+.+.+.
T Consensus 140 isS~~~~~~~------------~~~~~Y~asKaal~~lt~~ 168 (260)
T d1x1ta1 140 IASAHGLVAS------------ANKSAYVAAKHGVVGFTKV 168 (260)
T ss_dssp ECCGGGTSCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred cccccceecc------------CCcchhhhhhhhHHHhHHH
Confidence 9998765321 1234566666666655543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.50 E-value=2.8e-14 Score=122.38 Aligned_cols=131 Identities=13% Similarity=0.104 Sum_probs=94.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ++++... +...+..++.+|++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~ 62 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILDE------EGKAMAA------------ELADAARYVHLDVT 62 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------HTGGGEEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhhCcceEEEeecC
Confidence 57999999999999999999999999976 888888632 2322221 12256788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .++++ +.++|++|||||..... ..|...+++|+.| ++|+
T Consensus 63 ~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~ 136 (244)
T d1nffa_ 63 QPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIIN 136 (244)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEe
Confidence 875 33333 34799999999975421 4567788999998 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+||+.+... ...+..|..+|+.-+.+.+.+
T Consensus 137 isS~~~~~~------------~~~~~~Y~asKaal~~ltk~l 166 (244)
T d1nffa_ 137 ISSIEGLAG------------TVACHGYTATKFAVRGLTKST 166 (244)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ccccccccc------------cccccchhhHHHHHHHHHHHH
Confidence 999876432 112445677777666665543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3e-14 Score=118.71 Aligned_cols=130 Identities=20% Similarity=0.061 Sum_probs=90.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+|+||||||++|++++++|+++|++ |.++.|+..... .....+++++.+|+.+
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~---V~~~~R~~~~~~---------------------~~~~~~~~~~~gD~~d 57 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQ 57 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSC---------------------SSSCCCSEEEESCTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEEcChhhcc---------------------cccccccccccccccc
Confidence 4678999999999999999999999876 999999754211 1122578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccH--HHHhhccccc--------eEEEEeCCcccCCCCCccCcCCCCCCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENI--KVAIAINIFG--------SFVHVSTAYTHCPRQEIDEVFYPPPYD 277 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~--~~~~~~Nv~g--------~~v~iSS~~~~~~~~~~~E~~~~~p~~ 277 (298)
.. .+.+.++++|+|||++|........ ......|+.- +||++||.....+.. ....
T Consensus 58 ~~------~l~~al~~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~--------~~~~ 123 (205)
T d1hdoa_ 58 AA------DVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT--------KVPP 123 (205)
T ss_dssp HH------HHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT--------CSCG
T ss_pred hh------hHHHHhcCCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCc--------cccc
Confidence 76 7888899999999999875422111 1111112111 999999975543211 1112
Q ss_pred hHHHHHHHHHHHHHHHhh
Q psy14522 278 YKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 278 ~y~~yk~sK~~aE~~l~~ 295 (298)
....|...|+.+|+++++
T Consensus 124 ~~~~~~~~~~~~e~~l~~ 141 (205)
T d1hdoa_ 124 RLQAVTDDHIRMHKVLRE 141 (205)
T ss_dssp GGHHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHh
Confidence 345677788999998875
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=3.8e-14 Score=121.90 Aligned_cols=128 Identities=18% Similarity=0.197 Sum_probs=91.1
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
++++|++|||||+++||+++++.|+++|++ |++..|+.... + +.+. .+..++.+|+
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~---V~~~~~~~~~~---~-~~~~-----------------~~~~~~~~Dv 57 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGAL---VALCDLRPEGK---E-VAEA-----------------IGGAFFQVDL 57 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTHH---H-HHHH-----------------HTCEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH---H-HHHH-----------------cCCeEEEEeC
Confidence 367999999999999999999999999976 88888875321 1 1111 1345788999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
++++ +++++ +.++|++|||||..... ..|+..+++|+.| ++|
T Consensus 58 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii 131 (248)
T d2d1ya1 58 EDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV 131 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccc
Confidence 9865 33333 34799999999975321 4567788999988 999
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|+.-+.+.+.
T Consensus 132 ~isS~~~~~~------------~~~~~~Y~asKaal~~ltk~ 161 (248)
T d2d1ya1 132 NVASVQGLFA------------EQENAAYNASKGGLVNLTRS 161 (248)
T ss_dssp EECCGGGTSB------------CTTBHHHHHHHHHHHHHHHH
T ss_pred cccccccccc------------ccccchhHHHHHHHHHHHHH
Confidence 9999876432 11245566677766665543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.49 E-value=6.8e-14 Score=120.67 Aligned_cols=130 Identities=18% Similarity=0.119 Sum_probs=93.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||++.||+++++.|+++|.+ |++..|+. +++.+..+ +...++.++.+|++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~------~~~~~~~~------------~~~~~~~~~~~Dv~ 61 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGAR---VVLADVLD------EEGAATAR------------ELGDAARYQHLDVT 61 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH------------TTGGGEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH------------HhCCceEEEEcccC
Confidence 57999999999999999999999999876 88888863 23332222 22357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ +++++ +.++|++|||||..... ..|...+++|+.| ++|+
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~ 135 (254)
T d1hdca_ 62 IEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN 135 (254)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecc
Confidence 865 44443 34799999999975321 4566788999988 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... ...+..|..+|..-+.+.+.
T Consensus 136 isS~~~~~~------------~~~~~~Y~asKaal~~lt~~ 164 (254)
T d1hdca_ 136 ISSAAGLMG------------LALTSSYGASKWGVRGLSKL 164 (254)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cccchhccc------------ccchhhHHHHHHHHHHHHHH
Confidence 999876432 11234566666665555443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.49 E-value=3.7e-14 Score=121.18 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=89.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+... ..++..+.+|+
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--------------------------~~~~~~~~~Dv 54 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHK---VAVTHRGSGA--------------------------PKGLFGVEVDV 54 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSSCC--------------------------CTTSEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCcch--------------------------hcCceEEEEec
Confidence 368999999999999999999999999976 8888887542 14677899999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++++ +++++ +.++|++|||||.... .+.|+..+++|+.+ ++|
T Consensus 55 ~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv 128 (237)
T d1uzma1 55 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 128 (237)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceE
Confidence 9865 33333 3479999999997531 24667788999998 999
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++||+.+.... | .+..|..+|..-+.+.+
T Consensus 129 ~isS~~~~~~~----------~--~~~~Y~asKaal~~lt~ 157 (237)
T d1uzma1 129 FIGSVSGLWGI----------G--NQANYAASKAGVIGMAR 157 (237)
T ss_dssp EECCCCC-----------------CCHHHHHHHHHHHHHHH
T ss_pred EEcchhhccCC----------c--ccHHHHHHHHHHHHHHH
Confidence 99998764321 1 23456666665555544
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=6.3e-14 Score=120.19 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=95.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.||+++||||+++||++++++|+++|.+ |++.+|+.. ..+.+.+.+. ....++..+.+|++
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~---V~l~~r~~~---~l~~~~~~~~------------~~~~~~~~~~~Dvs 66 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSK---LVLWDINKH---GLEETAAKCK------------GLGAKVHTFVVDCS 66 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEeeCC
Confidence 57999999999999999999999999976 898998632 1222222221 12357899999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .+..+ ...+|++|||||..... ..++..+++|+.| ++|+
T Consensus 67 ~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~ 140 (244)
T d1yb1a_ 67 NRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVT 140 (244)
T ss_dssp CHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEE
Confidence 975 33333 34699999999986422 3456788999998 8999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||..+.. |...+..|..+|+.-+.+.+.
T Consensus 141 isS~~~~~------------~~~~~~~Y~asKaal~~~~~~ 169 (244)
T d1yb1a_ 141 VASAAGHV------------SVPFLLAYCSSKFAAVGFHKT 169 (244)
T ss_dssp ECCCC-CC------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred eecchhcC------------CCCCcHHHHHHHHHHHHHHHH
Confidence 99987642 222356677777766655543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=3.3e-14 Score=121.89 Aligned_cols=130 Identities=12% Similarity=0.130 Sum_probs=91.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+++||+++++.|+++|++ |++..|+.. ..+.+.+.+ ..+...+.+|++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~---Vv~~~r~~~---~l~~~~~~~---------------~~~~~~~~~Dv~ 60 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAK---VIGTATSEN---GAQAISDYL---------------GANGKGLMLNVT 60 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHH---HHHHHHHHH---------------GGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCHH---HHHHHHHHh---------------CCCCcEEEEEec
Confidence 47899999999999999999999999977 888888632 122222211 246788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .++++ +.++|++|||||..... ..|...+++|+.| ++|+
T Consensus 61 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~ 134 (243)
T d1q7ba_ 61 DPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT 134 (243)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeee
Confidence 865 34333 34799999999975321 4566778999988 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+.... | .+..|..+|..-+.+.+.
T Consensus 135 isS~~~~~~~----------~--~~~~Y~asKaal~~lt~~ 163 (243)
T d1q7ba_ 135 IGSVVGTMGN----------G--GQANYAAAKAGLIGFSKS 163 (243)
T ss_dssp ECCHHHHHCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred ecchhhcCCC----------C--CCHHHHHHHHHHHHHHHH
Confidence 9998654221 1 234566666666665544
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.48 E-value=6.7e-14 Score=120.22 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=83.2
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|.... ..++..+ ....++.++.+|+
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~~-----~~~~~~~------------~~g~~~~~~~~Dv 61 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPAP-----EAEAAIR------------NLGRRVLTVKCDV 61 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCH-----HHHHHHH------------HTTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCchH-----HHHHHHH------------HcCCcEEEEEeeC
Confidence 367999999999999999999999999976 8888886531 1112111 1236788999999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
++++ +++.+ +.++|++|||||..... ..|...+++|+.| ++|
T Consensus 62 s~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv 135 (247)
T d2ew8a1 62 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII 135 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCcc
Confidence 9875 44443 34799999999975321 4667788999988 899
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||+.+.
T Consensus 136 ~isS~~~~ 143 (247)
T d2ew8a1 136 NLTSTTYW 143 (247)
T ss_dssp EECCGGGG
T ss_pred ccccchhc
Confidence 99998764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.48 E-value=1.9e-14 Score=125.29 Aligned_cols=122 Identities=22% Similarity=0.207 Sum_probs=84.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|++.|.+.|+ ++.+.+... .+.+|+++..
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~----~v~~~~~~~--------------------------------~~~~Dl~~~~ 44 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN----LIALDVHSK--------------------------------EFCGDFSNPK 44 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE----EEEECTTCS--------------------------------SSCCCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----EEEEECCCc--------------------------------cccCcCCCHH
Confidence 6799999999999999999998863 444444321 0246777654
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCc---cccHHHHhhccccc-------------eEEEEeCCcc--cCCCCCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRF---DENIKVAIAINIFG-------------SFVHVSTAYT--HCPRQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~---~~~~~~~~~~Nv~g-------------~~v~iSS~~~--~~~~~~~~E 269 (298)
.+.++++ ++|+|||+||.... .......+..|+.+ +++++||... .....++.|
T Consensus 45 ------~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E 118 (298)
T d1n2sa_ 45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQE 118 (298)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCT
T ss_pred ------HHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCcc
Confidence 6777665 56999999997643 23344455666665 8888888633 344557888
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+..|.+.| ..+|..+|+++...
T Consensus 119 ~~~~~p~~~y---~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 119 TDATSPLNVY---GKTKLAGEKALQDN 142 (298)
T ss_dssp TSCCCCSSHH---HHHHHHHHHHHHHH
T ss_pred ccccCCCchH---hhhhhhhhhhHHhh
Confidence 8877766655 45678888887653
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.48 E-value=6.2e-14 Score=121.06 Aligned_cols=130 Identities=13% Similarity=0.130 Sum_probs=93.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+. +++++... +...++.++.+|++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~------~~l~~~~~------------~~~~~~~~~~~Dvt 61 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGAR---VAIADINL------EAARATAA------------EIGPAACAIALDVT 61 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEE---EEEEESCH------HHHHHHHH------------HHCTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH------------HhCCceEEEEeeCC
Confidence 57899999999999999999999999866 88888853 22332222 12357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .+++++ .++|++|||||..... ..|...+++|+.| ++|
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv 135 (256)
T d1k2wa_ 62 DQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKII 135 (256)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccc
Confidence 875 444443 4799999999975421 4566778899988 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|..-+.+.+.
T Consensus 136 ~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~ 165 (256)
T d1k2wa_ 136 NMASQAGRRG------------EALVGVYCATKAAVISLTQS 165 (256)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cccchhhccc------------cccccchhhhhhHHHHHHHH
Confidence 9999876432 11234566666666655543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.47 E-value=9.5e-14 Score=120.23 Aligned_cols=134 Identities=18% Similarity=0.212 Sum_probs=93.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+++||+++++.|+++|.+ |++..|+.. ...+.+.+.+. ....++..+.+|++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~---Vv~~~r~~~--~~~~~~~~~~~------------~~g~~~~~~~~Dvt 67 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAK---VVVNYRSKE--DEANSVLEEIK------------KVGGEAIAVKGDVT 67 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcH--HHHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 67999999999999999999999999876 888888642 12222222222 12257888999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .++++ +.++|++|||||..... ..|...+++|+.| +++
T Consensus 68 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv 141 (261)
T d1geea_ 68 VES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVI 141 (261)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccccccc
Confidence 875 34433 34799999999975421 4567788999988 588
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|..-+.+.+.
T Consensus 142 ~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~ 171 (261)
T d1geea_ 142 NMSSVHEKIP------------WPLFVHYAASKGGMKLMTET 171 (261)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred ccccchhccc------------CccccccccCCccchhhHHH
Confidence 9999876432 11234566666666655543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.46 E-value=6.9e-14 Score=120.45 Aligned_cols=133 Identities=16% Similarity=0.184 Sum_probs=93.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||+++||+++++.|++.|.+ |++..|+.. ..+.+.+.++ ....++..+.+|++
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~---V~~~~r~~~---~l~~~~~~l~------------~~g~~~~~~~~Dvt 69 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSH---VICISRTQK---SCDSVVDEIK------------SFGYESSGYAGDVS 69 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSE---EEEEESSHH---HHHHHHHHHH------------TTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 46899999999999999999999999876 888888532 2222222221 22357889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ ++..++ .++|++||||+..... ..|...+++|+.| ++|+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVn 143 (251)
T d2c07a1 70 KKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIIN 143 (251)
T ss_dssp CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEE
Confidence 875 444433 4799999999975321 4667788999988 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+.... | .+..|..+|..-+.+.+.
T Consensus 144 isS~~~~~~~----------~--~~~~Y~asKaal~~ltr~ 172 (251)
T d2c07a1 144 ISSIVGLTGN----------V--GQANYSSSKAGVIGFTKS 172 (251)
T ss_dssp ECCTHHHHCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred ECCHHhcCCC----------C--CCHHHHHHHHHHHHHHHH
Confidence 9998764221 1 133456666665555443
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.46 E-value=9.3e-14 Score=120.22 Aligned_cols=133 Identities=14% Similarity=0.096 Sum_probs=93.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~l~~~~~~~~------------~~g~~~~~~~~Dv~ 64 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNRE---ALEKAEASVR------------EKGVEARSYVCDVT 64 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------TTTSCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEccCC
Confidence 57999999999999999999999999976 888888632 2222222222 12357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ .++.+ +.++|++|||||..... ..|...+++|+.+ ++|
T Consensus 65 ~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II 138 (260)
T d1zema1 65 SEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIV 138 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCC
Confidence 865 33333 34799999999965321 3466778899988 999
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|..-+.+.+.
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~asKaal~~ltk~ 168 (260)
T d1zema1 139 NTASMAGVKG------------PPNMAAYGTSKGAIIALTET 168 (260)
T ss_dssp EECCHHHHSC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred eeechhhccC------------CcchHHHHHHHHHHHHHHHH
Confidence 9999866432 11234566667666665543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.46 E-value=6.5e-14 Score=120.60 Aligned_cols=135 Identities=17% Similarity=0.189 Sum_probs=91.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+... .+...+.+.. ....++.++.+|++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~---~~~~~~~l~~-----------~~g~~~~~~~~Dv~ 65 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLEE---ASEAAQKLTE-----------KYGVETMAFRCDVS 65 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHH-----------HhCCcEEEEEccCC
Confidence 57899999999999999999999999976 8888886321 1111111111 12357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVH 254 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~ 254 (298)
+++ .++.+ +.++|++|||||.... ...|...+++|+.| ++|+
T Consensus 66 ~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~ 139 (251)
T d1vl8a_ 66 NYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIIN 139 (251)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccc
Confidence 865 34333 3479999999997532 14566778999988 9999
Q ss_pred EeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 255 VSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 255 iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+||+.+... +...+..|..+|..-+.+.+.
T Consensus 140 i~S~~~~~~-----------~~~~~~~Y~asKaal~~lt~~ 169 (251)
T d1vl8a_ 140 IGSLTVEEV-----------TMPNISAYAASKGGVASLTKA 169 (251)
T ss_dssp ECCGGGTCC-----------CSSSCHHHHHHHHHHHHHHHH
T ss_pred cccchhccc-----------cCccccchHHHHHhHHHHHHH
Confidence 999754321 111234566666655555443
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.8e-13 Score=118.20 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=93.9
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||.++++.|+++|.+ |+...|+.. ..+++.+.+.. .....++.++.+|+
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~---Vv~~~r~~~---~l~~~~~~l~~----------~~~~~~~~~~~~Dl 70 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTVG---NIEELAAECKS----------AGYPGTLIPYRCDL 70 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHH----------TTCSSEEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHh----------cCCCceEEEEEccC
Confidence 468999999999999999999999999976 788888632 22222222221 01124788999999
Q ss_pred CCCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc--------------------eEEEEeC
Q psy14522 206 SLPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG--------------------SFVHVST 257 (298)
Q Consensus 206 ~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g--------------------~~v~iSS 257 (298)
++++- .--.+...+.+.++|++||||+.... ...|...+++|+.| ++|++||
T Consensus 71 s~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS 150 (257)
T d1xg5a_ 71 SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 150 (257)
T ss_dssp TCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence 98650 00011222223479999999997532 24556677788777 8999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+++... .|...+..|..+|...+.+.+
T Consensus 151 ~~~~~~----------~p~~~~~~Y~~sKaal~~ltr 177 (257)
T d1xg5a_ 151 MSGHRV----------LPLSVTHFYSATKYAVTALTE 177 (257)
T ss_dssp GGGTSC----------CSCGGGHHHHHHHHHHHHHHH
T ss_pred hHhcCC----------CCCcccHHHHHHHHHHHhCHH
Confidence 876422 133345556767766665554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.46 E-value=1.3e-13 Score=118.99 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=83.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+||||||+++||..++++|+++|.+ |+++.|.....+....+... ....++.++.+|++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~---vii~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~d~~ 65 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK---NFVILDRVENPTALAELKAI--------------NPKVNITFHTYDVT 65 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS---EEEEEESSCCHHHHHHHHHH--------------CTTSEEEEEECCTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCcccHHHHHHHHhh--------------CCCCCEEEEEeecC
Confidence 57999999999999999999999999977 77777765433222222211 11257888999998
Q ss_pred CCC--CCCCHHHHHHHhcCccEEEEcCcccCccccHHHHhhccccc---------------------eEEEEeCCccc
Q psy14522 207 LPG--LGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAIAINIFG---------------------SFVHVSTAYTH 261 (298)
Q Consensus 207 ~~~--~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------------~~v~iSS~~~~ 261 (298)
... +.-..+...+...++|++|||||... ...|+..+++|+.| ++|++||..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~ 142 (254)
T d1sbya1 66 VPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142 (254)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence 432 10001222333457999999999754 56788889999988 69999998764
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.46 E-value=1.2e-13 Score=118.89 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=81.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+ ....++.++.+|++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~~~~~~~~~-------------~~~~~~~~~~~Dv~ 64 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD---VGEKAAKSV-------------GTPDQIQFFQHDSS 64 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHH-------------CCTTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHh-------------CCCCcEEEEEccCC
Confidence 67999999999999999999999999976 888888532 122222211 11257899999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v 253 (298)
+++ .++.+ +.++|++|||||.... ...|...+++|+.| ++|
T Consensus 65 ~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii 138 (251)
T d1zk4a1 65 DED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII 138 (251)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceE
Confidence 875 33333 3479999999997532 14566788999988 789
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||+.+.
T Consensus 139 ~isS~~~~ 146 (251)
T d1zk4a1 139 NMSSIEGF 146 (251)
T ss_dssp EECCGGGT
T ss_pred eeecccee
Confidence 99998764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.8e-13 Score=117.26 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=94.5
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+. +++++.... ...+..+.+|+
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~---V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~Dv 61 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQ------ADLDSLVRE-------------CPGIEPVCVDL 61 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH-------------STTCEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCH------HHHHHHHHh-------------cCCCeEEEEeC
Confidence 368999999999999999999999999976 88888863 233332221 14678889999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEe
Q psy14522 206 SLPGLGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
++++ .++++++ ++|++||||+..... ..|...+++|+.+ ++|++|
T Consensus 62 ~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~is 135 (244)
T d1pr9a_ 62 GDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecc
Confidence 9875 5555554 689999999975322 4566678888887 899999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|+++... ...+..|..+|+.-+.+.+.+
T Consensus 136 S~~~~~~------------~~~~~~Y~asKaal~~lt~~l 163 (244)
T d1pr9a_ 136 SQCSQRA------------VTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp CGGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ccccccc------------ccchhhhhhhHHHHHHHHHHH
Confidence 9876432 112445666777666665543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.45 E-value=1.4e-13 Score=118.56 Aligned_cols=136 Identities=17% Similarity=0.111 Sum_probs=92.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+.. ++++... +...+..++.+|+
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~~~~~------~~~~~~~------------~~~~~~~~~~~Dv 61 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINEA------AGQQLAA------------ELGERSMFVRHDV 61 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHH------------HHCTTEEEECCCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhCCCeEEEEeec
Confidence 367999999999999999999999999876 888888532 2222211 1225778899999
Q ss_pred CCCCC-CCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc-----------------eEEEEeCCcc
Q psy14522 206 SLPGL-GLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG-----------------SFVHVSTAYT 260 (298)
Q Consensus 206 ~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-----------------~~v~iSS~~~ 260 (298)
+++.- .-..+...+.+.++|++|||||.... ...|+..+++|+.| ++|++||+++
T Consensus 62 ~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~ 141 (253)
T d1hxha_ 62 SSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS 141 (253)
T ss_dssp TCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence 98650 00011222223479999999997532 14567788999988 9999999876
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
... ...+..|..+|+.-+.+.+
T Consensus 142 ~~~------------~~~~~~Y~asKaal~~lt~ 163 (253)
T d1hxha_ 142 WLP------------IEQYAGYSASKAAVSALTR 163 (253)
T ss_dssp TSC------------CTTBHHHHHHHHHHHHHHH
T ss_pred hcC------------ccccccccchhHHHHHHHH
Confidence 432 1223456666666555544
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.45 E-value=1.5e-13 Score=118.58 Aligned_cols=133 Identities=11% Similarity=0.130 Sum_probs=92.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+++.+.++ ....++.++.+|++
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~~~~~~~~l~------------~~g~~~~~~~~Dvs 70 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINAD---AANHVVDEIQ------------QLGGQAFACRCDIT 70 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------HcCCcEEEEEccCC
Confidence 57999999999999999999999999976 888888532 1222222222 12357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc------cccHHHHhhccccc------------------eEEEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF------DENIKVAIAINIFG------------------SFVHV 255 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~------~~~~~~~~~~Nv~g------------------~~v~i 255 (298)
+++ .++.+ +.++|++|||||.... ...|+..+++|+.| ++|++
T Consensus 71 ~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~i 144 (255)
T d1fmca_ 71 SEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccc
Confidence 865 33333 3479999999997532 24566788999998 89999
Q ss_pred eCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 256 STAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 256 SS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
||+.+.... ..+..|..+|..-+.+.+.
T Consensus 145 sS~~~~~~~------------~~~~~Y~asKaal~~lt~~ 172 (255)
T d1fmca_ 145 TSMAAENKN------------INMTSYASSKAAASHLVRN 172 (255)
T ss_dssp CCGGGTCCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred cccchhccc------------cccccchhHHHHHHHHHHH
Confidence 998664321 1234566666655555443
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.45 E-value=6.9e-14 Score=120.94 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=92.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+... .+...+.+.. .....++..+.+|++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~---l~~~~~~~~~----------~~~~~~~~~~~~Dvt 65 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAK---LSLVDVSSEG---LEASKAAVLE----------TAPDAEVLTTVADVS 65 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH----------HCTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh----------hCCCCeEEEEeccCC
Confidence 57899999999999999999999999976 8888886321 1222211111 011247889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccC----c----cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVR----F----DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~----~----~~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ +++.+ +.++|++|||||... + ...|+..+++|+.| ++|
T Consensus 66 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 139 (258)
T d1iy8a_ 66 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV 139 (258)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCc
Confidence 875 44443 347999999999642 1 14566788999998 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++||+.+... ...+..|..+|+.-+.+.+
T Consensus 140 ~isS~~~~~~------------~~~~~~Y~asKaal~~lt~ 168 (258)
T d1iy8a_ 140 NTASVGGIRG------------IGNQSGYAAAKHGVVGLTR 168 (258)
T ss_dssp EECCGGGTSB------------CSSBHHHHHHHHHHHHHHH
T ss_pred ccccHhhccC------------CCCchHHHHHHHHHHHHHH
Confidence 9999866432 1123456666665555544
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.44 E-value=2.5e-13 Score=116.25 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=93.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|++ |++..|+.. ++.+..+. ..++..+.+|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~------~l~~~~~~-------------~~~~~~~~~Dv~ 60 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTNS------DLVSLAKE-------------CPGIEPVCVDLG 60 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHh-------------cCCCeEEEEeCC
Confidence 47899999999999999999999999977 888888632 23222211 146788999999
Q ss_pred CCCCCCCHHHHHHHhc---CccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVLRR---NVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~---~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iSS 257 (298)
+++ .++++++ ++|++|||||..... ..|+..+++|+.| ++|++||
T Consensus 61 ~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS 134 (242)
T d1cyda_ 61 DWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 134 (242)
T ss_dssp CHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccch
Confidence 875 5666654 689999999975321 4566678888888 8999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+.+... ...+..|..+|..-+.+.+.+
T Consensus 135 ~~~~~~------------~~~~~~Y~asKaal~~lt~~l 161 (242)
T d1cyda_ 135 MVAHVT------------FPNLITYSSTKGAMTMLTKAM 161 (242)
T ss_dssp GGGTSC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred hhcccc------------CCccccccchHHHHHHHHHHH
Confidence 865432 112445677777666665543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.44 E-value=2.1e-13 Score=117.89 Aligned_cols=133 Identities=20% Similarity=0.264 Sum_probs=91.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+. ....++.++.+|++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~l~~~~~~~~------------~~g~~~~~~~~Dv~ 67 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQK---ELNDCLTQWR------------SKGFKVEASVCDLS 67 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCCceEEEeeCC
Confidence 57999999999999999999999999876 888888632 1122222211 12257788999999
Q ss_pred CCCCCCCHHHHHHH-------hc-CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------RR-NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~-~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v 253 (298)
+++ .++.+ +. ++|++|||||..... ..|+..+++|+.| ++|
T Consensus 68 ~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 141 (259)
T d2ae2a_ 68 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV 141 (259)
T ss_dssp CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccc
Confidence 865 33322 23 589999999975321 4566788999988 999
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... | .+..|..+|..-+.+.+.
T Consensus 142 ~isS~~~~~~~----------~--~~~~Y~asKaal~~lt~~ 171 (259)
T d2ae2a_ 142 FISSVSGALAV----------P--YEAVYGATKGAMDQLTRC 171 (259)
T ss_dssp EECCGGGTSCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc----------c--cccchHHHHHHHHHHHHH
Confidence 99998664321 1 234566666665555443
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.43 E-value=3.3e-13 Score=116.40 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=91.8
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+. ....++.++.+|+++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~---V~i~~r~~~---~l~~~~~~l~------------~~g~~~~~~~~Dvs~ 62 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEE---GLRTTLKELR------------EAGVEADGRTCDVRS 62 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEeecCC
Confidence 3789999999999999999999999976 888888632 2222222222 123578899999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc--------------------eEE
Q psy14522 208 PGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------------SFV 253 (298)
Q Consensus 208 ~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------------~~v 253 (298)
++ .++.+ +.++|++|||||..... ..|...+++|+.| ++|
T Consensus 63 ~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii 136 (257)
T d2rhca1 63 VP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIV 136 (257)
T ss_dssp HH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccc
Confidence 75 34433 34799999999975321 4566778899888 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+... ...+..|..+|..-+.+.+.
T Consensus 137 ~i~S~~~~~~------------~~~~~~Y~asKaal~~ltk~ 166 (257)
T d2rhca1 137 NIASTGGKQG------------VVHAAPYSASKHGVVGFTKA 166 (257)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cccccccccc------------cccchhHHHHHHHHHHHHHH
Confidence 9999866432 11234566666666655543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.42 E-value=4.1e-13 Score=115.74 Aligned_cols=130 Identities=14% Similarity=0.083 Sum_probs=90.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+. ....++.++.+|+++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~l~~~~~~i~------------~~g~~~~~~~~Dv~~~~ 63 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDA---TAKAVASEIN------------QAGGHAVAVKVDVSDRD 63 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTTSHH
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCcEEEEEeeCCCHH
Confidence 66799999999999999999999976 888888632 1222222222 12357889999999865
Q ss_pred CCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc-------------------eEEEEe
Q psy14522 210 LGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG-------------------SFVHVS 256 (298)
Q Consensus 210 ~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g-------------------~~v~iS 256 (298)
+++.+ +.++|++|||||.... ...|+..+++|+.| +++++|
T Consensus 64 ------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~is 137 (255)
T d1gega_ 64 ------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINAC 137 (255)
T ss_dssp ------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred ------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcccccccccc
Confidence 34433 3479999999997532 14567788999988 799999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|+.+... ...+..|..+|..-+.+.+.
T Consensus 138 S~~~~~~------------~~~~~~Y~asKaal~~ltk~ 164 (255)
T d1gega_ 138 SQAGHVG------------NPELAVYSSSKFAVRGLTQT 164 (255)
T ss_dssp CGGGTSC------------CTTBHHHHHHHHHHHHHHHH
T ss_pred chhhccc------------CcccccchhCHHHHHhhHHH
Confidence 9865422 12244566667766665544
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.7e-13 Score=117.88 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=80.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+.. ++++... ...+..++.+|+
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~~------~~~~~~~-------------~~~~~~~~~~Dv 60 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR---VVICDKDES------GGRALEQ-------------ELPGAVFILCDV 60 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-------------HCTTEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH-------------hcCCCeEEEccC
Confidence 357999999999999999999999999876 888888632 2222211 114678899999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc--------ccHHHHhhccccc-----------------eEE
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG-----------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g-----------------~~v 253 (298)
++++ +++++ +.++|++|||||..... ..|+..+++|+.| ++|
T Consensus 61 s~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii 134 (250)
T d1ydea1 61 TQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVI 134 (250)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCc
Confidence 9865 44443 34799999999964211 3466788999998 999
Q ss_pred EEeCCccc
Q psy14522 254 HVSTAYTH 261 (298)
Q Consensus 254 ~iSS~~~~ 261 (298)
++||+.+.
T Consensus 135 ~isS~~~~ 142 (250)
T d1ydea1 135 NISSLVGA 142 (250)
T ss_dssp EECCHHHH
T ss_pred cccccccc
Confidence 99998664
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.40 E-value=5.6e-13 Score=114.04 Aligned_cols=95 Identities=20% Similarity=0.204 Sum_probs=71.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+. +++++..+. -+..++.+|++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~---V~~~~r~~------~~l~~~~~~--------------~~~~~~~~Dv~ 59 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGAR---LVACDIEE------GPLREAAEA--------------VGAHPVVMDVA 59 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH--------------cCCeEEEEecC
Confidence 57899999999999999999999999876 88888863 233332221 25678899999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g 250 (298)
+++ +++++ +.++|++|||||..... ..|...+++|+.|
T Consensus 60 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~ 111 (242)
T d1ulsa_ 60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTG 111 (242)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHH
T ss_pred CHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchh
Confidence 875 34433 34799999999975321 4567788999988
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=4.8e-13 Score=115.22 Aligned_cols=131 Identities=15% Similarity=0.133 Sum_probs=91.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|++|||||+++||+++++.|+++|.+ |++..|+... .++..+.+.. .....++.++.+|+++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~---~~~~~~~l~~----------~~~~~~~~~~~~Dv~~ 65 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAK---VALVDWNLEA---GVQCKAALHE----------QFEPQKTLFIQCDVAD 65 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHTT----------TSCGGGEEEEECCTTS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHH----------hcCCCcEEEEEeecCC
Confidence 5899999999999999999999999876 8888886321 1122111110 0112478899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCcccCccccHHHHhhccccc---------------------eEEEEeCCc
Q psy14522 208 PGLGLSAADRAVLR-------RNVTVVFHGAATVRFDENIKVAIAINIFG---------------------SFVHVSTAY 259 (298)
Q Consensus 208 ~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~~~~~~~~~~Nv~g---------------------~~v~iSS~~ 259 (298)
++ .++.++ .++|++|||||... ..+|++.+++|+.+ +||++||+.
T Consensus 66 ~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 66 QQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred HH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 65 444433 47999999999754 46678888888887 599999987
Q ss_pred ccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHH
Q psy14522 260 THCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNL 293 (298)
Q Consensus 260 ~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l 293 (298)
+..+ ...+..|..+|..-+.+.
T Consensus 139 ~~~~------------~~~~~~Y~asKaal~~lt 160 (254)
T d2gdza1 139 GLMP------------VAQQPVYCASKHGIVGFT 160 (254)
T ss_dssp GTSC------------CTTCHHHHHHHHHHHHHH
T ss_pred hccC------------CCCccchHHHHHHHHHHH
Confidence 6432 112345666666555544
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.39 E-value=1.2e-12 Score=112.22 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=69.7
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+||||||+++||+++++.|++.+....+|++..|+....+ .+.+... ...++.++.+|++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~---~~~~~~~-------------~~~~~~~~~~Dvs~~ 65 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK---ELEDLAK-------------NHSNIHILEIDLRNF 65 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHHHH-------------HCTTEEEEECCTTCG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH---HHHHHHh-------------cCCcEEEEEEEeccH
Confidence 378999999999999999999864333355999999865432 2333222 125899999999997
Q ss_pred CCCCC-HHHHHHH--hcCccEEEEcCcccCcc--------ccHHHHhhccccc
Q psy14522 209 GLGLS-AADRAVL--RRNVTVVFHGAATVRFD--------ENIKVAIAINIFG 250 (298)
Q Consensus 209 ~~gl~-~~~~~~l--~~~vd~Vih~A~~~~~~--------~~~~~~~~~Nv~g 250 (298)
+--.. .+.++.. ..++|++|||||..... ..+...+++|+.|
T Consensus 66 ~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g 118 (248)
T d1snya_ 66 DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 118 (248)
T ss_dssp GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred HHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhcccc
Confidence 61000 0111111 23699999999974321 2355678889887
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.39 E-value=6.2e-13 Score=115.38 Aligned_cols=134 Identities=17% Similarity=0.216 Sum_probs=91.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+.. ++++.... + ....++.++.+|+
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~---V~i~~r~~~------~~~~~~~~-----l-----~~~~~~~~~~~Dv 63 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAK---VVIADIADD------HGQKVCNN-----I-----GSPDVISFVHCDV 63 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-----CCTTTEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----h-----cCCCceEEEEccC
Confidence 367999999999999999999999999876 888888632 22222211 1 1125678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCcccCcc---------ccHHHHhhccccc------------------e
Q psy14522 206 SLPGLGLSAADRAVLR-------RNVTVVFHGAATVRFD---------ENIKVAIAINIFG------------------S 251 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~~---------~~~~~~~~~Nv~g------------------~ 251 (298)
++++ +++.++ .++|++|||||..... +.|+..+++|+.| +
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ 137 (268)
T d2bgka1 64 TKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS 137 (268)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCC
Confidence 9875 444443 4799999999964211 3466778899988 9
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+|++||+.+.... .+.. ..|..+|..-+.+.+.
T Consensus 138 ii~iss~~~~~~~---------~~~~--~~Y~asKaal~~lt~~ 170 (268)
T d2bgka1 138 IVFTASISSFTAG---------EGVS--HVYTATKHAVLGLTTS 170 (268)
T ss_dssp EEEECCGGGTCCC---------TTSC--HHHHHHHHHHHHHHHH
T ss_pred ccccccccccccc---------cccc--cccchhHHHHHhCHHH
Confidence 9999998654321 1112 2466666666655544
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.38 E-value=4.2e-13 Score=114.93 Aligned_cols=130 Identities=18% Similarity=0.182 Sum_probs=88.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
++||||||+++||+++++.|+++|.+ |++..++.. ...+.+.+.++. ...++.++.+|+++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~---V~i~~~~~~--~~~~~~~~~~~~------------~g~~~~~~~~Dv~~~~ 64 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSA--KAAEEVSKQIEA------------YGGQAITFGGDVSKEA 64 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHHH------------HTCEEEEEECCTTSHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHHH------------cCCcEEEEeCCCCCHH
Confidence 47999999999999999999999977 665443321 222333332221 2257889999999875
Q ss_pred CCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeC
Q psy14522 210 LGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVST 257 (298)
Q Consensus 210 ~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS 257 (298)
.++.+ +.++|++|||||..... ..|+..+++|+.| ++|++||
T Consensus 65 ------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS 138 (244)
T d1edoa_ 65 ------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS 138 (244)
T ss_dssp ------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 44433 34799999999975321 4567788999988 9999999
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+.+.... | .+..|..+|..-+.+.+
T Consensus 139 ~~~~~~~----------~--~~~~Y~asKaal~~ltk 163 (244)
T d1edoa_ 139 VVGLIGN----------I--GQANYAAAKAGVIGFSK 163 (244)
T ss_dssp THHHHCC----------T--TCHHHHHHHHHHHHHHH
T ss_pred hhhcCCC----------C--CCHHHHHHHHHHHHChH
Confidence 8764221 1 23456666665555544
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.38 E-value=7.6e-13 Score=115.35 Aligned_cols=129 Identities=19% Similarity=0.282 Sum_probs=90.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+. +++.+.... ...++..+.+|++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~------~~l~~~~~~------------~~~~~~~~~~Dv~ 61 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAK---VAVLDKSA------ERLAELETD------------HGDNVLGIVGDVR 61 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH------------HGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH------------cCCCeeEEecccc
Confidence 57899999999999999999999999976 88888863 233332221 1257889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc------------ccHHHHhhccccc-----------------
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD------------ENIKVAIAINIFG----------------- 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~------------~~~~~~~~~Nv~g----------------- 250 (298)
+++ .++.+ +.++|++|||||..... ..|+..+++|+.|
T Consensus 62 ~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g 135 (276)
T d1bdba_ 62 SLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRG 135 (276)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 865 33333 34799999999964321 1367788999988
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
++|++||+.+.... | .+..|..+|..-+.+.+
T Consensus 136 ~iI~i~S~~~~~~~----------~--~~~~Y~asKaal~~ltr 167 (276)
T d1bdba_ 136 NVIFTISNAGFYPN----------G--GGPLYTAAKHAIVGLVR 167 (276)
T ss_dssp EEEEECCGGGTSTT----------S--SCHHHHHHHHHHHHHHH
T ss_pred CceeeeechhccCC----------C--CCchHHHHHHHHHHHHH
Confidence 89999997654221 1 23345666665555544
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.38 E-value=4.9e-13 Score=115.54 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=76.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|++.|.+ |++..|+.. ..++..+.+. ....++..+.+|++
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga~---V~~~~r~~~---~l~~~~~~~~------------~~~~~~~~~~~Dv~ 67 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV---IHTCARNEY---ELNECLSKWQ------------KKGFQVTGSVCDAS 67 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCceEEEeccCC
Confidence 47999999999999999999999999976 888888632 1122222211 11257889999999
Q ss_pred CCCC-CCCHHHHHHHh-cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCc
Q psy14522 207 LPGL-GLSAADRAVLR-RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAY 259 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~-~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~ 259 (298)
+++- .--.+...+.+ ..+|++|||||.... ...|+..+++|+.| ++|++||+.
T Consensus 68 ~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 68 LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147 (259)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred CHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence 8650 00001112222 358999999997532 14567788999988 999999986
Q ss_pred cc
Q psy14522 260 TH 261 (298)
Q Consensus 260 ~~ 261 (298)
+.
T Consensus 148 ~~ 149 (259)
T d1xq1a_ 148 GV 149 (259)
T ss_dssp --
T ss_pred cc
Confidence 64
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=8e-13 Score=115.73 Aligned_cols=137 Identities=18% Similarity=0.177 Sum_probs=94.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+||||||+++||+++++.|++.|.++..|+...|+.. ..+++.+.... ......++.++.+|++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~---~~~~l~~~~~~---------~~~~~~~~~~~~~Dv~~~ 69 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK---TQGRLWEAARA---------LACPPGSLETLQLDVRDS 69 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGG---GTHHHHHHHHH---------TTCCTTSEEEEECCTTCH
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChh---hhHHHHHHHHH---------HhccCCceEEEeccccch
Confidence 578899999999999999999999988655665556432 22333333221 112336899999999997
Q ss_pred CCCCCHHHHHHHhc-----CccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCC
Q psy14522 209 GLGLSAADRAVLRR-----NVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTA 258 (298)
Q Consensus 209 ~~gl~~~~~~~l~~-----~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~ 258 (298)
+ .+..+.+ .+|+++|||+..... ..|...+++|+.| ++|++||+
T Consensus 70 ~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~ 143 (285)
T d1jtva_ 70 K------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV 143 (285)
T ss_dssp H------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred H------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence 6 5555543 589999999975322 4566778999988 99999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+..+. | .++.|..+|+.-+.+.+.
T Consensus 144 ~g~~~~----------~--~~~~Y~asKaal~~l~~~ 168 (285)
T d1jtva_ 144 GGLMGL----------P--FNDVYCASKFALEGLCES 168 (285)
T ss_dssp GGTSCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred hhcCCC----------C--CchHHHHHHHHHHHHHHH
Confidence 765321 1 234566667765555443
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.37 E-value=1.5e-12 Score=111.09 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=79.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCc----ceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHL----ERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v----~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
++||||||+++||+++++.|+++|.++ ..|++..|+.. ..+.+.+.+. ....++.++.+|+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~---~l~~~~~~~~------------~~g~~~~~~~~Dv 66 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLECR------------AEGALTDTITADI 66 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHHHH------------TTTCEEEEEECCT
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHH---HHHHHHHHHH------------hcCCcEEEEEecC
Confidence 468999999999999999999999752 23666777532 1222222221 1235778899999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
++++ +++++ +.++|++|||||.... ...|+..+++|+.| ++|
T Consensus 67 t~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 140 (240)
T d2bd0a1 67 SDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF 140 (240)
T ss_dssp TSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence 9875 34333 3479999999997532 24667788999998 899
Q ss_pred EEeCCcccC
Q psy14522 254 HVSTAYTHC 262 (298)
Q Consensus 254 ~iSS~~~~~ 262 (298)
++||+.+..
T Consensus 141 ~isS~~~~~ 149 (240)
T d2bd0a1 141 FITSVAATK 149 (240)
T ss_dssp EECCGGGTS
T ss_pred EEechhhcC
Confidence 999987653
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.37 E-value=6.7e-13 Score=114.60 Aligned_cols=133 Identities=16% Similarity=0.229 Sum_probs=91.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||++.||++++++|+++|.+ |++..|+.. ..+...+.+. .....+.++.+|++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~---V~i~~r~~~---~l~~~~~~~~------------~~~~~~~~~~~D~s 65 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNEK---ELDECLEIWR------------EKGLNVEGSVCDLL 65 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHH------------hcCCCceEEEeecC
Confidence 57999999999999999999999999977 888888632 1112222211 12356788999999
Q ss_pred CCCCCCCHHHHHHH-------h-cCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEE
Q psy14522 207 LPGLGLSAADRAVL-------R-RNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFV 253 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~-~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v 253 (298)
+.+ +++++ . ..+|+++|||+.... ...|...+++|+.+ ++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii 139 (258)
T d1ae1a_ 66 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 139 (258)
T ss_dssp CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence 865 33333 2 248999999997532 24667778888888 999
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++||+.+.... | .+..|..+|..-+.+.+.
T Consensus 140 ~isS~~~~~~~----------~--~~~~Y~~sK~al~~lt~~ 169 (258)
T d1ae1a_ 140 FLSSIAGFSAL----------P--SVSLYSASKGAINQMTKS 169 (258)
T ss_dssp EECCGGGTSCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc----------c--cchhHHHHHHHHHHHHHH
Confidence 99998764321 1 234556666655555443
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=8.1e-13 Score=116.39 Aligned_cols=140 Identities=13% Similarity=0.174 Sum_probs=92.1
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
|..+++|++|||||+++||+++++.|+++|.+ |++..|+... .+...+.+.. . .......++.++.+
T Consensus 7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~---Vvi~~r~~~~---l~~~~~el~~----~---~~~~~~~~~~~~~~ 73 (297)
T d1yxma1 7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSN---VVIASRKLER---LKSAADELQA----N---LPPTKQARVIPIQC 73 (297)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH----T---SCTTCCCCEEEEEC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh----h---hccccCceEEEEec
Confidence 34578999999999999999999999999976 8888886321 1111111111 0 01122357899999
Q ss_pred CCCCCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-------cccHHHHhhccccc------------------e
Q psy14522 204 DVSLPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------S 251 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~ 251 (298)
|+++++ .+..+ +.++|++||||+.... ...|+..+++|+.| +
T Consensus 74 Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ 147 (297)
T d1yxma1 74 NIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGS 147 (297)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEE
T ss_pred cCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccc
Confidence 999875 34433 3479999999996532 14567788999998 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+|++||..... .| .+..|..+|..-+.+.+.
T Consensus 148 Ii~~ss~~~~~-----------~~--~~~~Y~asKaal~~ltk~ 178 (297)
T d1yxma1 148 IVNIIVPTKAG-----------FP--LAVHSGAARAGVYNLTKS 178 (297)
T ss_dssp EEEECCCCTTC-----------CT--TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-----------cc--ccccchhHHHHHHHHHHH
Confidence 88876643211 11 134456666666655543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.34 E-value=1.6e-12 Score=112.09 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=90.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+|++|||||++.||.++++.|+++|++ |++..|... ...+++.+.+. ....++..+.+|++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~---Vvi~~~~~~--~~~~~~~~~~~------------~~g~~~~~~~~D~~ 66 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSS--KAAEEVVAELK------------KLGAQGVAIQADIS 66 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEcCCCh--HHHHHHHHHHH------------HcCCCceEecCCCC
Confidence 67999999999999999999999999987 665544322 22233333322 12357889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEe
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVS 256 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iS 256 (298)
+++ .+..+ ..++|++|||||..... ..|+..+++|+.+ ++++++
T Consensus 67 ~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~ 140 (259)
T d1ja9a_ 67 KPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 140 (259)
T ss_dssp SHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence 865 33333 34799999999975321 4556778889888 777787
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
|.++... +...+..|..+|+.-+.+.+.+
T Consensus 141 s~~~~~~-----------~~~~~~~Y~asK~al~~l~r~l 169 (259)
T d1ja9a_ 141 SIAAVMT-----------GIPNHALYAGSKAAVEGFCRAF 169 (259)
T ss_dssp CGGGTCC-----------SCCSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-----------CCCCchhHHHHHHHHHHHHHHH
Confidence 7654321 1112445666776666655543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.34 E-value=3.3e-12 Score=110.97 Aligned_cols=104 Identities=14% Similarity=0.210 Sum_probs=73.0
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+... .....++.++.+|+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~---V~l~~r~~~---~l~~~~~~l~~~---------~~~~~~~~~~~~Dv 66 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGAN---VTITGRSSE---RLEETRQIILKS---------GVSEKQVNSVVADV 66 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHTT---------TCCGGGEEEEECCT
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHhc---------CCCCCceEEEEccC
Confidence 367999999999999999999999999876 888888632 222222222110 01124688999999
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-----------ccHHHHhhccccc
Q psy14522 206 SLPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-----------ENIKVAIAINIFG 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-----------~~~~~~~~~Nv~g 250 (298)
++++ .++.+ +.++|++|||||..... ..|...+++|+.|
T Consensus 67 s~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~ 123 (272)
T d1xkqa_ 67 TTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHH
T ss_pred CCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhH
Confidence 9875 34433 34799999999975311 1366778899988
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.34 E-value=2.5e-12 Score=111.20 Aligned_cols=137 Identities=12% Similarity=0.143 Sum_probs=88.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+... .....++.++.+|++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~l~~~~~~l~~~---------~~~~~~~~~~~~Dvt 67 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHAE---RLEETRQQILAA---------GVSEQNVNSVVADVT 67 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHHT---------TCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHhc---------CCCcCceEEEEccCC
Confidence 57999999999999999999999999976 888888632 122222222110 011246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-----------cccHHHHhhccccc-----------------e
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-----------DENIKVAIAINIFG-----------------S 251 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g-----------------~ 251 (298)
+++ .+++++ .++|++|||||.... .+.|+..+++|+.| +
T Consensus 68 ~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~ 141 (264)
T d1spxa_ 68 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGE 141 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCc
Confidence 875 444433 479999999996421 13467788999998 7
Q ss_pred EEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 252 FVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 252 ~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
+|+++|+.+... +...+..|..+|..-+.+.+.
T Consensus 142 iI~~~S~~~~~~-----------~~~~~~~Y~asKaal~~lt~~ 174 (264)
T d1spxa_ 142 IVNISSIASGLH-----------ATPDFPYYSIAKAAIDQYTRN 174 (264)
T ss_dssp EEEECCTTSSSS-----------CCTTSHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeccccc-----------cCCCchhhhhhhhhHHHHHHH
Confidence 777777643211 111234566666665555443
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.33 E-value=1.6e-12 Score=111.77 Aligned_cols=132 Identities=15% Similarity=0.179 Sum_probs=88.1
Q ss_pred hcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 127 YRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 127 ~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
+++|++|||||+| +||++++++|+++|.+ |++..|+... .+...+... ...+..++.+|
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~---V~i~~~~~~~---~~~~~~~~~-------------~~~~~~~~~~D 66 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAERL---RPEAEKLAE-------------ALGGALLFRAD 66 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHH-------------HTTCCEEEECC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCcHHH---HHHHHHhhh-------------ccCcccccccc
Confidence 6799999999998 7999999999999977 7777775322 112222111 11466789999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCccEEEEcCcccC-------cc----ccHHHHhhccccc----------------
Q psy14522 205 VSLPGLGLSAADRAVL-------RRNVTVVFHGAATVR-------FD----ENIKVAIAINIFG---------------- 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~-------~~----~~~~~~~~~Nv~g---------------- 250 (298)
+++++ +++.+ +.++|++||||+... +. ..|...+++|+.+
T Consensus 67 ~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G 140 (256)
T d1ulua_ 67 VTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGG 140 (256)
T ss_dssp TTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred cCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCC
Confidence 99865 34433 347999999998642 11 2345567788877
Q ss_pred eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+... ...+..|..+|..-+.+.+.
T Consensus 141 ~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~ltr~ 173 (256)
T d1ulua_ 141 GIVTLTYYASEKV------------VPKYNVMAIAKAALEASVRY 173 (256)
T ss_dssp EEEEEECGGGTSB------------CTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeehHhcCC------------CCCchHHHHHHHHHHHHHHH
Confidence 8999999866432 11244566666666655543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.33 E-value=6.4e-13 Score=110.79 Aligned_cols=120 Identities=17% Similarity=0.181 Sum_probs=80.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.|+|||||||||||++++++|+++|+. .+|+++.|++... ..++.....|+.+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------~~~~~~~~~d~~~- 54 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------HPRLDNPVGPLAE- 54 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------CTTEECCBSCHHH-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------cccccccccchhh-
Confidence 489999999999999999999999753 5688888864321 1344443444321
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccccc--------------eEEEEeCCcccCCCCCccCcCCC
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINIFG--------------SFVHVSTAYTHCPRQEIDEVFYP 273 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv~g--------------~~v~iSS~~~~~~~~~~~E~~~~ 273 (298)
....+...+|.|||++|... .......+...|+.+ +|+|+||..+...
T Consensus 55 -------~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~---------- 117 (212)
T d2a35a1 55 -------LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK---------- 117 (212)
T ss_dssp -------HGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT----------
T ss_pred -------hhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc----------
Confidence 12233346899999998653 223334555666655 8999999765422
Q ss_pred CCCChHHHHHHHHHHHHHHHhhh
Q psy14522 274 PPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 274 ~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
+. ..|..+|+.+|+.+.+.
T Consensus 118 -~~---~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 118 -SS---IFYNRVKGELEQALQEQ 136 (212)
T ss_dssp -CS---SHHHHHHHHHHHHHTTS
T ss_pred -cc---cchhHHHHHHhhhcccc
Confidence 11 24778899999988653
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.33 E-value=1.1e-12 Score=113.27 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=73.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|.+ |++..|+.... .+..++..+ ....++.++.+|++
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~~--~~~~~~~~~------------~~g~~~~~~~~Dv~ 69 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGAN---VAVIYRSAADA--VEVTEKVGK------------EFGVKTKAYQCDVS 69 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCTTH--HHHHHHHHH------------HHTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHH------------HhCCceEEEEccCC
Confidence 57999999999999999999999999876 88888875432 111111111 11257889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCcccCc-------cccHHHHhhccccc
Q psy14522 207 LPGLGLSAADRAVLR-------RNVTVVFHGAATVRF-------DENIKVAIAINIFG 250 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~-------~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g 250 (298)
+++ .+++++ .++|++||||+.... ...|+..+++|+.|
T Consensus 70 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g 121 (260)
T d1h5qa_ 70 NTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFG 121 (260)
T ss_dssp CHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHH
T ss_pred CHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccc
Confidence 875 444443 479999999997532 14567788999988
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.33 E-value=1.6e-12 Score=113.09 Aligned_cols=135 Identities=14% Similarity=0.119 Sum_probs=89.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|+++||||+++||+++++.|+++|.+ |++..|+.. ..+.+.+.+... .....++.++.+|++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~l~~~~~~i~~~---------~~~~~~~~~~~~Dv~ 66 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ---VTITGRNED---RLEETKQQILKA---------GVPAEKINAVVADVT 66 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHHHT---------TCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHHHHc---------CCCCcceEEEEeeCC
Confidence 57999999999999999999999999876 888888632 122222222110 011247889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCc-----c----ccHHHHhhccccc------------------eE
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRF-----D----ENIKVAIAINIFG------------------SF 252 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~-----~----~~~~~~~~~Nv~g------------------~~ 252 (298)
+++ .++.+ +.++|++|||||.... . +.|...+++|+.| ++
T Consensus 67 ~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~i 140 (274)
T d1xhla_ 67 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIV 140 (274)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccc
Confidence 875 34433 3479999999996421 1 3466778899988 77
Q ss_pred EEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 253 VHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 253 v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
+++||..+... ...+..|..+|..-+.+.+
T Consensus 141 i~~ss~~~~~~------------~~~~~~Y~asKaal~~ltk 170 (274)
T d1xhla_ 141 NVSSIVAGPQA------------HSGYPYYACAKAALDQYTR 170 (274)
T ss_dssp EECCGGGSSSC------------CTTSHHHHHHHHHHHHHHH
T ss_pred cchhhhhcccc------------CCCCceehhhhhHHHHHHH
Confidence 77777654321 1123456666665555544
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=1.1e-12 Score=115.86 Aligned_cols=143 Identities=15% Similarity=0.077 Sum_probs=88.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCcc---chhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGK---TVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~---~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
.+++|++|||||+++||+++++.|+++|.+ |++.+|..+.. ...+.+++.... ...+...+.
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~---Vvi~d~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 68 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEE------------IRRRGGKAV 68 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHH------------HHHTTCEEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCchhhhhhhhHHHHHHHHHH------------Hhhcccccc
Confidence 467999999999999999999999999976 88877764321 111222222111 002333455
Q ss_pred cCCCCCCCCC-CHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEe
Q psy14522 203 GDVSLPGLGL-SAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVS 256 (298)
Q Consensus 203 ~Dl~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iS 256 (298)
+|+.+.+-.. ..+...+.+.++|++|||||..... ..|+..+++|+.| +||++|
T Consensus 69 ~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~is 148 (302)
T d1gz6a_ 69 ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA 148 (302)
T ss_dssp EECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeC
Confidence 6666654100 0112222344799999999975321 4567788999998 999999
Q ss_pred CCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 257 TAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 257 S~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
|+.+.... | ....|..+|..-+.+.+.
T Consensus 149 S~~~~~~~----------~--~~~~Y~asKaal~~lt~~ 175 (302)
T d1gz6a_ 149 SASGIYGN----------F--GQANYSAAKLGLLGLANT 175 (302)
T ss_dssp CHHHHHCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCC----------C--CcHHHHHHHHHHHHHHHH
Confidence 98654211 1 234566666655555443
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.32 E-value=1.3e-12 Score=112.62 Aligned_cols=119 Identities=20% Similarity=0.233 Sum_probs=82.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|||||||||||++|+++|.++|++ |++++|.. +|+.+..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~---Vi~~~r~~------------------------------------~D~~d~~ 42 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVE---VIPTDVQD------------------------------------LDITNVL 42 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEE---EEEECTTT------------------------------------CCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEeechh------------------------------------ccCCCHH
Confidence 78999999999999999999999876 88887742 3565544
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCcccCcc---ccHHHHhhccccc-------------eEEEEeCCcc--cCCCCCccC
Q psy14522 210 LGLSAADRAVLRR--NVTVVFHGAATVRFD---ENIKVAIAINIFG-------------SFVHVSTAYT--HCPRQEIDE 269 (298)
Q Consensus 210 ~gl~~~~~~~l~~--~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g-------------~~v~iSS~~~--~~~~~~~~E 269 (298)
.+.++++ ++|+|||+|+..... .........|+.. .++++||..+ .....+..|
T Consensus 43 ------~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e 116 (281)
T d1vl0a_ 43 ------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITE 116 (281)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCT
T ss_pred ------HHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccc
Confidence 5666655 679999999976532 2223334444444 6777777533 334456777
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 270 VFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 270 ~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+..|... |..+|+.+|++++..
T Consensus 117 ~~~~~~~~~---~~~~k~~~e~~~~~~ 140 (281)
T d1vl0a_ 117 FDEVNPQSA---YGKTKLEGENFVKAL 140 (281)
T ss_dssp TSCCCCCSH---HHHHHHHHHHHHHHH
T ss_pred cccccchhh---hhhhhhHHHHHHHHh
Confidence 776655554 566778888888754
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.32 E-value=5.2e-12 Score=107.28 Aligned_cols=124 Identities=16% Similarity=0.132 Sum_probs=87.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|++ |++..|+.. .+++ ...+++.+|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~---V~~~~r~~~------~l~~------------------~~~~~~~~Dv~ 54 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAE---VTICARNEE------LLKR------------------SGHRYVVCDLR 54 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHH------------------TCSEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHh------------------cCCcEEEcchH
Confidence 47899999999999999999999999976 888888621 1111 24457788987
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCc-------cccHHHHhhccccc------------------eEEEEeCCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRF-------DENIKVAIAINIFG------------------SFVHVSTAYTH 261 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~-------~~~~~~~~~~Nv~g------------------~~v~iSS~~~~ 261 (298)
+. .+.+.+.+.++|++|||||.... ...|+..+++|+.+ ++|++||+.+.
T Consensus 55 ~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~ 129 (234)
T d1o5ia_ 55 KD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI 129 (234)
T ss_dssp TC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc
Confidence 63 34555666789999999996432 14566678889888 89999997543
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLE 294 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~ 294 (298)
.. ...+..|..+|+.-+.+.+
T Consensus 130 ~~------------~~~~~~Y~asKaal~~ltk 150 (234)
T d1o5ia_ 130 SP------------IENLYTSNSARMALTGFLK 150 (234)
T ss_dssp SC------------CTTBHHHHHHHHHHHHHHH
T ss_pred cc------------ccccccchhHHHHHHHHHH
Confidence 21 1123345556666555544
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.30 E-value=5.1e-12 Score=108.28 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=69.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+||||||+++||.+++++|+++|.. .+|++..|+... +++.. .....++.++.+|+++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~-~~Vi~~~R~~~~------~~~l~------------~~~~~~~~~~~~Dvs~ 62 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEK------ATELK------------SIKDSRVHVLPLTVTC 62 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGG------CHHHH------------TCCCTTEEEEECCTTC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCC-CEEEEEeCCHHH------HHHHH------------HhhCCceEEEEEecCC
Confidence 4689999999999999999999999864 347777786432 11111 1223689999999998
Q ss_pred CCC-CCCHHHHHHHhc--CccEEEEcCcccCc----c----ccHHHHhhccccc
Q psy14522 208 PGL-GLSAADRAVLRR--NVTVVFHGAATVRF----D----ENIKVAIAINIFG 250 (298)
Q Consensus 208 ~~~-gl~~~~~~~l~~--~vd~Vih~A~~~~~----~----~~~~~~~~~Nv~g 250 (298)
..- .-..+.+.+.+. .+|++|||||.... . ..+...+++|+.|
T Consensus 63 ~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g 116 (250)
T d1yo6a1 63 DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhh
Confidence 640 000011222222 38999999997421 1 2456778999988
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.30 E-value=5.3e-12 Score=109.55 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=82.6
Q ss_pred hhhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 123 DREFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 123 ~~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
.+..+++|++|||||++.||+++++.|+++|.+ |++..|+.. +..+.+.+.+. ....++.++.
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~---Vvi~~~~~~--~~~~~~~~~~~------------~~g~~~~~~~ 74 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANST--ESAEEVVAAIK------------KNGSDAACVK 74 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHH------------HTTCCEEEEE
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCch--HHHHHHHHHHH------------hhCCceeeEe
Confidence 344578999999999999999999999999977 777766532 12222222222 1235788999
Q ss_pred cCCCCCCC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCC
Q psy14522 203 GDVSLPGL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTA 258 (298)
Q Consensus 203 ~Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~ 258 (298)
+|+++++- .-..+...+.+.++|++||||+..... ..+...+++|+.+ ++++++|+
T Consensus 75 ~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~ 154 (272)
T d1g0oa_ 75 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 154 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence 99998650 000112233334789999999975322 3456678888888 78888887
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
++.
T Consensus 155 ~~~ 157 (272)
T d1g0oa_ 155 TGQ 157 (272)
T ss_dssp GGT
T ss_pred ccc
Confidence 543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2.6e-12 Score=109.96 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=93.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||++.||+++++.|+++|++ |++..|++. ++++.. ....+....+|+.
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~---Vi~~~r~~~------~l~~~~--------------~~~~~~~~~~d~~ 60 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINES------KLQELE--------------KYPGIQTRVLDVT 60 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHGGGG--------------GSTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCHH------HHHHHH--------------hccCCceeeeecc
Confidence 67999999999999999999999999977 888888632 221110 1145677778876
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc------------------eEEEEeCCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG------------------SFVHVSTAYTH 261 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g------------------~~v~iSS~~~~ 261 (298)
..+ ..+.....+.++|++|||||..... ..|...+++|+.+ ++|++||+.+.
T Consensus 61 ~~~---~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~ 137 (245)
T d2ag5a1 61 KKK---QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137 (245)
T ss_dssp CHH---HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred ccc---cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc
Confidence 543 1223344455899999999976422 4566778889888 99999997642
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
. .+...+..|..+|..-+.+.+.+
T Consensus 138 ~-----------~~~~~~~~Y~~sKaal~~l~r~l 161 (245)
T d2ag5a1 138 V-----------KGVVNRCVYSTTKAAVIGLTKSV 161 (245)
T ss_dssp T-----------BCCTTBHHHHHHHHHHHHHHHHH
T ss_pred c-----------CCccchhHHHHHHHHHHHHHHHH
Confidence 1 12335667788888777776654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=8.2e-12 Score=108.17 Aligned_cols=143 Identities=17% Similarity=0.202 Sum_probs=92.6
Q ss_pred hhhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 124 REFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
|..++||++|||||+++||.++++.|+++|.+ |++..|+.. ++++..... . ......+..+.+
T Consensus 9 ~~~L~GK~alITGassGIG~aiA~~la~~G~~---Vil~~r~~~------~l~~~~~~~-~-------~~~~~~~~~~~~ 71 (269)
T d1xu9a_ 9 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAH---VVVTARSKE------TLQKVVSHC-L-------ELGAASAHYIAG 71 (269)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHHH-H-------HHTCSEEEEEEC
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHHH-h-------hhhcccchhhhh
Confidence 34478999999999999999999999999976 899998632 232222110 0 012246777888
Q ss_pred CCCCCCCC-CCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc-----------------eEEEEeCC
Q psy14522 204 DVSLPGLG-LSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-----------------SFVHVSTA 258 (298)
Q Consensus 204 Dl~~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-----------------~~v~iSS~ 258 (298)
|+.+...- ...+........+|+++|||+..... ..+...+++|+.| ++|++||+
T Consensus 72 d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~ 151 (269)
T d1xu9a_ 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSL 151 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred hhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccc
Confidence 88765310 00112233345789999999975321 3445678889888 89999998
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
.+... ...+..|..+|+.-+.+.+.
T Consensus 152 ~~~~~------------~p~~~~Y~asKaal~~~~~~ 176 (269)
T d1xu9a_ 152 AGKVA------------YPMVAAYSASKFALDGFFSS 176 (269)
T ss_dssp GGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred hhcCC------------CCCchHHHHHHHHHHHHHHH
Confidence 65422 12245666666666555443
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.28 E-value=4.3e-12 Score=108.28 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=90.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||+++++.|+++|++ |++..|+.. ++.+... +...++.++.+|++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dls 61 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREER------LLAEAVA------------ALEAEAIAVVADVS 61 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TCCSSEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HcCCceEEEEecCC
Confidence 57999999999999999999999999977 888888632 2332222 23367889999999
Q ss_pred CCCCCCCHHHHHHH-------hcCccEEEEcCcccCcc-------ccHHHHhhccccc---------------eEEEEeC
Q psy14522 207 LPGLGLSAADRAVL-------RRNVTVVFHGAATVRFD-------ENIKVAIAINIFG---------------SFVHVST 257 (298)
Q Consensus 207 ~~~~gl~~~~~~~l-------~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g---------------~~v~iSS 257 (298)
+++ .++++ +.++|++||||+..... ..|...+++|+.+ ..++++|
T Consensus 62 ~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~s 135 (241)
T d2a4ka1 62 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 135 (241)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecc
Confidence 875 44333 34799999999975321 3556678888887 3444444
Q ss_pred CcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 258 AYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 258 ~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
..+.. +...+..|..+|+.-|.+.+.+
T Consensus 136 s~a~~------------~~~~~~~Y~~sK~al~~lt~~l 162 (241)
T d2a4ka1 136 SVAGL------------GAFGLAHYAAGKLGVVGLARTL 162 (241)
T ss_dssp CCTTC------------CHHHHHHHHHCSSHHHHHHHHH
T ss_pred ccccc------------cccCccccchhhHHHHHHHHHH
Confidence 32211 1123566888888877776544
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.28 E-value=7.4e-12 Score=107.80 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=91.7
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+.+|+++||||+++||.+++++|++.+.+..+|++..|+.. ..+.+.+.+... ....++.++.+|+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~---~l~~~~~~l~~~----------~~~~~~~~~~~Dv 69 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES---MLRQLKEELGAQ----------QPDLKVVLAAADL 69 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH---HHHHHHHHHHHH----------CTTSEEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH---HHHHHHHHHHhh----------cCCceEEEEEccC
Confidence 367999999999999999999999863222234888888632 222222222110 1124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-----------CccEEEEcCcccCc------c----ccHHHHhhccccc--------------
Q psy14522 206 SLPGLGLSAADRAVLRR-----------NVTVVFHGAATVRF------D----ENIKVAIAINIFG-------------- 250 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~-----------~vd~Vih~A~~~~~------~----~~~~~~~~~Nv~g-------------- 250 (298)
++++ .++++++ .+|+++||||.... . ..|...+++|+.|
T Consensus 70 s~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~ 143 (259)
T d1oaaa_ 70 GTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQD 143 (259)
T ss_dssp TSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCC
T ss_pred CCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Confidence 9875 4444431 46899999986421 1 3466678899888
Q ss_pred ------eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 251 ------SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 251 ------~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++|++||+.+..+ ...+..|..+|..-+.+.+.
T Consensus 144 ~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~ 182 (259)
T d1oaaa_ 144 SPGLSKTVVNISSLCALQP------------YKGWGLYCAGKAARDMLYQV 182 (259)
T ss_dssp CTTCEEEEEEECCGGGTSC------------CTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCC------------CccchHHHHHHHHHHHHHHH
Confidence 7899999866432 22345677777766666554
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.27 E-value=2.1e-11 Score=106.08 Aligned_cols=137 Identities=17% Similarity=0.188 Sum_probs=85.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++|||||||||||++++++|+++|++ |++++|+....... +...... + ...+++++.+|+.+.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~---V~~~~R~~~~~~~~-~~~~~~~------~------~~~~v~~v~~d~~d~ 66 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID-KVQMLLY------F------KQLGAKLIEASLDDH 66 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHH-HHHHHHH------H------HTTTCEEECCCSSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCcccchh-HHHHHhh------h------ccCCcEEEEeecccc
Confidence 567999999999999999999999988 99999976543221 1111100 0 125789999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCccccH----HHHhhccccc--eEEEEeCCcccCCCCCccCcCCCCCCChHHHH
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRFDENI----KVAIAINIFG--SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFM 282 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~----~~~~~~Nv~g--~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~y 282 (298)
. .+...+.+++.++|+++........ ..+....-.+ ++++.||....... + ..+..+...|
T Consensus 67 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~----~---~~~~~~~~~~ 133 (312)
T d1qyda_ 67 Q------RLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI----M---EHALQPGSIT 133 (312)
T ss_dssp H------HHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS----C---CCCCSSTTHH
T ss_pred h------hhhhhccCcchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC----c---ccccchhhhh
Confidence 6 7888889999999999864322111 1111111111 77888775433221 1 1222333445
Q ss_pred HHHHHHHHHHHh
Q psy14522 283 ELVMSRSDDNLE 294 (298)
Q Consensus 283 k~sK~~aE~~l~ 294 (298)
..++..+++...
T Consensus 134 ~~~~~~~~~~~~ 145 (312)
T d1qyda_ 134 FIDKRKVRRAIE 145 (312)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHhhc
Confidence 555666666554
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.26 E-value=3.9e-12 Score=109.41 Aligned_cols=116 Identities=27% Similarity=0.326 Sum_probs=81.9
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
|..++++|||||+|+||.+++++|+++|.. +|+++.|+....+..+.+.+.+. ....++.++.+|+
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~------------~~g~~v~~~~~Dv 71 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELE------------ALGARTTVAACDV 71 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHH------------HTTCEEEEEECCT
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCccCHHHHHHHHHHHH------------hcccccccccccc
Confidence 445789999999999999999999999853 47777886433333333322222 1225789999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCcccCcc-------ccHHHHhhccccc--------------eEEEEeCC
Q psy14522 206 SLPGLGLSAADRAVLRR------NVTVVFHGAATVRFD-------ENIKVAIAINIFG--------------SFVHVSTA 258 (298)
Q Consensus 206 ~~~~~gl~~~~~~~l~~------~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g--------------~~v~iSS~ 258 (298)
+++. .+..+.+ ++|.|+|||+..... ..+...+.+|+.| +||++||+
T Consensus 72 ~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~ 145 (259)
T d2fr1a1 72 TDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSF 145 (259)
T ss_dssp TCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEH
T ss_pred chHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecch
Confidence 9876 5555544 479999999976422 2345567778777 89999998
Q ss_pred ccc
Q psy14522 259 YTH 261 (298)
Q Consensus 259 ~~~ 261 (298)
.+.
T Consensus 146 a~~ 148 (259)
T d2fr1a1 146 ASA 148 (259)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.26 E-value=3.6e-11 Score=103.74 Aligned_cols=109 Identities=18% Similarity=0.301 Sum_probs=75.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
..|+|||||||||||++++++|++.|++ |++++|.........+...... + ....+.++.+|+.+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~---V~~l~R~~~~~~~~~~~~~~~~------~------~~~~~~~~~~d~~~ 66 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLLES------F------KASGANIVHGSIDD 66 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHHHHHH------H------HTTTCEEECCCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEECCCccccchhHHHHHHh------h------ccCCcEEEEeeccc
Confidence 4688999999999999999999999987 9999998654433332221111 1 12578899999988
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHH---hhccccceEEEEeCC
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVA---IAINIFGSFVHVSTA 258 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~---~~~Nv~g~~v~iSS~ 258 (298)
.. .+...+.+++.++|+++........... ...++. ++++.||.
T Consensus 67 ~~------~~~~~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~s~~ 113 (307)
T d1qyca_ 67 HA------SLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTV-KRFFPSEF 113 (307)
T ss_dssp HH------HHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCC-SEEECSCC
T ss_pred ch------hhhhhhhhceeeeecccccccchhhHHHHHHHHhccc-cceeeecc
Confidence 65 6777778999999999876554433222 111111 66776664
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=7.8e-12 Score=108.60 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=75.8
Q ss_pred Cce-eeecCCCCCCchhHHHHHHHh-CCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 129 GAS-VFVTGGTGFMGKTLTEKLLRA-CPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 129 ~k~-vLVTGatG~iG~~l~~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+|+ +|||||+++||.+++++|++. |.. |++..|+... .+...+.++ ....++.++.+|++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~---Vi~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~Dvs 63 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---VVLTARDVTR---GQAAVQQLQ------------AEGLSPRFHQLDID 63 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE---EEEEESSHHH---HHHHHHHHH------------HTTCCCEEEECCTT
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCE---EEEEECCHHH---HHHHHHHHH------------hcCCcEEEEEEecC
Confidence 444 599999999999999999987 544 8888887431 112222211 11257889999999
Q ss_pred CCCC-CCCHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc----------------eEEEEeCCc
Q psy14522 207 LPGL-GLSAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG----------------SFVHVSTAY 259 (298)
Q Consensus 207 ~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g----------------~~v~iSS~~ 259 (298)
+.+- .-..+.+.+...++|++|||||..... ..++..+++|+.| ++|++||+.
T Consensus 64 ~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~ 140 (275)
T d1wmaa1 64 DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM 140 (275)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 8651 000112222234799999999975321 3455678899998 899999974
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=1.1e-11 Score=105.18 Aligned_cols=130 Identities=12% Similarity=0.014 Sum_probs=82.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
++|+||||||+|+||+++++.|+++|++ |++++|...... .....+..+..+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~---V~~~~~~~~~~~-------------------------~~~~~~~~~~~~ 52 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWW---VASIDVVENEEA-------------------------SASVIVKMTDSF 52 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSCCTTS-------------------------SEEEECCCCSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc-------------------------cccceeecccCc
Confidence 4799999999999999999999999877 777777543211 122233333332
Q ss_pred CCC-CCCHHHHHHHhc--CccEEEEcCcccC---c-----cccHHHHhhccccc----------------eEEEEeCCcc
Q psy14522 208 PGL-GLSAADRAVLRR--NVTVVFHGAATVR---F-----DENIKVAIAINIFG----------------SFVHVSTAYT 260 (298)
Q Consensus 208 ~~~-gl~~~~~~~l~~--~vd~Vih~A~~~~---~-----~~~~~~~~~~Nv~g----------------~~v~iSS~~~ 260 (298)
..- ............ ++|++|||||... . ...++..+++|+.+ ++|++||..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 132 (236)
T d1dhra_ 53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA 132 (236)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence 210 000011222222 5899999998532 1 13455667888887 9999999865
Q ss_pred cCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14522 261 HCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEFS 297 (298)
Q Consensus 261 ~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~~ 297 (298)
... ...+..|..+|+.-+.+.+.++
T Consensus 133 ~~~------------~~~~~~Y~asKaal~~lt~~la 157 (236)
T d1dhra_ 133 LDG------------TPGMIGYGMAKGAVHQLCQSLA 157 (236)
T ss_dssp GSC------------CTTBHHHHHHHHHHHHHHHHHT
T ss_pred cCC------------ccCCcccHHHHHHHHHHHHHHH
Confidence 422 2235678888888777766543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.21 E-value=1.1e-11 Score=108.56 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=86.8
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDV 205 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 205 (298)
.+++|++|||||+|+||+++++.|+++|.+ |++..|+... ..+..++... ....++.++.+|+
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~---Vii~~r~~~~--l~~~~~~l~~------------~~g~~~~~~~~D~ 84 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQ---CVIASRKMDV--LKATAEQISS------------QTGNKVHAIQCDV 84 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH------------HHSSCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHHH--HHHHHHHHHH------------hcCCceEEEEecc
Confidence 478999999999999999999999999976 8888886431 1111111111 1235788999999
Q ss_pred CCCCCCC-CHHHHHHHhcCccEEEEcCcccCcc-------ccHHHHhhccccc-------------------eEEEEeCC
Q psy14522 206 SLPGLGL-SAADRAVLRRNVTVVFHGAATVRFD-------ENIKVAIAINIFG-------------------SFVHVSTA 258 (298)
Q Consensus 206 ~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~~~~-------~~~~~~~~~Nv~g-------------------~~v~iSS~ 258 (298)
++.+--. ..........++|++|||||..... ..+...+.+|+.+ .++.+||.
T Consensus 85 ~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~ 164 (294)
T d1w6ua_ 85 RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI 164 (294)
T ss_dssp TCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred cChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccc
Confidence 9865100 0011222234799999999975422 2334445555544 67777776
Q ss_pred cccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14522 259 YTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEE 295 (298)
Q Consensus 259 ~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~ 295 (298)
++.... | .+..|..+|..-+.+.+.
T Consensus 165 ~~~~~~----------~--~~~~YsasKaal~~ltk~ 189 (294)
T d1w6ua_ 165 YAETGS----------G--FVVPSASAKAGVEAMSKS 189 (294)
T ss_dssp HHHHCC----------T--TCHHHHHHHHHHHHHHHH
T ss_pred hhhhcc----------c--ccchHHHHHHHHHHHHHH
Confidence 543211 1 233466666666655543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.18 E-value=1.7e-11 Score=103.88 Aligned_cols=128 Identities=15% Similarity=0.096 Sum_probs=81.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
.++||||||+|+||++++++|+++|++ |++++|...... .....+.+|....
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~---V~~~~~~~~~~~-------------------------~~~~~~~~~~~~~ 53 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYT---VLNIDLSANDQA-------------------------DSNILVDGNKNWT 53 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCCTTS-------------------------SEEEECCTTSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCchhcc-------------------------cccceeccccCch
Confidence 457899999999999999999999876 899988754211 1223344444432
Q ss_pred CCC-CCHHHHHHH--hcCccEEEEcCcccCc----c----ccHHHHhhccccc----------------eEEEEeCCccc
Q psy14522 209 GLG-LSAADRAVL--RRNVTVVFHGAATVRF----D----ENIKVAIAINIFG----------------SFVHVSTAYTH 261 (298)
Q Consensus 209 ~~g-l~~~~~~~l--~~~vd~Vih~A~~~~~----~----~~~~~~~~~Nv~g----------------~~v~iSS~~~~ 261 (298)
.-- ...+..... ..++|++|||||.... . ..++..+++|+.+ ++|++||+.+.
T Consensus 54 ~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~ 133 (235)
T d1ooea_ 54 EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM 133 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred hHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc
Confidence 100 000111221 2368999999996321 1 2345567888887 99999998654
Q ss_pred CCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 262 CPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 262 ~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.. ......|..+|+.-+.+.+.+
T Consensus 134 ~~------------~~~~~~Y~asKaal~~l~~~l 156 (235)
T d1ooea_ 134 GP------------TPSMIGYGMAKAAVHHLTSSL 156 (235)
T ss_dssp SC------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred CC------------cccccchHHHHHHHHHHHHHH
Confidence 32 122456777888777776654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.15 E-value=1.7e-11 Score=102.44 Aligned_cols=77 Identities=21% Similarity=0.278 Sum_probs=61.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
-++|||||||||||+++++.|+++|+++ .|+++.|++.. .. ....+++++.+|+.+.
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~------~~----------------~~~~~~~~~~~d~~~~ 59 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQG------KE----------------KIGGEADVFIGDITDA 59 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHH------HH----------------HTTCCTTEEECCTTSH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHH------HH----------------hccCCcEEEEeeeccc
Confidence 4689999999999999999999998763 57778886421 00 1125788999999887
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccc
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
. .+.++++++|.|||+|+..
T Consensus 60 ~------~~~~~~~~~d~vi~~a~~~ 79 (252)
T d2q46a1 60 D------SINPAFQGIDALVILTSAV 79 (252)
T ss_dssp H------HHHHHHTTCSEEEECCCCC
T ss_pred c------ccccccccceeeEEEEeec
Confidence 6 7888899999999999864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.15 E-value=3.8e-11 Score=102.91 Aligned_cols=107 Identities=15% Similarity=0.043 Sum_probs=71.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
++|||||+++||+++++.|+++|.+ |++..|+... .+.++.... .+..+|+++.+-
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~---V~i~~r~~~~---~~~~~~~~~------------------~~~~~dv~~~~~ 57 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQ---KDELEAFAE------------------TYPQLKPMSEQE 57 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGS---HHHHHHHHH------------------HCTTSEECCCCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHhhhC------------------cEEEeccCCHHH
Confidence 6899999999999999999999976 8888876432 222222111 123466666541
Q ss_pred CC-CHHHHHHHhcCccEEEEcCcccCc----c----ccHHHHhhccccc------------------eEEEEeCCccc
Q psy14522 211 GL-SAADRAVLRRNVTVVFHGAATVRF----D----ENIKVAIAINIFG------------------SFVHVSTAYTH 261 (298)
Q Consensus 211 gl-~~~~~~~l~~~vd~Vih~A~~~~~----~----~~~~~~~~~Nv~g------------------~~v~iSS~~~~ 261 (298)
-. -.+...+.+.++|++|||||.... . .+|...+++|+.+ ++|++||+.+.
T Consensus 58 ~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~ 135 (252)
T d1zmta1 58 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF 135 (252)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc
Confidence 00 012233334579999999986421 1 3466678889888 99999998654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=8.5e-11 Score=101.87 Aligned_cols=132 Identities=19% Similarity=0.192 Sum_probs=75.0
Q ss_pred eeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCCC
Q psy14522 132 VFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGLG 211 (298)
Q Consensus 132 vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~g 211 (298)
|||||||||||++|+++|+++|+. .|+++++-...... .++. . ....... +..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~~~-~~~~---~--------------~~~~~~~-----~~~-- 54 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKF-VNLV---D--------------LNIADYM-----DKE-- 54 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGG-HHHH---T--------------SCCSEEE-----EHH--
T ss_pred EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcchh-hccc---c--------------cchhhhc-----cch--
Confidence 899999999999999999999853 37777643332111 1110 0 0111111 100
Q ss_pred CCHHHHHHH-----hcCccEEEEcCcccCcc-ccHHHHhhccccc-------------eEEEEeCCcccC--CCCCccCc
Q psy14522 212 LSAADRAVL-----RRNVTVVFHGAATVRFD-ENIKVAIAINIFG-------------SFVHVSTAYTHC--PRQEIDEV 270 (298)
Q Consensus 212 l~~~~~~~l-----~~~vd~Vih~A~~~~~~-~~~~~~~~~Nv~g-------------~~v~iSS~~~~~--~~~~~~E~ 270 (298)
...... ...+++|+|.|+..... .+.......|+.+ ++++.||..+.. ......|+
T Consensus 55 ---~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~ 131 (307)
T d1eq2a_ 55 ---DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR 131 (307)
T ss_dssp ---HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG
T ss_pred ---HHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011111 23578999999865433 3334444444544 788888764432 22234444
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 271 FYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 271 ~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
.+..|.+ .|..+|..+|.++...
T Consensus 132 ~~~~~~~---~Y~~~K~~~e~~~~~~ 154 (307)
T d1eq2a_ 132 EYEKPLN---VYGYSKFLFDEYVRQI 154 (307)
T ss_dssp GGCCCSS---HHHHHHHHHHHHHHHH
T ss_pred ccccccc---ccccccchhhhhcccc
Confidence 4444444 4677788888887754
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=2.3e-10 Score=97.47 Aligned_cols=137 Identities=15% Similarity=0.118 Sum_probs=88.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+++|++|||||+++||.+++++|+++|++ |++..|+.... +...+. ...+......|+.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~---V~~~~r~~~~~---~~~~~~---------------l~~~~~~~~~~~~ 61 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGAS---AVLLDLPNSGG---EAQAKK---------------LGNNCVFAPADVT 61 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSSH---HHHHHH---------------HCTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH---HHHHHH---------------hCCCccccccccc
Confidence 57999999999999999999999999976 88888875421 111111 1246677778877
Q ss_pred CCCCC-CCHHHHHHHhcCccEEEEcCcccCcc-------------ccHHHHhhccccc----------------------
Q psy14522 207 LPGLG-LSAADRAVLRRNVTVVFHGAATVRFD-------------ENIKVAIAINIFG---------------------- 250 (298)
Q Consensus 207 ~~~~g-l~~~~~~~l~~~vd~Vih~A~~~~~~-------------~~~~~~~~~Nv~g---------------------- 250 (298)
+...- .............|.++++++..... ..|...+++|+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~ 141 (248)
T d2o23a1 62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ 141 (248)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred ccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC
Confidence 64310 00011222234679999888754211 3456677888776
Q ss_pred --eEEEEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 251 --SFVHVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 251 --~~v~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++|++||+++... ...+..|..+|..-+.+.+.+
T Consensus 142 ~G~Ii~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 177 (248)
T d2o23a1 142 RGVIINTASVAAFEG------------QVGQAAYSASKGGIVGMTLPI 177 (248)
T ss_dssp CEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecchhhccC------------CCCchHHHHHHHHHHHHHHHH
Confidence 6999999976422 123456777777666665543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.98 E-value=1.6e-10 Score=94.83 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=71.0
Q ss_pred hhhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecC
Q psy14522 125 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGD 204 (298)
Q Consensus 125 ~~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 204 (298)
..+++|+|+||||+|+||+.+++.|+++|.+ |+++.|+... .+.+.+.+.. ..++.+..+|
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~d 79 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKLDK---AQAAADSVNK-------------RFKVNVTAAE 79 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH-------------HHTCCCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccc---hhhcccchHH---HHHHHHHHHh-------------ccchhhhhhh
Confidence 3468999999999999999999999999866 8888887421 1222222211 0245567788
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCcccCcc---ccHHHHhhccccc
Q psy14522 205 VSLPGLGLSAADRAVLRRNVTVVFHGAATVRFD---ENIKVAIAINIFG 250 (298)
Q Consensus 205 l~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~---~~~~~~~~~Nv~g 250 (298)
+++.. .+++.++++|+||||||..... ..|...+.+|+.+
T Consensus 80 ~~~~~------~~~~~~~~iDilin~Ag~g~~~~~~e~~~~~~~~nv~~ 122 (191)
T d1luaa1 80 TADDA------SRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVA 122 (191)
T ss_dssp CCSHH------HHHHHTTTCSEEEECCCTTCCCBCHHHHHTCTTCCEEE
T ss_pred cccHH------HHHHHhcCcCeeeecCccccccCCHHHHHhhhcceeeh
Confidence 88765 7888899999999999864222 3344445566544
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=1.2e-09 Score=93.33 Aligned_cols=91 Identities=15% Similarity=0.182 Sum_probs=58.2
Q ss_pred hhcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 126 FYRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 126 ~~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
++++|++|||||+| +||+++++.|+++|.+ |++..|+.. ..++..+.... ..+...+..
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~---V~i~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~ 62 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQC 62 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTT---THHHHHHHHHH-------------TTCCCEEEC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE---EEEEeCCHH---HHHHHHHHHhh-------------cCCcceeec
Confidence 36799999999998 7889999999999977 777788643 22333332221 135566777
Q ss_pred CCCCCCC-CCCHHHHHHHhcCccEEEEcCcccC
Q psy14522 204 DVSLPGL-GLSAADRAVLRRNVTVVFHGAATVR 235 (298)
Q Consensus 204 Dl~~~~~-gl~~~~~~~l~~~vd~Vih~A~~~~ 235 (298)
|+.+..- .............+|++||+|+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~ 95 (258)
T d1qsga_ 63 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAP 95 (258)
T ss_dssp CTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCC
T ss_pred ccchHHHHHHHHHHhhhcccccceEEEeecccc
Confidence 7776430 0000111111236899999998753
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.94 E-value=2e-09 Score=95.69 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=62.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+|+|+|||||||||++++++|++.|++ |++++|+.+.... ..+ ....+++++.+|+.+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~---V~~l~R~~~~~~~-~~~-----------------~~~~~v~~~~gD~~d 60 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLIA-EEL-----------------QAIPNVTLFQGPLLN 60 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHHH-HHH-----------------HTSTTEEEEESCCTT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCe---EEEEECCcchhhh-hhh-----------------cccCCCEEEEeeCCC
Confidence 4689999999999999999999999988 9999998654211 111 112578999999988
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 208 PGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+. ..+..++.+++.++++...
T Consensus 61 ~~-----~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 61 NV-----PLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CH-----HHHHHHHTTCSEEEECCCS
T ss_pred cH-----HHHHHHhcCCceEEeeccc
Confidence 53 2467788899999887654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.89 E-value=2e-09 Score=92.69 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=61.1
Q ss_pred hhcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 126 FYRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 126 ~~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
++++|++|||||+| +||.++++.|+++|.+ |++..|+.. ..+++.+.... .....++..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~---V~i~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~ 62 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNES---LEKRVRPIAQE-------------LNSPYVYEL 62 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTT---THHHHHHHHHH-------------TTCCCEEEC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH---HHHHHHHHHhh-------------CCceeEeee
Confidence 46899999999887 8999999999999977 888888743 22333332221 145567788
Q ss_pred CCCCCCCCC-CHHHHHHHhcCccEEEEcCccc
Q psy14522 204 DVSLPGLGL-SAADRAVLRRNVTVVFHGAATV 234 (298)
Q Consensus 204 Dl~~~~~gl-~~~~~~~l~~~vd~Vih~A~~~ 234 (298)
|+++..--. ........+..+|++|||++..
T Consensus 63 d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~ 94 (274)
T d2pd4a1 63 DVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFA 94 (274)
T ss_dssp CTTCHHHHHHHHHHHHHHTSCEEEEEECCCCC
T ss_pred cccchhhHHHHHHHHHHHcCCCCeEEeecccc
Confidence 888754100 0112233345799999999975
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.87 E-value=1.4e-09 Score=91.55 Aligned_cols=126 Identities=18% Similarity=0.109 Sum_probs=77.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+|++|||||+++||+++++.|+++|++ |++..|+... .+.....+|++..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~---V~i~~~~~~~---------------------------~~~~~~~~d~~~~ 50 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRREG---------------------------EDLIYVEGDVTRE 50 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCCS---------------------------SSSEEEECCTTCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCccc---------------------------ccceEeeccccch
Confidence 489999999999999999999999977 8888886432 3456677888765
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCcccCc-----------cccHHHHhhccccc------------------------eEE
Q psy14522 209 GLGLSAADRAVLRRNVTVVFHGAATVRF-----------DENIKVAIAINIFG------------------------SFV 253 (298)
Q Consensus 209 ~~gl~~~~~~~l~~~vd~Vih~A~~~~~-----------~~~~~~~~~~Nv~g------------------------~~v 253 (298)
..-.............+.++++++.... ...+...+++|+.+ ++|
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii 130 (241)
T d1uaya_ 51 EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 130 (241)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEE
T ss_pred hhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeee
Confidence 3100000011111234556666554210 12344555666555 899
Q ss_pred EEeCCcccCCCCCccCcCCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14522 254 HVSTAYTHCPRQEIDEVFYPPPYDYKDFMELVMSRSDDNLEEF 296 (298)
Q Consensus 254 ~iSS~~~~~~~~~~~E~~~~~p~~~y~~yk~sK~~aE~~l~~~ 296 (298)
++||+.+... ...+..|..+|+.-+.+.+.+
T Consensus 131 ~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~l 161 (241)
T d1uaya_ 131 NTASVAAFEG------------QIGQAAYAASKGGVVALTLPA 161 (241)
T ss_dssp EECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred eecchhhccC------------CCCchhhHHHHHHHHHHHHHH
Confidence 9999866422 112445666666666655443
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.81 E-value=1.1e-08 Score=88.07 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=27.9
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
++|||||+++||+++++.|+++|.+ |++..|.
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~---V~i~~~~ 35 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHR 35 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 6899999999999999999999977 6665554
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.71 E-value=1.6e-08 Score=86.40 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=58.0
Q ss_pred hhcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 126 FYRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 126 ~~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
++++|++|||||+| +||+++++.|+++|.+ |++..|+.. ++.+... +....+...+.+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~---Vil~~~~~~------~~~~~~~-----------~~~~~~~~~~~~ 62 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ---LVLTGFDRL------RLIQRIT-----------DRLPAKAPLLEL 62 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE---EEEEECSCH------HHHHHHH-----------TTSSSCCCEEEC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE---EEEEeCChH------HHHHHHH-----------HHcCCceeeEee
Confidence 46799999999764 6999999999999976 777777532 2212111 123356778899
Q ss_pred CCCCCCC-CCCHHHHHHHh---cCccEEEEcCccc
Q psy14522 204 DVSLPGL-GLSAADRAVLR---RNVTVVFHGAATV 234 (298)
Q Consensus 204 Dl~~~~~-gl~~~~~~~l~---~~vd~Vih~A~~~ 234 (298)
|+++..- .-..+.+.+.+ ..+|+++|||+..
T Consensus 63 dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 63 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 97 (268)
T ss_dssp CTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred ecccccccccccchhhhccccCCCcceeeeccccc
Confidence 9988530 00011222222 3479999999964
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.67 E-value=1e-07 Score=81.09 Aligned_cols=86 Identities=17% Similarity=0.192 Sum_probs=55.4
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
++|||||+++||.++++.|+++|.+ |++..|+.. ...+++.+.+.. ....+...+..|..+...
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~---Vvi~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 66 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFR---VVVHYRHSE--GAAQRLVAELNA-----------ARAGSAVLCKGDLSLSSS 66 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHHH-----------HSTTCEEEEECCCSSSTT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCch--HHHHHHHHHHHh-----------hcCCceEEEecccccchh
Confidence 6899999999999999999999977 888888643 122233222221 122456666666654321
Q ss_pred CCCHHHH-------HHHhcCccEEEEcCccc
Q psy14522 211 GLSAADR-------AVLRRNVTVVFHGAATV 234 (298)
Q Consensus 211 gl~~~~~-------~~l~~~vd~Vih~A~~~ 234 (298)
..+.. .+.+.++|++|||||..
T Consensus 67 --~~~~~~~~~~~~~~~~g~iDilvnnAG~~ 95 (266)
T d1mxha_ 67 --LLDCCEDIIDCSFRAFGRCDVLVNNASAY 95 (266)
T ss_dssp --HHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhCCCCEEEECCccC
Confidence 11122 22335799999999965
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.54 E-value=4.6e-08 Score=84.72 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=33.3
Q ss_pred hhhhcCceeeecCCCC--CCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 124 REFYRGASVFVTGGTG--FMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG--~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
|..+++|++|||||+| +||+++++.|+++|.+ |++..|.
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~---Vvi~~~~ 43 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWV 43 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCc
Confidence 3347899999999887 8999999999999977 7777764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.54 E-value=1.3e-07 Score=83.56 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=29.4
Q ss_pred cCceeeecC--CCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTG--GTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTG--atG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+|++|||| ++.+||+++++.|+++|.+ |++..|.
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~---V~i~~~~ 37 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWP 37 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCE---EEEEeCc
Confidence 368999999 5579999999999999977 7776664
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.47 E-value=4.6e-08 Score=82.86 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=30.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+||||||+++||+++++.|+++|++ |++++|+.
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~---V~~~~~~~ 35 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRD 35 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCh
Confidence 68999999999999999999999977 88888764
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=98.04 E-value=8e-07 Score=61.09 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=37.3
Q ss_pred CCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhc
Q psy14522 63 SPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVR 106 (298)
Q Consensus 63 ~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~ 106 (298)
+++.++..+++||++||||+++.++..++ ++++||++.++.++.
T Consensus 20 L~~~~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 20 LGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp TTSSCCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred cCCCCCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence 45567899999999999999999988766 567899999998875
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.98 E-value=0.0008 Score=50.22 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=52.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+|+|.|+ |.+|+++++.|.+.|++ |+++.+++. +++..... -.+.++.||.+++.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~---v~vid~d~~------~~~~~~~~--------------~~~~vi~Gd~~~~~ 56 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDKD------ICKKASAE--------------IDALVINGDCTKIK 56 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH--------------CSSEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCC---cceecCChh------hhhhhhhh--------------hhhhhccCcccchh
Confidence 68999997 99999999999999877 888877532 22221110 25678999999876
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+..+ .+..|.++-+..
T Consensus 57 ------~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 57 ------TLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp ------HHHHTTTTTCSEEEECCS
T ss_pred ------hhhhcChhhhhhhcccCC
Confidence 45555 457888886543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.0013 Score=51.96 Aligned_cols=85 Identities=12% Similarity=0.127 Sum_probs=56.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
.++++|+|.|+ |+.|+.++..|.+.| +.+|++..|.....+....+.+.+.. + ........++.
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g--~~~i~i~nR~~~~~~~~~~l~~~~~~----~---------~~~~~~~~~~~ 79 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDEFFDKALAFAQRVNE----N---------TDCVVTVTDLA 79 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHHHHHHHH----H---------SSCEEEEEETT
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcC--CceEeeeccchHHHHHHHHHHHHHHh----h---------cCcceEeeecc
Confidence 46899999997 888999999999987 45799999975533222222222211 0 12334455666
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+.. .+.......|+|||+...
T Consensus 80 ~~~------~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 80 DQQ------AFAEALASADILTNGTKV 100 (182)
T ss_dssp CHH------HHHHHHHTCSEEEECSST
T ss_pred ccc------chhhhhcccceeccccCC
Confidence 543 566667789999999764
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=96.76 E-value=0.00023 Score=49.44 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=40.9
Q ss_pred CCCCCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 60 EVGSPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 60 ~~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
..+.+..++..+.+|+++|.||+.+..+..++ ++++||++.++.++.+
T Consensus 21 ~~g~~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~ 80 (86)
T d2af8a_ 21 TDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLING 80 (86)
T ss_dssp CSCCCCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHH
T ss_pred ccCCCccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHH
Confidence 35677888999999999999999998887665 5679999999988774
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.66 E-value=0.0025 Score=49.24 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.|+|+|.|| |++|+++++.|.+.|++ |++++|..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~---V~v~dr~~ 35 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIK---VTVACRTL 35 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCE---EEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEECCh
Confidence 588999987 99999999999999876 99999974
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=96.43 E-value=0.00054 Score=48.42 Aligned_cols=47 Identities=2% Similarity=-0.065 Sum_probs=40.1
Q ss_pred CCCCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 61 VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 61 ~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+.+..++..|.+|+++|+||+.+..+..++ ++++||++.++.++..
T Consensus 21 ~~~~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~ 79 (95)
T d1nq4a_ 21 ESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNA 79 (95)
T ss_dssp STTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHH
T ss_pred hCCChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHH
Confidence 4567888899999999999999998887665 5679999999988764
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.35 E-value=0.00065 Score=53.14 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|+||+|.+|++|++.|++.|++ |.+..|++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~---V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 57889999999999999999999988 88889964
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=96.34 E-value=0.00061 Score=46.75 Aligned_cols=43 Identities=7% Similarity=-0.153 Sum_probs=35.7
Q ss_pred ccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhccCC
Q psy14522 67 EFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPKK 109 (298)
Q Consensus 67 ~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~~ 109 (298)
+...|..|+++|+||+.+..+..++ ++++||++.++.|+++..
T Consensus 25 ~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~~ 79 (82)
T d1or5a_ 25 AGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 79 (82)
T ss_dssp GGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred CCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhcc
Confidence 3566788999999999998876554 678999999999998743
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.28 E-value=0.0042 Score=48.77 Aligned_cols=38 Identities=24% Similarity=0.185 Sum_probs=31.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG 168 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~ 168 (298)
.+.+|||+||+|.+|...++-....|.+ |+...+++..
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~---Viat~~s~~k 68 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAAE 68 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTTC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCc---eEEecCchHH
Confidence 4678999999999999888877777766 8888877543
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.26 E-value=0.0037 Score=46.29 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=50.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|+++|.|. |.+|+++++.|.+.|++ |+++..++. +++... ......+.+|.+++.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~---vvvid~d~~------~~~~~~---------------~~~~~~~~gd~~~~~ 55 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINEE------KVNAYA---------------SYATHAVIANATEEN 55 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCHH------HHHHTT---------------TTCSEEEECCTTCTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCe---EEEecCcHH------HHHHHH---------------HhCCcceeeecccch
Confidence 56788876 89999999999999987 777766522 222111 134567789999887
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+..+ +.++|.+|-...
T Consensus 56 ------~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 56 ------ELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp ------HHHHHTGGGCSEEEECCC
T ss_pred ------hhhccCCccccEEEEEcC
Confidence 56655 567888776554
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.23 E-value=0.00078 Score=46.20 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCCccccccCCeEEEecCcccchHHHHHHHHh--------------hCCChHHhHHhhcc
Q psy14522 62 GSPIQEFYRGASVFVTGGTGFMGKTLTEKLLR--------------ACPHLERVYLLVRP 107 (298)
Q Consensus 62 ~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~--------------~~ptv~~l~~~i~~ 107 (298)
..+..++.++++||++|+||+.+..+...+-. .+|||..++.++..
T Consensus 16 ~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~ 75 (83)
T d2jq4a1 16 PTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL 75 (83)
T ss_dssp SSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHH
T ss_pred CCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHH
Confidence 45778899999999999999999887765522 25889988877654
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.20 E-value=0.00068 Score=45.80 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=32.7
Q ss_pred CccccccCCeEEEecCcccchHHHHHHHHhh-----------CCChHHhHHhh
Q psy14522 64 PIQEFYRGASVFVTGGTGFMGKTLTEKLLRA-----------CPHLERVYLLV 105 (298)
Q Consensus 64 ~~~~~~~~~~ff~~Gg~sl~~~~l~~~ll~~-----------~ptv~~l~~~i 105 (298)
+..++.++++||++|+||+++..+..++-.. +||+.+|+.+.
T Consensus 21 ~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~~Ti~~L~el~ 73 (76)
T d2pnga1 21 DLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQEMS 73 (76)
T ss_dssp SCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHTS
T ss_pred CHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHHHhhHHHHHHHH
Confidence 4678999999999999999999988776443 36666666553
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.0021 Score=43.36 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=31.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.++.+|+|+||+|.+|...++.+...|.+ |++..++++
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~---Vi~~t~s~~ 67 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGRES 67 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGG
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCe---EEEEECCHH
Confidence 35788999999999999999887777766 888888754
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.87 E-value=0.0054 Score=49.99 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=49.3
Q ss_pred hcCceeeecCC----------------CCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhc
Q psy14522 127 YRGASVFVTGG----------------TGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAE 190 (298)
Q Consensus 127 ~~~k~vLVTGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~ 190 (298)
+.+++||||+| ||..|.+|++++..+|++ |.++......
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~---V~li~g~~~~---------------------- 58 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---VTLVSGPVSL---------------------- 58 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---EEEEECSCCC----------------------
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc---hhhhhccccc----------------------
Confidence 45777888765 577899999999999988 6555443221
Q ss_pred CccccCCeEEEecCCCCCCCCCCHHHHHHHhcCccEEEEcCcccCc
Q psy14522 191 VPHFRSKISVVTGDVSLPGLGLSAADRAVLRRNVTVVFHGAATVRF 236 (298)
Q Consensus 191 ~~~~~~~v~~v~~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~ 236 (298)
.....+..+...-...- ...+...+...|++|++|+...|
T Consensus 59 --~~p~~~~~~~~~t~~~m----~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 59 --PTPPFVKRVDVMTALEM----EAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp --CCCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECCBCCSE
T ss_pred --CcccccccceehhhHHH----HHHHHhhhccceeEeeeechhhh
Confidence 11134555443211110 12344445689999999998765
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=95.83 E-value=0.018 Score=44.19 Aligned_cols=78 Identities=24% Similarity=0.217 Sum_probs=52.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
+.+++|+|.|+ |.+|..+++.|...|. .+|++..|... +..+.... + +..+. ++
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~~------ka~~l~~~------------~--~~~~~--~~- 75 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTYE------RAVELARD------------L--GGEAV--RF- 75 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSHH------HHHHHHHH------------H--TCEEC--CG-
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcHH------HHHHHHHh------------h--hcccc--cc-
Confidence 56899999997 9999999999999974 46888888632 22211111 0 11221 11
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccc
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDE 238 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~ 238 (298)
+++...+...|+||.+.+...+.-
T Consensus 76 --------~~~~~~l~~~Divi~atss~~~ii 99 (159)
T d1gpja2 76 --------DELVDHLARSDVVVSATAAPHPVI 99 (159)
T ss_dssp --------GGHHHHHHTCSEEEECCSSSSCCB
T ss_pred --------hhHHHHhccCCEEEEecCCCCccc
Confidence 256677789999999988654443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.80 E-value=0.0092 Score=45.12 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=28.1
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+|.|.||+|.+|++++..|..+|. +.++.+++..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~-~~elvLiDi~ 35 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIA 35 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESS
T ss_pred eEEEECCCChHHHHHHHHHHhCCc-cceEEEEecc
Confidence 689999999999999998887753 4678887764
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=95.57 E-value=0.0024 Score=43.72 Aligned_cols=47 Identities=9% Similarity=0.021 Sum_probs=38.4
Q ss_pred CCCCccccccCCeEEEecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 61 VGSPIQEFYRGASVFVTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 61 ~~~~~~~~~~~~~ff~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
.+.+..++.++.+|+.+|.||+....+..++ ++.+||+..++.++..
T Consensus 21 l~~~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~ 79 (85)
T d1vkua_ 21 MGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIK 79 (85)
T ss_dssp TCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred HCCCHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHH
Confidence 3456778899999999999999998876555 5678999999988764
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=95.46 E-value=0.0031 Score=42.74 Aligned_cols=46 Identities=17% Similarity=0.071 Sum_probs=36.8
Q ss_pred CCCccccccCCeEEEecC-cccchHHHHHHHHh--------------hCCChHHhHHhhcc
Q psy14522 62 GSPIQEFYRGASVFVTGG-TGFMGKTLTEKLLR--------------ACPHLERVYLLVRP 107 (298)
Q Consensus 62 ~~~~~~~~~~~~ff~~Gg-~sl~~~~l~~~ll~--------------~~ptv~~l~~~i~~ 107 (298)
+.+..++.++.+||+.|| ||+.+..++.++-. .+|||..|+.++..
T Consensus 18 ~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~ 78 (80)
T d1dv5a_ 18 GSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp TSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHT
T ss_pred ccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHH
Confidence 446667889999999986 99999999887732 46899999888764
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.42 E-value=0.017 Score=43.57 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=29.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.||+|.+|+.++..|+.++. +.++.++++.+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l-~~el~L~D~~~ 36 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREH 36 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCc-ccccccccchh
Confidence 5799999999999999999988853 35688888753
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.26 E-value=0.0045 Score=47.07 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=29.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~~~ 167 (298)
|+|.|.||||++|+.+++.|+++. +.+..++++.++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 478999999999999999988762 34566777766543
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.22 E-value=0.0042 Score=47.07 Aligned_cols=36 Identities=33% Similarity=0.329 Sum_probs=27.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
.++|.|.||||++|..+++.|.++++...++..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 468999999999999999988765444445555543
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.21 E-value=0.025 Score=42.49 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=54.2
Q ss_pred eeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCCC
Q psy14522 131 SVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPGL 210 (298)
Q Consensus 131 ~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~~ 210 (298)
+|.|.||+|.+|+.++..|+.++. +.++.+++.......+.....+ +.+. . ....+..+..+|..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~~~~~g~a~D-l~~~----~-----~~~~~~~i~~~~~~---- 66 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDDTVGQAAD-TNHG----I-----AYDSNTRVRQGGYE---- 66 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHHHHHHHHH-HHHH----H-----TTTCCCEEEECCGG----
T ss_pred eEEEECCCCcHHHHHHHHHHhCCC-CCEEEEEecCCcccccceeecc-hhhc----c-----cccCCceEeeCCHH----
Confidence 689999999999999999998853 4668887763221111111111 1110 0 01234444444432
Q ss_pred CCCHHHHHHHhcCccEEEEcCcccC-ccccHHHHhhccc
Q psy14522 211 GLSAADRAVLRRNVTVVFHGAATVR-FDENIKVAIAINI 248 (298)
Q Consensus 211 gl~~~~~~~l~~~vd~Vih~A~~~~-~~~~~~~~~~~Nv 248 (298)
. +.+.|+|+-.||... ...+..++++.|.
T Consensus 67 --------~-~~~aDiVvitaG~~~~~g~~R~dl~~~N~ 96 (142)
T d1o6za1 67 --------D-TAGSDVVVITAGIPRQPGQTRIDLAGDNA 96 (142)
T ss_dssp --------G-GTTCSEEEECCCCCCCTTCCHHHHHHHHH
T ss_pred --------H-hhhcCEEEEecccccccCCchhhHHHHHH
Confidence 1 368999999999643 3345555556654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.17 E-value=0.016 Score=43.83 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=27.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
|+|.|+|++|.+|++++..|..+...+.++.+++..
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~ 36 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA 36 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccc
Confidence 579999999999999998876552234568888764
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.72 E-value=0.012 Score=45.43 Aligned_cols=35 Identities=20% Similarity=0.173 Sum_probs=29.3
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|||+||+|.+|...++.....|.+ |++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~---vi~~~~~ 62 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLK---ILGTAGT 62 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCEEEEEeccccccccccccccccCcc---ccccccc
Confidence 5789999999999999888887777754 8888775
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.71 E-value=0.012 Score=45.47 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=30.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+.+|+|+||+|.+|...++.+...|.+ |++.++++
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~---vi~~~~~~ 62 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLR---VLAAASRP 62 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSG
T ss_pred CCCCEEEEEeccccchhhhhhhhcccccc---cccccccc
Confidence 35789999999999999888877777754 88888764
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.59 E-value=0.018 Score=43.83 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=22.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
.++|.|+||+|++|++++..|+..+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcc
Confidence 5689999999999999999998764
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.53 E-value=0.017 Score=45.33 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=52.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLP 208 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~ 208 (298)
+.+|||+||+|.+|+..++.....|.. +|+..+++.. +....... . ..-.+ .|..++
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~--~vi~~~~~~e------~~~~l~~~------------~-gad~v--i~~~~~ 87 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCS--RVVGICGTQE------KCLFLTSE------------L-GFDAA--VNYKTG 87 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCS--EEEEEESSHH------HHHHHHHH------------S-CCSEE--EETTSS
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCc--ceecccchHH------HHhhhhhc------------c-cceEE--eeccch
Confidence 478999999999999988887777754 3544444311 11111110 0 11122 244444
Q ss_pred CCCCCHHHHHHHh-cCccEEEEcCcccCccccHHH-HhhccccceEEEEeCCcc
Q psy14522 209 GLGLSAADRAVLR-RNVTVVFHGAATVRFDENIKV-AIAINIFGSFVHVSTAYT 260 (298)
Q Consensus 209 ~~gl~~~~~~~l~-~~vd~Vih~A~~~~~~~~~~~-~~~~Nv~g~~v~iSS~~~ 260 (298)
++ .+.+.++. +++|+|+.+.|.- .++. +...+-.|+++.+.++.+
T Consensus 88 ~~---~~~~~~~~~~GvDvv~D~vGg~----~~~~~~~~l~~~G~iv~~G~~s~ 134 (187)
T d1vj1a2 88 NV---AEQLREACPGGVDVYFDNVGGD----ISNTVISQMNENSHIILCGQISQ 134 (187)
T ss_dssp CH---HHHHHHHCTTCEEEEEESSCHH----HHHHHHTTEEEEEEEEEC-----
T ss_pred hH---HHHHHHHhccCceEEEecCCch----hHHHHhhhccccccEEEeccccc
Confidence 31 22333332 2699999999732 2222 223344459998877544
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=94.50 E-value=0.041 Score=41.34 Aligned_cols=76 Identities=11% Similarity=0.107 Sum_probs=51.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
-+|+|.|. |-+|..+++.|.+.|.+ |+++...+. ....+++... ..++.++.||.+++.
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~---v~vId~d~~--~~~~~~~~~~---------------~~~~~vi~Gd~~d~~ 62 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSNDSS 62 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCC---EEEEeccch--hHHHHHHHhh---------------cCCcEEEEccCcchH
Confidence 36888886 89999999999999877 777765432 1122222211 157899999999876
Q ss_pred CCCCHHHHHHH-hcCccEEEEcCc
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGAA 232 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A~ 232 (298)
.+.++ +++++.+|-+..
T Consensus 63 ------~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 63 ------VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp ------HHHHHTTTTCSEEEECSS
T ss_pred ------HHHHhccccCCEEEEccc
Confidence 45554 456888887654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.49 E-value=0.039 Score=42.20 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=28.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+|+|.|+ |.+|...+..+...|.+ |+++++++.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~---vi~~~~~~~ 62 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAE---TYVISRSSR 62 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCE---EEEEESSST
T ss_pred CCCEEEEECC-CCcchhHHHHhhhcccc---ccccccchh
Confidence 5789999986 99999888777777754 888888654
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.49 E-value=0.0054 Score=44.46 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=38.1
Q ss_pred CCCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhcc
Q psy14522 62 GSPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRP 107 (298)
Q Consensus 62 ~~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~ 107 (298)
+.+..++..+.+|| ++|.||+....|..++ ++++|||..|+.++..
T Consensus 21 ~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~ 79 (115)
T d1klpa_ 21 GIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp CCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHH
Confidence 45667788899998 5999999998877655 6789999999988875
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=94.44 E-value=0.02 Score=44.55 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=30.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++.+|||+||+|.+|...++-....|.+ |++++|++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~---vi~~~~~~ 64 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGSD 64 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCE---EEEeCCCH
Confidence 35789999999999999888877777654 89888763
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=94.43 E-value=0.021 Score=44.05 Aligned_cols=101 Identities=10% Similarity=0.051 Sum_probs=59.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+.+|+|+||+|.+|...++.....|.+ |+..++++. +++...+. ..-++ .|..+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~---Vi~~~~s~~------k~~~~~~l--------------Ga~~v--i~~~~ 82 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAK---LIGTVGTAQ------KAQSALKA--------------GAWQV--INYRE 82 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCE---EEEEESSHH------HHHHHHHH--------------TCSEE--EETTT
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCe---EeecccchH------HHHHHHhc--------------CCeEE--EECCC
Confidence 4789999999999999988888778754 888888633 22111110 11122 24444
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCcccCccccHHHH-hhccccceEEEEeCCcc
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVFHGAATVRFDENIKVA-IAINIFGSFVHVSTAYT 260 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vih~A~~~~~~~~~~~~-~~~Nv~g~~v~iSS~~~ 260 (298)
+++ .+++.++.+ ++|+|+.+.+... +... ......|+++.++....
T Consensus 83 ~d~---~~~v~~~t~g~g~d~v~d~~g~~~----~~~~~~~l~~~G~~v~~g~~~~ 131 (179)
T d1qora2 83 EDL---VERLKEITGGKKVRVVYDSVGRDT----WERSLDCLQRRGLMVSFGNSSG 131 (179)
T ss_dssp SCH---HHHHHHHTTTCCEEEEEECSCGGG----HHHHHHTEEEEEEEEECCCTTC
T ss_pred CCH---HHHHHHHhCCCCeEEEEeCccHHH----HHHHHHHHhcCCeeeecccccC
Confidence 441 123444433 5899999987532 2222 22233448877766543
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=94.35 E-value=0.0078 Score=39.95 Aligned_cols=45 Identities=13% Similarity=0.034 Sum_probs=36.2
Q ss_pred CCCccccccCCeEEE-ecCcccchHHHHHHH------------HhhCCChHHhHHhhc
Q psy14522 62 GSPIQEFYRGASVFV-TGGTGFMGKTLTEKL------------LRACPHLERVYLLVR 106 (298)
Q Consensus 62 ~~~~~~~~~~~~ff~-~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~ 106 (298)
+.+..++.++.+|+. +|.||+....++.++ ++.+||++.++.|++
T Consensus 17 ~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~ie 74 (74)
T d1f80d_ 17 GVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQ 74 (74)
T ss_dssp SCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC
T ss_pred CcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHC
Confidence 456678899999985 999999998877555 567899999988764
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=94.22 E-value=0.016 Score=43.84 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=26.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhC-CCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRAC-PHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g-~~v~~V~~l~R~ 165 (298)
|+|.|.||||++|+.+++.|++.. +.+..+..+..+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~ 37 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence 579999999999999999998742 334456555433
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.17 E-value=0.056 Score=40.67 Aligned_cols=37 Identities=27% Similarity=0.448 Sum_probs=30.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+++|.|.|+ |++|++++..|+..+. +.++.++++.+
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~ 41 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANE 41 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecc
Confidence 4678999997 9999999999999864 56788888753
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.10 E-value=0.019 Score=44.47 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=29.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|||+||+|.+|...++.+...|.. |++.+++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~---vi~~~~~ 59 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGS 59 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESS
T ss_pred CCCEEEEECCCCCcccccchhhcccccc---ceeeecc
Confidence 4789999999999999998888788755 7777765
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=94.05 E-value=0.026 Score=42.61 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=30.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.++|.|.|+ |++|+.++..|+..|. +.+|+++++.+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~ 40 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVK 40 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeeccc
Confidence 4678999995 9999999999999963 35799998863
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=93.70 E-value=0.036 Score=43.08 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=52.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhC---CC-cceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEec
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRAC---PH-LERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTG 203 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g---~~-v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 203 (298)
+..+|.||||+|.||++++..|++.. .+ ...+.+++.... ...++...- . +.+ .....+..+..
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~----~~~l~g~~m-d----l~d---~a~~~~~~~~~ 90 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS----FQALEGVAM-E----LED---SLYPLLREVSI 90 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-H----HHT---TTCTTEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc----cchhcchhh-h----hcc---cccccccCccc
Confidence 34579999999999999999888742 11 113444444322 122221110 0 000 01112222111
Q ss_pred CCCCCCCCCCHHHHHHHhcCccEEEEcCccc-CccccHHHHhhccc
Q psy14522 204 DVSLPGLGLSAADRAVLRRNVTVVFHGAATV-RFDENIKVAIAINI 248 (298)
Q Consensus 204 Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~~-~~~~~~~~~~~~Nv 248 (298)
+. .....+++.|+||-.||.. ....+..+++..|.
T Consensus 91 --~~--------~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~ 126 (175)
T d7mdha1 91 --GI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDING 126 (175)
T ss_dssp --ES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHH
T ss_pred --cc--------cchhhccCCceEEEeeccCCCCCCcHHHHHHHHH
Confidence 11 2344568999999999975 34456666666654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=93.69 E-value=0.023 Score=43.91 Aligned_cols=37 Identities=27% Similarity=0.253 Sum_probs=30.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG 168 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~ 168 (298)
+.+|||+||+|.+|...++.....|.. |+..+++...
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~---Viat~~s~~k 60 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYD---VVASTGNREA 60 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCC---EEEEESSSST
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCc---eEEEecCHHH
Confidence 557999999999999998887778766 8888887543
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=93.68 E-value=0.018 Score=43.46 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=32.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
-++|.|.|+.|.+|..+++.|.+.|++ |.+.+|...
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~---V~~~d~~~~ 44 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYP---ISILDREDW 44 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCC---EEEECTTCG
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCC---cEecccccc
Confidence 468999999999999999999999998 888888754
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=93.64 E-value=0.018 Score=43.66 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=31.2
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCc
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKG 168 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~ 168 (298)
|+|.|.|+ |.+|+.++..|.+.|++ |.++.|....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~---V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHE---VQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCc---eEEEEcCHHH
Confidence 68999998 99999999999999987 9999997653
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=93.49 E-value=0.026 Score=44.00 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=29.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+|.|.||||++|..|++.|.++ +++..+.+..++..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~a 38 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYA 38 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTT
T ss_pred eEEEEECCCcHHHHHHHHHHHhC-CCceEEEeeccccC
Confidence 47999999999999999988876 77665666655543
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=93.03 E-value=0.023 Score=44.24 Aligned_cols=35 Identities=26% Similarity=0.507 Sum_probs=27.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
++|.|.||||+.|..|++.|..+ +++..+.+..++
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~s 36 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRH-PHMTITALTVSA 36 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEET
T ss_pred cEEEEECcccHHHHHHHHHHHhC-CCCceEeeEeec
Confidence 57999999999999999988887 775444444443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=92.92 E-value=0.027 Score=44.10 Aligned_cols=39 Identities=18% Similarity=0.350 Sum_probs=29.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+..+|.|.||||+.|..|++.|..+ +++..+.+..++..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~a 42 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKA 42 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTT
T ss_pred CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccC
Confidence 3457999999999999999999887 77655555555433
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=92.81 E-value=0.19 Score=37.85 Aligned_cols=37 Identities=27% Similarity=0.227 Sum_probs=29.4
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.++|.|.|+ |.+|+.++..|...+ +..+++++..++
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~ 42 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKG 42 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccc
Confidence 4678999997 999999998888876 456888877654
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=92.78 E-value=0.087 Score=40.34 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=30.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++|+|+|.|+ |+.+++++..|.+.|. +|+++.|..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~---~i~I~nRt~ 51 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV 51 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccce---EEEeccchH
Confidence 46899999996 8889999999999874 399999974
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=92.69 E-value=0.059 Score=36.96 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+++|+|+|.|. |--|..+++.|.+.|.+ |++.+....
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~---v~~~D~~~~ 39 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVT---PRVMDTRMT 39 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCC---CEEEESSSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCE---EEEeeCCcC
Confidence 46899999997 77799999999999877 788877543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.69 E-value=0.043 Score=41.60 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=22.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRAC 153 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g 153 (298)
.++|.|+||+|.+|++++..|+..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999987653
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=92.32 E-value=0.039 Score=42.89 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=30.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+|||+||+|.+|...++.....|.+ |++++|++.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~---Via~~~~~~ 67 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGRES 67 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGG
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCC---eEEEecchh
Confidence 458999999999999888887777766 888888654
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=91.83 E-value=0.23 Score=36.70 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=28.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|.|.|+ |.+|+.++..|+.++. +.++.++++.+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~ 35 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDK 35 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeccc
Confidence 57888896 9999999999988863 46788888763
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.81 E-value=0.11 Score=39.33 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=29.7
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|.|++|.+|...+..+...|. .+|++..++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~ 62 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVR 62 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESS
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccc
Confidence 467899999999999988888888873 358888775
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=91.72 E-value=0.056 Score=41.82 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=29.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+.+|+|+|+ |.+|...+..+...|. .+|++..+++
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~ 63 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP 63 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence 35789999996 8999988888877774 3688888753
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=91.71 E-value=0.14 Score=38.94 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=30.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
...++|.|.|+ |.+|+.++..|+..|. +.++.++++.
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l-~~ElvLiD~~ 54 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSL-ADELALVDVL 54 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSC
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEec
Confidence 34678999996 9999999999999964 4678888875
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=91.60 E-value=0.14 Score=38.35 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=28.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.|+ |.+|+.++..|+.+|. +.++.++++.+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~ 36 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANE 36 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeccc
Confidence 67889995 9999999999999863 45688887753
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=91.40 E-value=0.25 Score=36.47 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=29.5
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
++|.|.|| |.+|+.++..|+..+. +.++.++++.+.
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~ 36 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEG 36 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEeccccc
Confidence 57889996 9999999999988863 467888888754
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=91.36 E-value=0.59 Score=36.35 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=31.3
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.++++.|.| .|.||+.+++.|..-|.+ |+..++...
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 83 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFN---VLFYDPYLS 83 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECTTSC
T ss_pred eeeCceEEEec-cccccccceeeeeccccc---eeeccCccc
Confidence 36789999998 699999999999888755 888887644
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=91.30 E-value=0.18 Score=38.39 Aligned_cols=34 Identities=18% Similarity=0.038 Sum_probs=30.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.|+|.|.|+ |.+|..++..|.+.|++ |.+++|.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~---V~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQS---VLAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 478999997 99999999999999987 99999863
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=91.15 E-value=0.34 Score=35.85 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=28.4
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
++|.|.|+ |.+|+.++..|+..+. +.++.++++...
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~D~~~~ 37 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKE 37 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeccCC
Confidence 46778897 9999999999998864 567999998764
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=91.09 E-value=0.23 Score=39.08 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=30.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|.|.| .|.||+.+++.|..-|.+ |++.++..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~---V~~~d~~~ 76 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAK---VITYDIFR 76 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhccc---ccccCccc
Confidence 5689999999 799999999999888755 88777654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=91.01 E-value=0.073 Score=40.47 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=27.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+|+|+| +|.+|...+..+...|. +|+++++++
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga---~vi~v~~~~ 60 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGA---FVVCTARSP 60 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcc---cccccchHH
Confidence 467899997 68999988877776764 488888763
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=90.79 E-value=0.39 Score=37.16 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=51.4
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccc----hhHHHHHHHHHHHHhhhhhcCccccCCeEEEe
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKT----VSERLDELFEDRLFSRLKAEVPHFRSKISVVT 202 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~----~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~ 202 (298)
+.++++.|.| .|.||..+++.+..-|.+ |+..++...... ....+++.+.. ..+..+.
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~~~~~~~~~~~~l~ell~~--------------sDii~i~ 103 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGMY---VYFYDIENKLPLGNATQVQHLSDLLNM--------------SDVVSLH 103 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSCCCCCTTCEECSCHHHHHHH--------------CSEEEEC
T ss_pred ccceEEEEee-cccchhhhhhhcccccce---EeeccccccchhhhhhhhhhHHHHHhh--------------ccceeec
Confidence 5688999986 799999999998887655 888877543211 11123333332 4666666
Q ss_pred cCCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy14522 203 GDVSLPGLGLSAADRAVLRRNVTVVFHGAAT 233 (298)
Q Consensus 203 ~Dl~~~~~gl~~~~~~~l~~~vd~Vih~A~~ 233 (298)
+.++....++--++.-..++. +.++=|.+.
T Consensus 104 ~plt~~T~~li~~~~l~~mk~-~a~lIN~aR 133 (188)
T d1sc6a1 104 VPENPSTKNMMGAKEISLMKP-GSLLINASR 133 (188)
T ss_dssp CCSSTTTTTCBCHHHHHHSCT-TEEEEECSC
T ss_pred ccCCcchhhhccHHHHhhCCC-CCEEEEcCc
Confidence 677665544433333333333 333334443
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=90.51 E-value=0.26 Score=37.61 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=29.0
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|+|.|+ |+.++.++..|.+.+ .+|+++.|..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~ 51 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 51 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchH
Confidence 46889999986 777999999998753 4699999974
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=90.44 E-value=0.12 Score=39.34 Aligned_cols=97 Identities=15% Similarity=0.127 Sum_probs=53.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVS 206 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 206 (298)
..+.+|+|.|+ |.+|...++.+...|.+ +++++++....+ ... .+ ..-.++ |..
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~---~i~~~~~~~~~~---~a~-~l----------------Gad~~i--~~~ 82 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAH---VVAFTTSEAKRE---AAK-AL----------------GADEVV--NSR 82 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSGGGHH---HHH-HH----------------TCSEEE--ETT
T ss_pred CCCCEEEEecc-chHHHHHHHHhhccccc---chhhccchhHHH---HHh-cc----------------CCcEEE--ECc
Confidence 35789999986 88999888777777654 666766533211 111 11 111222 322
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcccCccccHHHHh-hccccceEEEEeCC
Q psy14522 207 LPGLGLSAADRAVLRRNVTVVFHGAATVRFDENIKVAI-AINIFGSFVHVSTA 258 (298)
Q Consensus 207 ~~~~gl~~~~~~~l~~~vd~Vih~A~~~~~~~~~~~~~-~~Nv~g~~v~iSS~ 258 (298)
+.. ......+++|++|.+.+... .+...+ -..-.|+++.++..
T Consensus 83 ~~~------~~~~~~~~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G~~ 126 (168)
T d1uufa2 83 NAD------EMAAHLKSFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVGAP 126 (168)
T ss_dssp CHH------HHHTTTTCEEEEEECCSSCC---CHHHHHTTEEEEEEEEECCCC
T ss_pred hhh------HHHHhcCCCceeeeeeecch---hHHHHHHHHhcCCEEEEeccC
Confidence 222 34444467999999987432 233222 22333488887643
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.28 E-value=0.26 Score=38.16 Aligned_cols=37 Identities=27% Similarity=0.304 Sum_probs=31.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+++|.|.| .|.||+.+++.+..-|.+ |+..+|...
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~---v~~~d~~~~ 76 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGAQ---VRGFSRTPK 76 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTCE---EEEECSSCC
T ss_pred ccCceEEEec-cccccccceeeeeccccc---ccccccccc
Confidence 6789999999 588999999999988765 888888643
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=90.07 E-value=1.1 Score=33.04 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=28.3
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+|.|.|+ |.+|++++..|+.+|. +.++.++++.+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~ 36 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAK 36 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEecc
Confidence 36788896 9999999999999864 46788888753
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=90.02 E-value=0.36 Score=33.91 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=29.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
+++|+|+|.|+ |.+|..-++.|++.|.+ |+++...
T Consensus 10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~---v~v~~~~ 44 (113)
T d1pjqa1 10 LRDRDCLIVGG-GDVAERKARLLLEAGAR---LTVNALT 44 (113)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBE---EEEEESS
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEecc
Confidence 67999999995 88999999999999865 6666554
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.94 E-value=0.26 Score=34.87 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=28.9
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|...
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~---Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTK---VTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccE---EEEEEecce
Confidence 468889885 99999999999999866 777777643
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=89.86 E-value=0.29 Score=34.89 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=28.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.|| |+||..++..|.+.|.+ |.++.|..
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~---Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAE---VTVLEAMD 55 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCc---eEEEEeec
Confidence 467899985 99999999999999876 77777764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=89.25 E-value=0.24 Score=37.77 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=55.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
.+.+|+|.|+ |.+|...+..+...|.. +|++..+++ +|++...+. ...+++ |..+
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~--~v~~~~~~~------~k~~~a~~~--------------Ga~~~i--~~~~ 82 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGAS--IIIAVDIVE------SRLELAKQL--------------GATHVI--NSKT 82 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCS--EEEEEESCH------HHHHHHHHH--------------TCSEEE--ETTT
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccc--eeeeeccHH------HHHHHHHHc--------------CCeEEE--eCCC
Confidence 5778999997 99999988888788755 466665542 222221110 112233 3333
Q ss_pred CCCCCCHHHHHHHhc-CccEEEEcCcccCccccHHHHhhccccceEEEEeC
Q psy14522 208 PGLGLSAADRAVLRR-NVTVVFHGAATVRFDENIKVAIAINIFGSFVHVST 257 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~-~vd~Vih~A~~~~~~~~~~~~~~~Nv~g~~v~iSS 257 (298)
.++ .+++.++.. ++|++|.+.+........ +.-+.-.|++++++.
T Consensus 83 ~~~---~~~i~~~t~gg~D~vid~~G~~~~~~~~--~~~~~~~G~i~~~G~ 128 (174)
T d1f8fa2 83 QDP---VAAIKEITDGGVNFALESTGSPEILKQG--VDALGILGKIAVVGA 128 (174)
T ss_dssp SCH---HHHHHHHTTSCEEEEEECSCCHHHHHHH--HHTEEEEEEEEECCC
T ss_pred cCH---HHHHHHHcCCCCcEEEEcCCcHHHHHHH--HhcccCceEEEEEee
Confidence 331 233444433 599999998853221111 112233448888764
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=89.24 E-value=0.45 Score=37.22 Aligned_cols=36 Identities=19% Similarity=0.125 Sum_probs=30.3
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+.+++|.|.| .|.||+.+++.|..-|.+ |++.++..
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~ 78 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAK---VIAYDPYP 78 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred ccceeeeeee-ccccccccccccccccee---eeccCCcc
Confidence 5688999998 699999999999888765 88888754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=89.13 E-value=0.28 Score=34.91 Aligned_cols=34 Identities=18% Similarity=0.386 Sum_probs=28.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.|| |++|..++..|...|.+ |.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~---Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGID---SYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCE---EEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhcccc---ceeeehhc
Confidence 478888885 99999999999998766 88888864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=88.94 E-value=0.22 Score=36.88 Aligned_cols=35 Identities=26% Similarity=0.334 Sum_probs=28.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
++|.|.|+ |.+|..++..|+..+ +..+.+++..++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~ 36 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEG 36 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccc
Confidence 57888896 999999999988885 456888887654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=88.80 E-value=0.19 Score=38.29 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=30.5
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++++|+|.|+ |+.|++++..|.+.|. .+|+++.|+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~ 51 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNV 51 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccH
Confidence 4788999996 9999999999999983 4689999974
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=88.67 E-value=0.083 Score=39.91 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=24.9
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEec
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLV 163 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~ 163 (298)
-+|.|.||||++|..|++.|.++...+.++..+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 3799999999999999987766532344555443
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.65 E-value=0.4 Score=34.21 Aligned_cols=35 Identities=34% Similarity=0.543 Sum_probs=28.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~---Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYH---VKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCE---EEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccce---EEEEecccc
Confidence 467888874 99999999999999866 777777654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.53 E-value=0.56 Score=33.45 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=27.2
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|+
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~lG~~---Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGIGLD---VTVMVRS 52 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCeEEEECC-CccHHHHHHHHhhcCCe---EEEEEec
Confidence 357888885 99999999999999977 6666665
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.47 E-value=0.18 Score=37.72 Aligned_cols=36 Identities=33% Similarity=0.388 Sum_probs=30.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+|+|+|.|| |+.|..++..|.+.+++ .+|+++.+.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~-~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPS-IEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTT-SEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCC-CcEEEEECCC
Confidence 789999995 99999999999999876 4678877664
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=88.39 E-value=0.19 Score=38.89 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=28.0
Q ss_pred cCceeee-cCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFV-TGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLV-TGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+++| +||+|.+|...++-....|.+ |++.+|..+
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~---vI~~v~~~~ 65 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFN---SISVIRDRP 65 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCE---EEEEECCCT
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCe---EEEEEeccc
Confidence 3555555 799999999888877777755 888887654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.17 E-value=0.34 Score=34.76 Aligned_cols=34 Identities=15% Similarity=0.321 Sum_probs=29.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.|+++|.|| |++|..++..|.+.|.+ |.++.|..
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~---Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSK---TSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcE---EEEEeecc
Confidence 368889985 89999999999999866 88888874
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.82 E-value=0.68 Score=35.30 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+|+|+|.|.+.-+|+-++..|.++|.. |+.+..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gat---Vt~~~~ 71 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCHS 71 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred cccceEEEEecCCccchHHHHHHHhccCc---eEEEec
Confidence 57999999999999999999999998754 666544
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.70 E-value=1.1 Score=33.67 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=29.9
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
+...+|.|.|+ |.+|..++..|+..|. +.++.++++..
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~ 54 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADT 54 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCc
Confidence 34557888896 9999999999998864 46788888753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=87.66 E-value=0.4 Score=36.51 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=29.2
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+.+|+|+|.|.+.-+|+-++..|.++|.. |+.+..
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gat---Vt~~h~ 69 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTHR 69 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEECS
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcc---cccccc
Confidence 57999999999999999999988888754 665543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=87.41 E-value=0.24 Score=35.60 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=28.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..++|+|.| .|++|..++..|.+.|.+ |.++.|..
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~---Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKK---VTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceE---EEEEEecC
Confidence 467888887 499999999999999876 77776654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=87.34 E-value=0.81 Score=34.30 Aligned_cols=36 Identities=22% Similarity=0.090 Sum_probs=27.6
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.+.+|+|.|+ |.+|...+..+...|.. +|++..+++
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~--~vi~~~~~~ 63 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGAS--RIIGVDINK 63 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS--EEEEECSCG
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcC--ceEEEcccH
Confidence 4778999997 57899888888888743 577777654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=87.26 E-value=0.52 Score=35.64 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=29.0
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.+.+|+|.|+ |.+|...+..+...|. .+|++..+++.
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~--~~Vi~~~~~~~ 64 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGA--ARIIGVDINKD 64 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCC--ceEEeecCcHH
Confidence 5789999999 6688888888888763 46888888654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.18 E-value=0.5 Score=33.74 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=28.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|.+
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~---Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSK---VTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcc---eeEEEecc
Confidence 468899985 99999999999999876 88877764
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.04 E-value=0.15 Score=39.85 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=30.6
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
-++|.|.|| |.+|+.++..++..|++ |+++++++.
T Consensus 4 IkkvaViGa-G~mG~~iA~~~a~~G~~---V~l~D~~~~ 38 (192)
T d1f0ya2 4 VKHVTVIGG-GLMGAGIAQVAAATGHT---VVLVDQTED 38 (192)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCHH
T ss_pred eEEEEEECc-CHHHHHHHHHHHhCCCc---EEEEECChH
Confidence 368999997 99999999999999987 999988753
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=86.92 E-value=0.28 Score=37.46 Aligned_cols=36 Identities=22% Similarity=0.087 Sum_probs=27.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
..+.+|+|.|+ |.+|...+..+...|. .+|++.+++
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~ 61 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSR 61 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCC
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccch
Confidence 35778999986 9999988777777764 348888775
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=86.69 E-value=0.17 Score=38.10 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=28.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|.|.|. |.+|+.+++.|.+.|++ |++++|++
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~---V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHY---LIGVSRQQ 33 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCE---EEEEECCc
Confidence 56888875 99999999999999877 88888863
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=86.68 E-value=0.76 Score=35.41 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=30.7
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.++++.|.| .|.||+.+++.|..-|.+ |+..+|...
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 78 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVH---LHYTDRHRL 78 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTCE---EEEECSSCC
T ss_pred ccccceeecc-ccccchhhhhhhhccCce---EEEEeeccc
Confidence 5688999998 799999999999888765 888887643
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=86.27 E-value=0.21 Score=35.89 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=29.1
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..++++|.|| |++|..++..|.+.|.+ |.++.|.+
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~---Vtli~~~~ 63 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVH---VSLVETQP 63 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccce---EEEEeecc
Confidence 3578888885 99999999999999866 88787764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.11 E-value=0.41 Score=36.13 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=27.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+.+|+|.|+ |.+|...+..+...|. .+|++.++.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~ 60 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLS 60 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCC
Confidence 4678999986 9999988888877774 358888775
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=85.94 E-value=0.19 Score=40.63 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=31.6
Q ss_pred hhcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 126 FYRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 126 ~~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
.+++++|+|.| .|.+|++++..|...| |.++++++.+
T Consensus 27 kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D 63 (247)
T d1jw9b_ 27 ALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFD 63 (247)
T ss_dssp HHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCC
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCc
Confidence 35678999999 6889999999999999 6788888765
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=85.83 E-value=0.2 Score=36.16 Aligned_cols=69 Identities=19% Similarity=0.181 Sum_probs=44.7
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSLPG 209 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~~~ 209 (298)
|.++|.|. |-+|..+++.|.. .+ |.++...+.. .+... ..++.++.||.++++
T Consensus 1 kHivI~G~-g~~g~~l~~~L~~--~~---i~vi~~d~~~------~~~~~---------------~~~~~~i~Gd~~~~~ 53 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELRG--SE---VFVLAEDENV------RKKVL---------------RSGANFVHGDPTRVS 53 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSCG--GG---EEEEESCTTH------HHHHH---------------HTTCEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHcC--CC---CEEEEcchHH------HHHHH---------------hcCccccccccCCHH
Confidence 56888885 7789999999843 34 6666654331 11111 147889999998875
Q ss_pred CCCCHHHHHHH-hcCccEEEEcC
Q psy14522 210 LGLSAADRAVL-RRNVTVVFHGA 231 (298)
Q Consensus 210 ~gl~~~~~~~l-~~~vd~Vih~A 231 (298)
.+.++ +++.+.++-+.
T Consensus 54 ------~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 54 ------DLEKANVRGARAVIVNL 70 (129)
T ss_dssp ------HHHHTTCTTCSEEEECC
T ss_pred ------HHHHhhhhcCcEEEEec
Confidence 45543 34677777554
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=85.67 E-value=0.62 Score=32.81 Aligned_cols=68 Identities=12% Similarity=0.064 Sum_probs=46.9
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCCccchhHHHHHHHHHHHHhhhhhcCccccCCeEEEecCCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKKGKTVSERLDELFEDRLFSRLKAEVPHFRSKISVVTGDVSL 207 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~~ 207 (298)
...+|.|.| .|.||+-++....+.|.+ |++++.+++.... .-.-.++.+|+.+
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~---v~v~d~~~~~PA~-----------------------~va~~~i~~~~~d 62 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVE---VIAVDRYADAPAM-----------------------HVAHRSHVINMLD 62 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCE---EEEEESSTTCGGG-----------------------GGSSEEEECCTTC
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCE---EEEEcCCCCCchh-----------------------hcCCeEEECCCCC
Confidence 456799999 699999999998888876 8888876543211 0112467788887
Q ss_pred CCCCCCHHHHHHHhc--CccEEE
Q psy14522 208 PGLGLSAADRAVLRR--NVTVVF 228 (298)
Q Consensus 208 ~~~gl~~~~~~~l~~--~vd~Vi 228 (298)
.+ .+..+.. .+|+|.
T Consensus 63 ~~------~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 63 GD------ALRRVVELEKPHYIV 79 (111)
T ss_dssp HH------HHHHHHHHHCCSEEE
T ss_pred HH------HHHHHHHhhCCceEE
Confidence 65 5666553 568774
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.42 E-value=0.62 Score=33.21 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=29.4
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|.+.
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~---Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSE---VTVVEFASE 59 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCE---EEEECSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCe---EEEEEEccc
Confidence 468889985 99999999999999866 888888653
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=85.33 E-value=1.3 Score=33.50 Aligned_cols=38 Identities=21% Similarity=0.097 Sum_probs=30.5
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
..+.+|+|.|+ |.+|...+..+...|. .+|++.+++..
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~--~~Vi~~d~~~~ 63 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHKD 63 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGG
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCC--ceeeccCChHH
Confidence 35789999985 9999999998888874 46888888643
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=84.95 E-value=1.1 Score=33.83 Aligned_cols=37 Identities=19% Similarity=0.103 Sum_probs=28.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..+.+|+|.|+ |.+|...+..+...|.. +|++..+++
T Consensus 27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~--~Vi~~d~~~ 63 (174)
T d1e3ia2 27 TPGSTCAVFGL-GCVGLSAIIGCKIAGAS--RIIAIDING 63 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSCG
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHHhCCc--eeeeeccch
Confidence 35788999985 99999988888888743 577777754
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=84.37 E-value=1.5 Score=33.77 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=29.8
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.++++.|.| .|.||+.+++.+..-|.+ |+..++...
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 81 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFDMD---IDYFDTHRA 81 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECSSCC
T ss_pred ecccceEEee-cccchHHHHHHHHhhccc---ccccccccc
Confidence 4689999998 699999999998888765 777776543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=84.15 E-value=0.37 Score=36.24 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=29.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|+|.| .|.+|..+++.|.+.|+. .+|+..+|++
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~-~~I~~~D~~~ 36 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINP 36 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCC-eEEEEEECCh
Confidence 4688997 699999999999999875 4688888763
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=84.03 E-value=0.21 Score=32.85 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=36.3
Q ss_pred CCCccccccCCeEE-EecCcccchHHHHHHH------------HhhCCChHHhHHhhccC
Q psy14522 62 GSPIQEFYRGASVF-VTGGTGFMGKTLTEKL------------LRACPHLERVYLLVRPK 108 (298)
Q Consensus 62 ~~~~~~~~~~~~ff-~~Gg~sl~~~~l~~~l------------l~~~ptv~~l~~~i~~~ 108 (298)
+.+..++.++.+|. .+|.||+....++..+ +...+||+.+..|+..+
T Consensus 16 ~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~ 75 (77)
T d1t8ka_ 16 GVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 75 (77)
T ss_dssp TCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred CCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHc
Confidence 44667788899997 4999999998876555 45678999988887653
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=83.30 E-value=1.5 Score=30.59 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=28.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.|| |++|..++..|.+.|.....|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 468999997 9999999988877664434588887764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.18 E-value=0.18 Score=37.45 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=29.1
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVR 164 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R 164 (298)
+++|+|||.|| |.+|..-++.|++.|.+ |+++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~---VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCK---LTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCE---EEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeC
Confidence 67999999998 88999999999999866 666643
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=83.16 E-value=0.34 Score=36.31 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=27.5
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.|+|.|.|+||.||...++-+.+. ++--+|+.+.-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCC
Confidence 489999999999999988877665 4334566665443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=82.93 E-value=0.39 Score=33.95 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=28.3
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.|| |++|..++..|.+.|.+ |.++.|.+
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~---Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAK---THLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccE---EEEEeecc
Confidence 367888884 99999999999999866 88888864
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.86 E-value=1.3 Score=33.86 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=29.6
Q ss_pred hcCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 127 YRGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 127 ~~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.++++.|.| .|.||+.+++.+..-|.+ |+..+|...
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~---v~~~d~~~~ 78 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAY---VVAYDPYVS 78 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECTTSC
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccce---EEeecCCCC
Confidence 5678888888 699999999998877654 888877643
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=82.83 E-value=0.26 Score=38.12 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=29.8
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
-++|.|.|+ |.+|+.++..++..|++ |+++++++
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~---V~l~D~~~ 37 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTP---ILMKDINE 37 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCC---EEEECSSH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 367999997 99999999999999988 89998864
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.68 E-value=0.42 Score=33.63 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=28.1
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
.++++|.| .|++|..++..|.+.|.+ |.++.|.+
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~---Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQ---VSVVEARE 54 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCE---EEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccc---eEEEeeec
Confidence 36788887 499999999999999876 88887764
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=82.45 E-value=1.3 Score=32.87 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=28.0
Q ss_pred CceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCCC
Q psy14522 129 GASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPKK 167 (298)
Q Consensus 129 ~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~~ 167 (298)
+.+|.|.|+ |.+|+.++..|...+ +..+.++++...
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~ 38 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKN 38 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCC
Confidence 457888995 999999997776664 567888888654
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=81.45 E-value=0.45 Score=34.52 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=29.2
Q ss_pred cCceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 128 RGASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 128 ~~k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
..++++|.|| |++|..++..|.+.|.+ |.++.+.+
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~---Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMH---VTLLDTAA 68 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcc---eeeeeecc
Confidence 3678999984 99999999999999866 78777764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=81.39 E-value=5.3 Score=26.82 Aligned_cols=39 Identities=21% Similarity=0.159 Sum_probs=28.7
Q ss_pred hhhhcCceeeecCCCCCCc-hhHHHHHHHhCCCcceEEEecCCC
Q psy14522 124 REFYRGASVFVTGGTGFMG-KTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 124 ~~~~~~k~vLVTGatG~iG-~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|...+.|+|.+.|-.| +| +.|++.|.++|+. |...++..
T Consensus 3 ~~~~~~~~ihfiGigG-~GMs~LA~~L~~~G~~---VsGSD~~~ 42 (96)
T d1p3da1 3 PEMRRVQQIHFIGIGG-AGMSGIAEILLNEGYQ---ISGSDIAD 42 (96)
T ss_dssp CCCTTCCEEEEETTTS-TTHHHHHHHHHHHTCE---EEEEESCC
T ss_pred ccchhCCEEEEEEECH-HHHHHHHHHHHhCCCE---EEEEeCCC
Confidence 3445678888887543 44 6789999999987 88887764
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.06 E-value=0.59 Score=36.36 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=27.6
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRP 165 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~ 165 (298)
|+|.|.| .|++|..++..|++.|++ |++++.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~---V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHE---VIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCc---EEEEeCC
Confidence 5678885 799999999999999877 8998865
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=80.32 E-value=0.34 Score=40.68 Aligned_cols=33 Identities=39% Similarity=0.594 Sum_probs=28.5
Q ss_pred ccccCCeEEEecCcccchHHHHHHHHhhCCChH
Q psy14522 67 EFYRGASVFVTGGTGFMGKTLTEKLLRACPHLE 99 (298)
Q Consensus 67 ~~~~~~~ff~~Gg~sl~~~~l~~~ll~~~ptv~ 99 (298)
+|+.+.-+|.|||+|++|..|++.|+.....|.
T Consensus 4 ~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~ 36 (356)
T d1rkxa_ 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVK 36 (356)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred hhhCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999998754433
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=80.19 E-value=0.69 Score=34.49 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=28.1
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
|+|-|.| .|.+|+.+++.|++.|++ |++.+|.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~---V~~~d~~~ 33 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYS---LVVSDRNP 33 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCe---EEEEeCCc
Confidence 4677776 699999999999999987 88888863
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.07 E-value=0.69 Score=34.58 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=27.8
Q ss_pred ceeeecCCCCCCchhHHHHHHHhCCCcceEEEecCCC
Q psy14522 130 ASVFVTGGTGFMGKTLTEKLLRACPHLERVYLLVRPK 166 (298)
Q Consensus 130 k~vLVTGatG~iG~~l~~~Ll~~g~~v~~V~~l~R~~ 166 (298)
++|-+.| .|.+|+.+++.|++.|++ |++.+|..
T Consensus 2 ~kIg~IG-lG~MG~~iA~~L~~~g~~---v~~~d~~~ 34 (162)
T d3cuma2 2 KQIAFIG-LGHMGAPMATNLLKAGYL---LNVFDLVQ 34 (162)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CEEEEEE-EHHHHHHHHHHHHHCCCe---EEEEECch
Confidence 4577776 799999999999999987 88888863
|